Citrus Sinensis ID: 009464

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530----
Protein Sequence
MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY
Secondary Structure (PSIPRED)
cccccEEEEccccEEcccccccccEEEEEEEcccHHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHccccccccEEEEEEcccccccccHHHHHHHHHHcccccEEEEcccccHHHHHHHHccccccEEEEccccHHHHHHHcccccHHHHHcccccEEEEEccccEEEEEcccHHHHHHHHHHHHcccccccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHcccccccccccccccccccEEEEccccccccccccccccccccccccEEEEEcccccccHHHHHHHHcccEEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccEEEEccccccHHHHcccccEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHccccEEEEEEEccccccccccHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHEcccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEEEcccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHcccccEEEEccccccHHHHHccEEcHHHHHHccccEEEEccccccEEccccHHHHHHHHHHHHccccccccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHcccccccHHHHHHcccccccEEEEEcccccccccccccccHHHcccccEEEEEEEcccccHHHHHHHHcccEEEcHHHHHHHHHHHHHHHHccccccHHHHHHHHHcc
Coil and Loop (DISEMBL)
mespnllvasgsklvsggmrknptlicvpimgeSVDKMVVDMGKANASGADLVEIRLdglknfnpreniktlikespvptlftyrpiweggqydgdeneRVDVLRLAMELGADYIDVELQVAREFNdsirgkkpekcKVIVSshnyqytpsveDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAkfggfltfgtlengivsapgqptiKDLLDLYnfrqmgpdtkvfgiigkpvghskspilyneafksvgfNGVFVHLLVDDIAKFFQtyssndfagfsctiphkeaavkccDEVDTVAKSIGAVNciirrqsdgklfgyntdyvGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGghalsladlenfnpedgmilanttsigmqpkvdetpipkhalgHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYerftglpapkELFQKIMAKY
Flexible Loop (DISEMBL)
mespnllvasgsklvsggmrknpTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGlknfnpreniktlikespvptlFTYRpiweggqydgdeNERVDVLRLAMELGADYIDVELQVAREfndsirgkkpekCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKsigavnciirrqsdgklfgYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALaygakakgarVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY
Low Complexity Region (SEG)
MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIgaggagkalaygakakgaRVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY
Disordered region (IsUnstruct)
*********************NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP***********
Disordered Region (DISOPRED)
*****LL**************N*TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTL***********TIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY
Disordered Region (DISEMBL)
MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY
Disordered Region (DISPRO)
***PNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR******VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	534	2.2.26 [Sep-21-2011]
Q9SQT8	603	Bifunctional 3-dehydroqui	yes	no	0.994	0.880	0.740	0.0
Q46DZ6	280	Shikimate dehydrogenase O	yes	no	0.486	0.928	0.378	2e-41
Q6HDI8	277	Shikimate dehydrogenase O	yes	no	0.494	0.953	0.357	7e-41
B7JNW6	277	Shikimate dehydrogenase O	yes	no	0.494	0.953	0.357	9e-41
C3L5T8	277	Shikimate dehydrogenase O	yes	no	0.494	0.953	0.357	9e-41
Q74ZZ1	1577	Pentafunctional AROM poly	yes	no	0.895	0.303	0.275	1e-40
A0RIV1	277	Shikimate dehydrogenase O	yes	no	0.494	0.953	0.354	2e-40
Q634K8	277	Shikimate dehydrogenase O	yes	no	0.494	0.953	0.354	2e-40
A9VHW1	277	Shikimate dehydrogenase O	yes	no	0.488	0.942	0.359	3e-40
Q730K1	277	Shikimate dehydrogenase O	yes	no	0.496	0.956	0.352	3e-40

>sp|Q9SQT8|DHQSD_ARATH Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=EMB3004 PE=1 SV=1

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/539 (74%), Positives = 459/539 (85%), Gaps = 8/539 (1%)

Query: 1   MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
           ME  N+ VAS S   ++ S  + KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRL
Sbjct: 68  MEPSNVYVASNSTEMEIGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRL 127

Query: 58  DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
           D LK+FNP E++KT+IK+SP+PTLFTYRP WEGGQY+GDENER DVLRLAMELGADYIDV
Sbjct: 128 DWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDV 187

Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
           ELQVA EF  SI GKKP K KVIVSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+
Sbjct: 188 ELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAV 247

Query: 178 DITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQ 237
           DI DVAR+F IT  +QV   P IGLVMGERGL+SRILC+KFGG+LTFGTL++  VSAPGQ
Sbjct: 248 DIADVARMFHITSKAQV---PTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQ 304

Query: 238 PTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA 297
           PTIKDLLDLYNFR++GPDTKV+GIIGKPV HSKSPI++N+AFKSV FNGV+VHLLVD++ 
Sbjct: 305 PTIKDLLDLYNFRRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLV 364

Query: 298 KFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDY 357
            F Q YSS+DFAGFSCTIPHKEAA++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD 
Sbjct: 365 SFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDC 424

Query: 358 VGAISAIEDGLR--GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR 415
           +G+ISAIEDGLR  G  +     SS LA K  VVIGAGGAGKALAYGAK KGA+VVIANR
Sbjct: 425 IGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANR 484

Query: 416 TYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL 475
           TY+RA ELAE +GG ALSL DL+N++PEDGM+LANTTS+GMQP V+ETPI K AL HYAL
Sbjct: 485 TYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYAL 544

Query: 476 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
           VFDAVYTP+ITRLLREAEESGA  VSG EMF+ QAYEQ+E FTGLPAPKEL+ +IM+KY
Sbjct: 545 VFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIMSKY 603

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 5

>sp|Q46DZ6|AROE_METBF Shikimate dehydrogenase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=aroE PE=3 SV=1

 Score =  170 bits (431), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 158/283 (55%), Gaps = 23/283 (8%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 314
           +VFG+ G P+ HS SP ++N AF ++G + ++    V  + + K      +  F G + T
Sbjct: 3   QVFGVFGDPIAHSLSPAMHNAAFSALGMDCIYHAFRVKPEKLEKAILGAEAMGFGGLNLT 62

Query: 315 IPHKEAAVKC-CDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 373
           +P KE A+K  C + D +A+ IGAVN I+  ++ G++ GYNTD +GA  A+++       
Sbjct: 63  VPLKETALKLDCIKPDPLAEKIGAVNTIVFGET-GEIKGYNTDGLGAKQALQNS------ 115

Query: 374 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 433
                +  + G   VV GAGGA +++A+   A GA + I NRT  RA ELA+ +   +LS
Sbjct: 116 -----AVEMEGSKIVVTGAGGAARSIAFQLAADGAEITIVNRTEGRAIELAKDISAASLS 170

Query: 434 -------LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 486
                  L+ L+N   +D  IL NTT++GM P VD        L     VFD VY P  T
Sbjct: 171 GNVTGKGLSGLKNL-LQDANILINTTTLGMHPNVDTAIATAEDLHPDLTVFDIVYNPLET 229

Query: 487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 529
           RLLREA+ SGA  VSG+ M + Q  E ++ +TG+  P EL +K
Sbjct: 230 RLLREAKASGAKTVSGVLMLVYQGAEAFKLWTGIEPPVELMKK 272

Methanosarcina barkeri (strain Fusaro / DSM 804) (taxid: 269797)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q6HDI8|AROE_BACHK Shikimate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=aroE PE=3 SV=1

 Score =  169 bits (427), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 171/285 (60%), Gaps = 21/285 (7%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 431
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 432 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 489
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 490 REAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 533
            EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++ K
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRK 274

Bacillus thuringiensis subsp. konkukian (strain 97-27) (taxid: 281309)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|B7JNW6|AROE_BACC0 Shikimate dehydrogenase OS=Bacillus cereus (strain AH820) GN=aroE PE=3 SV=1

 Score =  168 bits (426), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 171/285 (60%), Gaps = 21/285 (7%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 431
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 432 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 489
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 490 REAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 533
            EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++ K
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRK 274

Bacillus cereus (strain AH820) (taxid: 405535)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|C3L5T8|AROE_BACAC Shikimate dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=aroE PE=3 SV=1

 Score =  168 bits (426), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 171/285 (60%), Gaps = 21/285 (7%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   RLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 431
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 432 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 489
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 490 REAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 533
            EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++ K
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRK 274

Bacillus anthracis (strain CDC 684 / NRRL 3495) (taxid: 568206)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q74ZZ1|ARO1_ASHGO Pentafunctional AROM polypeptide OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ARO1 PE=3 SV=2

 Score =  167 bits (424), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 258/527 (48%), Gaps = 49/527 (9%)

Query: 21   KNPTLICVPIMGESVDKMVVDMGKANAS--GADLVEIRLDGLKNFNPRENIKTL----IK 74
            K  T +C+     +   ++ +M +   +  G + VE+R+D L+N++    +K L    + 
Sbjct: 1065 KRSTFVCL-----TFQNLLPEMERIKEAVYGCEAVEVRVDHLENYSQDFVLKQLTALRLA 1119

Query: 75   ESPVPTLFTYRPIWEGGQY-DGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKK 133
               +P +FT R   +GG++ D D +   D+L + ++ G +++D+EL +    +  I  K+
Sbjct: 1120 TDSLPIVFTIRTKKQGGKFLDNDYSTLEDLLTVGLKAGVEFLDLELTLPSPIHQRILNKR 1179

Query: 134  PEKCKVIVSSHNY--QYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH 191
              K ++I S H++  +++    +  +  A+  A   D +KF  TA    D   + +    
Sbjct: 1180 -YKTRIIGSHHDFSGEFSWEHPEWEHRYAQALAMQVDAIKFVATAKGFGDNLSLEEF--R 1236

Query: 192  SQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY-NFR 250
            S+ +  P+I + M E G +SR+L       +T   L     +APGQ T++ + +LY +  
Sbjct: 1237 SKHTDKPLIAINMRECGKLSRVLNTILTP-ITSDVLPQA--AAPGQLTLRQINELYASIG 1293

Query: 251  QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT-YSSNDFA 309
             + P  K+F ++G P+GHS+SPIL+N  + S+G    F     D      ++  S  D  
Sbjct: 1294 GLRPK-KMF-VVGSPIGHSRSPILHNTGYNSLGLPYTFDKFETDSAEIVKKSLLSREDLG 1351

Query: 310  GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGL 368
            G + TIP K+  ++  DE+   AK IGAVN II ++ DG+  G+NTD++G   S I +G+
Sbjct: 1352 GIAVTIPLKQDIMQYLDELTDSAKCIGAVNTIIPKK-DGRFIGHNTDWLGIKNSLIANGV 1410

Query: 369  RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETV 427
               +N +G           +++G+GG  +A AY   + + + + + NRT     EL ++ 
Sbjct: 1411 PEHVNTAG-----------LIVGSGGTARAAAYAFHEMQCSTIYMINRTTSNLTELQKSF 1459

Query: 428  GG----HAL-SLADLENFNPEDGMILANTTS-----IGMQPKVDETPIPKHALGHYALVF 477
                  H + SL  +E  +   G+ ++   S       +  K+        A      + 
Sbjct: 1460 PQEFNIHVIESLEQIEQLSEPVGIAVSCVPSDKPLDDALSQKLSAFLSRPSATNFIPTIL 1519

Query: 478  DAVYTPKITRLLREAEE-SGATIVSGLEMFIGQAYEQYERFTGLPAP 523
            DA Y P +T +L+ A E  G   VSG +M + Q   Q+E +TG  AP
Sbjct: 1520 DAAYKPLVTPVLKLASEVHGWRPVSGAQMLVHQGVAQFEIWTGFKAP 1566

The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|A0RIV1|AROE_BACAH Shikimate dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam) GN=aroE PE=3 SV=1

 Score =  167 bits (422), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 171/285 (60%), Gaps = 21/285 (7%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
            PHK A +   DE+D +AK IGAVN ++ +  +GKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLIGYNTDGIGFVRALQ-------SI 113

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 431
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 432 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 489
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 490 REAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 533
            EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++ K
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRK 274

Bacillus thuringiensis (strain Al Hakam) (taxid: 412694)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q634K8|AROE_BACCZ Shikimate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=aroE PE=3 SV=1

 Score =  167 bits (422), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 171/285 (60%), Gaps = 21/285 (7%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 431
           S   +  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---NEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 432 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 489
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 490 REAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 533
            EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++ K
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRK 274

Bacillus cereus (strain ZK / E33L) (taxid: 288681)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|A9VHW1|AROE_BACWK Shikimate dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=aroE PE=3 SV=1

 Score =  166 bits (421), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/284 (35%), Positives = 166/284 (58%), Gaps = 23/284 (8%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           +++G+IG P+GHS SP+++N+AF+ +  +  ++  LV++  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYLAFLVEEEALGEAVKGLKALGISGFNVT 62

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
            PHK A ++  DE+  +A+ IGAVN ++ R  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 429
           S      L  K  ++IGAGGA +A+ +     G + + IANRT D+A+ L     E V  
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENVNS 170

Query: 430 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 488
           HALSL    EN    D  I+  TT+IGM P V+ TP+   +L    +V D +Y P  T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228

Query: 489 LREAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIM 531
           L +A+E GA I +G++MF+ Q    +E +TG +P    + Q +M
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIDRMKQLVM 272

Bacillus weihenstephanensis (strain KBAB4) (taxid: 315730)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q730K1|AROE_BACC1 Shikimate dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=aroE PE=3 SV=1

 Score =  166 bits (421), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/284 (35%), Positives = 165/284 (58%), Gaps = 19/284 (6%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALS 433
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL         S
Sbjct: 114 S---SKPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATVHS 170

Query: 434 LA-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 490
           +A  LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L 
Sbjct: 171 VALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKILC 230

Query: 491 EAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 533
           EA+E GA I +G++MF+ Q    +E +TG  P  + + Q ++ K
Sbjct: 231 EAKEQGAMIQNGIDMFVYQGALAFEMWTGRTPNIERMKQLVIRK 274

Bacillus cereus (strain ATCC 10987) (taxid: 222523)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	534
224107417	538	dehydroquinate dehydratase/ shikimate de	0.966	0.959	0.820	0.0
359477446	522	PREDICTED: bifunctional 3-dehydroquinate	0.968	0.990	0.820	0.0
255551621	539	shikimate dehydrogenase, putative [Ricin	0.964	0.955	0.818	0.0
76782194	536	putative 3-dehydroquinate dehydratase/sh	0.988	0.985	0.787	0.0
58047529	508	3-dehydroquinate dehydratase/shikimate 5	0.947	0.996	0.825	0.0
356495945	527	PREDICTED: bifunctional 3-dehydroquinate	0.986	1.0	0.769	0.0
297736925	495	unnamed protein product [Vitis vinifera]	0.921	0.993	0.818	0.0
388521847	515	unknown [Medicago truncatula]	0.960	0.996	0.776	0.0
281193024	526	dehydroquinate dehydratase [Solanum tube	0.977	0.992	0.760	0.0
449503035	542	PREDICTED: bifunctional 3-dehydroquinate	0.953	0.939	0.769	0.0

>gi|224107417|ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus trichocarpa] gi|222863514|gb|EEF00645.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus trichocarpa]

 Score =  855 bits (2208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/519 (82%), Positives = 470/519 (90%), Gaps = 3/519 (0%)

Query: 16  SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
           SGG+R+NPTLIC PIM +SVDKM + M +A + GADLVEIRLD LK+FNP  +IKTLI  
Sbjct: 23  SGGVRRNPTLICTPIMADSVDKMAILMAEAKSVGADLVEIRLDSLKDFNPNSDIKTLILH 82

Query: 76  SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
           SP+PTLFTYRP+WEGGQY+GDE  R+D LRLAMELGADYIDVEL+VA EFN+ +RG KP 
Sbjct: 83  SPLPTLFTYRPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHEFNELLRGNKPG 142

Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVS 195
           KCK+IVSSHNY+ TPSVE+L NLVARIQA+GADIVK ATTALDI+DVAR+FQITVHSQV 
Sbjct: 143 KCKLIVSSHNYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQITVHSQV- 201

Query: 196 HVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 255
             PIIGLVMGERGLISRILCAKFGG+LTFGTLE+G+VSAPGQPTIKDLLDLYNFR +GPD
Sbjct: 202 --PIIGLVMGERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRLIGPD 259

Query: 256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 315
           TKVFGIIGKPVGHSKSP+L+NEAFKSVG NGV+VHLLVDDIA+F QTYSS DFAGFSCTI
Sbjct: 260 TKVFGIIGKPVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTDFAGFSCTI 319

Query: 316 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 375
           PHKE A KCCDEV  VAKSIGAVNCIIRRQ+DGKLFGYNTDYVGAISAIE+GLR   NVS
Sbjct: 320 PHKEDAAKCCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGLRASQNVS 379

Query: 376 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
             V S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY+RA+ LA+ +GG A++LA
Sbjct: 380 NTVGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVLADIIGGDAITLA 439

Query: 436 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 495
           DLENF+PEDGMILANTTSIGMQPKVDETP+ K+AL  Y+LVFDAVYTPKITRLLREAEES
Sbjct: 440 DLENFHPEDGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTPKITRLLREAEES 499

Query: 496 GATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
           GA IV+GLEMFIGQAYEQ+ERFT LPAPKELFQKIM+KY
Sbjct: 500 GAKIVTGLEMFIGQAYEQFERFTELPAPKELFQKIMSKY 538

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477446|ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Vitis vinifera]

 Score =  855 bits (2208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/517 (82%), Positives = 467/517 (90%)

Query: 16  SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
           SGGM KN TLICVPIMGE+++KMVVDM KA  SGADLVE+RLD LK FNPR++++ LI++
Sbjct: 3   SGGMSKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRK 62

Query: 76  SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
            P+PTLFTYRP WEGGQY+GDEN R D LRLAMELGADY+D+EL+VA EF +SI G+KPE
Sbjct: 63  CPLPTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPE 122

Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVS 195
           K KVIVSSHNYQ TPSVEDL NLV  IQA+GADIVK ATTAL+ITDVAR+FQITVHSQVS
Sbjct: 123 KFKVIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVS 182

Query: 196 HVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 255
            VP+IGLVMGERGLISRILC KF G+LTFG+LE GIVSAPGQPTIKDLL+LYNFRQ+GPD
Sbjct: 183 SVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPD 242

Query: 256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 315
           TKVFG+IGKPV HSKSP LYNEAFKSVGFNGV+VHLLVDDIAKFF TYS+ DFAGFSCTI
Sbjct: 243 TKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTI 302

Query: 316 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 375
           PHKEAA+KCCDEV  VAKSIGAVNCIIRR SDGKLFGYNTDYVGAISAIEDGLR    +S
Sbjct: 303 PHKEAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKIS 362

Query: 376 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
               S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY RARELA+ VGG ALSLA
Sbjct: 363 STSGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAVGGDALSLA 422

Query: 436 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 495
           DL NF+PE+GMILANTTSIGMQPKVDETPI KHAL +Y+LVFDA+YTPKITRLLREA+ES
Sbjct: 423 DLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQES 482

Query: 496 GATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMA 532
           GATIV+GLEMFIGQAYEQ+ERFTGLPAPKELF++ ++
Sbjct: 483 GATIVTGLEMFIGQAYEQFERFTGLPAPKELFKQFIS 519

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551621|ref|XP_002516856.1| shikimate dehydrogenase, putative [Ricinus communis] gi|223543944|gb|EEF45470.1| shikimate dehydrogenase, putative [Ricinus communis]

 Score =  854 bits (2206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/518 (81%), Positives = 468/518 (90%), Gaps = 3/518 (0%)

Query: 17  GGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES 76
           GG+RKNPTLIC PIM +SVDKM++++ KA  +GADLVEIRLD LK FN  ++IKTLI  S
Sbjct: 25  GGLRKNPTLICAPIMADSVDKMLINLVKAKENGADLVEIRLDSLKTFNASDDIKTLITRS 84

Query: 77  PVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK 136
           P+PTLFTYRP WEGG+YDGDENER+D LRLAMELGADYIDVEL+VA +FNDSIRG KP K
Sbjct: 85  PLPTLFTYRPKWEGGEYDGDENERLDALRLAMELGADYIDVELKVAHKFNDSIRGNKPAK 144

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSH 196
           CKVIVSSHNY  TPSVEDL NLVA IQA+GADIVK ATTALDITDVAR+FQITVHSQV  
Sbjct: 145 CKVIVSSHNYHNTPSVEDLGNLVADIQAAGADIVKIATTALDITDVARIFQITVHSQV-- 202

Query: 197 VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDT 256
            PIIG+VMGERGLISRILCAKFGG+LTFGTLE+GIVSAPGQP IKDLLDLYNFRQ+GPDT
Sbjct: 203 -PIIGIVMGERGLISRILCAKFGGYLTFGTLESGIVSAPGQPMIKDLLDLYNFRQIGPDT 261

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIP 316
           KV+GIIGKPVGHSKSP+LYNEAFKSVGFNGV+VHLLVDDIA F QT+SS DFAGFSCTIP
Sbjct: 262 KVYGIIGKPVGHSKSPVLYNEAFKSVGFNGVYVHLLVDDIASFLQTFSSTDFAGFSCTIP 321

Query: 317 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 376
           HKEAAV CCD +D+VA+SIGAVNCIIRRQ DGKLFGYNTDY GAI+AIE+GLR   N+SG
Sbjct: 322 HKEAAVDCCDGIDSVARSIGAVNCIIRRQRDGKLFGYNTDYDGAITAIEEGLRVSQNISG 381

Query: 377 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 436
              S LAGKLFVVIGAGGAGKALAYGAK KGA+VVIANRTY+RA+ LA+ VGG A++LAD
Sbjct: 382 AADSPLAGKLFVVIGAGGAGKALAYGAKQKGAKVVIANRTYERAKGLADAVGGVAIALAD 441

Query: 437 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESG 496
           L NF PE GM+LANTTSIGMQPKV+ETPIPKHAL +Y+LVFDAVYTPKITRLLREAEESG
Sbjct: 442 LGNFRPESGMVLANTTSIGMQPKVEETPIPKHALRNYSLVFDAVYTPKITRLLREAEESG 501

Query: 497 ATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
           A  VSGLEMFIGQAYEQ+E FTGLPAPKELF+KIM+K+
Sbjct: 502 AATVSGLEMFIGQAYEQFENFTGLPAPKELFRKIMSKH 539

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76782194|gb|ABA54867.1| putative 3-dehydroquinate dehydratase/shikimate dehydrogenase [Fagus sylvatica]

 Score =  839 bits (2168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/542 (78%), Positives = 475/542 (87%), Gaps = 14/542 (2%)

Query: 1   MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
           M+S N+L+AS S   ++  G +RKNPTL+C PIM ESVDKMV++M KA   GADLVEIRL
Sbjct: 1   MDSTNVLLASSSASLQIGGGEIRKNPTLVCAPIMAESVDKMVINMDKAKQGGADLVEIRL 60

Query: 58  DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
           D LK+FNP  ++KTLIKE P+PTLFTYRP WEGGQYDGDE +R+D LRLAME GADYIDV
Sbjct: 61  DSLKSFNPNGDLKTLIKECPLPTLFTYRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDV 120

Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
           ELQVA+EFN+SI GKKPE  KVIVSSHNYQ TPSVEDL NLVARIQA+GADIVKFATTAL
Sbjct: 121 ELQVAQEFNESIYGKKPEMFKVIVSSHNYQNTPSVEDLGNLVARIQATGADIVKFATTAL 180

Query: 178 DITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQ 237
           +ITDVAR+FQI VHSQVS VPII +VMGERG ISRILC KFGGFL+FGT+E+GIVSAPGQ
Sbjct: 181 EITDVARIFQIIVHSQVSSVPIIAIVMGERGFISRILCPKFGGFLSFGTIESGIVSAPGQ 240

Query: 238 PTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA 297
           P +KDLL LYNFRQ+GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGV+V      ++
Sbjct: 241 PIMKDLLHLYNFRQIGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVYV------LS 294

Query: 298 KFFQTYSSND-----FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFG 352
            +     S D     FAGFS TIPHKEAA+KCCDEVD VAKSIGAVNCI+RR +DGK+FG
Sbjct: 295 WWMTCKISPDLLILRFAGFSITIPHKEAALKCCDEVDPVAKSIGAVNCIVRRSTDGKIFG 354

Query: 353 YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVI 412
           YNTDYVGAISAIEDGLRG  N+S    S LAGKLFVVIGAGGAGKALAYGAK KGARVVI
Sbjct: 355 YNTDYVGAISAIEDGLRGSKNISYAADSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVI 414

Query: 413 ANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGH 472
           ANRTY+RA+E+A+TVGG ALSLADLENF+PEDGMILANTTSIGMQPKVDETPIPKHAL  
Sbjct: 415 ANRTYERAKEIADTVGGQALSLADLENFHPEDGMILANTTSIGMQPKVDETPIPKHALRS 474

Query: 473 YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMA 532
           Y++VFDAVYTPKITRLLRE+EESGA IV+G+EMFIGQA+EQ+ERFTGLPAPKELF+KIMA
Sbjct: 475 YSVVFDAVYTPKITRLLRESEESGAIIVTGVEMFIGQAFEQFERFTGLPAPKELFKKIMA 534

Query: 533 KY 534
           KY
Sbjct: 535 KY 536

Source: Fagus sylvatica

Species: Fagus sylvatica

Genus: Fagus

Family: Fagaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|58047529|gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans regia]

 Score =  836 bits (2160), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/509 (82%), Positives = 456/509 (89%), Gaps = 3/509 (0%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
           TL+C PIM ESVDKMV++M KA    ADLVEIRLD LK+FNP  ++KT+IK SP+PTLFT
Sbjct: 1   TLVCAPIMAESVDKMVINMNKAKQGDADLVEIRLDSLKSFNPSNDLKTIIKASPLPTLFT 60

Query: 84  YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
           YRP WEGGQYDGDE +R+D LRLAME GADYIDVELQVA EFNDSI G+KPE  KVIVSS
Sbjct: 61  YRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVACEFNDSIYGRKPENSKVIVSS 120

Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLV 203
           HNYQ TPS EDL NLVARIQA+GADIVK ATTAL+I DVAR+FQITVHSQV   PIIG+V
Sbjct: 121 HNYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQV---PIIGIV 177

Query: 204 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 263
           MGERG +SRILC KFGGFLTFGT+E+GIVSAPGQPT+KDLL LYN R++GPDTKVFGIIG
Sbjct: 178 MGERGFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFGIIG 237

Query: 264 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 323
           KPV HSKSPILYNEAFKSV FNGV++ LLVDDIA F QTYSS DFAGFSCTIPHKEAA+K
Sbjct: 238 KPVHHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTYSSTDFAGFSCTIPHKEAALK 297

Query: 324 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALA 383
           CCDEVD VAKSIGAVNCIIRR +DGKL GYNTDYVGAISAIEDGLRG  N S    S LA
Sbjct: 298 CCDEVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGLRGSHNSSNTADSPLA 357

Query: 384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPE 443
           GKLFVVIGAGGAGKALAYGAK KGARVVIANRTYDRARELA+T+GG ALSLADL+NF+PE
Sbjct: 358 GKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYDRARELADTIGGDALSLADLDNFHPE 417

Query: 444 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL 503
           DGMILAN+TSIGMQPKVDETPIPKHAL  Y+LVFDAVYTPK+TRLLREAEESGA IV+GL
Sbjct: 418 DGMILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTPKMTRLLREAEESGAKIVTGL 477

Query: 504 EMFIGQAYEQYERFTGLPAPKELFQKIMA 532
           EMFIGQAYEQ+ERFTGLPAPKELF+K+MA
Sbjct: 478 EMFIGQAYEQFERFTGLPAPKELFRKVMA 506

Source: Juglans regia

Species: Juglans regia

Genus: Juglans

Family: Juglandaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356495945|ref|XP_003516831.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Glycine max]

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/534 (76%), Positives = 458/534 (85%), Gaps = 7/534 (1%)

Query: 1   MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGL 60
           M+SPN L    S   + G RKN TLICVPIMGESV+KM +D+ KA A GADLVEIRLD L
Sbjct: 1   MDSPNAL----STAPAAGSRKNATLICVPIMGESVEKMEIDVDKAKAGGADLVEIRLDSL 56

Query: 61  KNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQ 120
           K F+P  ++   I+   +P LFTYRP WEGG YDGDEN+R+D LRLAMELGADYID+ELQ
Sbjct: 57  KTFDPYRDLNAFIQHRSLPLLFTYRPKWEGGMYDGDENKRLDALRLAMELGADYIDIELQ 116

Query: 121 VAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDIT 180
           VA EF DSIRGK   K KVIVSSHNYQ TPS+EDL NLVARIQA+GADIVK ATTALDIT
Sbjct: 117 VAHEFYDSIRGKTFNKTKVIVSSHNYQLTPSIEDLGNLVARIQATGADIVKIATTALDIT 176

Query: 181 DVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTI 240
           DVAR+FQI VHSQV   P IGLVMG+RGLISRIL AKFGG+LTFGTLE+G+VSAPGQPT+
Sbjct: 177 DVARMFQIMVHSQV---PFIGLVMGDRGLISRILSAKFGGYLTFGTLESGVVSAPGQPTL 233

Query: 241 KDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFF 300
           KDLL LYN RQ+ PDTKVFGIIGKPVGHSKSPIL+NE FKS+G NGV++ LLVDD+A F 
Sbjct: 234 KDLLYLYNLRQLAPDTKVFGIIGKPVGHSKSPILFNEVFKSIGLNGVYLFLLVDDLANFL 293

Query: 301 QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGA 360
           +TYSS DF GFS TIPHKE A+KCCDEVD VAKSIGAVNCI+RR +DGKL GYNTDYVGA
Sbjct: 294 RTYSSTDFVGFSVTIPHKETALKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGA 353

Query: 361 ISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRA 420
           I+AIE+GLRG+ N S    S LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD A
Sbjct: 354 ITAIENGLRGKHNGSSTTISPLAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDHA 413

Query: 421 RELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 480
           R+LA  +GG AL+LADL+N++PEDGMILANTTSIGMQPKVDETP+ KHAL +Y+LVFDAV
Sbjct: 414 RKLAYAIGGDALALADLDNYHPEDGMILANTTSIGMQPKVDETPVSKHALKYYSLVFDAV 473

Query: 481 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
           YTPKITRLL+EAEESGATIV+GLEMF+GQAY QYE FTGLPAPKELF+KIM  Y
Sbjct: 474 YTPKITRLLKEAEESGATIVTGLEMFMGQAYGQYENFTGLPAPKELFRKIMENY 527

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736925|emb|CBI26126.3| unnamed protein product [Vitis vinifera]

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/495 (81%), Positives = 445/495 (89%), Gaps = 3/495 (0%)

Query: 38  MVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDE 97
           MVVDM KA  SGADLVE+RLD LK FNPR++++ LI++ P+PTLFTYRP WEGGQY+GDE
Sbjct: 1   MVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTLFTYRPKWEGGQYEGDE 60

Query: 98  NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
           N R D LRLAMELGADY+D+EL+VA EF +SI G+KPEK KVIVSSHNYQ TPSVEDL N
Sbjct: 61  NSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGN 120

Query: 158 LVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAK 217
           LV  IQA+GADIVK ATTAL+ITDVAR+FQITVHSQV   P+IGLVMGERGLISRILC K
Sbjct: 121 LVVSIQATGADIVKIATTALEITDVARIFQITVHSQV---PVIGLVMGERGLISRILCPK 177

Query: 218 FGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNE 277
           F G+LTFG+LE GIVSAPGQPTIKDLL+LYNFRQ+GPDTKVFG+IGKPV HSKSP LYNE
Sbjct: 178 FSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNE 237

Query: 278 AFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGA 337
           AFKSVGFNGV+VHLLVDDIAKFF TYS+ DFAGFSCTIPHKEAA+KCCDEV  VAKSIGA
Sbjct: 238 AFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHKEAALKCCDEVSPVAKSIGA 297

Query: 338 VNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGK 397
           VNCIIRR SDGKLFGYNTDYVGAISAIEDGLR    +S    S LAGKLFVVIGAGGAGK
Sbjct: 298 VNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTSGSPLAGKLFVVIGAGGAGK 357

Query: 398 ALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQ 457
           ALAYGAK KGARVVIANRTY RARELA+ VGG ALSLADL NF+PE+GMILANTTSIGMQ
Sbjct: 358 ALAYGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNFHPENGMILANTTSIGMQ 417

Query: 458 PKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERF 517
           PKVDETPI KHAL +Y+LVFDA+YTPKITRLLREA+ESGATIV+GLEMFIGQAYEQ+ERF
Sbjct: 418 PKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIVTGLEMFIGQAYEQFERF 477

Query: 518 TGLPAPKELFQKIMA 532
           TGLPAPKELF++ ++
Sbjct: 478 TGLPAPKELFKQFIS 492

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521847|gb|AFK48985.1| unknown [Medicago truncatula]

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/514 (77%), Positives = 454/514 (88%), Gaps = 1/514 (0%)

Query: 22  NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPT 80
           N TLICVPIMGE++ KM+ D+ KA  +GADLVEIRLD LK FNP +++ T +++   +P 
Sbjct: 2   NATLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61

Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           LFTYRP WEGG Y+GDEN+R+D LRLAMEL ADYID+EL+VA +F DSIRGK   K KVI
Sbjct: 62  LFTYRPKWEGGMYEGDENQRLDALRLAMELEADYIDIELKVAHQFYDSIRGKTYNKTKVI 121

Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPII 200
           VSSHNYQ TPSVEDL NLVARIQA+GADIVK ATTA++ITDVAR+F+I VHSQV HVP I
Sbjct: 122 VSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFEIMVHSQVRHVPFI 181

Query: 201 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 260
           GLVMG+RGLISRILCAKFGG+LTFGTLE+G+VSAPGQPT+KDLL LYNFRQ+GPDTKV+G
Sbjct: 182 GLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPDTKVYG 241

Query: 261 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 320
           I+GKPV HSKSPIL+NEAFK++GF+GVFV LLVDD+A F +TYSS DF GFS TIPHKEA
Sbjct: 242 IVGKPVSHSKSPILFNEAFKTIGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKEA 301

Query: 321 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 380
           A+KCCDEVD VAKSIGAVNC++RR +DGKL GYNTDYVGAISAIEDGLRG+   SG   S
Sbjct: 302 ALKCCDEVDPVAKSIGAVNCVVRRPTDGKLIGYNTDYVGAISAIEDGLRGKHIDSGTAVS 361

Query: 381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 440
            LAGKLFVVIGAGGAGKALAYGAK KGAR+VIANRTYDRARELA+ +GG AL+L DL+N+
Sbjct: 362 PLAGKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTLNDLDNY 421

Query: 441 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 500
           +PEDGMILANTTSIGMQPKVDETPI KHAL  Y+LVFDAVYTPK+TRLL+EAEESGATIV
Sbjct: 422 HPEDGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEESGATIV 481

Query: 501 SGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
           +GLEMFIGQAY QYE +TGLPAPKELF+KIM  Y
Sbjct: 482 TGLEMFIGQAYRQYEHYTGLPAPKELFRKIMENY 515

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|281193024|gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/531 (76%), Positives = 457/531 (86%), Gaps = 9/531 (1%)

Query: 6   LLVASGSKLVSG-GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFN 64
           L+V SG K + G  MRKN TLIC PIM +SVD+M++ M KA  SGADLV +R+D LK+FN
Sbjct: 3   LVVDSGVKKMEGEAMRKNQTLICAPIMADSVDQMLILMQKAKTSGADLVGVRVDSLKSFN 62

Query: 65  PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVARE 124
           PR +I  LIK+ P+PTLFTYRP WEGGQY GDE  R+D LRLAMELGADYIDVEL+   E
Sbjct: 63  PRPDIDALIKQCPLPTLFTYRPTWEGGQYAGDEMSRLDALRLAMELGADYIDVELKAIDE 122

Query: 125 FNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVAR 184
           FN+++ G K  KCK+IVSSHNY+ TPS EDL NLVARIQASGADIVKFATTA DITDVAR
Sbjct: 123 FNNALHGNKSAKCKLIVSSHNYESTPSAEDLGNLVARIQASGADIVKFATTAQDITDVAR 182

Query: 185 VFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLL 244
           VFQITVHSQ   VPII +VMGE+GL+SRILC KFGG+LTFGTLE G VSAPGQPT++DLL
Sbjct: 183 VFQITVHSQ---VPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEMGKVSAPGQPTVEDLL 239

Query: 245 DLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYS 304
           +LYNFRQ+GPDTK+FGIIGKPV HSK P+LYNE+F+SVGFNGVF+HLLVDDIA FF+TYS
Sbjct: 240 NLYNFRQLGPDTKIFGIIGKPVSHSKPPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYS 299

Query: 305 SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI 364
           S DFAGFSCTIPHKEAA+ CC E+D  AK+IGAVNCIIRR  DGKLFG NTDY+GAISAI
Sbjct: 300 SLDFAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRR-PDGKLFGCNTDYIGAISAI 358

Query: 365 EDGLRG-RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 423
           E+GL+G + ++SG   S LAGKLFVVIGAGGAGKA+AYGAK KGARVVIANRTY+RAREL
Sbjct: 359 EEGLQGSQPSISG---SPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVIANRTYERAREL 415

Query: 424 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 483
           A  VG  ALSL +L NF+PE+ MILANTTSIGMQPKVD+TPI K AL HY LVFDAVYTP
Sbjct: 416 AIVVGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHYPLVFDAVYTP 475

Query: 484 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
           KITRLLREA+ESGA IV+G+EMFIGQAYEQYERFTGLPAPKELF+ IM+ Y
Sbjct: 476 KITRLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKNIMSTY 526

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449503035|ref|XP_004161812.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Cucumis sativus]

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/513 (76%), Positives = 447/513 (87%), Gaps = 4/513 (0%)

Query: 19  MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPV 78
           +++N +L+CVPIM +S D M+ D  KA  SGADLVEIRLD LK FN + ++ TL+KE P+
Sbjct: 28  IKRNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPL 87

Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCK 138
           PTLFTYRP WEGGQYDGDENER++VLRL MELGADY+DVELQVAREF DSIRGKKPEKCK
Sbjct: 88  PTLFTYRPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCK 147

Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVP 198
           VIVSSHNY+ TPS++DL  LVARIQ SGADIVK ATTA DITDV+R+F I VHSQV   P
Sbjct: 148 VIVSSHNYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQV---P 204

Query: 199 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 258
           +IGLVMGERGLISRILCAKFGG+LTF TLE GIVSAPGQPTI+DLL LYNFRQ+GPDTKV
Sbjct: 205 LIGLVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKV 264

Query: 259 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 318
           +GIIGKPVGHSKSP+L+NEAFKS+ FNGV+VH LVDDI  F QTYSS DFAGFSCTIPHK
Sbjct: 265 YGIIGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHK 324

Query: 319 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 378
           EAA K CDEVD VAKSIGAVNCI+RR  DGK  GYNTDYVGAISAIE+ L+G    S   
Sbjct: 325 EAAAKFCDEVDPVAKSIGAVNCIVRRH-DGKFCGYNTDYVGAISAIEEKLQGDYTGSPLS 383

Query: 379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 438
            S L G+LFVVIGAGGAGKALAYGAK KGA+V+IANRTY+RA+ELA+T+GG A++LADL 
Sbjct: 384 GSPLFGRLFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLN 443

Query: 439 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 498
           NF+PED MILANTTSIGMQPKV+ETPI K AL +Y+LVFDAVYTP +TRLL++AE SGA 
Sbjct: 444 NFHPEDNMILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAK 503

Query: 499 IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 531
           IV+GLEMF+GQAYEQYERFTG+PAPKELF+KIM
Sbjct: 504 IVTGLEMFVGQAYEQYERFTGMPAPKELFRKIM 536

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	534
TAIR|locus:2081036	603	MEE32 "MATERNAL EFFECT EMBRYO	0.994	0.880	0.708	2.6e-198
TIGR_CMR|BA_4561	308	BA_4561 "shikimate 5-dehydroge	0.490	0.850	0.332	7.2e-36
TIGR_CMR|SPO_3891	277	SPO_3891 "shikimate 5-dehydrog	0.464	0.895	0.369	2.9e-31
SGD|S000002534	1588	ARO1 "Pentafunctional arom pro	0.863	0.290	0.255	1.9e-30
POMBASE|SPAC1834.02	1573	aro1 "pentafunctional aromatic	0.876	0.297	0.270	2e-29
TIGR_CMR|CHY_0623	280	CHY_0623 "shikimate 5-dehydrog	0.488	0.932	0.300	2.7e-29
TIGR_CMR|CBU_2075	233	CBU_2075 "3-dehydroquinate deh	0.406	0.931	0.318	4.9e-28
CGD|CAL0004346	1551	ARO1 [Candida albicans (taxid:	0.932	0.321	0.240	6.2e-27
TIGR_CMR|DET_0465	286	DET_0465 "shikimate 5-dehydrog	0.488	0.912	0.297	1.1e-26
TIGR_CMR|GSU_1490	286	GSU_1490 "shikimate 5-dehydrog	0.496	0.926	0.312	1.8e-26

TAIR|locus:2081036 MEE32 "MATERNAL EFFECT EMBRYO ARREST 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 1920 (680.9 bits), Expect = 2.6e-198, P = 2.6e-198
 Identities = 382/539 (70%), Positives = 442/539 (82%)

Query:     1 MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
             ME  N+ VAS S   ++ S  + KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRL
Sbjct:    68 MEPSNVYVASNSTEMEIGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRL 127

Query:    58 DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
             D LK+FNP E++KT+IK+SP+PTLFTYRP WEGGQY+GDENER DVLRLAMELGADYIDV
Sbjct:   128 DWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDV 187

Query:   118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
             ELQVA EF  SI GKKP K KVIVSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+
Sbjct:   188 ELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAV 247

Query:   178 DITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQ 237
             DI DVAR+F IT  +QV   P IGLVMGERGL+SRILC+KFGG+LTFGTL++  VSAPGQ
Sbjct:   248 DIADVARMFHITSKAQV---PTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQ 304

Query:   238 PTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA 297
             PTIKDLLDLYNFR++GPDTKV+GIIGKPV HSKSPI++N+AFKSV FNGV+VHLLVD++ 
Sbjct:   305 PTIKDLLDLYNFRRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLV 364

Query:   298 KFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDY 357
              F Q YSS+DFAGFSCTIPHKEAA++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD 
Sbjct:   365 SFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDC 424

Query:   358 VGAISAIEDGLRGRLNVSG--GVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANR 415
             +G+ISAIEDGLR   + S     SS LA K  VVI                  +VVIANR
Sbjct:   425 IGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANR 484

Query:   416 TYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL 475
             TY+RA ELAE +GG ALSL DL+N++PEDGM+LANTTS+GMQP V+ETPI K AL HYAL
Sbjct:   485 TYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYAL 544

Query:   476 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
             VFDAVYTP+ITRLLREAEESGA  VSG EMF+ QAYEQ+E FTGLPAPKEL+ +IM+KY
Sbjct:   545 VFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIMSKY 603

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA;IDA

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA;IDA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP;NAS

GO:0050661 "NADP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0019632 "shikimate metabolic process" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

TIGR_CMR|BA_4561 BA_4561 "shikimate 5-dehydrogenase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 94/283 (33%), Positives = 160/283 (56%)

Query:   257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
             +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct:     3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query:   315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
              PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct:    63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query:   375 SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVV-IANRTYDRAREL--AETVGGHA 431
             S   S  L  K  +++                  + + +ANRT D+A+EL  A T   H+
Sbjct:   114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query:   432 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 489
             ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct:   171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query:   490 REAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIM 531
              EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++
Sbjct:   230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVI 272

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

TIGR_CMR|SPO_3891 SPO_3891 "shikimate 5-dehydrogenase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 345 (126.5 bits), Expect = 2.9e-31, P = 2.9e-31
 Identities = 98/265 (36%), Positives = 135/265 (50%)

Query:   260 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPH 317
             G+IG P+ HSKSP L+    K+ G NG ++ + V   D+A+  +T     F G + TIPH
Sbjct:    10 GVIGHPISHSKSPRLHGHWLKTYGINGHYIPMDVAPQDLAQVVRTLPKAGFVGVNITIPH 69

Query:   318 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG- 376
             KEA +   D++   A  IGAVN +I R+ DG++   NTD  G +  +  G  G    SG 
Sbjct:    70 KEAVMSVADQITDRATLIGAVNTLIFRE-DGRILADNTDGYGFMENLRAGAPGWDPKSGP 128

Query:   377 GVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALSLAD 436
              V     G    VI                   V++ NRT  RA +L +  G   +++AD
Sbjct:   129 AVVFGAGGAARAVISALAEAGVP---------EVIVTNRTRVRADKLKDDFG-QRVTVAD 178

Query:   437 -LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 494
              ++  N  ED  ++ NTTS+GM  K  E  +P   L   A+V D VY P  TRLL EAEE
Sbjct:   179 WVQAGNVIEDARLVVNTTSLGMIGK-PELRVPLDGLRADAVVTDLVYAPLKTRLLAEAEE 237

Query:   495 SGATIVSGLEMFIGQAYEQYERFTG 519
              G T V GL M + QA   +ER+ G
Sbjct:   238 MGCTTVDGLGMLLHQAVPGFERWFG 262

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

SGD|S000002534 ARO1 "Pentafunctional arom protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 363 (132.8 bits), Expect = 1.9e-30, P = 1.9e-30
 Identities = 130/508 (25%), Positives = 237/508 (46%)

Query:    49 GADLVEIRLDGLKNFNP---RENIKTLIKESP-VPTLFTYRPIWEGGQYDGDENERV-DV 103
             G + VE+R+D L N++     + +  L K +  +P +FT R + +GG +  +E + + ++
Sbjct:  1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158

Query:   104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS--NLVAR 161
               +A++ G +++D+EL +  +    +  K+    K+I S H++Q   S +D    N   +
Sbjct:  1159 YDIALKNGVEFLDLELTLPTDIQYEVINKRGNT-KIIGSHHDFQGLYSWDDAEWENRFNQ 1217

Query:   162 IQASGADIVKFATTALDITDVARVFQITVHSQVSHV--PIIGLVMGERGLISRILCAKFG 219
                   D+VKF  TA++  D  R+     H + +H   P+I + M  +G ISR+L     
Sbjct:  1218 ALTLDVDVVKFVGTAVNFEDNLRL----EHFRDTHKNKPLIAVNMTSKGSISRVLNNVLT 1273

Query:   220 GFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAF 279
               +T   L N   +APGQ T+  +  +Y     G + K   ++GKP+GHS+SPIL+N  +
Sbjct:  1274 P-VTSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGY 1329

Query:   280 KSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGA 337
             + +G    F     +   + K      + +F G + TIP K   ++  DE+   AK IGA
Sbjct:  1330 EILGLPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGA 1389

Query:   338 VNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXX 397
             VN +I    + K  G NTD++G  +A+         ++ GV   +     +VI       
Sbjct:  1390 VNTVIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSR 1439

Query:   398 XXXXXXXXXX-XRVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANT 451
                         ++ I NRT  + + L E++          S   +E      G+ ++  
Sbjct:  1440 AALYALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAVSCV 1499

Query:   452 TSIGMQPKVDE--TPIPKHAL--GHYALV---FDAVYTPKITRLLREAEESGAT-IVSGL 503
              +   +P  DE  + + +  +   H A V    +A Y P +T ++  +++     +V G 
Sbjct:  1500 PAD--KPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGS 1557

Query:   504 EMFIGQAYEQYERFTGLPAP-KELFQKI 530
             +M + Q   Q+E++TG   P K +F  +
Sbjct:  1558 QMLVHQGVAQFEKWTGFKGPFKAIFDAV 1585

GO:0003866 "3-phosphoshikimate 1-carboxyvinyltransferase activity" evidence=IEA;IDA

GO:0004765 "shikimate kinase activity" evidence=IEA;IDA

GO:0003856 "3-dehydroquinate synthase activity" evidence=IEA;IDA

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA;IDA

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016765 "transferase activity, transferring alkyl or aryl (other than methyl) groups" evidence=IEA

GO:0009423 "chorismate biosynthetic process" evidence=IEA;TAS

POMBASE|SPAC1834.02 aro1 "pentafunctional aromatic polypeptide Aro1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 355 (130.0 bits), Expect = 2.0e-29, P = 2.0e-29
 Identities = 138/511 (27%), Positives = 236/511 (46%)

Query:    49 GADLVEIRLDGLKNFNPRENIKTL--IKE--------SPVPTLFTYRPIWEGGQYDGDEN 98
             G D +E+R+D LK+      I +L  + E        + +P +FT R I +GG +  D+ 
Sbjct:  1077 GCDAIEVRVDYLKDPKSSNGISSLDFVAEQISLLRCSTTLPIIFTIRTISQGGLFPNDKE 1136

Query:    99 ERVDVLRL-AMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
             E    L L AM  G D++DVEL  + E  + +   K    K+I+S H+   T S      
Sbjct:  1137 EEAKELMLSAMRYGCDFVDVELGWSSETINILYQHKGYT-KLIMSWHDLSGTWSWARPHE 1195

Query:   158 LVARIQ--ASGADIVKFATTALDITDVARV--FQITVHSQVSHVPIIGLVMGERGLISRI 213
              + +++  +S AD++K    A ++ D   +  F+  + + +  +P+I   MG  G +SRI
Sbjct:  1196 WMQKVELASSYADVIKLVGMANNLNDNLELEEFRTRITNSMD-IPLILFNMGRFGQLSRI 1254

Query:   214 LCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDL-YNFRQMGPDTKVFGIIGKPVGHSKSP 272
             L  KF   +T   L +   +APGQ T+K L +      ++ P+ K F + GKP+ HS+SP
Sbjct:  1255 L-NKFMTPVTHPLLPSK--AAPGQLTVKQLNEARVLIGEILPE-KFF-LFGKPIKHSRSP 1309

Query:   273 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 332
             IL++ A++ +G    +     D + +  +  +  DF G + TIP+K + +K  DE+   A
Sbjct:  1310 ILHSTAYELLGLPHTYEAFETDTVDEVQKVLNLPDFGGANVTIPYKLSVMKFMDELSDEA 1369

Query:   333 KSIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVI 390
             +  GAVN II  +   KL   G NTD+ G      + L G   VS   ++ L     V+ 
Sbjct:  1370 RFFGAVNTIIPIRIGDKLVLRGDNTDWRGIYDTFANALDG---VSLRDTNGL-----VIG 1421

Query:   391 XXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILA 449
                               R+ + NRT   +  + +     + + + D +N   E+   + 
Sbjct:  1422 AGGTSRAAIYSLHRLGVSRIYLLNRTLANSYRVQDVFPPDYNIHIIDSDNIPSEELSSVT 1481

Query:   450 NTTSIGMQPKVDETP-----IPKHALGHYA---LVFDAVYTPKITRLLREAEESGATIVS 501
              +  +   P   E P     + K  L + A   +  D  Y P  T L+  A +      +
Sbjct:  1482 LSAVVSTIPADIELPEKVASVIKALLANKADGGVFLDMAYKPLHTPLMAVASDLEWKCCN 1541

Query:   502 GLEMFIGQAYEQYERFTGLPAPKE-LFQKIM 531
             GLE  + Q    +  +TG+ AP + ++QK++
Sbjct:  1542 GLEALVRQGLASFHLWTGMTAPFDAVYQKVI 1572

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA

GO:0003856 "3-dehydroquinate synthase activity" evidence=IEA

GO:0003866 "3-phosphoshikimate 1-carboxyvinyltransferase activity" evidence=IEA

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA

GO:0004765 "shikimate kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA

GO:0009423 "chorismate biosynthetic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

TIGR_CMR|CHY_0623 CHY_0623 "shikimate 5-dehydrogenase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 328 (120.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 85/283 (30%), Positives = 147/283 (51%)

Query:   255 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 312
             +TK+ GIIG P+ H+ SP ++NEAFK++  N +++ L V  + + +      + +F G +
Sbjct:     6 ETKLTGIIGYPLKHTLSPQMHNEAFKALNLNFLYLPLEVAEESLPQAIYGLKAFNFRGIN 65

Query:   313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 372
              TIP+KE      DEV T AK+IGAVN I+  +  G+L GYNTD  G + ++++      
Sbjct:    66 VTIPYKEKVFPFLDEVATEAKTIGAVNTIVHDR--GRLIGYNTDAPGFLLSLKEN----- 118

Query:   373 NVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGG--- 429
             +V       + GK  +++                   ++IANRT D+A+ELA+   G   
Sbjct:   119 DVE------VTGKKVLLLGAGGAARAVAYALLTAGAELIIANRTIDKAKELAKDFQGVGK 172

Query:   430 --HALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKIT 486
                 L L D +  +     +  NT  +GM P  ++ P +    +    + +D +Y P  T
Sbjct:   173 ISEILELGD-KPISLAPYHMAVNTLPLGMHPYENQMPAVDFTGVTSDFVAYDLIYNPAET 231

Query:   487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 529
             + L+ ++E GA  ++GL M + Q    +E++TG+  P ++ +K
Sbjct:   232 KFLKASKEKGARTINGLSMLLWQGVLAFEKWTGVSPPVKVMKK 274

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

TIGR_CMR|CBU_2075 CBU_2075 "3-dehydroquinate dehydratase, type I" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 317 (116.6 bits), Expect = 4.9e-28, P = 4.9e-28
 Identities = 72/226 (31%), Positives = 130/226 (57%)

Query:    22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTL 81
             N   ICV ++G+++++ +  + +A  +  D VE+R+D L+  NP   ++ +   +    +
Sbjct:     3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTHKKAI 60

Query:    82 FTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIV 141
                R   +GG++ G    + ++L+   +LG DY+D++L VA +   SI  KK    K+I+
Sbjct:    61 LCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI--SIHEKK---AKIII 115

Query:   142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIG 201
             S HN+ +TP + +L+ L+  ++    D+ KFAT +    DV  +F++ ++ + +   I+ 
Sbjct:   116 SYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKKNNENMIV- 174

Query:   202 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 247
             L MGE+G I R+L    GG+LTF ++ NG +SAPGQ   K + D Y
Sbjct:   175 LGMGEQGKIIRLLSPLLGGYLTFSSI-NGAISAPGQIDFKTMQDFY 219

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=ISS

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=ISS

CGD|CAL0004346 ARO1 [Candida albicans (taxid:5476)]

 Score = 334 (122.6 bits), Expect = 6.2e-27, P = 6.2e-27
 Identities = 131/545 (24%), Positives = 240/545 (44%)

Query:    13 KLVSGGMRKNPTL---ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR--- 66
             KL++G  R    +     V +    ++++V D+ ++   GAD VE+R+D  K+ +     
Sbjct:  1029 KLITGAERPVVPVGRSAAVVLTSPDLNEVVRDL-ESITIGADAVELRVDLFKDTSAEFVA 1087

Query:    67 ENIKTLIKESPVPTLFTYRPIWEGGQYDGDEN--ERVDVLRLAMELGADYIDVELQVARE 124
               I  + K + +P ++T R + +GG++  DEN  E   +L L + LG  Y+D++L    E
Sbjct:  1088 AQIAVIRKHADLPIIYTVRTMSQGGKFP-DENVDELKSLLLLGIRLGVAYVDLQLTAPNE 1146

Query:   125 FNDSIRGKKPEKCKVIVSSH--NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDV 182
               + I  KK    +VI +    N +   +  +  N   +  +  ADIV+    A  I D 
Sbjct:  1147 LIEEISSKKGFT-RVIGTYQDINGELKWNNVEWKNKYNQGVSMNADIVRLVGKANSIQDN 1205

Query:   183 ARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQ-PTIK 241
               +      + +   P+I   +G +G +S++L     G  TF  + + ++    +  TI 
Sbjct:  1206 LDLENFKKQNTLK--PLIAFNLGSQGKLSQVL----NG--TFTPISHKLLPNDEEFLTIG 1257

Query:   242 DLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQ 301
             +L   Y F   G   K F +IG P+ HS+SP L+N  +K++     F      D+   + 
Sbjct:  1258 ELNQTY-FDIGGFTAKKFWVIGSPIEHSRSPNLHNAGYKALNLPYQFGRFEATDVDVVYD 1316

Query:   302 TYSSN-DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGA 360
                +  DF G + T+P K   +K   ++   A++IGAVN +I    +G  FG NTD+VG 
Sbjct:  1317 NLINKPDFGGLAITMPLKLDIMKFATKLSDAAETIGAVNTLI--PIEGGYFGDNTDWVGI 1374

Query:   361 ISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRA 420
              ++          +  GV    +    VV                   ++ + NRT  + 
Sbjct:  1375 SNSF---------IRAGVPPKSSSNGLVVGAGGTSRAAIYALHQMGCAKIYLVNRTAAKL 1425

Query:   421 RELAETVG-GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPK----------HA 469
              EL ++    + L + + E    +   +    + I     +D   + K           +
Sbjct:  1426 EELVKSFPKDYNLEIVETEQQADKASKVSLAVSCIPADKPLDGEVLKKIERILSNGSEQS 1485

Query:   470 LGHYALVFDAVYTPKITRLLREAEESGA-TIVSGLEMFIGQAYEQYERFTGLPAPKELFQ 528
              G    + +A Y P++T +++ AEE     ++ G+EM + Q   Q++  TG  AP E+  
Sbjct:  1486 AGFKPTLLEASYKPRVTPIMKLAEEQYKWKVIPGVEMLVNQGDRQFKLHTGFTAPYEIIH 1545

Query:   529 KIMAK 533
             + + +
Sbjct:  1546 RAVVE 1550

GO:0005829 "cytosol" evidence=IEA

GO:0003866 "3-phosphoshikimate 1-carboxyvinyltransferase activity" evidence=IEA

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA

GO:0004765 "shikimate kinase activity" evidence=IEA

GO:0003856 "3-dehydroquinate synthase activity" evidence=IEA

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA

TIGR_CMR|DET_0465 DET_0465 "shikimate 5-dehydrogenase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 305 (112.4 bits), Expect = 1.1e-26, P = 1.1e-26
 Identities = 85/286 (29%), Positives = 137/286 (47%)

Query:   254 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGF 311
             PD  +FG+IG PV HS SP + N AFK    + +++ +    +++     +    +  G 
Sbjct:     5 PDA-LFGLIGFPVSHSVSPAMQNAAFKHCKLDYLYLTIAAKPEELQNVIASMGPLNIRGL 63

Query:   312 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 371
             + TIPHK   +K  D +D  A+ IGAVN I+    +G+L GYNTD+ G +  +E     R
Sbjct:    64 NVTIPHKIEVIKYIDSLDPAAEKIGAVNTIVNE--NGRLKGYNTDFGGFVRLLE---HNR 118

Query:   372 LNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETV---- 427
             +        A A + F ++                   + +  R  ++A++LA  +    
Sbjct:   119 I--------APAKQRFTLLGAGGSAHAIALAVCNLGGHLTVLARQEEKAKDLAGKMCLRL 170

Query:   428 GGHALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 483
              G    L +L + N E+ +    ++ N T +GM     ++ +P   L     V DA+Y P
Sbjct:   171 SGKTQGL-ELNDTNLEEALADTDVIVNCTPVGMGNLAGQSLVPPRLLRPDLTVIDAIYNP 229

Query:   484 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 529
               TRLL +AE+ GA I++GLEM + Q    +E +T   AP  L  K
Sbjct:   230 CKTRLLEDAEKRGARIINGLEMLVWQGAMSFEIWTNQKAPFRLMMK 275

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

TIGR_CMR|GSU_1490 GSU_1490 "shikimate 5-dehydrogenase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 303 (111.7 bits), Expect = 1.8e-26, P = 1.8e-26
 Identities = 90/288 (31%), Positives = 137/288 (47%)

Query:   256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 313
             T+V GIIG+PV HS SP++ N A +++G +  +V   V++  +A   +  ++    GF+ 
Sbjct:     7 TRVLGIIGQPVSHSLSPLMQNAALQAMGLDYAYVPFAVEEDCLADAVRGLAALGVVGFNV 66

Query:   314 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 373
             TIPHK A +   D +   A+ IGA N + R  SD  L GYNTD  G I ++ + L     
Sbjct:    67 TIPHKSAILPLLDRLSPEAELIGAANVVKREGSD--LVGYNTDGTGFIQSLSEDL----- 119

Query:   374 VSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALS 433
                G + A   ++ V+                    VVIANR+  R  EL+     H + 
Sbjct:   120 ---GFTPA-GCRILVMGAGGAARAAVASLAGAGAASVVIANRSIARGEELSAAFRRHFIG 175

Query:   434 LA------DLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 485
                     D EN N   ++  +L NT+S+GM        +    +G +  V+D VY P +
Sbjct:   176 TQFAAIPLDPENLNRCVQNFDLLVNTSSVGMGGTAFPG-MDLSRMGPHGAVYDMVYVPAV 234

Query:   486 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK-IMA 532
             T LL EAE  G    +G+ M   Q     E +TG+  P+ L +  +MA
Sbjct:   235 TPLLAEAERCGIRYANGIGMLAAQGECALELWTGVRPPEGLMKACLMA 282

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SQT8	DHQSD_ARATH	1, ., 1, ., 1, ., 2, 5	0.7402	0.9943	0.8805	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.2.1.70	LOW CONFIDENCE prediction!
4th Layer	4.2.1.10	0.991
4th Layer	1.1.1.25	0.991
3rd Layer	4.2.1	0.976
3rd Layer	1.2.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	534
PLN02520	529	PLN02520, PLN02520, bifunctional 3-dehydroquinate	0.0
COG0169	283	COG0169, AroE, Shikimate 5-dehydrogenase [Amino ac	1e-85
pfam01487	222	pfam01487, DHquinase_I, Type I 3-dehydroquinase	4e-84
PRK00258	278	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewe	2e-82
TIGR01093	228	TIGR01093, aroD, 3-dehydroquinate dehydratase, typ	2e-72
cd00502	225	cd00502, DHQase_I, Type I 3-dehydroquinase, (3-deh	4e-65
TIGR00507	270	TIGR00507, aroE, shikimate 5-dehydrogenase	8e-59
COG0710	231	COG0710, AroD, 3-dehydroquinate dehydratase [Amino	1e-52
PRK09310	477	PRK09310, aroDE, bifunctional 3-dehydroquinate deh	8e-51
PRK12548	289	PRK12548, PRK12548, shikimate 5-dehydrogenase; Pro	7e-46
cd01065	155	cd01065, NAD_bind_Shikimate_DH, NAD(P) binding dom	3e-43
PRK02412	253	PRK02412, aroD, 3-dehydroquinate dehydratase; Prov	8e-41
TIGR01809	282	TIGR01809, Shik-DH-AROM, shikimate-5-dehydrogenase	4e-33
PRK12749	288	PRK12749, PRK12749, quinate/shikimate dehydrogenas	2e-30
PRK12549	284	PRK12549, PRK12549, shikimate 5-dehydrogenase; Rev	3e-30
pfam08501	83	pfam08501, Shikimate_dh_N, Shikimate dehydrogenase	4e-28
PRK12550	272	PRK12550, PRK12550, shikimate 5-dehydrogenase; Rev	5e-27
PRK13575	238	PRK13575, PRK13575, 3-dehydroquinate dehydratase;	7e-26
PRK14027	283	PRK14027, PRK14027, quinate/shikimate dehydrogenas	1e-18
pfam01488	133	pfam01488, Shikimate_DH, Shikimate / quinate 5-deh	5e-15
PRK00045	423	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	8e-11
cd05213	311	cd05213, NAD_bind_Glutamyl_tRNA_reduct, NADP-bindi	1e-09
COG0373	414	COG0373, HemA, Glutamyl-tRNA reductase [Coenzyme m	8e-09
TIGR01035	417	TIGR01035, hemA, glutamyl-tRNA reductase	3e-07
PRK13576	216	PRK13576, PRK13576, 3-dehydroquinate dehydratase;	2e-06
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-05
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-04
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-04
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-04
pfam03435	380	pfam03435, Saccharop_dh, Saccharopine dehydrogenas	3e-04
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-04
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	4e-04
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	6e-04
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	6e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	9e-04
pfam03807	93	pfam03807, F420_oxidored, NADP oxidoreductase coen	0.001
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	0.001
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
smart01002	149	smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT	0.002
cd05305	359	cd05305, L-AlaDH, Alanine dehydrogenase NAD-bindin	0.003
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	0.003

>gnl|CDD|178135 PLN02520, PLN02520, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

 Score = 1022 bits (2645), Expect = 0.0
 Identities = 431/532 (81%), Positives = 473/532 (88%), Gaps = 4/532 (0%)

Query: 3   SPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKN 62
                +AS     SGG+R+NPTLICVPIM +SVDKM+++M KA   GADLVEIRLD LKN
Sbjct: 2   VSTASLASDDLQGSGGVRRNPTLICVPIMADSVDKMLIEMAKAKELGADLVEIRLDFLKN 61

Query: 63  FNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVA 122
           FNPRE++KTLIK+SP+PTL TYRP WEGGQY+GDEN+R D LRLAMELGADY+DVEL+VA
Sbjct: 62  FNPREDLKTLIKQSPLPTLVTYRPKWEGGQYEGDENKRQDALRLAMELGADYVDVELKVA 121

Query: 123 REFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDV 182
            EF +SI GKKPEKCKVIVSSHNY+ TPSVE+L NLVARIQA+GADIVK ATTALDITDV
Sbjct: 122 HEFINSISGKKPEKCKVIVSSHNYENTPSVEELGNLVARIQATGADIVKIATTALDITDV 181

Query: 183 ARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD 242
           AR+FQITVHSQV   P IGLVMGERGLISRILC KFGG+LTFGTLE G VSAPGQPTIKD
Sbjct: 182 ARMFQITVHSQV---PTIGLVMGERGLISRILCPKFGGYLTFGTLEAGKVSAPGQPTIKD 238

Query: 243 LLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQT 302
           LLDLYNFRQ+GPDTKV+GIIGKPVGHSKSPIL+NEAFKSVGFNGV+VHLLVDD+AKF QT
Sbjct: 239 LLDLYNFRQIGPDTKVYGIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLVDDLAKFLQT 298

Query: 303 YSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAIS 362
           YSS DFAGFSCTIPHKE A+KCCDEVD +AKSIGA+N IIRR SDGKL GYNTDY+GAIS
Sbjct: 299 YSSPDFAGFSCTIPHKEDALKCCDEVDPIAKSIGAINTIIRRPSDGKLVGYNTDYIGAIS 358

Query: 363 AIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE 422
           AIEDGLR     S    S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY+RA+E
Sbjct: 359 AIEDGLRA-SGSSPASGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKE 417

Query: 423 LAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT 482
           LA+ VGG AL+LADLENF+PE+GMILANTTS+GMQP VDETPI KHAL HY+LVFDAVYT
Sbjct: 418 LADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYT 477

Query: 483 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
           PKITRLLREAEESGA IVSG EMFI QAYEQ+ERFTGLPAPKELF++IM+KY
Sbjct: 478 PKITRLLREAEESGAIIVSGTEMFIRQAYEQFERFTGLPAPKELFREIMSKY 529

Length = 529

>gnl|CDD|223247 COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

 Score =  265 bits (680), Expect = 1e-85
 Identities = 109/290 (37%), Positives = 167/290 (57%), Gaps = 20/290 (6%)

Query: 252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 309
           M   TK+FG+IG P+ HS SP ++N AF+++G + V++   V  +D+ +      +  F 
Sbjct: 2   MNGKTKLFGVIGNPISHSLSPRMHNAAFRALGLDYVYLAFEVPPEDLPEAVSGIRALGFR 61

Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 369
           G + TIP KEAA+   DE+   A+ IGAVN ++R   DGKL GYNTD +G + A+++   
Sbjct: 62  GLNVTIPFKEAALPLLDELSPRARLIGAVNTLVRE-DDGKLRGYNTDGIGFLRALKEF-- 118

Query: 370 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVG 428
                  G+   + GK  +++GAGGA +A+A+  A+A   R+ + NRT +RA ELA+  G
Sbjct: 119 -------GLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171

Query: 429 -----GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 483
                  A +LADLE     D  +L N T +GM     ++P+P   L   A+V+D VY P
Sbjct: 172 ELGAAVEAAALADLEGLEEAD--LLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNP 229

Query: 484 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK 533
             T LLREA   GA  + GL M + QA E +E +TG+  P ++ ++ + +
Sbjct: 230 LETPLLREARAQGAKTIDGLGMLVHQAAEAFELWTGVEPPVDVMKEALIE 279

Length = 283

>gnl|CDD|216526 pfam01487, DHquinase_I, Type I 3-dehydroquinase

 Score =  259 bits (665), Expect = 4e-84
 Identities = 87/225 (38%), Positives = 135/225 (60%), Gaps = 6/225 (2%)

Query: 27  CVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFT 83
           CVP+ G S+++ + ++ +    GAD VE+RLD L++ +     E +  L +++ +P +FT
Sbjct: 1   CVPVTGPSLEEALAELEEL-EEGADAVELRLDLLEDVDAEDVSEQLSALREKTGLPIIFT 59

Query: 84  YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
            R   EGG++DG E E +++L+ A+ LG DYID+EL  A +   ++   K    K+I+S 
Sbjct: 60  VRTKSEGGRFDGSEEEYLELLKEALRLGPDYIDIELSSAPDELLAVIIAKKGGTKIILSY 119

Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLV 203
           H+++ TPS EDL +L   +Q  GADIVK A  A  I DV R+ + T  ++    P+I + 
Sbjct: 120 HDFEGTPSWEDLLSLYEEMQKLGADIVKIAVMANSIEDVLRLLRFTSEAKELDKPLIAIS 179

Query: 204 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 248
           MGE G ISRIL   FG  LT+ +L     SAPGQ T+++L +   
Sbjct: 180 MGELGRISRILGPVFGSVLTYASLGK--ASAPGQITLEELREALE 222

Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase.) catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate giving dehydroshikimate. Dehydroquinase functions in the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Type II 3-dehydroquinase catalyzes the trans-dehydration of 3-dehydroshikimate see pfam01220. Length = 222

>gnl|CDD|234703 PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed

 Score =  257 bits (659), Expect = 2e-82
 Identities = 96/274 (35%), Positives = 148/274 (54%), Gaps = 16/274 (5%)

Query: 256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 313
           T+++ +IG P+ HSKSP+++N AFK +G +GV++ +LV  +D+    + + +    G + 
Sbjct: 5   TRLYAVIGNPIAHSKSPLIHNAAFKQLGLDGVYLAILVPPEDLEDAVKGFFALGGRGANV 64

Query: 314 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 373
           T+P KEAA    DE+   A+ IGAVN ++    DG+L G NTD +G + A+E+ L     
Sbjct: 65  TVPFKEAAFALADELSERARLIGAVNTLVLE--DGRLIGDNTDGIGFVRALEERL----- 117

Query: 374 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 432
                   L GK  +++GAGGA +A+         A + I NRT +RA ELA+  G    
Sbjct: 118 -----GVDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK 172

Query: 433 SLADLENFNPEDGM-ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 491
           +  DLE         ++ N TS GM  ++   P+P   L    +V+D +Y P  T  L  
Sbjct: 173 AELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAW 232

Query: 492 AEESGATIVSGLEMFIGQAYEQYERFTGLPAPKE 525
           A+  GA  + GL M + QA E +E +TG+  P E
Sbjct: 233 AKAQGARTIDGLGMLVHQAAEAFELWTGVRPPVE 266

Length = 278

>gnl|CDD|233268 TIGR01093, aroD, 3-dehydroquinate dehydratase, type I

 Score =  229 bits (587), Expect = 2e-72
 Identities = 84/231 (36%), Positives = 129/231 (55%), Gaps = 11/231 (4%)

Query: 25  LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPVP 79
            I VP+    +++ +    K    GAD+VE+R+D LK+ +   ++  LI++        P
Sbjct: 1   KIFVPLTAPDLEEALATAEKIC-KGADIVELRVDLLKDPSSNNDVDALIEQLSQLRPDKP 59

Query: 80  TLFTYRPIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREF-NDSIRGKKPEKC 137
            +FT R I EGG++ G+E E ++ L R A   G D++D+EL +  +   + I   K    
Sbjct: 60  LIFTIRTISEGGKFPGNEEEYLEELKRAADSPGPDFVDIELFLPDDAVKELINIAKKGGT 119

Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSH- 196
           K+I+S H++Q TPS E++   + +  + GADIVK A  A    DV  + +IT        
Sbjct: 120 KIIMSYHDFQKTPSWEEIVERLEKALSYGADIVKIAVMANSKEDVLTLLEITNKVDEHAD 179

Query: 197 VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 247
           VP+I + MG+RG ISR+L A FG  LTFG+L     SAPGQ ++ DL +L 
Sbjct: 180 VPLITMSMGDRGKISRVLGAVFGSVLTFGSLGK--ASAPGQISVDDLRELL 228

This model detects 3-dehydroquinate dehydratase, type I, either as a monofunctional protein or as a domain of a larger, multifunctional protein. It is often found fused to shikimate 5-dehydrogenase (EC 1.1.1.25), and sometimes additional domains. Type II 3-dehydroquinate dehydratase, designated AroQ, is described by the model TIGR01088 [Amino acid biosynthesis, Aromatic amino acid family]. Length = 228

>gnl|CDD|188633 cd00502, DHQase_I, Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase)

 Score =  211 bits (538), Expect = 4e-65
 Identities = 81/231 (35%), Positives = 128/231 (55%), Gaps = 12/231 (5%)

Query: 25  LICVPIMGESVDKMVVDMGKA--NASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVP 79
            ICVP+ G     ++ +         GAD VE+R+D L++ +     E +  L + +P+P
Sbjct: 1   KICVPLTG---PDLLEEALSLLELLLGADAVELRVDLLEDPSIDDVAEQLSLLRELTPLP 57

Query: 80  TLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKV 139
            +FT R   EGG ++G E E +++L  A++LG DY+D+EL  A    + I  +K    K+
Sbjct: 58  IIFTVRTKSEGGNFEGSEEEYLELLEEALKLGPDYVDIELDSAL-LEELINSRKKGNTKI 116

Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH-SQVSHVP 198
           I S H++  TPS E+L + + ++ A GADIVK A  A  I D  R+ + T     +  +P
Sbjct: 117 IGSYHDFSGTPSDEELVSRLEKMAALGADIVKIAVMANSIEDNLRLLKFTRQVKNLYDIP 176

Query: 199 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 249
           +I + MGE G +SRIL   FG  LT+ +L     SAPGQ ++++L    + 
Sbjct: 177 LIAINMGELGKLSRILSPVFGSPLTYASLPE--PSAPGQLSVEELKQALSL 225

Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase). Catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate to produce dehydroshikimate. Dehydroquinase is the third enzyme in the shikimate pathway, which is involved in the biosynthesis of aromatic amino acids. Type I DHQase exists as a homodimer. Type II 3-dehydroquinase also catalyzes the same overall reaction, but is unrelated in terms of sequence and structure, and utilizes a completely different reaction mechanism. Length = 225

>gnl|CDD|161904 TIGR00507, aroE, shikimate 5-dehydrogenase

 Score =  195 bits (498), Expect = 8e-59
 Identities = 102/283 (36%), Positives = 145/283 (51%), Gaps = 22/283 (7%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 314
           K++G+IG P+ HSKSP+++N  FK +G  G ++  LV  DD+      + +  F G + T
Sbjct: 1   KLYGVIGNPIAHSKSPLIHNAFFKQLGLEGPYIAFLVPPDDLEDALSGFFALGFKGANVT 60

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
            P KE A +  DE+D  AK  GAVN ++    DGKL GYNTD +G +S +E  +  R N 
Sbjct: 61  SPFKERAFQFLDEIDGRAKLAGAVNTLVLE--DGKLVGYNTDGIGLVSDLEQLIPLRPN- 117

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE----TVGGH 430
                     +  ++IGAGGA KA+A         V+IANRT  +A ELAE         
Sbjct: 118 ----------QNVLIIGAGGAAKAVALELLKADCNVIIANRTVSKAEELAERFQRYGEIQ 167

Query: 431 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 490
           A S+ +L         ++ N TS GM   +DE P+P   L    LV+D VY P  T  L 
Sbjct: 168 AFSMDELP---LHRVDLIINATSAGMSGNIDEPPVPAEYLKEGKLVYDLVYNPLETPFLA 224

Query: 491 EAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK 533
           EA+  G   + GL M + QA   +E +TG+    E   + +  
Sbjct: 225 EAKSLGTKTIDGLGMLVYQAALSFELWTGVEPDIEKMFEQLIS 267

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain [Amino acid biosynthesis, Aromatic amino acid family]. Length = 270

>gnl|CDD|223782 COG0710, AroD, 3-dehydroquinate dehydratase [Amino acid transport and metabolism]

 Score =  178 bits (453), Expect = 1e-52
 Identities = 75/223 (33%), Positives = 126/223 (56%), Gaps = 6/223 (2%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKN-FNPRENIKTLIKESPV-PTL 81
             I VP++G  + ++     K+    AD+VE+R+D L++     E  K L ++ P  P +
Sbjct: 2   PKIIVPVVGLDIAELKEQAEKSKELDADIVELRVDLLESNVEVLEVAKALREKDPDKPLI 61

Query: 82  FTYRPIWEGGQYDGDENERVDVLR-LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           FT+R + EGG++ G E E +++L+ LA   G DYID+EL    +    I  K  +K  VI
Sbjct: 62  FTFRTVKEGGEFPGSEEEYIELLKKLAELNGPDYIDIELSSPEDDVKEII-KFAKKHGVI 120

Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPII 200
           VS H+++ TP +E++   + ++++ GADIVK A       DV  + + T   + +  P+I
Sbjct: 121 VSYHDFEKTPPLEEIIERLDKMESLGADIVKIAVMPQSKEDVLDLLEATREFKEAEKPVI 180

Query: 201 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 243
            + MG+ G ISR+    FG  +T+ +L+    SAPGQ ++ +L
Sbjct: 181 TISMGKTGKISRVAGPVFGSPITYASLDK--PSAPGQISVDEL 221

Length = 231

>gnl|CDD|137204 PRK09310, aroDE, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

 Score =  180 bits (459), Expect = 8e-51
 Identities = 142/482 (29%), Positives = 218/482 (45%), Gaps = 51/482 (10%)

Query: 51  DLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110
           D +E+R+D L + +  E +K LI+ +P+P L T++      Q    +     +  LA +L
Sbjct: 26  DCIELRVDLLLSLSDLE-LKKLIELAPIPIL-TWKKHESCSQAAWIDK----MQSLA-KL 78

Query: 111 GADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIV 170
             +Y+D++    +E    IR   P K K+I+S H    T   ED+  L   + AS AD  
Sbjct: 79  NPNYLDIDKDFPKEALIRIRKLHP-KIKIILSYH----TSEHEDIIQLYNEMLASAADYY 133

Query: 171 KFATTALDITDVARVFQITVH-SQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLEN 229
           K A ++   TD+  +        + + V    L MG  G  SRIL         +     
Sbjct: 134 KIAVSSSSSTDLLNIIHQKRSLPENTTV----LCMGGMGRPSRILSPLLQNAFNYAAGIG 189

Query: 230 GIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV 289
               APGQ +++ LL  YN+  +   + ++G+IG PV  S S + +N  F  +  N  ++
Sbjct: 190 APPVAPGQLSLEHLL-FYNYANLSAQSPIYGLIGDPVDRSISHLSHNPLFSQLSLNCPYI 248

Query: 290 HLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSD 347
            L +   ++ KFF T     F G S T+P K A +   D++D   K  G+ N ++ R   
Sbjct: 249 KLPLTPQELPKFFSTIRDLPFLGLSVTMPLKTAVLDFLDKLDPSVKLCGSCNTLVFRN-- 306

Query: 348 GKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG 407
           GK+ GYNTD  G  S ++     + N+       L  +   ++GAGGA KA+A      G
Sbjct: 307 GKIEGYNTDGEGLFSLLK-----QKNIP------LNNQHVAIVGAGGAAKAIATTLARAG 355

Query: 408 ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPK 467
           A ++I NRT   A  LA    G A  L  L   +  D +I        + P V    IPK
Sbjct: 356 AELLIFNRTKAHAEALASRCQGKAFPLESLPELHRIDIIINC------LPPSVT---IPK 406

Query: 468 HALGHYA-LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKEL 526
                +   V D    PK +   + A   G++I+ G EMF  QA  Q+     L  P  L
Sbjct: 407 ----AFPPCVVDINTLPKHSPYTQYARSQGSSIIYGYEMFAEQALLQFR----LWFPTLL 458

Query: 527 FQ 528
           F+
Sbjct: 459 FK 460

Length = 477

>gnl|CDD|183585 PRK12548, PRK12548, shikimate 5-dehydrogenase; Provisional

 Score =  162 bits (411), Expect = 7e-46
 Identities = 99/294 (33%), Positives = 143/294 (48%), Gaps = 29/294 (9%)

Query: 256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 313
           T + G+IG PVGHS SP +YN +F+  G +  ++   + VD +    +   + +  G + 
Sbjct: 9   TGLLGLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFDIPVDKVPDAIKAIKTFNMRGANV 68

Query: 314 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 373
           T+P K  A K  DE+   A+ IGAVN I+    DGKL G+ TD +G +  + +       
Sbjct: 69  TMPCKSEAAKYMDELSPAARIIGAVNTIV--NDDGKLTGHITDGLGFVRNLREH------ 120

Query: 374 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRT---YDRARELAETVGG 429
              GV   + GK   VIGAGGA  A+       GA+ + I N     Y+RA + AE +  
Sbjct: 121 ---GVD--VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ 175

Query: 430 -------HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 479
                  +   L D E    E     IL N T +GM+P   ET I   ++    LV  D 
Sbjct: 176 EVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADT 235

Query: 480 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK 533
           VY PK T+LL +AE +G   V GL M + Q  E Y+ +TG   P E  +++   
Sbjct: 236 VYNPKKTKLLEDAEAAGCKTVGGLGMLLWQGAEAYKLYTGKDMPVEEVKELYFS 289

Length = 289

>gnl|CDD|133443 cd01065, NAD_bind_Shikimate_DH, NAD(P) binding domain of Shikimate dehydrogenase

 Score =  150 bits (381), Expect = 3e-43
 Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 16/168 (9%)

Query: 355 TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIA 413
           TD +G + A+E+               L GK  +++GAGGA +A+AY     GA ++VI 
Sbjct: 1   TDGLGFVRALEEAGIE-----------LKGKKVLILGAGGAARAVAYALAELGAAKIVIV 49

Query: 414 NRTYDRARELAETVG--GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG 471
           NRT ++A+ LAE  G  G A++  DLE     +  ++ NTT +GM+P  DE P+P   L 
Sbjct: 50  NRTLEKAKALAERFGELGIAIAYLDLEEL-LAEADLIINTTPVGMKP-GDELPLPPSLLK 107

Query: 472 HYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 519
              +V+D VY P  T LL+EA   GA  + GLEM + QA E +E +TG
Sbjct: 108 PGGVVYDVVYNPLETPLLKEARALGAKTIDGLEMLVYQAAEAFELWTG 155

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DHs, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 155

>gnl|CDD|235036 PRK02412, aroD, 3-dehydroquinate dehydratase; Provisional

 Score =  147 bits (373), Expect = 8e-41
 Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 11/229 (4%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPV 78
             I VPIMG+++++++ +    +   AD++E R D L+  +  E++           +  
Sbjct: 16  PKIIVPIMGKTLEEVLAEALAISKYDADIIEWRADFLEKISDVESVLAAAPAIREKFAGK 75

Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELGA-DYIDVELQVARE-FNDSIRGKKPEK 136
           P LFT+R   EGG+    + E + +++  ++ G  DYIDVEL   ++   + +       
Sbjct: 76  PLLFTFRTAKEGGEIALSDEEYLALIKAVIKSGLPDYIDVELFSGKDVVKEMVAFAHEHG 135

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH--SQV 194
            KV++S H+++ TP  E++   + ++++ GADIVK A       DV  +   T       
Sbjct: 136 VKVVLSYHDFEKTPPKEEIVERLRKMESLGADIVKIAVMPQSEQDVLTLLNATREMKELY 195

Query: 195 SHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 243
           +  P+I + MG+ G ISR+    FG   TF +L+    SAPGQ +++DL
Sbjct: 196 ADQPLITMSMGKLGRISRLAGEVFGSSWTFASLDK--ASAPGQISVEDL 242

Length = 253

>gnl|CDD|233580 TIGR01809, Shik-DH-AROM, shikimate-5-dehydrogenase, fungal AROM-type

 Score =  127 bits (320), Expect = 4e-33
 Identities = 80/282 (28%), Positives = 124/282 (43%), Gaps = 24/282 (8%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN--DFAGFSCT 314
           K   IIGKP+ HS+SP L+N  ++ +G              +  +  S     F G S T
Sbjct: 6   KKAFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFETCSAEELKEVLSGFGPQFGGASVT 65

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
           IP K A ++  DE    A  IG+VN ++R Q +G   G NTD+ G   A+          
Sbjct: 66  IPLKFAILRFADEHTDRASLIGSVNTLLRTQ-NGIWKGDNTDWDGIAGAL---------A 115

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAET-VGGHAL 432
           + G    LAG   +VIGAGG  +A  Y   + G   + + NR  D+   L +  V    +
Sbjct: 116 NIGKFEPLAGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVI 175

Query: 433 ----SLADLENFNPEDGMILANT--TSIGMQPKVDETPIPKHALGHYALV---FDAVYTP 483
                 +       +   +L +T    +          +P   L   +      DA Y P
Sbjct: 176 TRLEGDSGGLAIE-KAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDP 234

Query: 484 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKE 525
             T L+     +G  ++SGL+M + Q + Q+E++TG+PAP+E
Sbjct: 235 WPTPLVAIVSAAGWRVISGLQMLLHQGFAQFEQWTGMPAPRE 276

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway [Amino acid biosynthesis, Aromatic amino acid family]. Length = 282

>gnl|CDD|183721 PRK12749, PRK12749, quinate/shikimate dehydrogenase; Reviewed

 Score =  120 bits (301), Expect = 2e-30
 Identities = 87/290 (30%), Positives = 145/290 (50%), Gaps = 28/290 (9%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           ++ G++  P+ HS SP + N+A +  G    ++   VD+       +   +    G   +
Sbjct: 8   ELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVS 67

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
           +P+K+ A +  DE+   AK +GA+N I+    DG L GYNTD  G I AI++        
Sbjct: 68  MPNKQLACEYVDELTPAAKLVGAINTIV--NDDGYLRGYNTDGTGHIRAIKE-------- 117

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT---YDRARELAETVGGH 430
           SG     + GK  V++GAGGA  A+      +G + + + NR    +D+A   A+ V  +
Sbjct: 118 SG---FDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN 174

Query: 431 A------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVY 481
                    LAD + F        IL N T +GM+P  +E+ +   +L H  L V + VY
Sbjct: 175 TDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY 234

Query: 482 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 531
            P +T+LL++A+++G   + G  M + Q  EQ+  +TG   P E  +++M
Sbjct: 235 NPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM 284

Length = 288

>gnl|CDD|183586 PRK12549, PRK12549, shikimate 5-dehydrogenase; Reviewed

 Score =  119 bits (300), Expect = 3e-30
 Identities = 83/283 (29%), Positives = 124/283 (43%), Gaps = 42/283 (14%)

Query: 260 GIIGKPVGHSKSPILYNEAFKSVGFNGVF-------VHLLVDDIAKFFQTYSSNDFAGFS 312
           G+IG  +  S SP ++     + G   V+       + L  D + +         FAG +
Sbjct: 9   GLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAERMGFAGLN 68

Query: 313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL---- 368
            T P K+A +   DE+   A+++GAVN ++ R  DG+  G+NTD+ G   +   GL    
Sbjct: 69  ITHPCKQAVIPHLDELSDDARALGAVNTVVFR--DGRRIGHNTDWSGFAESFRRGLPDAS 126

Query: 369 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 427
             R+               V +GAGGAG A+A+     G  R+ I +    RA  LA+ +
Sbjct: 127 LERV---------------VQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADEL 171

Query: 428 GGH-----ALSLADLENFNPE-DGMILANTTSIGMQPKVDETPIPKHAL--GHYALVFDA 479
                   A + +DL       DG++  + T  GM  K    P+P   L  G +  V D 
Sbjct: 172 NARFPAARATAGSDLAAALAAADGLV--HATPTGM-AKHPGLPLPAELLRPGLW--VADI 226

Query: 480 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPA 522
           VY P  T LLR A   G   + G  M + QA + +E FTG   
Sbjct: 227 VYFPLETELLRAARALGCRTLDGGGMAVFQAVDAFELFTGREP 269

Length = 284

>gnl|CDD|149523 pfam08501, Shikimate_dh_N, Shikimate dehydrogenase substrate binding domain

 Score =  106 bits (268), Expect = 4e-28
 Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 2/83 (2%)

Query: 261 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 318
           +IG P+ HS SP+++N AFK++G NGV+V   V  D++ +F +   +  F G + TIPHK
Sbjct: 1   LIGNPISHSLSPLIHNAAFKALGLNGVYVAFEVPPDNLPEFVEGLRALGFRGLNVTIPHK 60

Query: 319 EAAVKCCDEVDTVAKSIGAVNCI 341
           EAA+   DE+   AK IGAVN I
Sbjct: 61  EAAIPLLDELSPEAKRIGAVNTI 83

This domain is the substrate binding domain of shikimate dehydrogenase. Length = 83

>gnl|CDD|183587 PRK12550, PRK12550, shikimate 5-dehydrogenase; Reviewed

 Score =  110 bits (276), Expect = 5e-27
 Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 22/223 (9%)

Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 369
           G + ++P KEA +   DE+D  A++I +VN I+   +DG L  YNTDY+    AI   L 
Sbjct: 62  GCAVSMPFKEAVIPLVDELDPSAQAIESVNTIV--NTDGHLKAYNTDYI----AIAKLLA 115

Query: 370 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG 428
                S  V   L      + G+GG  KA+A   +  G     I  R     + LAE  G
Sbjct: 116 -----SYQVPPDLV---VALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG 167

Query: 429 GHALSLADLENFNPEDGMILANTTSIGMQ--PKVDETPIPKHALGHYALVFDAVYTPKIT 486
                  DL     +   IL N T IGM   P+ D+   P+  +   ++VFD V  P  T
Sbjct: 168 YEWR--PDLGGIEAD---ILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAET 222

Query: 487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQK 529
            L+R A   G T+++G E+   QA EQ+  +TG+    EL  +
Sbjct: 223 PLIRYARARGKTVITGAEVIALQAVEQFVLYTGVRPSDELIAE 265

Length = 272

>gnl|CDD|184156 PRK13575, PRK13575, 3-dehydroquinate dehydratase; Provisional

 Score =  105 bits (264), Expect = 7e-26
 Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 11/226 (4%)

Query: 33  ESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTL-IKESPVPTLFTYRPIW 88
            S+++ ++          D++E+R+D  +N       E I  L + +     L TYR   
Sbjct: 14  LSIEETLIQKINHRIDAIDIIELRIDQWENVTVDQLAEMITKLKVLQDSFKLLVTYRTKL 73

Query: 89  EGGQYDGDENERVDVLR-LAMELGADYIDVELQVAREFN---DSIRGKKPEKCKVIVSSH 144
           +GG      +  +++L  LA   G D ID+E Q   +       I   +    +V++S H
Sbjct: 74  QGGYGQFTNDLYLNLLSDLANINGIDMIDIEWQADIDIEKHQRLITHLQQYNKEVVISHH 133

Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQ-ITVHSQVSHVPIIGLV 203
           N++ TP +++L  +  ++Q    + VK A    +  DV  + Q ++  S      ++G+ 
Sbjct: 134 NFESTPPLDELKFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGIS 193

Query: 204 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 249
           M + GLISR     FGG L++G +  G   APGQ  + DL      
Sbjct: 194 MSKLGLISRTAQGVFGGALSYGCI--GEPQAPGQIHVTDLKAQVTL 237

Length = 238

>gnl|CDD|172521 PRK14027, PRK14027, quinate/shikimate dehydrogenase; Provisional

 Score = 86.2 bits (213), Expect = 1e-18
 Identities = 81/282 (28%), Positives = 122/282 (43%), Gaps = 31/282 (10%)

Query: 255 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVD-----DIAKFFQTYSSND 307
           D+ + G+IG+ +  S++P ++     + G   V+  +  L       D+           
Sbjct: 3   DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLG 62

Query: 308 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 367
           F G + T P+K+A +   DEV   A  +GAVN ++   + G   G+NTD  G    +E+G
Sbjct: 63  FNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVI-DATGHTTGHNTDVSGFGRGMEEG 121

Query: 368 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAET 426
           L      S            V +GAGG G A+AY     G  ++ +A+    RA+ LA+ 
Sbjct: 122 LPNAKLDS-----------VVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADV 170

Query: 427 ----VGGHALSLADL----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 478
               VG  A+   D     +     DG++  N T +GM P    T      L     V D
Sbjct: 171 INNAVGREAVVGVDARGIEDVIAAADGVV--NATPMGM-PAHPGTAFDVSCLTKDHWVGD 227

Query: 479 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 520
            VY P  T LL+ A   G   + G  M I QA + +  FTGL
Sbjct: 228 VVYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGL 269

Length = 283

>gnl|CDD|216527 pfam01488, Shikimate_DH, Shikimate / quinate 5-dehydrogenase

 Score = 71.6 bits (176), Expect = 5e-15
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 382 LAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG--HALSLADLE 438
           L GK  ++IGAG   +  A    +KGA+ + IANRT ++A+ELAE       AL L +LE
Sbjct: 10  LKGKKVLLIGAGEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFPVGGEALPLDELE 69

Query: 439 NFNPE-DGMILANTTSIGMQP 458
               E D  I+ + TS     
Sbjct: 70  ELLAEAD--IVISATSAPTPI 88

This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyzes the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyzes the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate. Length = 133

>gnl|CDD|234592 PRK00045, hemA, glutamyl-tRNA reductase; Reviewed

 Score = 63.7 bits (156), Expect = 8e-11
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 14/78 (17%)

Query: 375 SGGVSSA-----LAGKLF--------VVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRA 420
           +G VS A     LA ++F        +VIGAG  G+ +A     KG R + +ANRT +RA
Sbjct: 160 AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERA 219

Query: 421 RELAETVGGHALSLADLE 438
            ELAE  GG A+ L +L 
Sbjct: 220 EELAEEFGGEAIPLDELP 237

Length = 423

>gnl|CDD|133452 cd05213, NAD_bind_Glutamyl_tRNA_reduct, NADP-binding domain of glutamyl-tRNA reductase

 Score = 59.2 bits (144), Expect = 1e-09
 Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 382 LAGKLFVVIGAGGAG-KALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 438
           L GK  +VIGAG  G  A  + A    A + IANRTY+RA ELA+ +GG+A+ L +L 
Sbjct: 176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELL 233

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 311

>gnl|CDD|223450 COG0373, HemA, Glutamyl-tRNA reductase [Coenzyme metabolism]

 Score = 57.3 bits (139), Expect = 8e-09
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 382 LAGKLFVVIGAGGAG-KALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 440
           L  K  +VIGAG  G     + A+    ++ IANRT +RA ELA+ +G  A++L +L   
Sbjct: 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEA 235

Query: 441 -NPEDGMILA 449
               D +I +
Sbjct: 236 LAEADVVISS 245

Length = 414

>gnl|CDD|233242 TIGR01035, hemA, glutamyl-tRNA reductase

 Score = 52.4 bits (126), Expect = 3e-07
 Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 1/73 (1%)

Query: 382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENF 440
           L GK  ++IGAG  G+ +A     KG  +++IANRTY+RA +LA+ +GG A+   DLE +
Sbjct: 178 LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEY 237

Query: 441 NPEDGMILANTTS 453
             E  +++++T +
Sbjct: 238 LAEADIVISSTGA 250

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 417

>gnl|CDD|237433 PRK13576, PRK13576, 3-dehydroquinate dehydratase; Provisional

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 46  NASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR 105
           N   ADL+E+RLD LK+      I+ L K      + T R   EGG  + D+  ++ +L+
Sbjct: 22  NFLDADLIELRLDYLKDR-EVSVIEFLDKYKD-KLIVTLRDKAEGGINELDDELKISLLK 79

Query: 106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQAS 165
              +    Y DVE    +++N     K       IVS H + Y P+ E++  +V++    
Sbjct: 80  ELYDKQFLY-DVEASFLQKYNVPYDNK-------IVSIHYFDYLPTSEEVKEIVSKFYEK 131

Query: 166 GADIVKFATTALD 178
            A  VK A   L 
Sbjct: 132 -AFSVKIAVLGLK 143

Length = 216

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L GK+ +V GAG G G A A     +GARVV+A+     A+ +   + G AL+L 
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALR 55

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 435
           L GK+ VV G G G G+ LA  A   GA VV+A RT +R  E+A  +   G  AL++ 
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVP 60

Length = 258

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 43.4 bits (103), Expect = 2e-04
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 382 LAGKLFVVIGAGGA-GKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 435
           L GK+ V+ G GG  G A+A      GA+V I +R  ++A  +   +   GG AL++ 
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVK 65

Length = 278

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELA---ETVGGHALSL 434
           L GK+ +V GA  G G+A A    A+GA V IA R  DR   LA   E  GG AL L
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVL 57

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 4/120 (3%)

Query: 387 FVVIGAGGAGKALA-YGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPED- 444
            ++IGAGG G+ +A   A+     + +A+R+ ++A+ LA    G       ++  N E  
Sbjct: 1   VLIIGAGGVGQGVAPLLARHGDLEITVADRSLEKAQALAAPKLGLRFIAIAVDADNYEAL 60

Query: 445 -GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESGATIVSG 502
             ++      I + P      + K  +       D  Y       L  +A+++G T V G
Sbjct: 61  VALLKEGDLVINLAPPFLSLTVLKACIETGVHYVDTSYLREAQLALHEKAKDAGVTAVLG 120

This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 385 KLFVVIGAG-GAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGGHALSL-ADLENFN 441
           +  +V G   G G A+A     +GARVV+  +++ D A  LA+ +G  A++L AD+ +  
Sbjct: 6   QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDRE 65

Query: 442 PEDGMILANTTSIG 455
               M    T   G
Sbjct: 66  QVQAMFATATEHFG 79

Length = 253

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 4e-04
 Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 6/63 (9%)

Query: 383 AGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRT---YDRARELAETVGGHALSL-ADL 437
           AGK+ VV GA  G G+ +A  A A+GARVV+ +R+   ++ A EL    GG AL+L ADL
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAA-GGEALALTADL 65

Query: 438 ENF 440
           E +
Sbjct: 66  ETY 68

Length = 260

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 431
            G   +V+GAGG G   A  AKA GARV++ +R+ ++  ELA+ +G   
Sbjct: 134 PGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEK-LELAKELGADH 181

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 42.1 bits (100), Expect = 6e-04
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAGGA-GKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           LAGK+ +V GA G  GKA A    A+GA VV+A+   + A   A  +GG   +L 
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALG 474

Length = 681

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 9e-04
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 376 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 431
           G   ++LAGK+ VV GA  G G  LA    A+GA++ + +        LA  +GG  
Sbjct: 1   GPPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDD 57

Length = 296

>gnl|CDD|202773 pfam03807, F420_oxidored, NADP oxidoreductase coenzyme F420-dependent

 Score = 38.3 bits (90), Expect = 0.001
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)

Query: 389 VIGAGGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG 428
           +IGAG  G+ALA G  A G  VVIAN R  ++A  LAE +G
Sbjct: 4   IIGAGNMGEALARGLAAAGHEVVIANSRNPEKAAALAEELG 44

Length = 93

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L GK+ ++ G A G G+A+A    A+GARVVIA+    RAR  A  +G  A++++
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVS 58

Length = 257

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.8 bits (94), Expect = 0.002
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHALSLA 435
           L GK+ +V GA  G G+ +A    A+GARVV+ +R  + A  +A  +   G A+++A
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVA 59

Length = 251

>gnl|CDD|214966 smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain

 Score = 38.6 bits (91), Expect = 0.002
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 367 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 426
           G  G L    G       K  VVIGAG  G   A  AK  GA V + +    R R+L   
Sbjct: 6   GGFGML--LTGAGGVPPAK-VVVIGAGVVGLGAAATAKGLGAEVTVLDVRPARLRQLESL 62

Query: 427 VGGHALSLA 435
           +G    +L 
Sbjct: 63  LGARFTTLY 71

Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Length = 149

>gnl|CDD|240630 cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains

 Score = 39.7 bits (94), Expect = 0.003
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 376 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 430
           GGV      K+ V++GAG  G+  A  A   GA V + +   +R R L +  GG 
Sbjct: 161 GGVPGVPPAKV-VILGAGVVGENAARVALGLGAEVTVLDINLERLRYLDDIFGGR 214

Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms. Length = 359

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 384 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 427
            ++ VVIG G   G  L +G   +G RV +A+   ++A  +A+ +
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI 46

Length = 259

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	534
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	100.0
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	100.0
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	100.0
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	100.0
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	100.0
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	100.0
PRK12548	289	shikimate 5-dehydrogenase; Provisional	100.0
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	100.0
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	100.0
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	100.0
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	100.0
PRK02412	253	aroD 3-dehydroquinate dehydratase; Provisional	100.0
COG0710	231	AroD 3-dehydroquinate dehydratase [Amino acid tran	100.0
TIGR01093	228	aroD 3-dehydroquinate dehydratase, type I. Type II	100.0
PF01487	224	DHquinase_I: Type I 3-dehydroquinase; InterPro: IP	100.0
PRK13575	238	3-dehydroquinate dehydratase; Provisional	100.0
cd00502	225	DHQase_I Type I 3-dehydroquinase, (3-dehydroquinat	100.0
PRK13576	216	3-dehydroquinate dehydratase; Provisional	100.0
PRK01261	229	aroD 3-dehydroquinate dehydratase; Provisional	100.0
KOG0692	595	consensus Pentafunctional AROM protein [Amino acid	100.0
PF08501	83	Shikimate_dh_N: Shikimate dehydrogenase substrate	99.94
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	99.9
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	99.88
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	99.51
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	99.49
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	99.48
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	99.24
PRK08291	330	ectoine utilization protein EutC; Validated	99.18
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	99.16
PRK08306	296	dipicolinate synthase subunit A; Reviewed	99.04
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.99
PRK13940	414	glutamyl-tRNA reductase; Provisional	98.97
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	98.96
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.75
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.74
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.62
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.47
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.42
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.42
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.4
PLN00203	519	glutamyl-tRNA reductase	98.4
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	98.38
PRK06141	314	ornithine cyclodeaminase; Validated	98.35
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.29
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	98.23
PRK08339	263	short chain dehydrogenase; Provisional	98.23
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	98.22
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.21
PRK05872	296	short chain dehydrogenase; Provisional	98.21
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	98.2
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.2
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.19
KOG1208	314	consensus Dehydrogenases with different specificit	98.19
PRK05854	313	short chain dehydrogenase; Provisional	98.18
KOG0725	270	consensus Reductases with broad range of substrate	98.11
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.09
PRK08589	272	short chain dehydrogenase; Validated	98.08
PRK14982	340	acyl-ACP reductase; Provisional	98.08
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.08
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.06
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.05
PRK08618	325	ornithine cyclodeaminase; Validated	98.05
PRK07340	304	ornithine cyclodeaminase; Validated	98.02
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	98.02
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	98.01
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.01
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.01
PRK05717	255	oxidoreductase; Validated	97.98
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.98
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.97
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.96
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.96
PRK06139	330	short chain dehydrogenase; Provisional	97.94
PLN02780	320	ketoreductase/ oxidoreductase	97.93
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.93
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.92
PRK05867	253	short chain dehydrogenase; Provisional	97.92
PRK08265	261	short chain dehydrogenase; Provisional	97.91
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.91
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.9
PRK08862	227	short chain dehydrogenase; Provisional	97.9
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.9
PRK05876	275	short chain dehydrogenase; Provisional	97.9
PRK07063	260	short chain dehydrogenase; Provisional	97.88
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.88
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.87
PRK05866	293	short chain dehydrogenase; Provisional	97.87
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.86
PRK07825	273	short chain dehydrogenase; Provisional	97.86
PRK06196	315	oxidoreductase; Provisional	97.86
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.84
PRK07062	265	short chain dehydrogenase; Provisional	97.84
PRK07478	254	short chain dehydrogenase; Provisional	97.84
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.83
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	97.83
PRK06182	273	short chain dehydrogenase; Validated	97.82
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.8
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.8
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.78
PRK06197	306	short chain dehydrogenase; Provisional	97.77
PLN02253	280	xanthoxin dehydrogenase	97.77
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	97.76
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.76
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.76
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.75
PRK06720	169	hypothetical protein; Provisional	97.75
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.75
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.74
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.74
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.74
PRK12367	245	short chain dehydrogenase; Provisional	97.74
PRK07109	334	short chain dehydrogenase; Provisional	97.74
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.72
PRK06194	287	hypothetical protein; Provisional	97.72
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.7
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.69
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.69
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.69
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.69
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.68
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.68
PRK06500	249	short chain dehydrogenase; Provisional	97.67
PRK06949	258	short chain dehydrogenase; Provisional	97.67
PRK06057	255	short chain dehydrogenase; Provisional	97.67
PRK08303	305	short chain dehydrogenase; Provisional	97.67
PRK09242	257	tropinone reductase; Provisional	97.66
PRK07814	263	short chain dehydrogenase; Provisional	97.66
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.66
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	97.65
PRK09186	256	flagellin modification protein A; Provisional	97.65
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.65
PRK07791	286	short chain dehydrogenase; Provisional	97.65
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.65
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.65
PRK07067	257	sorbitol dehydrogenase; Provisional	97.64
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.64
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.64
PRK07060	245	short chain dehydrogenase; Provisional	97.64
PRK07890	258	short chain dehydrogenase; Provisional	97.63
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.62
PLN03209	576	translocon at the inner envelope of chloroplast su	97.62
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.62
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.61
PRK05855	582	short chain dehydrogenase; Validated	97.6
PRK07774	250	short chain dehydrogenase; Provisional	97.6
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.6
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	97.6
PRK06172	253	short chain dehydrogenase; Provisional	97.6
PRK06484	520	short chain dehydrogenase; Validated	97.59
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.59
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.59
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.58
PRK06125	259	short chain dehydrogenase; Provisional	97.58
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.58
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	97.58
PRK08643	256	acetoin reductase; Validated	97.58
PRK06114	254	short chain dehydrogenase; Provisional	97.58
PRK06138	252	short chain dehydrogenase; Provisional	97.58
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.58
PRK05993	277	short chain dehydrogenase; Provisional	97.57
PRK12742	237	oxidoreductase; Provisional	97.57
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	97.57
PRK07024	257	short chain dehydrogenase; Provisional	97.57
PRK07035	252	short chain dehydrogenase; Provisional	97.55
PRK08251	248	short chain dehydrogenase; Provisional	97.55
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.55
PRK06180	277	short chain dehydrogenase; Provisional	97.55
PRK07576	264	short chain dehydrogenase; Provisional	97.54
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.53
PRK09072	263	short chain dehydrogenase; Provisional	97.53
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.53
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.53
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.53
PRK06484	520	short chain dehydrogenase; Validated	97.52
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.52
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.52
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.52
PLN02928	347	oxidoreductase family protein	97.52
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.51
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	97.51
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	97.51
PRK06398	258	aldose dehydrogenase; Validated	97.5
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.5
PRK06046	326	alanine dehydrogenase; Validated	97.5
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.5
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.49
PRK07677	252	short chain dehydrogenase; Provisional	97.48
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.48
PRK08628	258	short chain dehydrogenase; Provisional	97.47
PRK12939	250	short chain dehydrogenase; Provisional	97.46
PRK06483	236	dihydromonapterin reductase; Provisional	97.45
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.45
PRK09291	257	short chain dehydrogenase; Provisional	97.45
PRK07454	241	short chain dehydrogenase; Provisional	97.44
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.44
PRK06940	275	short chain dehydrogenase; Provisional	97.43
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.43
PRK08177	225	short chain dehydrogenase; Provisional	97.42
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.42
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.42
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.42
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.42
PRK13243	333	glyoxylate reductase; Reviewed	97.41
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.41
PRK08267	260	short chain dehydrogenase; Provisional	97.4
PRK12829	264	short chain dehydrogenase; Provisional	97.4
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.39
PRK05599	246	hypothetical protein; Provisional	97.38
PRK05884	223	short chain dehydrogenase; Provisional	97.38
PRK07832	272	short chain dehydrogenase; Provisional	97.38
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	97.38
PRK05693	274	short chain dehydrogenase; Provisional	97.38
PRK07856	252	short chain dehydrogenase; Provisional	97.37
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.37
PRK12828	239	short chain dehydrogenase; Provisional	97.37
PRK06841	255	short chain dehydrogenase; Provisional	97.37
PRK07326	237	short chain dehydrogenase; Provisional	97.36
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.36
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.36
PRK10538	248	malonic semialdehyde reductase; Provisional	97.35
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.35
PRK08278	273	short chain dehydrogenase; Provisional	97.35
PLN00015	308	protochlorophyllide reductase	97.35
PRK05875	276	short chain dehydrogenase; Provisional	97.34
PRK06823	315	ornithine cyclodeaminase; Validated	97.33
PRK07831	262	short chain dehydrogenase; Provisional	97.33
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.32
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	97.31
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.31
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.31
PRK07201	657	short chain dehydrogenase; Provisional	97.31
PRK07904	253	short chain dehydrogenase; Provisional	97.31
PRK06523	260	short chain dehydrogenase; Provisional	97.31
PRK07074	257	short chain dehydrogenase; Provisional	97.3
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.29
PRK08263	275	short chain dehydrogenase; Provisional	97.29
PRK12747	252	short chain dehydrogenase; Provisional	97.29
PRK05650	270	short chain dehydrogenase; Provisional	97.28
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.28
PRK06128	300	oxidoreductase; Provisional	97.27
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	97.27
PRK06482	276	short chain dehydrogenase; Provisional	97.27
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.26
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	97.26
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.25
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	97.24
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.24
PRK06914	280	short chain dehydrogenase; Provisional	97.24
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.22
PRK06179	270	short chain dehydrogenase; Provisional	97.21
PRK07806	248	short chain dehydrogenase; Provisional	97.2
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.2
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.2
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.19
PRK06181	263	short chain dehydrogenase; Provisional	97.19
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.18
PRK07102	243	short chain dehydrogenase; Provisional	97.18
PRK06101	240	short chain dehydrogenase; Provisional	97.18
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.18
PRK08324	681	short chain dehydrogenase; Validated	97.16
PRK07985	294	oxidoreductase; Provisional	97.16
PRK08226	263	short chain dehydrogenase; Provisional	97.16
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	97.15
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	97.15
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.14
PRK06407	301	ornithine cyclodeaminase; Provisional	97.14
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.14
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.14
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.13
PRK12743	256	oxidoreductase; Provisional	97.13
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	97.13
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.13
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.12
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	97.12
PRK06701	290	short chain dehydrogenase; Provisional	97.11
PRK08264	238	short chain dehydrogenase; Validated	97.11
PRK07589	346	ornithine cyclodeaminase; Validated	97.11
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	97.11
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.1
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	97.09
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.09
PRK06198	260	short chain dehydrogenase; Provisional	97.09
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.09
PLN02494	477	adenosylhomocysteinase	97.08
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	97.07
PRK12746	254	short chain dehydrogenase; Provisional	97.07
PRK06199	379	ornithine cyclodeaminase; Validated	97.07
PRK08328	231	hypothetical protein; Provisional	97.07
PRK09134	258	short chain dehydrogenase; Provisional	97.05
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.05
PRK07775	274	short chain dehydrogenase; Provisional	97.05
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.04
PRK12480	330	D-lactate dehydrogenase; Provisional	97.04
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	97.03
KOG0409	327	consensus Predicted dehydrogenase [General functio	97.02
PRK12937	245	short chain dehydrogenase; Provisional	97.02
COG1028	251	FabG Dehydrogenases with different specificities (	97.01
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	97.01
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	97.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	96.99
PRK09135	249	pteridine reductase; Provisional	96.99
PRK08703	239	short chain dehydrogenase; Provisional	96.98
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	96.97
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	96.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.96
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.95
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.94
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.93
PRK08655	437	prephenate dehydrogenase; Provisional	96.93
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	96.92
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.92
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.91
PRK12744	257	short chain dehydrogenase; Provisional	96.91
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.9
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.9
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.9
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.89
PRK05479	330	ketol-acid reductoisomerase; Provisional	96.87
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.87
PRK07417	279	arogenate dehydrogenase; Reviewed	96.87
PRK06436	303	glycerate dehydrogenase; Provisional	96.86
PRK07069	251	short chain dehydrogenase; Validated	96.86
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.85
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.85
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.85
PRK06953	222	short chain dehydrogenase; Provisional	96.83
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.83
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	96.83
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.83
PRK12827	249	short chain dehydrogenase; Provisional	96.82
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.81
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.8
PRK08605	332	D-lactate dehydrogenase; Validated	96.79
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.79
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.78
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.78
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.78
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	96.77
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.72
PRK07041	230	short chain dehydrogenase; Provisional	96.72
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.71
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.7
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.7
PRK07574	385	formate dehydrogenase; Provisional	96.7
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.7
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.69
PLN02896	353	cinnamyl-alcohol dehydrogenase	96.69
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.68
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	96.67
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.67
PLN03139	386	formate dehydrogenase; Provisional	96.67
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	96.66
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	96.66
PRK13403	335	ketol-acid reductoisomerase; Provisional	96.66
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.65
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.64
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	96.63
KOG4230	935	consensus C1-tetrahydrofolate synthase [Coenzyme t	96.61
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.59
PRK08219	227	short chain dehydrogenase; Provisional	96.59
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	96.59
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	96.59
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.58
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.57
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.56
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.54
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.53
PRK06487	317	glycerate dehydrogenase; Provisional	96.53
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	96.52
PRK07577	234	short chain dehydrogenase; Provisional	96.52
PRK06123	248	short chain dehydrogenase; Provisional	96.51
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.51
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	96.5
PLN02256	304	arogenate dehydrogenase	96.48
PRK06932	314	glycerate dehydrogenase; Provisional	96.48
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.47
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.46
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.46
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	96.44
PLN02306	386	hydroxypyruvate reductase	96.4
PLN02712	667	arogenate dehydrogenase	96.38
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.36
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.36
PLN02650	351	dihydroflavonol-4-reductase	96.35
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.35
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.34
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.34
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.34
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	96.34
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	96.32
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	96.3
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.28
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	96.28
PLN00198	338	anthocyanidin reductase; Provisional	96.27
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	96.27
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.27
PLN02214	342	cinnamoyl-CoA reductase	96.24
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.24
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.23
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.22
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.22
PLN02686	367	cinnamoyl-CoA reductase	96.21
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.21
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.19
PLN02653	340	GDP-mannose 4,6-dehydratase	96.19
PRK06545	359	prephenate dehydrogenase; Validated	96.15
PLN02712	667	arogenate dehydrogenase	96.14
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.13
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.11
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	96.11
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.1
PRK07578	199	short chain dehydrogenase; Provisional	96.09
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.08
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.06
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.04
PRK08017	256	oxidoreductase; Provisional	96.04
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.02
PRK08223	287	hypothetical protein; Validated	95.99
PRK06924	251	short chain dehydrogenase; Provisional	95.99
PRK15059	292	tartronate semialdehyde reductase; Provisional	95.98
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	95.98
CHL00194	317	ycf39 Ycf39; Provisional	95.98
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	95.97
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	95.97
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.96
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.95
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	95.94
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.93
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	95.91
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	95.9
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.88
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	95.87
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	95.83
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.82
PRK08507	275	prephenate dehydrogenase; Validated	95.81
PF00208	244	ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Val	95.8
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.77
COG3268	382	Uncharacterized conserved protein [Function unknow	95.76
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.73
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	95.7
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.68
KOG3007	333	consensus Mu-crystallin [Amino acid transport and	95.66
PRK07232	752	bifunctional malic enzyme oxidoreductase/phosphotr	95.64
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	95.64
PRK04690	468	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.64
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.63
PLN02858	1378	fructose-bisphosphate aldolase	95.61
PRK01390	460	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.61
PRK07680	273	late competence protein ComER; Validated	95.6
PLN02427	386	UDP-apiose/xylose synthase	95.56
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.56
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	95.55
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.55
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	95.54
PLN02240	352	UDP-glucose 4-epimerase	95.53
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	95.52
PRK08818	370	prephenate dehydrogenase; Provisional	95.51
cd04726	202	KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl	95.49
PLN02688	266	pyrroline-5-carboxylate reductase	95.47
PRK09496	453	trkA potassium transporter peripheral membrane com	95.42
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	95.42
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.41
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.4
PLN02477	410	glutamate dehydrogenase	95.39
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.38
COG0673	342	MviM Predicted dehydrogenases and related proteins	95.37
PTZ00117	319	malate dehydrogenase; Provisional	95.36
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	95.36
PRK01368	454	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.35
cd00958	235	DhnA Class I fructose-1,6-bisphosphate (FBP) aldol	95.34
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	95.34
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	95.33
COG5322	351	Predicted dehydrogenase [General function predicti	95.32
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.29
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.26
PRK03803	448	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.26
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	95.25
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	95.25
PRK09140	206	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; R	95.24
TIGR03128	206	RuMP_HxlA 3-hexulose-6-phosphate synthase. at the	95.21
PRK09496	453	trkA potassium transporter peripheral membrane com	95.2
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	95.19
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	95.17
PLN02858	1378	fructose-bisphosphate aldolase	95.16
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.14
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.14
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	95.13
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	95.12
PRK09009	235	C factor cell-cell signaling protein; Provisional	95.12
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	95.11
cd04740	296	DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c	95.09
PRK09414	445	glutamate dehydrogenase; Provisional	95.09
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	95.09
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.09
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.04
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.02
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.02
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.0
COG0281	432	SfcA Malic enzyme [Energy production and conversio	95.0
PLN02206	442	UDP-glucuronate decarboxylase	94.97

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=100.00  E-value=9.6e-121  Score=989.34  Aligned_cols=523  Identities=82%  Similarity=1.259  Sum_probs=470.9

Q ss_pred             ccccccccccCCCCCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccC
Q 009464            8 VASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPI   87 (534)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~   87 (534)
                      .||.---+|++|++.+|+|||||++++.++++.+++.+...++|+||||+|+|.+.++.+++..+++..++|+|||+|++
T Consensus         7 ~~~~~~~~~~~~~~~~~~icv~i~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~~~~~~~~~~~plI~T~R~~   86 (529)
T PLN02520          7 LASDDLQGSGGVRRNPTLICVPIMADSVDKMLIEMAKAKELGADLVEIRLDFLKNFNPREDLKTLIKQSPLPTLVTYRPK   86 (529)
T ss_pred             chhhhhhcccccccCCCEEEEEeCCCCHHHHHHHHHHhhhcCCCEEEEEeccccccCCHHHHHHHHhcCCCcEEEEeccH
Confidence            34555568999999999999999999999999999887778999999999999876555567777777789999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCC
Q 009464           88 WEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGA  167 (534)
Q Consensus        88 ~eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~ga  167 (534)
                      +|||.|++++++|+++++.+++.++||||||++..++..+.+...++.++++|+|||||++||+.+||.+++++|.++||
T Consensus        87 ~eGG~~~~~~~~~~~ll~~~~~~~~d~iDiEl~~~~~~~~~~~~~~~~~~~vI~S~H~f~~tP~~~el~~~~~~~~~~ga  166 (529)
T PLN02520         87 WEGGQYEGDENKRQDALRLAMELGADYVDVELKVAHEFINSISGKKPEKCKVIVSSHNYENTPSVEELGNLVARIQATGA  166 (529)
T ss_pred             HHCCCCCCCHHHHHHHHHHHHHhCCCEEEEEcCCchhHHHHHHhhhhcCCEEEEEecCCCCCCCHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999998876666655666899999999999999999999999999999999


Q ss_pred             CEEEEEcccCCHHHHHHHHHHHhhccCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhh
Q 009464          168 DIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY  247 (534)
Q Consensus       168 Di~Kia~~~~~~~D~~~l~~~~~~~~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~  247 (534)
                      ||+|||+||++.+|++++++++.+.   +.|+|+||||+.|++||+++++|||++||++++.+.++||||+++++++++|
T Consensus       167 Di~Kia~~~~~~~D~~~ll~~~~~~---~~p~i~~~MG~~G~~sRi~~~~~GS~lTy~~~~~~~~sAPGQ~~~~~l~~~~  243 (529)
T PLN02520        167 DIVKIATTALDITDVARMFQITVHS---QVPTIGLVMGERGLISRILCPKFGGYLTFGTLEAGKVSAPGQPTIKDLLDLY  243 (529)
T ss_pred             CEEEEecCCCCHHHHHHHHHHHhhc---CCCEEEEecCCCCchheecccccCCceeeeecCcccccCCCCCCHHHHHHHh
Confidence            9999999999999999999887654   5899999999999999999999999999999986557999999999999999


Q ss_pred             hccccCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccccHHHHHHHhcCCCCCEEEeccchHHHHhhcccc
Q 009464          248 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  327 (534)
Q Consensus       248 ~~~~~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~  327 (534)
                      ++.+++++|++|||||+||+||+||.|||++|+++|+|+.|.++++++++++++.++.++|+|+|||||||+++++++|+
T Consensus       244 ~~~~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~  323 (529)
T PLN02520        244 NFRQIGPDTKVYGIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLVDDLAKFLQTYSSPDFAGFSCTIPHKEDALKCCDE  323 (529)
T ss_pred             hhhcccCCceEEEEEcCCcccccCHHHHHHHHHHCCCCcEEEEeehhhHHHHHHHHhhCCCCEEEECcCCHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCC
Q 009464          328 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG  407 (534)
Q Consensus       328 ~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G  407 (534)
                      +|+.|+.+||||||++++++|+|+||||||.||+++|++.+...+..+ ..+.++++|+++|+|+||+|++++++|++.|
T Consensus       324 ~~~~A~~iGAVNTvv~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~-~~~~~~~~k~vlIlGaGGagrAia~~L~~~G  402 (529)
T PLN02520        324 VDPIAKSIGAINTIIRRPSDGKLVGYNTDYIGAISAIEDGLRASGSSP-ASGSPLAGKLFVVIGAGGAGKALAYGAKEKG  402 (529)
T ss_pred             CCHHHHHhCCceEEEEeCCCCEEEEEcccHHHHHHHHHhhhccccccc-ccccCCCCCEEEEECCcHHHHHHHHHHHHCC
Confidence            999999999999999862279999999999999999975432100000 0124577899999999999999999999999


Q ss_pred             CeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhH
Q 009464          408 ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR  487 (534)
Q Consensus       408 ~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~  487 (534)
                      ++|+++||+.++++++++.++.....++++.+.....+|+||||||+||.|..+..|++..++++..+|+|++|+|.+|+
T Consensus       403 ~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~T~  482 (529)
T PLN02520        403 ARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKITR  482 (529)
T ss_pred             CEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCCcCH
Confidence            99999999999999999888654445554433122357999999999999876667888888888899999999999999


Q ss_pred             HHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhC
Q 009464          488 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY  534 (534)
Q Consensus       488 ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~~  534 (534)
                      |+++|+++||++++|++||++||+.||++|||.++|.+.|++++++|
T Consensus       483 ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~~~~l~~~  529 (529)
T PLN02520        483 LLREAEESGAIIVSGTEMFIRQAYEQFERFTGLPAPKELFREIMSKY  529 (529)
T ss_pred             HHHHHHHCCCeEeCcHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhC
Confidence            99999999999999999999999999999999999999999999998

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=100.00  E-value=1.7e-104  Score=853.04  Aligned_cols=461  Identities=30%  Similarity=0.428  Sum_probs=410.5

Q ss_pred             EEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 009464           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL  104 (534)
Q Consensus        25 ~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l  104 (534)
                      +|||||++++.++++++++.+. .++|+||||+|+|++.++.+ +..+++..+.||+ |+|+.+     .+++++|++++
T Consensus         1 ~icv~i~~~~~~e~~~~~~~~~-~~~D~vE~R~D~~~~~~~~~-~~~l~~~~~~pil-T~R~~~-----~~~~~~~~~~l   72 (477)
T PRK09310          1 MLCATISGPSFLEAKQQILRSL-KLVDCIELRVDLLLSLSDLE-LKKLIELAPIPIL-TWKKHE-----SCSQAAWIDKM   72 (477)
T ss_pred             CEEEEecCCCHHHHHHHHHHhc-ccCCEEEEEehhhccCCHHH-HHHHHhcCCCceE-EeccCc-----cCCHHHHHHHH
Confidence            6999999999999999999876 67999999999998765543 6777664466766 999987     46889999999


Q ss_pred             HHHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCCHHHHHH
Q 009464          105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVAR  184 (534)
Q Consensus       105 ~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~~~D~~~  184 (534)
                      +.+++.++||||||++.+++.++++... ++++|+|+|||||+.    +++.+++++|.++||||+|||+||++.+|+++
T Consensus        73 ~~~~~~~~d~vDiEl~~~~~~~~~l~~~-~~~~kvI~S~Hdf~~----~~l~~~~~~~~~~gaDi~Kia~~a~~~~D~l~  147 (477)
T PRK09310         73 QSLAKLNPNYLDIDKDFPKEALIRIRKL-HPKIKIILSYHTSEH----EDIIQLYNEMLASAADYYKIAVSSSSSTDLLN  147 (477)
T ss_pred             HHHHHhCCCEEEEEecCCHHHHHHHHHh-CCCCEEEEEcCCCCc----chHHHHHHHHHHcCCCEEEEeeCCCCHHHHHH
Confidence            9999999999999999988888777543 459999999999943    57999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhccccCCCccEEEecCC
Q 009464          185 VFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGK  264 (534)
Q Consensus       185 l~~~~~~~~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~~~~~~~t~~~~liG~  264 (534)
                      +++++.+..   .|+|+|+||+.|++||+++++|||++||+++..+.++||||++++++. .|++.+++++|++|||||+
T Consensus       148 ll~~~~~~~---~p~i~i~MG~~G~~SRil~~~~gS~~Tfa~~~~~~~~APGQi~~~~l~-~~~~~~~~~~t~~~~liG~  223 (477)
T PRK09310        148 IIHQKRSLP---ENTTVLCMGGMGRPSRILSPLLQNAFNYAAGIGAPPVAPGQLSLEHLL-FYNYANLSAQSPIYGLIGD  223 (477)
T ss_pred             HHHHHhhCC---CCEEEEEeCCCchHHhhcchhhcCccccccccCccccCCCCcCHHHHH-hcchhccCCCceEEEEECC
Confidence            999986643   689999999999999999999999999999876445899999999998 5788889889999999999


Q ss_pred             CccccCCHHHHHHHHHHcCCCeEEEecccc--cHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEE
Q 009464          265 PVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCII  342 (534)
Q Consensus       265 pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~  342 (534)
                      ||+||+||.|||++|+++|+|++|.+++++  ++.++++.++.++|.|+|||||||++|++++|++|+.|+.+||||||+
T Consensus       224 pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~~~~~A~~iGAVNTv~  303 (477)
T PRK09310        224 PVDRSISHLSHNPLFSQLSLNCPYIKLPLTPQELPKFFSTIRDLPFLGLSVTMPLKTAVLDFLDKLDPSVKLCGSCNTLV  303 (477)
T ss_pred             CcccccCHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHHhCCCCEEEECccCHHHHHHHhccCCHHHHHhCcceEEE
Confidence            999999999999999999999999999984  799999999999999999999999999999999999999999999999


Q ss_pred             EeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 009464          343 RRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE  422 (534)
Q Consensus       343 ~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~  422 (534)
                      ++  +|+|+||||||.||+.+|++.           +.++++++++|+|+||+|+++++.|.+.|++|+++||+.+++++
T Consensus       304 ~~--~g~l~G~NTD~~G~~~~l~~~-----------~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~  370 (477)
T PRK09310        304 FR--NGKIEGYNTDGEGLFSLLKQK-----------NIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEA  370 (477)
T ss_pred             ee--CCEEEEEecCHHHHHHHHHhc-----------CCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            87  899999999999999998642           24567899999999999999999999999999999999999999


Q ss_pred             HHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEecc
Q 009464          423 LAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG  502 (534)
Q Consensus       423 la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~G  502 (534)
                      +++.++....+++++.+  ...+|+||||||.++.       ++. .+.  .+|+|++|+|..|+|+++|+++||++++|
T Consensus       371 la~~~~~~~~~~~~~~~--l~~~DiVInatP~g~~-------~~~-~l~--~~v~D~~Y~P~~T~ll~~A~~~G~~~~~G  438 (477)
T PRK09310        371 LASRCQGKAFPLESLPE--LHRIDIIINCLPPSVT-------IPK-AFP--PCVVDINTLPKHSPYTQYARSQGSSIIYG  438 (477)
T ss_pred             HHHHhccceechhHhcc--cCCCCEEEEcCCCCCc-------chh-HHh--hhEEeccCCCCCCHHHHHHHHCcCEEECc
Confidence            98877544444444433  3568999999999872       222 222  48999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCHHHH
Q 009464          503 LEMFIGQAYEQYERFTGLPAPKELF  527 (534)
Q Consensus       503 l~ml~~Qa~~qf~lwtg~~~p~~~~  527 (534)
                      ++||++||+.||++|||++.+++..
T Consensus       439 ~~Ml~~Qa~~~f~lw~g~~~~~~~~  463 (477)
T PRK09310        439 YEMFAEQALLQFRLWFPTLLFKHLE  463 (477)
T ss_pred             HHHHHHHHHHHHHHHcCCcccHHHH
Confidence            9999999999999999999998754

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.1e-68  Score=531.46  Aligned_cols=270  Identities=40%  Similarity=0.659  Sum_probs=241.2

Q ss_pred             cCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccc--cHHHHHHHhcCCCCCEEEeccchHHHHhhcccccC
Q 009464          252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  329 (534)
Q Consensus       252 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~  329 (534)
                      ++.+|++|||||+||+||+||.|||++|+++|+|+.|.+|+++  +++++++.++.+++.|+|||||||+++++++|++|
T Consensus         2 ~~~~t~~~~viG~Pi~HS~SP~~Hn~~~~~lGl~~~Y~a~~v~~~~l~~~v~~~~~~g~~G~NVTiP~Ke~~~~~lD~l~   81 (283)
T COG0169           2 MNGKTKLFGVIGNPISHSLSPRMHNAAFRALGLDYVYLAFEVPPEDLPEAVSGIRALGFRGLNVTIPFKEAALPLLDELS   81 (283)
T ss_pred             CCCCceEEEEEcCCcccCcCHHHHHHHHHHcCCCceEEEeecCHHHHHHHHHHHHhcCCCeeEECCccHHHHHHHHhcCC
Confidence            5667899999999999999999999999999999999999995  99999999999999999999999999999999999


Q ss_pred             HHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-
Q 009464          330 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  408 (534)
Q Consensus       330 ~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-  408 (534)
                      +.|+.+||||||+++. +|+|+||||||.||.++|++...         ..+..+++++|+||||++||++++|++.|+ 
T Consensus        82 ~~A~~iGAVNTl~~~~-~g~l~G~NTD~~G~~~~L~~~~~---------~~~~~~~~vlilGAGGAarAv~~aL~~~g~~  151 (283)
T COG0169          82 PRARLIGAVNTLVRED-DGKLRGYNTDGIGFLRALKEFGL---------PVDVTGKRVLILGAGGAARAVAFALAEAGAK  151 (283)
T ss_pred             HHHHHhCCceEEEEcc-CCEEEEEcCCHHHHHHHHHhcCC---------CcccCCCEEEEECCcHHHHHHHHHHHHcCCC
Confidence            9999999999999982 49999999999999999876311         135568999999999999999999999998 


Q ss_pred             eEEEEeCCHHHHHHHHHHHcCcc-----cccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          409 RVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       409 ~v~i~~R~~~~a~~la~~~~~~~-----~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      +|+|+|||.+|+++|++.++...     ..+.++..  ...+|+||||||+||.+.....+++.+.+.+..+++|++|+|
T Consensus       152 ~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~--~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P  229 (283)
T COG0169         152 RITVVNRTRERAEELADLFGELGAAVEAAALADLEG--LEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNP  229 (283)
T ss_pred             EEEEEeCCHHHHHHHHHHhhhccccccccccccccc--ccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCC
Confidence            89999999999999999987432     12223322  115899999999999986444466667788999999999999


Q ss_pred             ChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          484 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       484 ~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      .+|||+++|+++|+++++|++||++||+++|++|||.++|.+.|++++.+
T Consensus       230 ~~TplL~~A~~~G~~~idGl~Mlv~Qaa~aF~lwtg~~p~~~~~~~a~~~  279 (283)
T COG0169         230 LETPLLREARAQGAKTIDGLGMLVHQAAEAFELWTGVEPPVDVMKEALIE  279 (283)
T ss_pred             CCCHHHHHHHHcCCeEECcHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987653

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-67  Score=530.78  Aligned_cols=265  Identities=28%  Similarity=0.403  Sum_probs=234.7

Q ss_pred             CccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc-------ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccc
Q 009464          255 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  327 (534)
Q Consensus       255 ~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~-------~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~  327 (534)
                      ++++|||||+||+||+||.|||++|+++|+|++|.+|++       ++++++++.++.++|.|+|||||||++++++||+
T Consensus         3 ~~~~~gliG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~lD~   82 (283)
T PRK14027          3 DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDE   82 (283)
T ss_pred             CceEEEEECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhcCCCEEEECccCHHHHHHHhhh
Confidence            578999999999999999999999999999999999996       3789999999889999999999999999999999


Q ss_pred             cCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCC
Q 009464          328 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG  407 (534)
Q Consensus       328 ~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G  407 (534)
                      +|+.|+.+||||||+++. +|+|+||||||.||+++|++..           .+.++|+++|+||||+|||++++|+++|
T Consensus        83 l~~~A~~iGAVNTv~~~~-~g~l~G~NTD~~Gf~~~L~~~~-----------~~~~~k~vlilGaGGaarAi~~aL~~~g  150 (283)
T PRK14027         83 VSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEGL-----------PNAKLDSVVQVGAGGVGNAVAYALVTHG  150 (283)
T ss_pred             CCHHHHHhCCceEEEECC-CCcEEEEcCCHHHHHHHHHhcC-----------cCcCCCeEEEECCcHHHHHHHHHHHHCC
Confidence            999999999999999853 8999999999999999986421           2456899999999999999999999999


Q ss_pred             C-eEEEEeCCHHHHHHHHHHHcCcc----c---ccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEE
Q 009464          408 A-RVVIANRTYDRARELAETVGGHA----L---SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  479 (534)
Q Consensus       408 ~-~v~i~~R~~~~a~~la~~~~~~~----~---~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv  479 (534)
                      + +|+|+||+.+|++++++.+....    .   ++.++.+ ....+|+||||||+||.+. +..|++...+.+..+|+|+
T Consensus       151 ~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~-~~~~~divINaTp~Gm~~~-~~~~~~~~~l~~~~~v~D~  228 (283)
T PRK14027        151 VQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIED-VIAAADGVVNATPMGMPAH-PGTAFDVSCLTKDHWVGDV  228 (283)
T ss_pred             CCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHH-HHhhcCEEEEcCCCCCCCC-CCCCCCHHHcCCCcEEEEc
Confidence            9 89999999999999998874211    1   1111122 2346899999999999864 3456766778888899999


Q ss_pred             ecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          480 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       480 ~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +|+|.+|+|+++|+++||++++|++||++||++||++|||.++|.+.|++++++
T Consensus       229 vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lw~G~~~~~~~~~~~~~~  282 (283)
T PRK14027        229 VYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRMRETFLS  282 (283)
T ss_pred             ccCCCCCHHHHHHHHCCCEEEccHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999998764

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=100.00  E-value=4.1e-67  Score=528.71  Aligned_cols=266  Identities=30%  Similarity=0.401  Sum_probs=238.4

Q ss_pred             CCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccc-------cHHHHHHHhcCCCCCEEEeccchHHHHhhcc
Q 009464          253 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD-------DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC  325 (534)
Q Consensus       253 ~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~-------~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~l  325 (534)
                      +..+++|||||+||+||+||.|||++|+++|+|++|.+++++       +++++++.++.++|.|+|||||||+++++++
T Consensus         2 ~~~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~~   81 (284)
T PRK12549          2 SRPSFLAGLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAERMGFAGLNITHPCKQAVIPHL   81 (284)
T ss_pred             CccceEEEEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHh
Confidence            345789999999999999999999999999999999999863       6899999998889999999999999999999


Q ss_pred             cccCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHH
Q 009464          326 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA  405 (534)
Q Consensus       326 d~~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~  405 (534)
                      |++|+.|+.+||||||+++  +|+|+||||||.||+++|++..           .++++|+++|+|+||+||+++++|++
T Consensus        82 D~~~~~A~~iGAvNTv~~~--~g~l~G~NTD~~G~~~~l~~~~-----------~~~~~k~vlIlGaGGaaraia~aL~~  148 (284)
T PRK12549         82 DELSDDARALGAVNTVVFR--DGRRIGHNTDWSGFAESFRRGL-----------PDASLERVVQLGAGGAGAAVAHALLT  148 (284)
T ss_pred             ccCCHHHHHhCCceEEEec--CCEEEEEcCCHHHHHHHHHhhc-----------cCccCCEEEEECCcHHHHHHHHHHHH
Confidence            9999999999999999886  8999999999999999987531           24567999999999999999999999


Q ss_pred             CCC-eEEEEeCCHHHHHHHHHHHcCc-----ccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEE
Q 009464          406 KGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  479 (534)
Q Consensus       406 ~G~-~v~i~~R~~~~a~~la~~~~~~-----~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv  479 (534)
                      .|+ +|+|+||+.++++++++.+...     ...++++.+ ....+|+||||||+||.+. +..|++..++.+..+|+|+
T Consensus       149 ~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~-~~~~aDiVInaTp~Gm~~~-~~~~~~~~~l~~~~~v~Di  226 (284)
T PRK12549        149 LGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAA-ALAAADGLVHATPTGMAKH-PGLPLPAELLRPGLWVADI  226 (284)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHh-hhCCCCEEEECCcCCCCCC-CCCCCCHHHcCCCcEEEEe
Confidence            999 8999999999999999887422     122333333 3456899999999999875 3457777788888999999


Q ss_pred             ecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          480 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       480 ~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|++.+++
T Consensus       227 vY~P~~T~ll~~A~~~G~~~~~G~~ML~~Qa~~~f~~wtg~~~~~~~~~~~~~~  280 (284)
T PRK12549        227 VYFPLETELLRAARALGCRTLDGGGMAVFQAVDAFELFTGREPDAERMLAHFAS  280 (284)
T ss_pred             eeCCCCCHHHHHHHHCCCeEecCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999998876

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=100.00  E-value=4.4e-67  Score=528.39  Aligned_cols=266  Identities=31%  Similarity=0.518  Sum_probs=235.0

Q ss_pred             cCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccc--cHHHHHHHhcCCCCCEEEeccchHHHHhhcccccC
Q 009464          252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  329 (534)
Q Consensus       252 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~  329 (534)
                      ++.+|++|||||+||+||+||.|||++|+++|+|++|.+++++  +++++++.++..+|.|+|||||||++|++++|++|
T Consensus         3 ~~~~t~~~gliG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~~~~~~D~l~   82 (288)
T PRK12749          3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELT   82 (288)
T ss_pred             cCCCceEEEEECCCcccccCHHHHHHHHHHcCCCeEEEEEecCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhccCC
Confidence            4567899999999999999999999999999999999999994  79999999988899999999999999999999999


Q ss_pred             HHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-
Q 009464          330 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  408 (534)
Q Consensus       330 ~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-  408 (534)
                      +.|+.+||||||+++  +|+|+||||||.||+++|++.           +.++++|+++|+||||+|||++++|+.+|+ 
T Consensus        83 ~~A~~iGAVNTv~~~--~g~l~G~NTD~~Gf~~~l~~~-----------~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~  149 (288)
T PRK12749         83 PAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-----------GFDIKGKTMVLLGAGGASTAIGAQGAIEGLK  149 (288)
T ss_pred             HHHHHhCceeEEEcc--CCEEEEEecCHHHHHHHHHhc-----------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCC
Confidence            999999999999876  899999999999999998642           245678999999999999999999999999 


Q ss_pred             eEEEEeCC---HHHHHHHHHHHcCc------cccccc---ccccCCCCceEEEEcCCCCCCCCCCCCC-CCccccCCCCE
Q 009464          409 RVVIANRT---YDRARELAETVGGH------ALSLAD---LENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYAL  475 (534)
Q Consensus       409 ~v~i~~R~---~~~a~~la~~~~~~------~~~~~~---~~~~~~~~~divVn~t~~g~~~~~~~~~-i~~~~l~~~~~  475 (534)
                      +|+|+||+   .++++++++.+...      ...+++   +.+ ....+|+||||||+||.|..+..+ ++...+++..+
T Consensus       150 ~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~-~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~  228 (288)
T PRK12749        150 EIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE-ALASADILTNGTKVGMKPLENESLVNDISLLHPGLL  228 (288)
T ss_pred             EEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhh-hcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCE
Confidence            99999999   46999999887532      112221   112 235689999999999988654433 34456778889


Q ss_pred             EEEEecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 009464          476 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM  531 (534)
Q Consensus       476 v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~  531 (534)
                      |+|++|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|++++
T Consensus       229 v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~ML~~Qa~~~f~lwtg~~~~~~~~~~~~  284 (288)
T PRK12749        229 VTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVM  284 (288)
T ss_pred             EEEecCCCccCHHHHHHHHCCCeEECCHHHHHHHHHHHHHHhcCCCCCHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999875

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-66  Score=526.02  Aligned_cols=267  Identities=34%  Similarity=0.539  Sum_probs=237.4

Q ss_pred             cCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccc--cHHHHHHHhcCCCCCEEEeccchHHHHhhcccccC
Q 009464          252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  329 (534)
Q Consensus       252 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~  329 (534)
                      ++.+|++|||||+||+||+||.|||++|+++|+|+.|.+|+++  +++++++.++..+|+|+|||||||++|++++|++|
T Consensus         5 ~~~~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~ld~~~   84 (289)
T PRK12548          5 ISGTTGLLGLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFDIPVDKVPDAIKAIKTFNMRGANVTMPCKSEAAKYMDELS   84 (289)
T ss_pred             cCCceeEEEEEcCCcccccCHHHHHHHHHHcCCCEEEEEEecCHHHHHHHHHHHHHCCCCEEEECccCHHHHHHHhhcCC
Confidence            5667889999999999999999999999999999999999994  79999999988899999999999999999999999


Q ss_pred             HHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-
Q 009464          330 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  408 (534)
Q Consensus       330 ~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-  408 (534)
                      +.|+.+||||||+++  +|+|+||||||.||+++|++.           ...+++|+++|+||||+|||++++|++.|+ 
T Consensus        85 ~~A~~iGavNTi~~~--~g~l~G~NTD~~G~~~~l~~~-----------~~~~~~k~vlI~GAGGagrAia~~La~~G~~  151 (289)
T PRK12548         85 PAARIIGAVNTIVND--DGKLTGHITDGLGFVRNLREH-----------GVDVKGKKLTVIGAGGAATAIQVQCALDGAK  151 (289)
T ss_pred             HHHHHhCceeEEEeE--CCEEEEEecCHHHHHHHHHhc-----------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCC
Confidence            999999999999887  899999999999999998642           134678999999999999999999999999 


Q ss_pred             eEEEEeCCH---HHHHHHHHHHcCc-------ccccccc---cccCCCCceEEEEcCCCCCCCCCCCCCC-CccccCCCC
Q 009464          409 RVVIANRTY---DRARELAETVGGH-------ALSLADL---ENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYA  474 (534)
Q Consensus       409 ~v~i~~R~~---~~a~~la~~~~~~-------~~~~~~~---~~~~~~~~divVn~t~~g~~~~~~~~~i-~~~~l~~~~  474 (534)
                      +|+|+||+.   ++++++++++...       ..++++.   .+ ....+|+||||||+||.|..+..|+ +..++.+..
T Consensus       152 ~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~-~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~  230 (289)
T PRK12548        152 EITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKA-EIASSDILVNATLVGMKPNDGETNIKDTSVFRKDL  230 (289)
T ss_pred             EEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHh-hhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCC
Confidence            599999997   7899988877421       1223222   22 2346799999999999987666676 556788889


Q ss_pred             EEEEEecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 009464          475 LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMA  532 (534)
Q Consensus       475 ~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~  532 (534)
                      +|+|++|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|++.+.
T Consensus       231 ~v~D~vY~P~~T~ll~~A~~~G~~~~~G~~ML~~Qa~~~f~lwtg~~~~~~~~~~~~~  288 (289)
T PRK12548        231 VVADTVYNPKKTKLLEDAEAAGCKTVGGLGMLLWQGAEAYKLYTGKDMPVEEVKELYF  288 (289)
T ss_pred             EEEEecCCCCCCHHHHHHHHCCCeeeCcHHHHHHHHHHHHHHhcCCCCCHHHHHHHhh
Confidence            9999999999999999999999999999999999999999999999999999998774

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=100.00  E-value=1.6e-65  Score=517.15  Aligned_cols=269  Identities=36%  Similarity=0.588  Sum_probs=241.3

Q ss_pred             cCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccC
Q 009464          252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  329 (534)
Q Consensus       252 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~  329 (534)
                      ++.+|++|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++..+|.|+|||||||+++++++|++|
T Consensus         1 ~~~~~~~~~viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~   80 (278)
T PRK00258          1 ITGKTRLYAVIGNPIAHSKSPLIHNAAFKQLGLDGVYLAILVPPEDLEDAVKGFFALGGRGANVTVPFKEAAFALADELS   80 (278)
T ss_pred             CCCceeEEEEECCchhcccCHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHHhCCCCEEEECcCCHHHHHHHhhcCC
Confidence            356789999999999999999999999999999999999999  589999999988899999999999999999999999


Q ss_pred             HHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-
Q 009464          330 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  408 (534)
Q Consensus       330 ~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-  408 (534)
                      +.|+.+||||||+++  +|+|+||||||.||+++|++.+          +.++++|+++|+|+||+||+++++|...|+ 
T Consensus        81 ~~A~~igavNtv~~~--~g~l~G~NTD~~G~~~~l~~~~----------~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~  148 (278)
T PRK00258         81 ERARLIGAVNTLVLE--DGRLIGDNTDGIGFVRALEERL----------GVDLKGKRILILGAGGAARAVILPLLDLGVA  148 (278)
T ss_pred             HHHHHhCCceEEEee--CCEEEEEcccHHHHHHHHHhcc----------CCCCCCCEEEEEcCcHHHHHHHHHHHHcCCC
Confidence            999999999999976  8999999999999999986422          235778999999999999999999999996 


Q ss_pred             eEEEEeCCHHHHHHHHHHHcCcc-ccc-ccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChh
Q 009464          409 RVVIANRTYDRARELAETVGGHA-LSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT  486 (534)
Q Consensus       409 ~v~i~~R~~~~a~~la~~~~~~~-~~~-~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T  486 (534)
                      +|+|+||+.++++++++.+.... ..+ .+..+ ....+|+||||||+||.+..+..|++.+.+++..+|+|++|+|..|
T Consensus       149 ~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~-~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T  227 (278)
T PRK00258        149 EITIVNRTVERAEELAKLFGALGKAELDLELQE-ELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPT  227 (278)
T ss_pred             EEEEEeCCHHHHHHHHHHhhhccceeecccchh-ccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCC
Confidence            99999999999999998875321 122 12223 3467899999999999876455577777888889999999999999


Q ss_pred             HHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       487 ~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +|+++|+++||++++|++||++||+.||++|||.++|.+.|++++++
T Consensus       228 ~ll~~A~~~G~~~~~G~~Ml~~Qa~~~f~~wtg~~~~~~~~~~~~~~  274 (278)
T PRK00258        228 PFLAWAKAQGARTIDGLGMLVHQAAEAFELWTGVRPPVEPMLAALRA  274 (278)
T ss_pred             HHHHHHHHCcCeecCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998876

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=100.00  E-value=8.6e-65  Score=506.96  Aligned_cols=262  Identities=28%  Similarity=0.423  Sum_probs=232.7

Q ss_pred             ccCCCccE-EEecCCCccccCCHHHHHHHHHHcCCCeEEEecccccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccC
Q 009464          251 QMGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  329 (534)
Q Consensus       251 ~~~~~t~~-~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~  329 (534)
                      +++++|++ |||||+|  ||+||.|||++|+++|+|++|.+++.++++++++.++..+|.|+|||||||++|++++|++|
T Consensus         4 ~~~~~~~~~~gliG~P--~~~Sp~ihn~~f~~~gl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~~~~~lD~l~   81 (272)
T PRK12550          4 MINKDTQLCISLAARP--SNFGTRFHNYLYEALGLNFLYKAFTTTDLTAAIGGVRALGIRGCAVSMPFKEAVIPLVDELD   81 (272)
T ss_pred             cCCCCceEEEEEEccc--hhcCHHHHHHHHHHcCCCcEEEecCHhHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhcCC
Confidence            46678885 9999999  77889999999999999999999998899999999998899999999999999999999999


Q ss_pred             HHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-
Q 009464          330 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  408 (534)
Q Consensus       330 ~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-  408 (534)
                      +.|+.+||||||+++  +|+|+||||||.||+++|+..           +.. .+++++|+||||+|||++++|.++|+ 
T Consensus        82 ~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-----------~~~-~~~~vlilGaGGaarAi~~aL~~~g~~  147 (272)
T PRK12550         82 PSAQAIESVNTIVNT--DGHLKAYNTDYIAIAKLLASY-----------QVP-PDLVVALRGSGGMAKAVAAALRDAGFT  147 (272)
T ss_pred             HHHHHhCCeeEEEee--CCEEEEEecCHHHHHHHHHhc-----------CCC-CCCeEEEECCcHHHHHHHHHHHHCCCC
Confidence            999999999999887  899999999999999998642           122 35789999999999999999999999 


Q ss_pred             eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC--CCCCCCccccCCCCEEEEEecCCChh
Q 009464          409 RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV--DETPIPKHALGHYALVFDAVYTPKIT  486 (534)
Q Consensus       409 ~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~--~~~~i~~~~l~~~~~v~Dv~y~p~~T  486 (534)
                      +|+|+||+.++++++++.+.....  +++   ....+|+||||||+||.+..  +..|++..++++..+|+|++|+|.+|
T Consensus       148 ~i~i~nR~~~~a~~la~~~~~~~~--~~~---~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T  222 (272)
T PRK12550        148 DGTIVARNEKTGKALAELYGYEWR--PDL---GGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAET  222 (272)
T ss_pred             EEEEEeCCHHHHHHHHHHhCCcch--hhc---ccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccC
Confidence            799999999999999988742211  111   12357999999999998643  23467777888889999999999999


Q ss_pred             HHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       487 ~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +|+++|+++||++++|++||++||+.||++|||+++|.+.|++.+.+
T Consensus       223 ~ll~~A~~~G~~~i~Gl~MLi~Qa~~~f~lwtg~~~~~~~~~~~~~~  269 (272)
T PRK12550        223 PLIRYARARGKTVITGAEVIALQAVEQFVLYTGVRPSDELIAEAAAF  269 (272)
T ss_pred             HHHHHHHHCcCeEeCCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999987753

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=100.00  E-value=3.2e-63  Score=500.50  Aligned_cols=263  Identities=29%  Similarity=0.423  Sum_probs=224.3

Q ss_pred             CccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccc---cHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHH
Q 009464          255 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD---DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV  331 (534)
Q Consensus       255 ~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~---~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~  331 (534)
                      .+++|||||+||+||+||.|||++|+++|+|+.|.++++.   ++.++++.++ .+|.|+|||||||+++++++|++|+.
T Consensus         4 ~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~~~~~l~~~~~~~~-~~~~G~nVT~P~K~~~~~~~d~~~~~   82 (282)
T TIGR01809         4 GPKKAFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFETCSAEELKEVLSGFG-PQFGGASVTIPLKFAILRFADEHTDR   82 (282)
T ss_pred             CCeEEEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeecCCHHHHHHHHHhcC-CCCcEEEECCCCHHHHHHHhhcCCHH
Confidence            3579999999999999999999999999999999999973   5788887774 49999999999999999999999999


Q ss_pred             HHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eE
Q 009464          332 AKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RV  410 (534)
Q Consensus       332 A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v  410 (534)
                      |+.+||||||++++ +|+|+||||||.||+.+|++. .        ...++++|+++|+|+||+||+++++|.++|+ +|
T Consensus        83 A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~l~~~-~--------~~~~~~~k~vlvlGaGGaarai~~aL~~~G~~~i  152 (282)
T TIGR01809        83 ASLIGSVNTLLRTQ-NGIWKGDNTDWDGIAGALANI-G--------KFEPLAGFRGLVIGAGGTSRAAVYALASLGVTDI  152 (282)
T ss_pred             HHHhCceeEEEEcC-CCcEEEecCCHHHHHHHHHhh-C--------CccccCCceEEEEcCcHHHHHHHHHHHHcCCCeE
Confidence            99999999999853 899999999999999998752 1        0014678999999999999999999999999 89


Q ss_pred             EEEeCCHHHHHHHHHHHcCc--cccc---ccccccCCCCceEEEEcCCCCCCCCCCCCCCCc-------cccCCCCEEEE
Q 009464          411 VIANRTYDRARELAETVGGH--ALSL---ADLENFNPEDGMILANTTSIGMQPKVDETPIPK-------HALGHYALVFD  478 (534)
Q Consensus       411 ~i~~R~~~~a~~la~~~~~~--~~~~---~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~-------~~l~~~~~v~D  478 (534)
                      +|+||+.+|++++++.++..  ...+   +++.. ....+|+||||||+||...  ...+..       ..+.+..+++|
T Consensus       153 ~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~-~~~~~DiVInaTp~g~~~~--~~~l~~~~~~~~~~~~~~~~~v~D  229 (282)
T TIGR01809       153 TVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLA-IEKAAEVLVSTVPADVPAD--YVDLFATVPFLLLKRKSSEGIFLD  229 (282)
T ss_pred             EEEeCCHHHHHHHHHHhhhcCcceeccchhhhhh-cccCCCEEEECCCCCCCCC--HHHhhhhhhhhccccCCCCcEEEE
Confidence            99999999999999987532  1112   22323 3457899999999998432  111110       12345689999


Q ss_pred             EecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 009464          479 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM  531 (534)
Q Consensus       479 v~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~  531 (534)
                      ++|+|.+|+|++.|+++||++++|++||++||+.||++|||.++|.+.|++.|
T Consensus       230 ~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~~~~~  282 (282)
T TIGR01809       230 AAYDPWPTPLVAIVSAAGWRVISGLQMLLHQGFAQFEQWTGMPAPREAMACAL  282 (282)
T ss_pred             EeeCCCCCHHHHHHHHCCCEEECcHHHHHHHHHHHHHHHHCCCChHHHHHhhC
Confidence            99999999999999999999999999999999999999999999999998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=100.00  E-value=9.7e-63  Score=495.18  Aligned_cols=264  Identities=36%  Similarity=0.566  Sum_probs=233.9

Q ss_pred             cEEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccc--cHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHHH
Q 009464          257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS  334 (534)
Q Consensus       257 ~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~  334 (534)
                      ++|||||+||+||+||.|||++|+++|+|++|.+++++  +++++++.++.++|+|+|||||||+++++++|++|+.|+.
T Consensus         1 ~~~~viG~pi~hS~SP~~hn~~~~~~g~~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~~~A~~   80 (270)
T TIGR00507         1 KLYGVIGNPIAHSKSPLIHNAFFKQLGLEGPYIAFLVPPDDLEDALSGFFALGFKGANVTSPFKEEAFQFLDEIDERAKL   80 (270)
T ss_pred             CEEEEECCccccccCHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhhCCHHHHH
Confidence            47999999999999999999999999999999999994  7999999999889999999999999999999999999999


Q ss_pred             hcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEe
Q 009464          335 IGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN  414 (534)
Q Consensus       335 iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~  414 (534)
                      +||||||+++  +|+|+||||||.||+++|++.           ....++|+++|+|+||+|++++++|++.|++|+++|
T Consensus        81 ~gavNti~~~--~g~l~g~NTD~~G~~~~l~~~-----------~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~  147 (270)
T TIGR00507        81 AGAVNTLKLE--DGKLVGYNTDGIGLVSDLERL-----------IPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIAN  147 (270)
T ss_pred             hCCceEEEee--CCEEEEEcCCHHHHHHHHHhc-----------CCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEe
Confidence            9999999976  899999999999999998652           123457899999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHcCcc-cccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHH
Q 009464          415 RTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE  493 (534)
Q Consensus       415 R~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~  493 (534)
                      |+.++++++++.+.... .......+.....+|+||||||.||.+..+..+++.+.+.+..+++|++|+|.+|+|+++|+
T Consensus       148 R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~  227 (270)
T TIGR00507       148 RTVSKAEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAK  227 (270)
T ss_pred             CCHHHHHHHHHHHhhcCceEEechhhhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHH
Confidence            99999999998875311 11111111123468999999999998765555666677888889999999999999999999


Q ss_pred             HCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          494 ESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       494 ~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      ++||++++|++||++||+.||++|||+++|.+.|++.+++
T Consensus       228 ~~G~~~vdG~~Ml~~Qa~~~f~~w~g~~~~~~~~~~~~~~  267 (270)
T TIGR00507       228 SLGTKTIDGLGMLVAQAALAFELWTGVEPDIEKMFEQLIA  267 (270)
T ss_pred             HCCCeeeCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999998875

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK02412 aroD 3-dehydroquinate dehydratase; Provisional

Probab=100.00  E-value=1.2e-53  Score=423.65  Aligned_cols=236  Identities=28%  Similarity=0.466  Sum_probs=210.1

Q ss_pred             cccccCCCCCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhh----HHHHHhhhC-CCcEEEEeccC
Q 009464           13 KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE----NIKTLIKES-PVPTLFTYRPI   87 (534)
Q Consensus        13 ~~~~~~~~~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~----~l~~l~~~~-~~PiI~T~R~~   87 (534)
                      |+.......+.|+|||||.+++.++++++++++...++|+||||+|+|.+.++.+    .+..+++.. ++|+|||+|++
T Consensus         5 ~~~~~~~~~~~~~i~v~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~~~~~~~~l~~~~~~~PiI~T~R~~   84 (253)
T PRK02412          5 TVKNLVIGEGAPKIIVPIMGKTLEEVLAEALAISKYDADIIEWRADFLEKISDVESVLAAAPAIREKFAGKPLLFTFRTA   84 (253)
T ss_pred             EEeceEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEEechhhccCCHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence            4556666778999999999999999999999877789999999999998754322    334455443 68999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhC-CcEEEEeccccchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHc
Q 009464           88 WEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQAS  165 (534)
Q Consensus        88 ~eGG~~~~~~~~~~~~l~~~~~~~-~~~iDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~  165 (534)
                      +|||.|+.++++|+++++.+++.+ |||||||+..+++.++++.. .++.++++|+|||||++||+.+++.+++++|.++
T Consensus        85 ~eGG~~~~~~~~~~~ll~~~~~~~~~d~vDiEl~~~~~~~~~l~~~~~~~~~kvI~S~H~f~~tP~~~~l~~~~~~~~~~  164 (253)
T PRK02412         85 KEGGEIALSDEEYLALIKAVIKSGLPDYIDVELFSGKDVVKEMVAFAHEHGVKVVLSYHDFEKTPPKEEIVERLRKMESL  164 (253)
T ss_pred             hhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeccCChHHHHHHHHHHHHcCCEEEEeeCCCCCCcCHHHHHHHHHHHHHh
Confidence            999999999999999999999999 99999999998887777764 3567899999999999999999999999999999


Q ss_pred             CCCEEEEEcccCCHHHHHHHHHHHhhcc--CCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHH
Q 009464          166 GADIVKFATTALDITDVARVFQITVHSQ--VSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL  243 (534)
Q Consensus       166 gaDi~Kia~~~~~~~D~~~l~~~~~~~~--~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l  243 (534)
                      ||||+|+|+||++..|++++++++.+..  ..+.|+|+|+||+.|++||+++++|||++||++++++  +||||++++++
T Consensus       165 gaDivKia~~a~~~~D~~~ll~~~~~~~~~~~~~P~i~~~MG~~G~~SRil~~~~GS~~ty~~~~~~--sAPGQ~~~~el  242 (253)
T PRK02412        165 GADIVKIAVMPQSEQDVLTLLNATREMKELYADQPLITMSMGKLGRISRLAGEVFGSSWTFASLDKA--SAPGQISVEDL  242 (253)
T ss_pred             CCCEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCchHHHcchhhhCCcceecCCCCC--CCCCCCCHHHH
Confidence            9999999999999999999999987752  2578999999999999999999999999999999864  99999999999


Q ss_pred             Hhhhhcc
Q 009464          244 LDLYNFR  250 (534)
Q Consensus       244 ~~~~~~~  250 (534)
                      +++++..
T Consensus       243 ~~i~~~l  249 (253)
T PRK02412        243 RRILEIL  249 (253)
T ss_pred             HHHHHHh
Confidence            9998764

>COG0710 AroD 3-dehydroquinate dehydratase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.9e-53  Score=404.38  Aligned_cols=225  Identities=32%  Similarity=0.522  Sum_probs=200.4

Q ss_pred             CeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCC-ChhhHHHHHhhhC-CCcEEEEeccCCCCCCCCCCHHHH
Q 009464           23 PTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNF-NPRENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENER  100 (534)
Q Consensus        23 ~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~-~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~  100 (534)
                      .|+||+|+.+.+.+++.++++.++..++|++|||+|+|... +..+....+++.. ..|+|||+|+.+|||.|++++++|
T Consensus         1 ~~~i~~~v~~~~~~~~~e~~~~~~~~~~Di~E~RvD~l~~~~~~~~~~~~~~e~~~~~~~IfT~R~~~EGG~~~~~~~~~   80 (231)
T COG0710           1 MPKIIVPVVGLDIAELKEQAEKSKELDADIVELRVDLLESNVEVLEVAKALREKDPDKPLIFTFRTVKEGGEFPGSEEEY   80 (231)
T ss_pred             CCEEEEEeecCCHHHHHHHHHHhhccCCCEEEEeechhcccchHHHHHHHHHHhccCCceEEEEeehhhcCCCCCCHHHH
Confidence            47999999999999999999999999999999999999932 2233445555543 679999999999999999999999


Q ss_pred             HHHHHHHHHhC-CcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCCH
Q 009464          101 VDVLRLAMELG-ADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDI  179 (534)
Q Consensus       101 ~~~l~~~~~~~-~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~~  179 (534)
                      ++++..+++.+ ++|||||+.++.+.++++...+ ...++|+|||||++||+++++.+++.+|.+.|+||+|||+||++.
T Consensus        81 i~ll~~la~~~~~d~iDiEl~~~~~~~~~~~~~~-~~~~vI~SyH~F~~TP~~~~i~~~l~km~~~~aDivKiAvm~~~~  159 (231)
T COG0710          81 IELLKKLAELNGPDYIDIELSSPEDDVKEIIKFA-KKHGVIVSYHDFEKTPPLEEIIERLDKMESLGADIVKIAVMPQSK  159 (231)
T ss_pred             HHHHHHHHhhcCCCEEEEEccCcchhHHHHHhcc-ccCCEEEEeccCCCCCcHHHHHHHHHHHHhhCCCeEEEEecCCCH
Confidence            99999999975 9999999999988777776532 233399999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhcc
Q 009464          180 TDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR  250 (534)
Q Consensus       180 ~D~~~l~~~~~~~~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~~  250 (534)
                      +|++++++++...+..+.|+|+||||..|++||+++++|||++||+++.+  ++||||++++++++++...
T Consensus       160 ~DvL~ll~~~~~~~~~~~p~i~i~MG~~G~~SRv~~~~~GS~~tya~~~~--~sAPGQi~v~~l~~~~~~l  228 (231)
T COG0710         160 EDVLDLLEATREFKEAEKPVITISMGKTGKISRVAGPVFGSPITYASLDK--PSAPGQISVDELRKILTLL  228 (231)
T ss_pred             HHHHHHHHHHHhccccCCCEEEEecCCCCchhhhhHhhhCCceeEeecCC--CCCCCCCCHHHHHHHHHHh
Confidence            99999999998754467999999999999999999999999999999987  4999999999999988653

>TIGR01093 aroD 3-dehydroquinate dehydratase, type I

Probab=100.00  E-value=2.7e-52  Score=408.82  Aligned_cols=220  Identities=37%  Similarity=0.606  Sum_probs=194.5

Q ss_pred             EEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhh-----CCCcEEEEeccCCCCCCCCCCHHH
Q 009464           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPVPTLFTYRPIWEGGQYDGDENE   99 (534)
Q Consensus        25 ~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~-----~~~PiI~T~R~~~eGG~~~~~~~~   99 (534)
                      +|||||++++.+++..+++.. ..|+|+||||+|+|.+.++.+.+..+.+.     .++|+|||+|+++|||.++.++++
T Consensus         1 ~i~v~~~~~~~~~~~~~~~~~-~~~aD~vElRlD~l~~~~~~~~~~~~~~~~~~~~~~~piI~T~R~~~eGG~~~~~~~~   79 (228)
T TIGR01093         1 KIFVPLTAPDLEEALATAEKI-CKGADIVELRVDLLKDPSSNNDVDALIEQLSQLRPDKPLIFTIRTISEGGKFPGNEEE   79 (228)
T ss_pred             CEEEEccCCCHHHHHHHHHHh-ccCCCEEEEEechhcccCcHHHHHHHHHHHHHhcCCCcEEEEECChhhCCCCCCCHHH
Confidence            589999999999999999986 78999999999999765432222222111     478999999999999999999999


Q ss_pred             HHHHHHHH-HHhCCcEEEEeccccchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccC
Q 009464          100 RVDVLRLA-MELGADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL  177 (534)
Q Consensus       100 ~~~~l~~~-~~~~~~~iDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~  177 (534)
                      |+++++.+ .+.++||||||++.+++..+++.. .+++++|+|+|||||++||+.+++.+++++|.++||||+|+|+||+
T Consensus        80 ~~~ll~~~~~~~~~d~vDiEl~~~~~~~~~l~~~~~~~~~kvI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~a~  159 (228)
T TIGR01093        80 YLEELKRAADSPGPDFVDIELFLPDDAVKELINIAKKGGTKIIMSYHDFQKTPSWEEIVERLEKALSYGADIVKIAVMAN  159 (228)
T ss_pred             HHHHHHHHHHhCCCCEEEEEccCCHHHHHHHHHHHHHCCCEEEEeccCCCCCCCHHHHHHHHHHHHHhCCCEEEEEeccC
Confidence            99999998 567799999999998888777764 3568999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhhcc-CCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhh
Q 009464          178 DITDVARVFQITVHSQ-VSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY  247 (534)
Q Consensus       178 ~~~D~~~l~~~~~~~~-~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~  247 (534)
                      +.+|+++|++++.+.+ ..++|+|+|+||+.|++||+++++|||++||+++++  ++||||+++++|+++|
T Consensus       160 ~~~D~~~ll~~~~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~~t~~~~~~--~sApGQ~~~~~l~~~~  228 (228)
T TIGR01093       160 SKEDVLTLLEITNKVDEHADVPLITMSMGDRGKISRVLGAVFGSVLTFGSLGK--ASAPGQISVDDLRELL  228 (228)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChhHhhccccccccceeccCCC--CCCCCCcCHHHHHhhC
Confidence            9999999999987762 356899999999999999999999999999999976  4999999999999864

Type II 3-dehydroquinate dehydratase, designated AroQ, is described by TIGR01088.

>PF01487 DHquinase_I: Type I 3-dehydroquinase; InterPro: IPR001381 3-dehydroquinate dehydratase (4

Probab=100.00  E-value=1.3e-51  Score=403.53  Aligned_cols=220  Identities=39%  Similarity=0.635  Sum_probs=186.6

Q ss_pred             EEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCh---hhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHH
Q 009464           27 CVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDV  103 (534)
Q Consensus        27 cv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~  103 (534)
                      ||||+++|.++++++++++...|+|+||||+|+|.+.+.   .+.+..+++..++|+|||+|+++|||.+..++++|+++
T Consensus         1 cv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~~~~l~~lr~~~~~piI~T~R~~~eGG~~~~~~~~~~~l   80 (224)
T PF01487_consen    1 CVPLTGSTLEELLAELEEAESSGADAVELRLDYLENDSAEDISEQLAELRRSLDLPIIFTVRTKEEGGRFQGSEEEYLEL   80 (224)
T ss_dssp             EEEE--SSHHHHHHHHHHHHHTTTSEEEEEGGGSTTTSHHHHHHHHHHHHHHCTSEEEEE--BGGGTSSBSS-HHHHHHH
T ss_pred             CEeeCCCCHHHHHHHHHHHHhcCCCEEEEEeccccccChHHHHHHHHHHHHhCCCCEEEEecccccCCCCcCCHHHHHHH
Confidence            999999999999999999876699999999999995332   35677788888999999999999999999999999999


Q ss_pred             HHHHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCCHHHHH
Q 009464          104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVA  183 (534)
Q Consensus       104 l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~~~D~~  183 (534)
                      ++.+++.|++|||||++..++........+.++++||+|||||++||+++++.+++++|.++||||+|+|+|+++.+|++
T Consensus        81 l~~~~~~~~d~iDiE~~~~~~~~~~~~~~~~~~~~iI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D~~  160 (224)
T PF01487_consen   81 LERAIRLGPDYIDIELDLFPDDLKSRLAARKGGTKIILSYHDFEKTPSWEELIELLEEMQELGADIVKIAVMANSPEDVL  160 (224)
T ss_dssp             HHHHHHHTSSEEEEEGGCCHHHHHHHHHHHHTTSEEEEEEEESS---THHHHHHHHHHHHHTT-SEEEEEEE-SSHHHHH
T ss_pred             HHHHHHcCCCEEEEEcccchhHHHHHHHHhhCCCeEEEEeccCCCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCHHHHH
Confidence            99999999999999999655443333333468999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcc-CCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhh
Q 009464          184 RVFQITVHSQ-VSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN  248 (534)
Q Consensus       184 ~l~~~~~~~~-~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~  248 (534)
                      +|++++.+.. .++.|+|+|+||+.|++||+++++|||++||+..++  ++||||+++++++++|+
T Consensus       161 ~l~~~~~~~~~~~~~p~i~~~MG~~G~~SRi~~~~~Gs~~t~~~~~~--~sApGQl~~~~l~~~~~  224 (224)
T PF01487_consen  161 RLLRFTKEFREEPDIPVIAISMGELGRISRILNPIFGSVLTFASAGE--ASAPGQLTLEELREILH  224 (224)
T ss_dssp             HHHHHHHHHHHHTSSEEEEEEETGGGHHHHHCHHHHTBSEEEEBSSS---SSTT-EBHHHHHHHHH
T ss_pred             HHHHHHHHHhhccCCcEEEEEcCCCchhHHHHHhhhcCCcccCCCCC--CCCCCCCcHHHHHHHhC
Confidence            9999998863 257999999999999999999999999999997765  59999999999999874

2.1.10 from EC), or dehydroquinase, catalyzes the conversion of 3-dehydroquinate into 3-dehydroshikimate. It is the third step in the shikimate pathway for the biosynthesis of aromatic amino acids from chorismate. Two classes of dehydroquinases exist, known as types I and II. The best studied type I enzyme is from Escherichia coli (gene aroD) and related bacteria where it is a homodimeric protein. In fungi, dehydroquinase is part of a multifunctional enzyme which catalyzes five consecutive steps in the shikimate pathway. A histidine [] is involved in the catalytic mechanism.; GO: 0003855 3-dehydroquinate dehydratase activity; PDB: 2O7Q_A 2GPT_A 2O7S_A 1SFL_A 2OCZ_A 2OX1_C 1GQN_A 1QFE_B 1L9W_D 3L9C_A ....

>PRK13575 3-dehydroquinate dehydratase; Provisional

Probab=100.00  E-value=2.8e-50  Score=394.22  Aligned_cols=222  Identities=23%  Similarity=0.380  Sum_probs=184.8

Q ss_pred             eEEEEeccCCC-HHHH-HHHHHhhhhcCCCEEEEEecCCCCCChhhHHH----HHhhh-CCCcEEEEeccCCCCCCCCCC
Q 009464           24 TLICVPIMGES-VDKM-VVDMGKANASGADLVEIRLDGLKNFNPRENIK----TLIKE-SPVPTLFTYRPIWEGGQYDGD   96 (534)
Q Consensus        24 ~~icv~l~~~~-~~~~-~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~----~l~~~-~~~PiI~T~R~~~eGG~~~~~   96 (534)
                      +.|++++.... .++. ..+++.+ ..+||+||||+|+|.+.+.. .+.    .+++. .++|+|||+|+++|||.++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vElRlD~l~~~~~~-~~~~~i~~l~~~~~~~p~I~T~Rt~~EGG~~~~~   81 (238)
T PRK13575          4 VEVAATIAPQLSIEETLIQKINHR-IDAIDIIELRIDQWENVTVD-QLAEMITKLKVLQDSFKLLVTYRTKLQGGYGQFT   81 (238)
T ss_pred             eeEeeeeccccccchhHHHHHHhc-CCCCCEEEEEeccccCCCHH-HHHHHHHHHHhhcCCCCEEEEeCChhhCCCCCCC
Confidence            45667776664 5555 4444432 46899999999999875432 333    33332 478999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC-CcEEEEeccc--cchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 009464           97 ENERVDVLRLAMELG-ADYIDVELQV--AREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (534)
Q Consensus        97 ~~~~~~~l~~~~~~~-~~~iDiEl~~--~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Ki  172 (534)
                      +++|+++++.++..+ +||||||++.  ..+..+++.. .++.++++|+|||||++||+.+++.+++++|.++||||+||
T Consensus        82 ~~~~~~ll~~~~~~~~~d~vDiE~~~~~~~~~~~~l~~~~~~~~~~vI~S~H~F~~TP~~~~l~~~~~~m~~~gaDi~Ki  161 (238)
T PRK13575         82 NDLYLNLLSDLANINGIDMIDIEWQADIDIEKHQRLITHLQQYNKEVVISHHNFESTPPLDELKFIFFKMQKFNPEYVKL  161 (238)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEcccCCChHHHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHHHHHHHhCCCEEEE
Confidence            999999998888765 8999999986  3344455543 35678999999999999999999999999999999999999


Q ss_pred             EcccCCHHHHHHHHHHHhhcc-CCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhc
Q 009464          173 ATTALDITDVARVFQITVHSQ-VSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF  249 (534)
Q Consensus       173 a~~~~~~~D~~~l~~~~~~~~-~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~  249 (534)
                      |+||++.+|+++|++++.++. ..+.|+|+|+||+.|++||+++++|||++||++++++  +||||++++++++++.+
T Consensus       162 Av~~~~~~Dvl~Ll~~~~~~~~~~~~p~i~i~MG~~G~iSRi~~~~~GS~~Tya~l~~~--sAPGQi~v~~l~~i~~~  237 (238)
T PRK13575        162 AVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALSYGCIGEP--QAPGQIHVTDLKAQVTL  237 (238)
T ss_pred             EecCCCHHHHHHHHHHHHHHHhccCCCEEEEeCCCCCchhhcchhhhCCceEecCCCCC--CCCCCCCHHHHHHHHHh
Confidence            999999999999999987653 2468999999999999999999999999999999864  99999999999998754

>cd00502 DHQase_I Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase

Probab=100.00  E-value=4.3e-50  Score=392.79  Aligned_cols=218  Identities=36%  Similarity=0.598  Sum_probs=193.8

Q ss_pred             EEEEeccCC-CHHHHHHHHHhhhhcCCCEEEEEecCCCCCC---hhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHH
Q 009464           25 LICVPIMGE-SVDKMVVDMGKANASGADLVEIRLDGLKNFN---PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENER  100 (534)
Q Consensus        25 ~icv~l~~~-~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~---~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~  100 (534)
                      +||+||.++ +.++....++...  |+|+||||+|+|.+..   ..++++.+++..+.|+|||+|+++|||.+..++++|
T Consensus         1 ~i~~~i~~~~~~~e~~~~~~~~~--~aD~vElR~D~~~~~~~~~~~~~~~~lr~~~~~piI~T~R~~~eGG~~~~~~~~~   78 (225)
T cd00502           1 KICVPLTGPDLLEEALSLLELLL--GADAVELRVDLLEDPSIDDVAEQLSLLRELTPLPIIFTVRTKSEGGNFEGSEEEY   78 (225)
T ss_pred             CEEEEecCCCCHHHHHHHHHHhc--CCCEEEEEEeeccccchHHHHHHHHHHHHhCCCCEEEEEcccccCCCcCCCHHHH
Confidence            589999999 9999888776542  8999999999998752   345677777767799999999999999999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeccccchhhHHhh-ccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCCH
Q 009464          101 VDVLRLAMELGADYIDVELQVAREFNDSIR-GKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDI  179 (534)
Q Consensus       101 ~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~~  179 (534)
                      +++++.+++.|++|||||++. + ..+++. ..+++++|+|+|||+|++||+.+++.+++++|..+||||+|+|+||++.
T Consensus        79 ~~ll~~~~~~~~d~vDiEl~~-~-~~~~~~~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKla~~~~~~  156 (225)
T cd00502          79 LELLEEALKLGPDYVDIELDS-A-LLEELINSRKKGNTKIIGSYHDFSGTPSDEELVSRLEKMAALGADIVKIAVMANSI  156 (225)
T ss_pred             HHHHHHHHHHCCCEEEEEecc-h-HHHHHHHHHHhCCCEEEEEeccCCCCcCHHHHHHHHHHHHHhCCCEEEEEecCCCH
Confidence            999999999999999999987 3 333443 3346899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcc-CCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhh
Q 009464          180 TDVARVFQITVHSQ-VSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN  248 (534)
Q Consensus       180 ~D~~~l~~~~~~~~-~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~  248 (534)
                      +|++++++++.+.. ..+.|+|+|+||+.|++||++++.|||++||+++++  ++||||+++++++++|.
T Consensus       157 ~D~~~ll~~~~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~~t~~~~~~--~sApGQ~~~~~l~~~~~  224 (225)
T cd00502         157 EDNLRLLKFTRQVKNLYDIPLIAINMGELGKLSRILSPVFGSPLTYASLPE--PSAPGQLSVEELKQALS  224 (225)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEEEEEcCCCCchhhccccccCCcccccCCCC--CCCCCCcCHHHHHHHHh
Confidence            99999999988763 236799999999999999999999999999999986  49999999999998875

) Catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate to produce dehydroshikimate. Dehydroquinase is the third enzyme in the shikimate pathway, which is involved in the biosynthesis of aromatic amino acids. Type I DHQase exists as a homodimer. Type II 3-dehydroquinase also catalyzes the same overall reaction, but is unrelated in terms of sequence and structure, and utilizes a completely different reaction mechanism.

>PRK13576 3-dehydroquinate dehydratase; Provisional

Probab=100.00  E-value=1.3e-48  Score=375.37  Aligned_cols=204  Identities=23%  Similarity=0.292  Sum_probs=173.1

Q ss_pred             CCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHH
Q 009464           22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERV  101 (534)
Q Consensus        22 ~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~  101 (534)
                      +.|+||+||++++.++++.+.+.   .++|+||||+|+|.+.+..  +..++++...|+|||+|+++|||.+.+++++|+
T Consensus         1 ~~p~i~vpi~~~~~e~i~~~~~~---~~aD~vE~RlD~l~~~~~~--~~~~l~~~~~plI~T~R~~~EGG~~~~~~~~r~   75 (216)
T PRK13576          1 MRPLIVASLPIKKIEDLKLIGNF---LDADLIELRLDYLKDREVS--VIEFLDKYKDKLIVTLRDKAEGGINELDDELKI   75 (216)
T ss_pred             CCCEEEEEeCCCCHHHHHHHHhc---CCCCEEEEEeccccccchh--HHHHHHhcCCCEEEEeCChHHCCCCcCCHHHHH
Confidence            46899999999999999987553   5899999999999875433  233334456799999999999999999999999


Q ss_pred             HHHHHHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCCH-H
Q 009464          102 DVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDI-T  180 (534)
Q Consensus       102 ~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~~-~  180 (534)
                      ++++.+++.++ ++|||++...+..       ..+.++|+|||||++||+.++|.+++++|.+ ||||+|||+||++. .
T Consensus        76 ~ll~~~~~~~~-~vDiE~~~a~~~~-------~~~~~vI~S~HdF~~TP~~~eL~~~l~~m~~-gaDI~KiA~mp~~~~~  146 (216)
T PRK13576         76 SLLKELYDKQF-LYDVEASFLQKYN-------VPYDNKIVSIHYFDYLPTSEEVKEIVSKFYE-KAFSVKIAVLGLKGYK  146 (216)
T ss_pred             HHHHHHHHhCC-eEEEEcchhhhcC-------CCCCeEEEEECCCCCCcCHHHHHHHHHHHHh-cCCEEEEEeCCCCchH
Confidence            99999999985 7799998544321       1245799999999999999999999999987 99999999999986 7


Q ss_pred             HHH-HHHHHHhhccCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhcc
Q 009464          181 DVA-RVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR  250 (534)
Q Consensus       181 D~~-~l~~~~~~~~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~~  250 (534)
                      |++ +|+.   .     ..+|+|+||+.| +||+++++|||++||++++++  +||||+++++|+++|+..
T Consensus       147 d~l~~Ll~---~-----~~~i~~~MG~~G-iSRi~~~~fGS~lTy~~~~~~--sAPGQi~v~~l~~i~~~l  206 (216)
T PRK13576        147 EVLLPLLE---Y-----ENVTVMPMSVNP-LERIAFSLLGSKLIYSYAIEP--TAQGQLHYKKVKQILNYL  206 (216)
T ss_pred             hHHHHHhc---c-----cCccEEEcCCcc-HHHHHHHHhCCeeEEEecCCC--CCCCCccHHHHHHHHHHH
Confidence            765 5543   1     235889999999 999999999999999999864  999999999999999764

>PRK01261 aroD 3-dehydroquinate dehydratase; Provisional

Probab=100.00  E-value=4.4e-45  Score=354.23  Aligned_cols=217  Identities=20%  Similarity=0.290  Sum_probs=179.7

Q ss_pred             ccccc--cccCCCCCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh--hHHHHHhhhCCCcEEEEec
Q 009464           10 SGSKL--VSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR--ENIKTLIKESPVPTLFTYR   85 (534)
Q Consensus        10 ~~~~~--~~~~~~~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~--~~l~~l~~~~~~PiI~T~R   85 (534)
                      ||-|+  ..-..-...|+||+||++++.++++.+++.+...++|+||||+|+|.+.+..  ..+...++..++|+|||+|
T Consensus         5 ~~~~~~v~~~~~g~~~p~Icvpi~~~~~ee~~~~~~~~~~~~aDivE~RlD~l~~~~~~~~~~~~~~l~~~~~p~I~T~R   84 (229)
T PRK01261          5 SGDKISIGKFVIGNMQPIVVESIFFKDIKEMKERFKTKVLSDKNLYEIRFDLFHDHSIESEPEIISALNEMDIDYIFTYR   84 (229)
T ss_pred             cCCeEEEeCeEeCCCCcEEEEEeCCCCHHHHHHHHHHhhcCCCCEEEEEeeccCCCChHHHHHHHHHHhhcCCCEEEEEc
Confidence            56554  5777788899999999999999999999888778999999999999875432  1222233344899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHc
Q 009464           86 PIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQAS  165 (534)
Q Consensus        86 ~~~eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~  165 (534)
                      +.        ++   .++++.+++.++||||||++...++     ..+..++++|+|||    ||+.++|.+++++|.++
T Consensus        85 ~~--------~~---~~~l~~a~~~~~d~vDIEl~~~~~~-----~~~~~~~kvIvS~H----tp~~eeL~~~l~~m~~~  144 (229)
T PRK01261         85 GV--------DA---RKYYETAIDKMPPAVDLDINLIGKL-----EFRPRNTMLMVSYH----TNNSDNMPAILDIMNEK  144 (229)
T ss_pred             CC--------CH---HHHHHHHHhhCCCEEEEEcccchhh-----hhhcCCCeEEEEeC----CCCHHHHHHHHHHHHHh
Confidence            52        22   4788888887799999999873332     22357899999999    78889999999999999


Q ss_pred             CCCEEEEEcccCCHHHHHHHHHHHhhc-cCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHH
Q 009464          166 GADIVKFATTALDITDVARVFQITVHS-QVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLL  244 (534)
Q Consensus       166 gaDi~Kia~~~~~~~D~~~l~~~~~~~-~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~  244 (534)
                      ||||+|+|+||++.+|+++++..+.+. ...+.|+|+|+||+  ++||+++++|||++||+++++  ++||||+++++|+
T Consensus       145 gaDI~KiAvmp~~~~Dvl~~l~~~~~~~~~~~~p~i~isMG~--~iSRi~~~~fGS~lTyas~~~--~sAPGQi~v~~l~  220 (229)
T PRK01261        145 NPDYVKVACNYNDNKKFVDDLQYILMKKDEKYKPIVFIPMGR--EFLRIFSGYYVSDIVYARYDN--ETAPGQPKRDYYE  220 (229)
T ss_pred             CCCEEEEEeCCCChHHHHHHHHHHHHHHhcCCCCEEEEECCc--HHHHHHHHHHCCceEEeeCCC--CCCCCCCCHHHHH
Confidence            999999999999999998877644443 33568999999999  999999999999999999986  4999999999999


Q ss_pred             hhhhcc
Q 009464          245 DLYNFR  250 (534)
Q Consensus       245 ~~~~~~  250 (534)
                      ++++..
T Consensus       221 ~~~~~~  226 (229)
T PRK01261        221 SAFIKY  226 (229)
T ss_pred             HHHHHh
Confidence            998753

>KOG0692 consensus Pentafunctional AROM protein [Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-38  Score=323.87  Aligned_cols=492  Identities=18%  Similarity=0.115  Sum_probs=379.9

Q ss_pred             CCCCCeEEEEeccCCCHHHHHHHHH----hhhhcCCCEEEEEecCCCCCC-hhhHHHHHhhhCCCcEEEEeccCCCCCC-
Q 009464           19 MRKNPTLICVPIMGESVDKMVVDMG----KANASGADLVEIRLDGLKNFN-PRENIKTLIKESPVPTLFTYRPIWEGGQ-   92 (534)
Q Consensus        19 ~~~~~~~icv~l~~~~~~~~~~~~~----~~~~~~~D~vElRlD~l~~~~-~~~~l~~l~~~~~~PiI~T~R~~~eGG~-   92 (534)
                      +-+.+..||    .++..+++..+.    ++.+.+++++|.|.|-...++ +-+..........+|.+++.|..||||. 
T Consensus        90 aeKas~iV~----~pdir~i~~~i~~pgSKs~snralllaa~~eg~~~~~n~L~sddt~~m~sal~~L~~~~~~we~~~~  165 (595)
T KOG0692|consen   90 AEKASEIVL----QPDIREISGLIKLPGSKSLSNRALLLAALSEGTTVVDNLLNSDDTNYMLSALKTLGLNVETWEENNR  165 (595)
T ss_pred             hhhcchhhc----ChhHHHhhceeeCCCCchhhhhHHHHHHHhccceeccccccccchhhhhhhHHHhccccceecCCCE
Confidence            334444555    444555443221    234456666666666655443 1111112223357899999999999998 


Q ss_pred             --CCCCHHHHHHHHHHHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEE
Q 009464           93 --YDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIV  170 (534)
Q Consensus        93 --~~~~~~~~~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~  170 (534)
                        ..+...++...++..++++.+|+|.|++...++...+-....+..++|.+.|+.+.+|    +-.+....++.||||.
T Consensus       166 ~vveG~gg~~~~~~~~~~eLylgnagta~r~lt~~aa~v~~k~~~k~~Vl~g~hrmq~rP----i~~LV~~l~q~GadI~  241 (595)
T KOG0692|consen  166 AVVEGCGGEFSIDSKSDIELYLGNAGTAMRPLTEFAAAVTAKGGNKSYVLDGVHRMQERP----IGDLVVGLKQLGADIE  241 (595)
T ss_pred             EEEEcCCCeeeechhhhhhhccCccchhhhhHHHHHHHhhcCCCCceEEEecCcccccCC----chHHHHHHHhcCCceE
Confidence              6777666655677778889999999999888887776655555669999999999999    6677788888999999


Q ss_pred             EEEcccCCHHHHHHHHHHHhhccCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhh--h
Q 009464          171 KFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY--N  248 (534)
Q Consensus       171 Kia~~~~~~~D~~~l~~~~~~~~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~--~  248 (534)
                      |++.+...+-|+. ....+   +...+|+++.-||+.+..+|+++|.|+.++||..++..+-|+|+|.....|.+.|  +
T Consensus       242 ~~~~t~~~p~dv~-~~~~~---~gg~v~l~g~Vssqy~~~~lm~ap~a~g~vt~~~vdgk~iS~pyv~mt~~lme~fgvn  317 (595)
T KOG0692|consen  242 CTLGTNCPPVDVN-ANGGL---PGGKVKLSGSVSSQYLTALLMCAPLALGDVTIEIVDGKLISVPYVEMTLKLMERFGVN  317 (595)
T ss_pred             EeccCCCCceeee-ccCCC---cCceeeeeeeehhhHHHHHHHhhhhcCCceEEEeecCccccccchhHHHHHHHHhCcC
Confidence            9999999999995 22222   3345899999999999999999999999999999997778999999999999999  7


Q ss_pred             ccccCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccccHHHHHHHhcCCCCCEEE-eccchHHHHhhcccc
Q 009464          249 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS-CTIPHKEAAVKCCDE  327 (534)
Q Consensus       249 ~~~~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~-VT~P~K~~v~~~ld~  327 (534)
                      +....+.++.|++.|.|.+|+.+|.+||.+|.+--.++.|...-++..-.++......++.||+ |+.|||.++...+++
T Consensus       318 ~~~s~~~~~~y~i~g~~y~~p~~~~ve~dAssa~yfla~aa~tg~~~tV~~~g~~Slqgda~Fa~vl~pmgc~v~qt~~s  397 (595)
T KOG0692|consen  318 VEHSTSWDRFYVIGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDAKFAEVLEPMGCKVSQTENS  397 (595)
T ss_pred             eEecCCCcceEeccCcccCCCCCceeecccccccccceeeeEecceeeeccccceecccccchHhhhccccceeeeeccc
Confidence            7888899999999999999999999999999999999999988776555555544556899999 999999999999999


Q ss_pred             cCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCc--ccccCCcEEEEEcCchhHHHHHHHHHH
Q 009464          328 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV--SSALAGKLFVVIGAGGAGKALAYGAKA  405 (534)
Q Consensus       328 ~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~--~~~l~~k~vlVlGaGG~graia~~L~~  405 (534)
                      ++..+.-+||+|++.++..|+...++|||..+-+-++...++...+.....  ....-.+...|+|.++.++...+...+
T Consensus       398 vtv~gp~~ga~~~~~lr~iD~m~~m~d~~~t~svvA~~~~~~s~gdptti~~~as~rvket~r~ia~~~el~klg~~~~E  477 (595)
T KOG0692|consen  398 VTVTGPPRGAFGMRHLRAIDVMNKMPDVAMTLSVVALFAGLRSSGDPTTIRDVASWRVKETERMIAICTELRKLGATVEE  477 (595)
T ss_pred             ccccCCCCCcccceehhhhcccccccchhHhHhHHHHhhcccCCCCCcccccccchhHHHHHHHHHHHHHHHHhcccccc
Confidence            999999999999999774478999999999999999987665422211100  011223567788999999999988888


Q ss_pred             CCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCCh
Q 009464          406 KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI  485 (534)
Q Consensus       406 ~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~  485 (534)
                      .+..++|.+|+ +|.-++++..+    .+....+.....+.++-++++.+  +...+.+.....|+.+-.|+|-+|+|+-
T Consensus       478 ~~dg~~v~~~~-~k~lk~ae~~g----~~TydDhr~am~fsvLA~~~~~~--~~i~d~~ct~kt~p~y~~Vl~~~~~~kl  550 (595)
T KOG0692|consen  478 GSDGYCVITPP-EKKLKLAEIDG----SLTYDDHRMAMAFSVLAACADVP--ITINDPGCTRKTFPDYFQVLERITKHKL  550 (595)
T ss_pred             cCceEEEeCCc-hHhccchhhcc----ccccccccchhhhhHHHhccCCC--ccccCCCccccccchHHHHHHHHhhccc
Confidence            88899999999 77777776642    12222221234466777777765  4455666677777777789999999998


Q ss_pred             hHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          486 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       486 T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      |.+  ++.+.|....  .+|++-|+.+||+.++|+++|.+.-.+++-.
T Consensus       551 tga--eple~~a~kn--ssm~vigmr~agkttigk~~akeL~~kimdl  594 (595)
T KOG0692|consen  551 TGA--EPLESGAIKN--SSMFVIGMREAGKTTIGKPAAKELYWKIMDL  594 (595)
T ss_pred             ccc--Chhhcccccc--ceeeeehhhhcCceecCccchHHhCeeeecc
Confidence            877  7777775433  9999999999999999999999987776543

>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []

Probab=99.94  E-value=8.4e-28  Score=197.91  Aligned_cols=81  Identities=41%  Similarity=0.806  Sum_probs=75.1

Q ss_pred             ecCCCccccCCHHHHHHHHHHcCCCeEEEecccc--cHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHHHhcCe
Q 009464          261 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAV  338 (534)
Q Consensus       261 liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAv  338 (534)
                      |||+||+||+||.|||++|+++|+|+.|.+++++  +++++++.++..+|+|+|||||||+++++++|++|+.|+.+|||
T Consensus         1 viG~pi~hS~SP~~hn~~f~~~g~~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~~VT~P~K~~~~~~~D~~~~~A~~igAv   80 (83)
T PF08501_consen    1 VIGNPISHSLSPLIHNAAFEALGLDAVYIPFEVEPEDLEDFLDALRAPNFRGLNVTMPHKEAAIPYLDELSPSAKAIGAV   80 (83)
T ss_dssp             EEESSSTT-SHHHHHHHHHHHTTSSEEEEEEETSTTCHHHHHHHHHHTTESEEEE-TTSTTHHGGGSSEE-HHHHHHTS-
T ss_pred             CcCCCcccccCHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHhcCCCCeeeecchHHHHHHHHhccCCHHHHHhCCc
Confidence            6899999999999999999999999999999996  99999999998999999999999999999999999999999999


Q ss_pred             eEE
Q 009464          339 NCI  341 (534)
Q Consensus       339 NTi  341 (534)
                      |||
T Consensus        81 Ntv   83 (83)
T PF08501_consen   81 NTV   83 (83)
T ss_dssp             SEE
T ss_pred             ccC
Confidence            997

Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=99.90  E-value=5.7e-23  Score=206.40  Aligned_cols=184  Identities=24%  Similarity=0.390  Sum_probs=151.5

Q ss_pred             EEecCCCccccCCHHHHHHHHHHcCCCeEEEec--cc--ccHHHHHHHhcCC-CCCEEEeccchHHHHhh--cccccCHH
Q 009464          259 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHL--LV--DDIAKFFQTYSSN-DFAGFSCTIPHKEAAVK--CCDEVDTV  331 (534)
Q Consensus       259 ~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~--~~--~~~~~~~~~~~~~-~~~G~~VT~P~K~~v~~--~ld~~~~~  331 (534)
                      .-++|+.=+.-.-=.+|+++|+++|++..|.+|  ++  +++.++++.++.. ++.|++||+|||+.+.+  ++|++ +.
T Consensus        38 ~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I-~~  116 (283)
T PRK14192         38 TILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDERACFDAI-SL  116 (283)
T ss_pred             EEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCccccCHHHHHhcc-CH
Confidence            345564333223346999999999999999999  55  3688888888654 89999999999999999  99999 88


Q ss_pred             HHHhcCeeEEEEeccCCe------EEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHHHHHHHH
Q 009464          332 AKSIGAVNCIIRRQSDGK------LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAK  404 (534)
Q Consensus       332 A~~iGAvNTi~~~~~~g~------l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~graia~~L~  404 (534)
                      ++.++++||+ +   .|+      ++|+||| .||++.|+..           +.+++||+++|+|+|| +||+++..|.
T Consensus       117 aKDVdg~n~~-n---~G~l~~~~~~~~p~T~-~gii~~L~~~-----------~i~l~Gk~vvViG~gg~vGkpia~~L~  180 (283)
T PRK14192        117 AKDVDGVTCL-G---FGRMAMGEAAYGSATP-AGIMRLLKAY-----------NIELAGKHAVVVGRSAILGKPMAMMLL  180 (283)
T ss_pred             HHhcCCCCcc-c---cCccccCCCcccCCcH-HHHHHHHHHc-----------CCCCCCCEEEEECCcHHHHHHHHHHHH
Confidence            9999999999 3   567      8999999 9999998752           3578999999999999 9999999999


Q ss_pred             HCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC
Q 009464          405 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK  484 (534)
Q Consensus       405 ~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~  484 (534)
                      +.|++|++++|.   ++.+++.+               ..+|+||||||   .|.    +++.++++++.+|+|+.|+|.
T Consensus       181 ~~gatVtv~~~~---t~~L~~~~---------------~~aDIvI~AtG---~~~----~v~~~~lk~gavViDvg~n~~  235 (283)
T PRK14192        181 NANATVTICHSR---TQNLPELV---------------KQADIIVGAVG---KPE----LIKKDWIKQGAVVVDAGFHPR  235 (283)
T ss_pred             hCCCEEEEEeCC---chhHHHHh---------------ccCCEEEEccC---CCC----cCCHHHcCCCCEEEEEEEeec
Confidence            999999999983   34444332               35899999996   222    577888999999999999984

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=99.88  E-value=8.1e-22  Score=181.39  Aligned_cols=152  Identities=42%  Similarity=0.676  Sum_probs=125.1

Q ss_pred             ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHcCcc--
Q 009464          355 TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA--  431 (534)
Q Consensus       355 TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~~~~~--  431 (534)
                      |||.||.++++..           +.++++++++|+|+|++|++++..|.+.| .+|++++|+.++++++++.++...  
T Consensus         1 td~~g~~~a~~~~-----------~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~   69 (155)
T cd01065           1 TDGLGFVRALEEA-----------GIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIA   69 (155)
T ss_pred             CCHHHHHHHHHhh-----------CCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccc
Confidence            8999999998752           13467899999999999999999999997 589999999999999988876421  


Q ss_pred             cccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHHHHHH
Q 009464          432 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAY  511 (534)
Q Consensus       432 ~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~  511 (534)
                      ....+..+ ...++|+||+|+|.+..+ ....++....++++.+++|++|.|..|++.+.++++|+.+++|++||++|+.
T Consensus        70 ~~~~~~~~-~~~~~Dvvi~~~~~~~~~-~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~~~q~~  147 (155)
T cd01065          70 IAYLDLEE-LLAEADLIINTTPVGMKP-GDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEMLVYQAA  147 (155)
T ss_pred             eeecchhh-ccccCCEEEeCcCCCCCC-CCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHHHHHHH
Confidence            12233333 356789999999987642 1233444455678899999999999999999999999999999999999999


Q ss_pred             HHHHHhcC
Q 009464          512 EQYERFTG  519 (534)
Q Consensus       512 ~qf~lwtg  519 (534)
                      .||++|||
T Consensus       148 ~~~~~~~~  155 (155)
T cd01065         148 EAFELWTG  155 (155)
T ss_pred             HHHHHhcC
Confidence            99999997

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=99.51  E-value=2.8e-14  Score=128.55  Aligned_cols=97  Identities=43%  Similarity=0.604  Sum_probs=77.8

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc---ccccccccccCCCCceEEEEcCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~---~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      .++++++++|+||||+||+++++|.+.|+ +|+|+|||.+|++++++.++..   ..+++++.+ ...++|+||||||++
T Consensus         8 ~~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~-~~~~~DivI~aT~~~   86 (135)
T PF01488_consen    8 GDLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEE-ALQEADIVINATPSG   86 (135)
T ss_dssp             STGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCH-HHHTESEEEE-SSTT
T ss_pred             CCcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHH-HHhhCCeEEEecCCC
Confidence            46889999999999999999999999999 6999999999999999999433   456666664 456799999999999


Q ss_pred             CCCCCCCCCCCccccCCC----CEEEEEecCCC
Q 009464          456 MQPKVDETPIPKHALGHY----ALVFDAVYTPK  484 (534)
Q Consensus       456 ~~~~~~~~~i~~~~l~~~----~~v~Dv~y~p~  484 (534)
                      |.      ++..+.+...    .+++|+.+ |.
T Consensus        87 ~~------~i~~~~~~~~~~~~~~v~Dla~-Pr  112 (135)
T PF01488_consen   87 MP------IITEEMLKKASKKLRLVIDLAV-PR  112 (135)
T ss_dssp             ST------SSTHHHHTTTCHHCSEEEES-S-S-
T ss_pred             Cc------ccCHHHHHHHHhhhhceecccc-CC
Confidence            75      3555555554    59999986 44

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=99.49  E-value=5.3e-14  Score=137.66  Aligned_cols=139  Identities=22%  Similarity=0.266  Sum_probs=102.5

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC---eEEEEeCC----HHHH-------HH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA---RVVIANRT----YDRA-------RE  422 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~---~v~i~~R~----~~~a-------~~  422 (534)
                      ..||+.+++..           +.++++++++|+||||+|+++++.|.+.|+   +|+++||+    .+++       ++
T Consensus         9 lAG~~~al~~~-----------g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~   77 (226)
T cd05311           9 LAGLLNALKLV-----------GKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNE   77 (226)
T ss_pred             HHHHHHHHHHh-----------CCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHH
Confidence            35777776542           246788999999999999999999999998   49999999    5554       45


Q ss_pred             HHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCe-Eec
Q 009464          423 LAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT-IVS  501 (534)
Q Consensus       423 la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~-ii~  501 (534)
                      +++.++...... ++.+ ....+|+|||+|+.|+.+     +.....+.+..++||++ +|..|+++++|++.|++ +.+
T Consensus        78 la~~~~~~~~~~-~l~~-~l~~~dvlIgaT~~G~~~-----~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~  149 (226)
T cd05311          78 IAKETNPEKTGG-TLKE-ALKGADVFIGVSRPGVVK-----KEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVAT  149 (226)
T ss_pred             HHHHhccCcccC-CHHH-HHhcCCEEEeCCCCCCCC-----HHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEe
Confidence            555553211111 2322 334589999999977743     11122334667999866 99999999999999996 999


Q ss_pred             cHHHHHHHHHHHH
Q 009464          502 GLEMFIGQAYEQY  514 (534)
Q Consensus       502 Gl~ml~~Qa~~qf  514 (534)
                      |..|+++|+.-.|
T Consensus       150 G~~~~~~Q~nn~~  162 (226)
T cd05311         150 GRSDFPNQVNNVL  162 (226)
T ss_pred             CCCCCccccceee
Confidence            9999999996543

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=99.48  E-value=2.9e-13  Score=129.49  Aligned_cols=169  Identities=24%  Similarity=0.242  Sum_probs=124.3

Q ss_pred             EEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-
Q 009464          352 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-  429 (534)
Q Consensus       352 G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-  429 (534)
                      |-||-....+..+++.+...       +.++++++++|+|+ |++|++++..|++.|++|++++|+.++++++++.+.. 
T Consensus         3 G~~~ta~aav~~~~~~l~~~-------~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~   75 (194)
T cd01078           3 GSNTTAAAAVAAAGKALELM-------GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR   75 (194)
T ss_pred             CcHHHHHHHHHHHHHHHHHh-------CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh
Confidence            55677777777777665431       34678999999997 9999999999999999999999999999999887641 


Q ss_pred             ---cc--c---ccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHC------
Q 009464          430 ---HA--L---SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES------  495 (534)
Q Consensus       430 ---~~--~---~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~------  495 (534)
                         ..  .   +.+++.+ ...++|+||++|+.++..    .........+..+++|++|.|..++.....+..      
T Consensus        76 ~~~~~~~~~~~~~~~~~~-~~~~~diVi~at~~g~~~----~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g  150 (194)
T cd01078          76 FGEGVGAVETSDDAARAA-AIKGADVVFAAGAAGVEL----LEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREG  150 (194)
T ss_pred             cCCcEEEeeCCCHHHHHH-HHhcCCEEEECCCCCcee----chhhhcccCceeEEEEccCCCCCCcccccccCCceecCC
Confidence               11  1   1122223 345689999999998741    111122333457999999999988877776655      


Q ss_pred             ----CCeEeccHHHHHHHHHHHHHHhc--CCCCCHHHHHHHHHh
Q 009464          496 ----GATIVSGLEMFIGQAYEQYERFT--GLPAPKELFQKIMAK  533 (534)
Q Consensus       496 ----G~~ii~Gl~ml~~Qa~~qf~lwt--g~~~p~~~~~~~~~~  533 (534)
                          |...+.|+.|.++|+... |.|.  ++..+.+.+.+..++
T Consensus       151 ~~~~g~~~~~g~~~~~~~~~~a-e~~~~~~~~~~~~~~~~~~~~  193 (194)
T cd01078         151 KVPYGAIGVGGLKMKTHRACIA-KLFESNPLVLDAEEIYDLAKE  193 (194)
T ss_pred             CeEEEeeccchhHHHHHHHHHH-HHhhcCCeeechHHHHHHHhc
Confidence                555679999999999777 8887  677787777776543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=99.24  E-value=1.4e-11  Score=124.86  Aligned_cols=120  Identities=23%  Similarity=0.290  Sum_probs=94.0

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+++++++|+|+|++|+++++.|...|++|++++|+.++.+.+. ..+.....++++.+ ...++|+|||++|.++.+.
T Consensus       147 ~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~~~~~~~l~~-~l~~aDiVint~P~~ii~~  224 (287)
T TIGR02853       147 FTIHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLIPFPLNKLEE-KVAEIDIVINTIPALVLTA  224 (287)
T ss_pred             CCCCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeeecHHHHHH-HhccCCEEEECCChHHhCH
Confidence            467899999999999999999999999999999999988765543 33333334455554 4567899999998764321


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEe--ccHHHHH
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV--SGLEMFI  507 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii--~Gl~ml~  507 (534)
                         .  ....+++..+++|+.|+|..|+| +.|++.|++.+  +|+.+.+
T Consensus       225 ---~--~l~~~k~~aliIDlas~Pg~tdf-~~Ak~~G~~a~~~~glPg~~  268 (287)
T TIGR02853       225 ---D--VLSKLPKHAVIIDLASKPGGTDF-EYAKKRGIKALLAPGLPGIV  268 (287)
T ss_pred             ---H--HHhcCCCCeEEEEeCcCCCCCCH-HHHHHCCCEEEEeCCCCccc
Confidence               1  11345677899999999999999 99999999877  8887665

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK08291 ectoine utilization protein EutC; Validated

Probab=99.18  E-value=1.5e-10  Score=119.92  Aligned_cols=151  Identities=17%  Similarity=0.134  Sum_probs=104.8

Q ss_pred             HhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHH-CCC-eEE
Q 009464          334 SIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGA-RVV  411 (534)
Q Consensus       334 ~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~-~G~-~v~  411 (534)
                      .+|++||++.+  +++|+|+|||+.|++.+..  +.           ....++++|+|+|++|++.+.++.. .+. +|+
T Consensus        97 ~tG~~~ai~~d--~~~lt~~rT~a~~~~a~~~--la-----------~~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~  161 (330)
T PRK08291         97 RTGLVEALLLD--NGYLTDVRTAAAGAVAARH--LA-----------REDASRAAVIGAGEQARLQLEALTLVRPIREVR  161 (330)
T ss_pred             CCCceEEEEcC--CchHHHHHHHHHHHHHHHH--hC-----------CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEE
Confidence            56999999765  7899999999999999864  21           1235789999999999999999986 566 899


Q ss_pred             EEeCCHHHHHHHHHHHcC----cccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEe-cCCChh
Q 009464          412 IANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV-YTPKIT  486 (534)
Q Consensus       412 i~~R~~~~a~~la~~~~~----~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~-y~p~~T  486 (534)
                      |+||+.++++++++++..    ....++++++ ...++|+||++|+.. .|     .+..++++++..+..+- +.|...
T Consensus       162 v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~-al~~aDiVi~aT~s~-~p-----~i~~~~l~~g~~v~~vg~d~~~~r  234 (330)
T PRK08291        162 VWARDAAKAEAYAADLRAELGIPVTVARDVHE-AVAGADIIVTTTPSE-EP-----ILKAEWLHPGLHVTAMGSDAEHKN  234 (330)
T ss_pred             EEcCCHHHHHHHHHHHhhccCceEEEeCCHHH-HHccCCEEEEeeCCC-Cc-----EecHHHcCCCceEEeeCCCCCCcc
Confidence            999999999999988742    1222344444 455789999999864 12     24556777776666653 344433


Q ss_pred             HHHHHHHHC-CCeEeccHHHH
Q 009464          487 RLLREAEES-GATIVSGLEMF  506 (534)
Q Consensus       487 ~ll~~A~~~-G~~ii~Gl~ml  506 (534)
                      .+-...-++ ..-+++-++..
T Consensus       235 Eld~~~l~~a~~v~vD~~~~~  255 (330)
T PRK08291        235 EIAPAVFAAADLYVCDRLSQT  255 (330)
T ss_pred             cCCHHHHhhCCEEEeCCHHHH
Confidence            332222222 22356665543

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=99.16  E-value=9.6e-11  Score=121.11  Aligned_cols=129  Identities=17%  Similarity=0.140  Sum_probs=97.6

Q ss_pred             HhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHH-HCCC-eEE
Q 009464          334 SIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAK-AKGA-RVV  411 (534)
Q Consensus       334 ~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~-~~G~-~v~  411 (534)
                      ..|++|+++.+  ++.++|+|||+.|++.+..  +..           ...++++|+|+|++|+..+.+|. ..+. +|+
T Consensus        94 ~tG~~~ai~~d--~~~lT~~RTaa~~~laa~~--la~-----------~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~  158 (326)
T TIGR02992        94 RTGLLQALLLD--NGYLTDVRTAAAGAVAARH--LAR-----------EDSSVVAIFGAGMQARLQLEALTLVRDIRSAR  158 (326)
T ss_pred             CCCCceEEEcC--CchHHHHHHHHHHHHHHHH--hCC-----------CCCcEEEEECCCHHHHHHHHHHHHhCCccEEE
Confidence            45999999766  7899999999999999853  221           13578999999999999999997 4676 899


Q ss_pred             EEeCCHHHHHHHHHHHcC----cccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEe-cCCC
Q 009464          412 IANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV-YTPK  484 (534)
Q Consensus       412 i~~R~~~~a~~la~~~~~----~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~-y~p~  484 (534)
                      |+||+.++++++++.+..    +....+++++ ...++|+||+||+...      ..+..++++++..+..+- +.|.
T Consensus       159 V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~-av~~aDiVvtaT~s~~------p~i~~~~l~~g~~i~~vg~~~p~  229 (326)
T TIGR02992       159 IWARDSAKAEALALQLSSLLGIDVTAATDPRA-AMSGADIIVTTTPSET------PILHAEWLEPGQHVTAMGSDAEH  229 (326)
T ss_pred             EECCCHHHHHHHHHHHHhhcCceEEEeCCHHH-HhccCCEEEEecCCCC------cEecHHHcCCCcEEEeeCCCCCC
Confidence            999999999999988742    2223344444 4567999999998631      125567888887777664 3444

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=99.04  E-value=4.1e-10  Score=114.77  Aligned_cols=120  Identities=24%  Similarity=0.266  Sum_probs=92.4

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.+++++|+|+|++|++++..|...|++|++++|+.++.+ .++.++.....++++.+ ...++|+||||+|..+.. 
T Consensus       148 ~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~-~~~~~G~~~~~~~~l~~-~l~~aDiVI~t~p~~~i~-  224 (296)
T PRK08306        148 ITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLA-RITEMGLSPFHLSELAE-EVGKIDIIFNTIPALVLT-  224 (296)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcCCeeecHHHHHH-HhCCCCEEEECCChhhhh-
Confidence            356789999999999999999999999999999999987643 34455554444455554 456799999998754311 


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEe--ccHHHHH
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV--SGLEMFI  507 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii--~Gl~ml~  507 (534)
                        ..  ....++++.+++|+.|.|..|.| ..+++.|++++  +|+.+.+
T Consensus       225 --~~--~l~~~~~g~vIIDla~~pggtd~-~~a~~~Gv~~~~~~~lpg~v  269 (296)
T PRK08306        225 --KE--VLSKMPPEALIIDLASKPGGTDF-EYAEKRGIKALLAPGLPGKV  269 (296)
T ss_pred             --HH--HHHcCCCCcEEEEEccCCCCcCe-eehhhCCeEEEEECCCCccC
Confidence              00  01345678899999999999998 88999999888  8887766

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.99  E-value=3e-10  Score=121.53  Aligned_cols=189  Identities=24%  Similarity=0.335  Sum_probs=126.7

Q ss_pred             hHHHHhhcccccCHHHHHhcCeeEEEEec-----cCCeEEEEeccHHHHHHH-----HHhhhccCCCcCCCcccccCCcE
Q 009464          317 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGKLFGYNTDYVGAISA-----IEDGLRGRLNVSGGVSSALAGKL  386 (534)
Q Consensus       317 ~K~~v~~~ld~~~~~A~~iGAvNTi~~~~-----~~g~l~G~NTD~~G~~~~-----l~~~l~~~~~~~~~~~~~l~~k~  386 (534)
                      -+.+|+.+++.....|+..|++|+++..-     ..++.++++|+..+.-.+     ++....        ...++.+++
T Consensus       113 GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~v~~~t~i~~~~~Sv~~~Av~~a~~--------~~~~~~~~~  184 (423)
T PRK00045        113 GEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKRVRTETGIGAGAVSVASAAVELAKQ--------IFGDLSGKK  184 (423)
T ss_pred             CChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhHhhhcCCCCCCcCHHHHHHHHHHH--------hhCCccCCE
Confidence            36789999999999999999999988310     146677888885543222     221100        012467899


Q ss_pred             EEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++|+|+|++|+.++..|...|+ +|++++|+.++++++++.++....+++++.+ ....+|+||+|||... |.     +
T Consensus       185 vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~-~l~~aDvVI~aT~s~~-~~-----i  257 (423)
T PRK00045        185 VLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPE-ALAEADIVISSTGAPH-PI-----I  257 (423)
T ss_pred             EEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHH-HhccCCEEEECCCCCC-cE-----E
Confidence            9999999999999999999998 8999999999999999998755545555554 4567899999997542 11     2


Q ss_pred             CccccC--------CCCEEEEEecCCChh-------------------HHHHHHHHCCCeEeccHHHHHHHHHHHHHHhc
Q 009464          466 PKHALG--------HYALVFDAVYTPKIT-------------------RLLREAEESGATIVSGLEMFIGQAYEQYERFT  518 (534)
Q Consensus       466 ~~~~l~--------~~~~v~Dv~y~p~~T-------------------~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwt  518 (534)
                      ..++++        ...+++|+. .|.+-                   ...+...+..-..+.-.+-++.+....|.-|.
T Consensus       258 ~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~~vDdl~~~~~~n~~~r~~~~~~a~~ii~~~~~~f~~~~  336 (423)
T PRK00045        258 GKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLYDVDDLQEIVEENLAQRQEAAEKAEAIVEEEVAEFMEWL  336 (423)
T ss_pred             cHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEEEHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222321        235788887 33311                   11111111111234456667888899999997


Q ss_pred             CCC
Q 009464          519 GLP  521 (534)
Q Consensus       519 g~~  521 (534)
                      ...
T Consensus       337 ~~~  339 (423)
T PRK00045        337 RSL  339 (423)
T ss_pred             Hhc
Confidence            543

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=98.97  E-value=2.4e-09  Score=113.68  Aligned_cols=188  Identities=18%  Similarity=0.200  Sum_probs=114.5

Q ss_pred             HHHHhhcccccCHHHHHhcCeeEEEEec-----cCCeEE----EEeccHHHHH-HHHHhhhccCCCcCCCcccccCCcEE
Q 009464          318 KEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGKLF----GYNTDYVGAI-SAIEDGLRGRLNVSGGVSSALAGKLF  387 (534)
Q Consensus       318 K~~v~~~ld~~~~~A~~iGAvNTi~~~~-----~~g~l~----G~NTD~~G~~-~~l~~~l~~~~~~~~~~~~~l~~k~v  387 (534)
                      ..+|+.++.+....|+..|+++.++.+-     .-||-+    |-+.....+. .+++-. ..       ...++.++++
T Consensus       113 E~QIlgQVK~A~~~A~~~g~~g~~L~~lf~~A~~~aKrVrteT~I~~~~vSv~~~Av~la-~~-------~~~~l~~kkv  184 (414)
T PRK13940        113 EPQILGQVKDSYTLSKKNHAIGKELDRVFQKVFATAKRVRSETRIGHCPVSVAFSAITLA-KR-------QLDNISSKNV  184 (414)
T ss_pred             cHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhccCCCCCCcCHHHHHHHHH-HH-------HhcCccCCEE
Confidence            5577777777777788877777766320     001111    1111111111 011100 00       1235789999


Q ss_pred             EEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHc-CcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          388 VVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       388 lVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~-~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      +|+|+||||++++.+|...|+ +|+|+||+.++++++++.++ .....++++.+ .+..+|+|||||+... |-     +
T Consensus       185 lviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~-~l~~aDiVI~aT~a~~-~v-----i  257 (414)
T PRK13940        185 LIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQ-LIKKADIIIAAVNVLE-YI-----V  257 (414)
T ss_pred             EEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHH-HhccCCEEEECcCCCC-ee-----E
Confidence            999999999999999999998 89999999999999999986 45566777665 5677999999998642 11     1


Q ss_pred             CccccC-CCCEEEEEecCCCh-------------------hHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCC
Q 009464          466 PKHALG-HYALVFDAVYTPKI-------------------TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP  521 (534)
Q Consensus       466 ~~~~l~-~~~~v~Dv~y~p~~-------------------T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~  521 (534)
                      ..+... ...+++|+.- |..                   ........+..-..+.-.+.++.+.+..|.-|....
T Consensus       258 ~~~~~~~~~~~~iDLav-PRdidp~v~~l~~v~l~~iDdl~~i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~~~  332 (414)
T PRK13940        258 TCKYVGDKPRVFIDISI-PQALDPKLGELEQNVYYCVDDINAVIEDNKDKRKYESSKAQKIIVKSLEEYLEKEKAI  332 (414)
T ss_pred             CHHHhCCCCeEEEEeCC-CCCCCccccCcCCeEEEeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            111111 1245666652 221                   111111111111234456778889999999998543

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=98.96  E-value=2e-09  Score=112.73  Aligned_cols=197  Identities=23%  Similarity=0.313  Sum_probs=122.7

Q ss_pred             HHHHhhcccccCHHHHHhcCeeEEEEec-----cCCeE------EEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcE
Q 009464          318 KEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGKL------FGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL  386 (534)
Q Consensus       318 K~~v~~~ld~~~~~A~~iGAvNTi~~~~-----~~g~l------~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~  386 (534)
                      ..+|+.++......|+.-|.+.+++..-     +-|+-      +|.|-=..+... ++  +...      ...++++++
T Consensus       110 E~QILGQVK~Ay~~a~~~g~~g~~L~~lFqkAi~~gKrvRseT~I~~~~VSi~saA-v~--lA~~------~~~~L~~~~  180 (414)
T COG0373         110 ETQILGQVKDAYAKAQENGTLGKVLNRLFQKAISVGKRVRSETGIGKGAVSISSAA-VE--LAKR------IFGSLKDKK  180 (414)
T ss_pred             cHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhcccCCCCCccchHHHH-HH--HHHH------HhcccccCe
Confidence            4567777777777777777777665320     01211      222211122111 11  1100      124588999


Q ss_pred             EEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++|+|||.||.-+|++|.+.|+ +|+|+|||.++|++||++++..+..++++.+ .+..+|+||.+|+... |-.....+
T Consensus       181 vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~-~l~~~DvVissTsa~~-~ii~~~~v  258 (414)
T COG0373         181 VLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLE-ALAEADVVISSTSAPH-PIITREMV  258 (414)
T ss_pred             EEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHH-hhhhCCEEEEecCCCc-cccCHHHH
Confidence            9999999999999999999998 9999999999999999999988888998887 6788999999998542 22111111


Q ss_pred             CccccCC-CCEEEEEecCCChh---------------HHHHHHHH----CCCeEeccHHHHHHHHHHHHHHhcCCCCCHH
Q 009464          466 PKHALGH-YALVFDAVYTPKIT---------------RLLREAEE----SGATIVSGLEMFIGQAYEQYERFTGLPAPKE  525 (534)
Q Consensus       466 ~~~~l~~-~~~v~Dv~y~p~~T---------------~ll~~A~~----~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~  525 (534)
                      ....-.. ..+++|+.- |...               .-++..-+    ..-..+.-.+.++++....|..|-...--.+
T Consensus       259 e~a~~~r~~~livDiav-PRdie~~v~~l~~v~l~~iDDL~~iv~~n~~~R~~~~~~ae~iIeee~~~~~~~l~~~~~~~  337 (414)
T COG0373         259 ERALKIRKRLLIVDIAV-PRDVEPEVGELPNVFLYTIDDLEEIVEENLEARKEEAAKAEAIIEEELAEFMEWLKKLEVVP  337 (414)
T ss_pred             HHHHhcccCeEEEEecC-CCCCCccccCcCCeEEEehhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchH
Confidence            1111111 147888873 4421               01111111    1112455667788888888888875443333


Q ss_pred             H
Q 009464          526 L  526 (534)
Q Consensus       526 ~  526 (534)
                      .
T Consensus       338 ~  338 (414)
T COG0373         338 T  338 (414)
T ss_pred             H
Confidence            3

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.75  E-value=4.6e-09  Score=104.21  Aligned_cols=127  Identities=19%  Similarity=0.190  Sum_probs=84.7

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--------ccccccccc---------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--------LSLADLENF---------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--------~~~~~~~~~---------~~~  443 (534)
                      ..+++++|+|| +|+|+++|+.|++.|++|+++.|+.++++++++++....        +++.+.++.         ...
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            46789999999 899999999999999999999999999999999986321        233222110         224


Q ss_pred             CceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEeccHHHHHHHHHHH
Q 009464          444 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSGLEMFIGQAYEQ  513 (534)
Q Consensus       444 ~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~Gl~ml~~Qa~~q  513 (534)
                      ..|++|||+|.|....     +.+..+..-.-.+++|....   ...+++.+.++| ..|+|-.++...|....
T Consensus        84 ~IdvLVNNAG~g~~g~-----f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~  152 (265)
T COG0300          84 PIDVLVNNAGFGTFGP-----FLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY  152 (265)
T ss_pred             cccEEEECCCcCCccc-----hhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc
Confidence            6899999999986542     22222222222344443211   245666676663 36777666665544333

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.74  E-value=2.4e-09  Score=103.69  Aligned_cols=117  Identities=27%  Similarity=0.387  Sum_probs=84.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cc----ccccc----------ccccCCCCc
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA----LSLAD----------LENFNPEDG  445 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~----~~~~~----------~~~~~~~~~  445 (534)
                      +++|.++|+|| +|+|.++|+.|++.|++|++++|..+++++++.+++. ..    .++.|          +.+ ..++.
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~-~~g~i   82 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPE-EFGRI   82 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHH-hhCcc
Confidence            45799999999 7999999999999999999999999999999999983 21    12222          122 46789


Q ss_pred             eEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCC-eEeccHH
Q 009464          446 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGA-TIVSGLE  504 (534)
Q Consensus       446 divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~-~ii~Gl~  504 (534)
                      |++||++|+...     .|+.......+..++|+|-...   ...++..+.+++. .++|-.+
T Consensus        83 DiLvNNAGl~~g-----~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~S  140 (246)
T COG4221          83 DILVNNAGLALG-----DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGS  140 (246)
T ss_pred             cEEEecCCCCcC-----ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecc
Confidence            999999987532     2344444444567888886533   3466777777632 6666443

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.62  E-value=2.6e-08  Score=99.64  Aligned_cols=127  Identities=24%  Similarity=0.323  Sum_probs=86.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----c-c----cccccccc---c------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H-A----LSLADLEN---F------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~-~----~~~~~~~~---~------  440 (534)
                      ..+.+|.|+|+|| .|+|+++|+.|+++|++++++.|..++.+.+++++..    + .    +++.+.++   +      
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            4578999999999 7999999999999999999999988888888666632    2 1    22222211   0      


Q ss_pred             CCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC--h-hHHHHHHHHCC-CeEeccHHHHHHHHH
Q 009464          441 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK--I-TRLLREAEESG-ATIVSGLEMFIGQAY  511 (534)
Q Consensus       441 ~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~--~-T~ll~~A~~~G-~~ii~Gl~ml~~Qa~  511 (534)
                      ..++.|++|||+|.+. ..    ...........-+||+||...  . ..++..++++| .+|+.--++.-+++.
T Consensus        88 ~fg~vDvLVNNAG~~~-~~----~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~  157 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISL-VG----FLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL  157 (282)
T ss_pred             hcCCCCEEEecCcccc-cc----ccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC
Confidence            5678999999999875 22    111222222245899998754  2 36677788875 566665555544443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.47  E-value=3.2e-07  Score=95.74  Aligned_cols=125  Identities=27%  Similarity=0.332  Sum_probs=90.2

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHcCc----cccccc---ccccCCCCceEEEEcCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH----ALSLAD---LENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~~~~----~~~~~~---~~~~~~~~~divVn~t~~g~  456 (534)
                      ++++|+|+|++|+++|+-|++.| .+|++++||.+++.++......+    .++..+   +.+ .+.+.|+|||+.|...
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~-li~~~d~VIn~~p~~~   80 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVA-LIKDFDLVINAAPPFV   80 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHH-HHhcCCEEEEeCCchh
Confidence            57999999999999999999999 59999999999999987765322    122222   223 3456799999987432


Q ss_pred             CCCCCCCCCCccccCCCCEEEEEecCCCh-hHHHHHHHHCCCeEeccH-------HHHHHHHHHHHH
Q 009464          457 QPKVDETPIPKHALGHYALVFDAVYTPKI-TRLLREAEESGATIVSGL-------EMFIGQAYEQYE  515 (534)
Q Consensus       457 ~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~-T~ll~~A~~~G~~ii~Gl-------~ml~~Qa~~qf~  515 (534)
                      .     ..+-...++.+.-++|++|.+.. -.+-..|+++|..++.|.       ..++.+++.+|.
T Consensus        81 ~-----~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~  142 (389)
T COG1748          81 D-----LTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELF  142 (389)
T ss_pred             h-----HHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHHhh
Confidence            1     12334566777889999998665 345556888898777643       456677777665

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.42  E-value=2.1e-07  Score=92.77  Aligned_cols=132  Identities=17%  Similarity=0.228  Sum_probs=90.7

Q ss_pred             cccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--c----ccccccc----------cccCC
Q 009464          380 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H----ALSLADL----------ENFNP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~----~~~~~~~----------~~~~~  442 (534)
                      .+++|+.|||+|+| |+||++|..++++|+++++++.+.+-.++..+++..  +    .+++.+.          .+ ..
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~-e~  112 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKK-EV  112 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHH-hc
Confidence            56889999999995 999999999999999999999999888888777752  1    1233222          22 46


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHH-CCCeEeccHHHHHHHHHHHHHHh
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEE-SGATIVSGLEMFIGQAYEQYERF  517 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~-~G~~ii~Gl~ml~~Qa~~qf~lw  517 (534)
                      +..||+||++|+-...  .....+++.+   .-.+|+|....   ...|+..+.+ +.+.+|+-.+++-+-+.....-|
T Consensus       113 G~V~ILVNNAGI~~~~--~ll~~~d~ei---~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Y  186 (300)
T KOG1201|consen  113 GDVDILVNNAGIVTGK--KLLDCSDEEI---QKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADY  186 (300)
T ss_pred             CCceEEEeccccccCC--CccCCCHHHH---HHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhh
Confidence            7899999999986431  2223344444   33566765432   3478888877 45678887777755444433333

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.42  E-value=3.7e-06  Score=84.64  Aligned_cols=182  Identities=19%  Similarity=0.269  Sum_probs=113.9

Q ss_pred             EecC-CCccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHH--hhcccccCHH
Q 009464          260 GIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTV  331 (534)
Q Consensus       260 ~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v--~~~ld~~~~~  331 (534)
                      -++| +|-+++-- ..--+.++++|++.....++-+    ++.+.++.+ .++++.|+-|-.|+-..+  ...++.+++ 
T Consensus        38 i~vg~~~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p-  115 (286)
T PRK14175         38 ILVGNDGASQSYV-RSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINP-  115 (286)
T ss_pred             EEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc-
Confidence            3455 44444333 2335578999999888777752    466666666 467899999999964221  111222221 


Q ss_pred             HHHhcCeeEEEEeccCCeEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHHHHHHHHH
Q 009464          332 AKSIGAVNCIIRRQSDGKLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKA  405 (534)
Q Consensus       332 A~~iGAvNTi~~~~~~g~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~graia~~L~~  405 (534)
                      .+.+-..+..-    -|+++ |.    -.--.|+++.|+..           +.+++||+++|+|.|+ +|+.++..|.+
T Consensus       116 ~KDVDGl~~~n----~g~l~~~~~~~~PcTp~ai~~ll~~~-----------~i~l~Gk~vvVIGrs~~VG~pla~lL~~  180 (286)
T PRK14175        116 EKDVDGFHPIN----IGKLYIDEQTFVPCTPLGIMEILKHA-----------DIDLEGKNAVVIGRSHIVGQPVSKLLLQ  180 (286)
T ss_pred             ccCcccCCccc----hHhHhcCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCCchhHHHHHHHHHH
Confidence            11111111110    11221 10    11145666655432           3578999999999998 99999999999


Q ss_pred             CCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          406 KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       406 ~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .|++|+++++....   +.              + ...++|+||+++|..   .    .+..++++++.+|+|+-.++
T Consensus       181 ~gatVtv~~s~t~~---l~--------------~-~~~~ADIVIsAvg~p---~----~i~~~~vk~gavVIDvGi~~  233 (286)
T PRK14175        181 KNASVTILHSRSKD---MA--------------S-YLKDADVIVSAVGKP---G----LVTKDVVKEGAVIIDVGNTP  233 (286)
T ss_pred             CCCeEEEEeCCchh---HH--------------H-HHhhCCEEEECCCCC---c----ccCHHHcCCCcEEEEcCCCc
Confidence            99999999875322   21              1 234589999999753   1    25667888899999999876

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.40  E-value=9.5e-07  Score=94.47  Aligned_cols=133  Identities=27%  Similarity=0.429  Sum_probs=90.6

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      .+.+++++|+|+|.+|+.++..|...|+ +|+++||+.++++++++.++.....++++.+ ....+|+||+||+... |.
T Consensus       177 ~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~-~l~~aDvVi~aT~s~~-~i  254 (417)
T TIGR01035       177 SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEE-YLAEADIVISSTGAPH-PI  254 (417)
T ss_pred             CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHH-HHhhCCEEEECCCCCC-ce
Confidence            4678999999999999999999999996 9999999999999999988765545555555 4567899999997542 11


Q ss_pred             CCCCCCCccccC-------CCCEEEEEecCCChh-H--------------HHHHHHHCC----CeEeccHHHHHHHHHHH
Q 009464          460 VDETPIPKHALG-------HYALVFDAVYTPKIT-R--------------LLREAEESG----ATIVSGLEMFIGQAYEQ  513 (534)
Q Consensus       460 ~~~~~i~~~~l~-------~~~~v~Dv~y~p~~T-~--------------ll~~A~~~G----~~ii~Gl~ml~~Qa~~q  513 (534)
                           +..+++.       ...+++|+. .|.+- |              -++...+.+    -..+.-.+-++.+....
T Consensus       255 -----i~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~~vDdl~~~~~~n~~~r~~~~~~a~~ii~~~~~~  328 (417)
T TIGR01035       255 -----VSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLYDVDDLQPVVEENLAERREEAEKAEEIVEEETAE  328 (417)
T ss_pred             -----EcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEEEHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence                 2323221       124788887 44411 1              111111111    12244556678888899


Q ss_pred             HHHhcCCC
Q 009464          514 YERFTGLP  521 (534)
Q Consensus       514 f~lwtg~~  521 (534)
                      |.-|....
T Consensus       329 f~~w~~~~  336 (417)
T TIGR01035       329 FKQWLRSL  336 (417)
T ss_pred             HHHHHHhc
Confidence            99998644

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN00203 glutamyl-tRNA reductase

Probab=98.40  E-value=9.7e-07  Score=96.26  Aligned_cols=187  Identities=20%  Similarity=0.233  Sum_probs=112.4

Q ss_pred             HHHHhhcccccCHHHHHhcCeeEEEEec-----cCCeEEEEecc----HHH----HHHHHHhhhccCCCcCCCcccccCC
Q 009464          318 KEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----SDGKLFGYNTD----YVG----AISAIEDGLRGRLNVSGGVSSALAG  384 (534)
Q Consensus       318 K~~v~~~ld~~~~~A~~iGAvNTi~~~~-----~~g~l~G~NTD----~~G----~~~~l~~~l~~~~~~~~~~~~~l~~  384 (534)
                      ..+|+.++.+....|+..|+++.++.+-     .-|+-+-.-|.    ...    .+.-.++.+.         ..++.+
T Consensus       196 E~QIlgQVK~A~~~A~~~g~~g~~L~~LF~~Ai~~~KrVRteT~I~~~~vSv~s~Av~la~~~~~---------~~~l~~  266 (519)
T PLN00203        196 EGQILAQVKQVVKVGQGVDGFGRNLSGLFKHAITAGKRVRTETNIASGAVSVSSAAVELALMKLP---------ESSHAS  266 (519)
T ss_pred             ChHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhcC---------CCCCCC
Confidence            4578888888888888888887766330     00111111111    111    1111111110         123778


Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc---ccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~---~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      ++++|+|+|+||++++..|...|+ +|+++||+.++++++++.++..   ...++++.+ ....+|+||+||+.+. |. 
T Consensus       267 kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~-al~~aDVVIsAT~s~~-pv-  343 (519)
T PLN00203        267 ARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLA-CAAEADVVFTSTSSET-PL-  343 (519)
T ss_pred             CEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHH-HHhcCCEEEEccCCCC-Ce-
Confidence            999999999999999999999998 8999999999999999987421   224444444 4567899999998653 21 


Q ss_pred             CCCCCCccccC----------CCCEEEEEecCCCh-------------------hHHHHHHHHCCCeEeccHHHHHHHHH
Q 009464          461 DETPIPKHALG----------HYALVFDAVYTPKI-------------------TRLLREAEESGATIVSGLEMFIGQAY  511 (534)
Q Consensus       461 ~~~~i~~~~l~----------~~~~v~Dv~y~p~~-------------------T~ll~~A~~~G~~ii~Gl~ml~~Qa~  511 (534)
                          +..++++          ...+++|+.- |..                   ......-++..-..+.-.+.++.+..
T Consensus       344 ----I~~e~l~~~~~~~~~~~~~~~~IDLAv-PRdIdp~v~~l~~v~lydiDdL~~i~~~n~~~R~~~~~~Ae~II~ee~  418 (519)
T PLN00203        344 ----FLKEHVEALPPASDTVGGKRLFVDISV-PRNVGACVSELESARVYNVDDLKEVVAANKEDRLRKAMEAQTIIREES  418 (519)
T ss_pred             ----eCHHHHHHhhhcccccCCCeEEEEeCC-CCCCccccccCCCCeEEEeccHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence                1111110          1246777763 221                   11111111111123445677788889


Q ss_pred             HHHHHhcCCC
Q 009464          512 EQYERFTGLP  521 (534)
Q Consensus       512 ~qf~lwtg~~  521 (534)
                      ..|.-|....
T Consensus       419 ~~F~~w~~~~  428 (519)
T PLN00203        419 KNFEAWRDSL  428 (519)
T ss_pred             HHHHHHHHhc
Confidence            9999998543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=98.38  E-value=5.1e-06  Score=79.92  Aligned_cols=131  Identities=20%  Similarity=0.240  Sum_probs=88.8

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  436 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~  436 (534)
                      +.|...+++..+....+     +.+++||+++|+|.|.+|+.+++.|.+.|++|++++++.++.+++++.++....+.++
T Consensus         6 g~Gv~~~~~~~~~~~~~-----~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~   80 (200)
T cd01075           6 AYGVFLGMKAAAEHLLG-----TDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEE   80 (200)
T ss_pred             HHHHHHHHHHHHHHhcC-----CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchh
Confidence            46776666655443211     3578999999999999999999999999999999999999999988877544333333


Q ss_pred             ccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCCh-hHHHHHHHHCCCeEec
Q 009464          437 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-TRLLREAEESGATIVS  501 (534)
Q Consensus       437 ~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~-T~ll~~A~~~G~~ii~  501 (534)
                      +..   ..+|++++|+.-+.-   +...+  ..++ ...+++-.-+|.. -.--+..+++|+.+++
T Consensus        81 l~~---~~~Dv~vp~A~~~~I---~~~~~--~~l~-~~~v~~~AN~~~~~~~~~~~L~~~Gi~~~P  137 (200)
T cd01075          81 IYS---VDADVFAPCALGGVI---NDDTI--PQLK-AKAIAGAANNQLADPRHGQMLHERGILYAP  137 (200)
T ss_pred             hcc---ccCCEEEeccccccc---CHHHH--HHcC-CCEEEECCcCccCCHhHHHHHHHCCCEEeC
Confidence            222   368999988753311   11111  1232 3578888767664 2344445778887766

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06141 ornithine cyclodeaminase; Validated

Probab=98.35  E-value=3.9e-06  Score=86.47  Aligned_cols=115  Identities=21%  Similarity=0.211  Sum_probs=80.4

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHHcCc---ccccccccccCCCCceEEEEcCCCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~~---~~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      ..++++|+|+|++|+.++.++.. .+. +|+|+||+.++++++++++...   ....++..+ ...++|+||++|+.. .
T Consensus       124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~-av~~aDIVi~aT~s~-~  201 (314)
T PRK06141        124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEA-AVRQADIISCATLST-E  201 (314)
T ss_pred             CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHH-HHhcCCEEEEeeCCC-C
Confidence            46899999999999999987776 565 8999999999999999987421   222333443 345789999999853 1


Q ss_pred             CCCCCCCCCccccCCCCEEEEEecC--CChhHHHHHHHHCCCeEeccHHH
Q 009464          458 PKVDETPIPKHALGHYALVFDAVYT--PKITRLLREAEESGATIVSGLEM  505 (534)
Q Consensus       458 ~~~~~~~i~~~~l~~~~~v~Dv~y~--p~~T~ll~~A~~~G~~ii~Gl~m  505 (534)
                      |     .+..++++++. ++|+++.  |....+-....+++..+++=.+-
T Consensus       202 p-----vl~~~~l~~g~-~i~~ig~~~~~~~El~~~~~~~a~~~vD~~~~  245 (314)
T PRK06141        202 P-----LVRGEWLKPGT-HLDLVGNFTPDMRECDDEAIRRASVYVDTRAG  245 (314)
T ss_pred             C-----EecHHHcCCCC-EEEeeCCCCcccccCCHHHHhcCcEEEcCHHH
Confidence            1     24567787766 7888864  33334444455555566776543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.29  E-value=3.3e-05  Score=78.24  Aligned_cols=201  Identities=19%  Similarity=0.168  Sum_probs=124.6

Q ss_pred             HHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEe----c
Q 009464          275 YNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRR----Q  345 (534)
Q Consensus       275 hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~----~  345 (534)
                      -.+.++++|++..-..++-    +++.+.++.+ .++.+.|+-|-+|+-.    ++|+    -+.+.+++.-.--    +
T Consensus        54 k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~----~i~~----~~i~~~I~p~KDVDGl~~  125 (301)
T PRK14194         54 KILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPA----HIDE----ARVLQAINPLKDVDGFHS  125 (301)
T ss_pred             HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCC----CCCH----HHHHhccCchhccCccCh
Confidence            3557899999988777764    2566666666 4678999999999642    1111    1122222221100    0


Q ss_pred             -cCCeE-EEEe----ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          346 -SDGKL-FGYN----TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       346 -~~g~l-~G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~  418 (534)
                       +-|++ .|.+    .--.|+++-|+..           +.++.||+++|+|.| -+|+.++..|.+.|+.|++++|+..
T Consensus       126 ~N~g~l~~~~~~~~PcTp~aii~lL~~~-----------~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        126 ENVGGLSQGRDVLTPCTPSGCLRLLEDT-----------CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             hhhhHHhcCCCCCCCCcHHHHHHHHHHh-----------CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence             00111 1111    1145666655432           357899999999995 8999999999999999999987644


Q ss_pred             HHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCCh----------hHH
Q 009464          419 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI----------TRL  488 (534)
Q Consensus       419 ~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~----------T~l  488 (534)
                      ..+++                  ...+|+||.++|..       ..+...+++++.+|+|+..+...          -.|
T Consensus       195 ~l~e~------------------~~~ADIVIsavg~~-------~~v~~~~ik~GaiVIDvgin~~~~~g~~kl~GDvdf  249 (301)
T PRK14194        195 DAKAL------------------CRQADIVVAAVGRP-------RLIDADWLKPGAVVIDVGINRIDDDGRSRLVGDVDF  249 (301)
T ss_pred             CHHHH------------------HhcCCEEEEecCCh-------hcccHhhccCCcEEEEecccccCCCCCcceecccch
Confidence            22221                  23579999888643       12556678899999999876421          222


Q ss_pred             HHHHHHCCC-eEecc------HHHHHHHHHHHHHHhcC
Q 009464          489 LREAEESGA-TIVSG------LEMFIGQAYEQYERFTG  519 (534)
Q Consensus       489 l~~A~~~G~-~ii~G------l~ml~~Qa~~qf~lwtg  519 (534)
                      -...+..++ .-++|      ..||.+..+.+.+.|.-
T Consensus       250 ~~~~~~a~~iTPVPGGVGp~Tva~L~~N~~~a~~~~~~  287 (301)
T PRK14194        250 DSALPVVSAITPVPGGVGPMTIAFLMKNTVTAARLQAH  287 (301)
T ss_pred             HHHHhhcceecCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            222223333 22443      47888888888887753

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=98.23  E-value=8.9e-06  Score=75.94  Aligned_cols=79  Identities=23%  Similarity=0.224  Sum_probs=62.3

Q ss_pred             cccCCcEEEEEcCchh-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGA-GKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~-graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .++.+|+++|+|+|++ |+.++..|.+.|++|++++|+.+...+                  ...++|+||++|+...  
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~------------------~l~~aDiVIsat~~~~--   99 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE------------------HTKQADIVIVAVGKPG--   99 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH------------------HHhhCCEEEEcCCCCc--
Confidence            4689999999999996 998999999999999999998643221                  2345899999998531  


Q ss_pred             CCCCCCCCccccCCCCEEEEEecCC
Q 009464          459 KVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                           .+..+.+++..+++|+...+
T Consensus       100 -----ii~~~~~~~~~viIDla~pr  119 (168)
T cd01080         100 -----LVKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             -----eecHHHccCCeEEEEccCCC
Confidence                 35666777778999998543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08339 short chain dehydrogenase; Provisional

Probab=98.23  E-value=6.4e-07  Score=89.63  Aligned_cols=121  Identities=19%  Similarity=0.187  Sum_probs=76.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----Ccc----ccccc---cccc-----CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD---LENF-----NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~~----~~~~~---~~~~-----~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.    .+.    .++.+   +..+     ..
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI   83 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence            3567899999999 799999999999999999999999998888876652    111    12221   1110     23


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEeccHHH
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSGLEM  505 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~Gl~m  505 (534)
                      +..|++||+++.....  .....+.+.|   ...+++++...   ...+++.+++++ .++++-.++
T Consensus        84 g~iD~lv~nag~~~~~--~~~~~~~~~~---~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~  145 (263)
T PRK08339         84 GEPDIFFFSTGGPKPG--YFMEMSMEDW---EGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSV  145 (263)
T ss_pred             CCCcEEEECCCCCCCC--CcccCCHHHH---HHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence            5689999999864211  1112222222   33556665432   235666666553 356554443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=98.22  E-value=4.3e-06  Score=83.34  Aligned_cols=74  Identities=23%  Similarity=0.282  Sum_probs=55.7

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~di  447 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+..+...    .++.+   ..++      ..+..|+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            56899999999 899999999999999999999999998888876543221    12221   1110      2357899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      +||++++.
T Consensus        83 li~~Ag~~   90 (262)
T TIGR03325        83 LIPNAGIW   90 (262)
T ss_pred             EEECCCCC
Confidence            99999864

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.21  E-value=7.3e-05  Score=75.21  Aligned_cols=196  Identities=19%  Similarity=0.250  Sum_probs=123.5

Q ss_pred             HHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEeccCCe
Q 009464          275 YNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGK  349 (534)
Q Consensus       275 hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~~~g~  349 (534)
                      -.+.++++|++.....++.    +++.+.++.+ .+.++.|+-|-.|+...+    |+    -+.+.+++.-.--  || 
T Consensus        54 k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~----~~----~~i~~~I~p~KDV--DG-  122 (285)
T PRK10792         54 KRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHI----DN----VKVLERIHPDKDV--DG-  122 (285)
T ss_pred             HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCC----CH----HHHHhccCccccc--Cc-
Confidence            3567899999988777764    2566666666 467899999999975211    11    0112222211100  11 


Q ss_pred             EEEEe-------------ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHHHHHHHHHCCCeEEEEeC
Q 009464          350 LFGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       350 l~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~graia~~L~~~G~~v~i~~R  415 (534)
                      ++-+|             ---.|+++.|+..           +.++.||+++|+|-|. .|+.++..|.+.|+.|+++.+
T Consensus       123 l~~~n~g~l~~~~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs  191 (285)
T PRK10792        123 FHPYNVGRLAQRIPLLRPCTPRGIMTLLERY-----------GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHR  191 (285)
T ss_pred             cChhhHhHHhCCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEEC
Confidence            11111             1245666665542           3578999999999986 899999999999999999986


Q ss_pred             CHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC-------hhHH
Q 009464          416 TYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK-------ITRL  488 (534)
Q Consensus       416 ~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~-------~T~l  488 (534)
                      ....                 +.+ ...++|+||+++|..   .    .+..++++++.+|+|+-.++.       +..|
T Consensus       192 ~T~~-----------------l~~-~~~~ADIvi~avG~p---~----~v~~~~vk~gavVIDvGin~~~~gk~~GDvd~  246 (285)
T PRK10792        192 FTKN-----------------LRH-HVRNADLLVVAVGKP---G----FIPGEWIKPGAIVIDVGINRLEDGKLVGDVEF  246 (285)
T ss_pred             CCCC-----------------HHH-HHhhCCEEEEcCCCc---c----cccHHHcCCCcEEEEcccccccCCCcCCCcCH
Confidence            5321                 112 234689999998742   1    366788999999999997752       1222


Q ss_pred             HHHHHHC-C-CeEecc------HHHHHHHHHHHHHHhc
Q 009464          489 LREAEES-G-ATIVSG------LEMFIGQAYEQYERFT  518 (534)
Q Consensus       489 l~~A~~~-G-~~ii~G------l~ml~~Qa~~qf~lwt  518 (534)
                       ..+++. . +.-++|      ..||+...+.+.+.|.
T Consensus       247 -~~~~~~a~~itPvPGGVGp~T~a~L~~N~~~a~~~~~  283 (285)
T PRK10792        247 -ETAAERASWITPVPGGVGPMTVATLLENTLQACEEYH  283 (285)
T ss_pred             -HHHHhhccCcCCCCCCChHHHHHHHHHHHHHHHHHhh
Confidence             222222 2 122222      4788888888777764

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.21  E-value=1.4e-06  Score=88.82  Aligned_cols=76  Identities=29%  Similarity=0.428  Sum_probs=59.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc--c----cccccc---ccc------CCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--A----LSLADL---ENF------NPE  443 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~----~~~~~~---~~~------~~~  443 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++..  .    +++.+.   .++      ..+
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4578899999999 89999999999999999999999999999988877521  1    222221   110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus        85 ~id~vI~nAG~~   96 (296)
T PRK05872         85 GIDVVVANAGIA   96 (296)
T ss_pred             CCCEEEECCCcC
Confidence            789999999875

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=98.20  E-value=5.3e-06  Score=82.69  Aligned_cols=74  Identities=23%  Similarity=0.326  Sum_probs=56.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~di  447 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++...    .++.+   +.++      ..+..|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            56899999999 899999999999999999999999999988887764321    12211   1110      2357899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      +||++++.
T Consensus        84 li~~ag~~   91 (263)
T PRK06200         84 FVGNAGIW   91 (263)
T ss_pred             EEECCCCc
Confidence            99999864

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.20  E-value=3.1e-06  Score=87.10  Aligned_cols=102  Identities=35%  Similarity=0.469  Sum_probs=73.4

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ++.+++++|+|+|.+|+.++..|...|+ +|++++|+.+++++++++++....+++++.+ ....+|+||.||+......
T Consensus       175 ~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~-~l~~aDvVi~at~~~~~~~  253 (311)
T cd05213         175 NLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLE-LLNEADVVISATGAPHYAK  253 (311)
T ss_pred             CccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHH-HHhcCCEEEECCCCCchHH
Confidence            3678999999999999999999999887 8999999999999999998765555555554 4556899999998542100


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCCh
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKI  485 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~  485 (534)
                       ............+.+++|+. .|..
T Consensus       254 -~~~~~~~~~~~~~~~viDla-vPrd  277 (311)
T cd05213         254 -IVERAMKKRSGKPRLIVDLA-VPRD  277 (311)
T ss_pred             -HHHHHHhhCCCCCeEEEEeC-CCCC
Confidence             00000001112456899998 5553

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.19  E-value=5e-06  Score=87.49  Aligned_cols=100  Identities=21%  Similarity=0.253  Sum_probs=71.7

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----cccccccccCCCCceEEEEcCCCCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      +.+++++|+|+|.+|+.++..+...|++|++++|+.++++.+...++...    ...+++.+ ....+|+||||+++...
T Consensus       165 l~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~-~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       165 VEPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIED-AVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CCCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHH-HHccCCEEEEccccCCC
Confidence            45678999999999999999999999999999999999988887775421    11233334 34578999999866211


Q ss_pred             CCCCCCCCCc---cccCCCCEEEEEecCCC
Q 009464          458 PKVDETPIPK---HALGHYALVFDAVYTPK  484 (534)
Q Consensus       458 ~~~~~~~i~~---~~l~~~~~v~Dv~y~p~  484 (534)
                      +.  ..-+..   ..++++.+++|+.+.+.
T Consensus       244 ~~--p~lit~~~l~~mk~g~vIvDva~d~G  271 (370)
T TIGR00518       244 KA--PKLVSNSLVAQMKPGAVIVDVAIDQG  271 (370)
T ss_pred             CC--CcCcCHHHHhcCCCCCEEEEEecCCC
Confidence            11  111222   23567789999998654

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.19  E-value=4.1e-06  Score=85.94  Aligned_cols=80  Identities=31%  Similarity=0.412  Sum_probs=63.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---------ccccccccc-------c--
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---------ALSLADLEN-------F--  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---------~~~~~~~~~-------~--  440 (534)
                      .++.+++++|+|+ .|+|+++|+.|+.+|++|++..|+.++++++++.+...         .+++.++.+       +  
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            5678899999999 89999999999999999999999999999999888631         123333221       0  


Q ss_pred             CCCCceEEEEcCCCCCCCC
Q 009464          441 NPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       441 ~~~~~divVn~t~~g~~~~  459 (534)
                      .....|++||++|+...|.
T Consensus       111 ~~~~ldvLInNAGV~~~~~  129 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPF  129 (314)
T ss_pred             cCCCccEEEeCcccccCCc
Confidence            3457899999999876543

>PRK05854 short chain dehydrogenase; Provisional

Probab=98.18  E-value=3.9e-06  Score=86.34  Aligned_cols=77  Identities=27%  Similarity=0.365  Sum_probs=58.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----cccccccc---c------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLADLEN---F------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~~~~---~------  440 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..     ..    +++.+..+   +      
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999 8999999999999999999999999988887766521     11    12222111   0      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|+|||++++..
T Consensus        90 ~~~~iD~li~nAG~~~  105 (313)
T PRK05854         90 EGRPIHLLINNAGVMT  105 (313)
T ss_pred             hCCCccEEEECCcccc
Confidence            2356899999998753

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.11  E-value=6.4e-06  Score=82.95  Aligned_cols=99  Identities=28%  Similarity=0.375  Sum_probs=68.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc------c----cccc---cccc---c--
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH------A----LSLA---DLEN---F--  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~------~----~~~~---~~~~---~--  440 (534)
                      ..+.+|.++|+|+ .|+|+++|..|+++|++|++++|+.++.++.+..+...      .    ++..   +..+   .  
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            4578999999999 69999999999999999999999999988888775421      1    1111   1110   0  


Q ss_pred             -C-CCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecC
Q 009464          441 -N-PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT  482 (534)
Q Consensus       441 -~-~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~  482 (534)
                       . .++.|++||+++...... .....+++.|   ..++++|..
T Consensus        84 ~~~~GkidiLvnnag~~~~~~-~~~~~s~e~~---d~~~~~Nl~  123 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTG-SILDLSEEVF---DKIMATNLR  123 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCC-ChhhCCHHHH---HHHHhhhch
Confidence             2 578999999998765321 1222333333   456677655

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.09  E-value=6.6e-05  Score=75.52  Aligned_cols=183  Identities=22%  Similarity=0.296  Sum_probs=112.9

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHH--hhcccccCH
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  330 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v--~~~ld~~~~  330 (534)
                      .-++| +|-+.+-- ..--+.++++|++.....++-+    ++...++.+ .+.++.|+-|-.|+...+  ...++.+++
T Consensus        43 ii~vg~d~aS~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p  121 (287)
T PRK14176         43 TILVGDDPASKMYV-RLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDP  121 (287)
T ss_pred             EEEECCCcchHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCc
Confidence            34556 44333322 2335578999999988877653    566666666 467899999999975321  111111111


Q ss_pred             HHHHhcCeeEEEEeccCCeEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHHHHHHHH
Q 009464          331 VAKSIGAVNCIIRRQSDGKLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAK  404 (534)
Q Consensus       331 ~A~~iGAvNTi~~~~~~g~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~graia~~L~  404 (534)
                      . +.+-..+..    +-|++. |.    ----.|+++.|+..           +.++.||+++|+|.|. .|+.++..|.
T Consensus       122 ~-KDVDGl~~~----N~g~l~~g~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~vvViGrs~iVGkPla~lL~  185 (287)
T PRK14176        122 A-KDADGFHPY----NMGKLMIGDEGLVPCTPHGVIRALEEY-----------GVDIEGKNAVIVGHSNVVGKPMAAMLL  185 (287)
T ss_pred             c-ccccccChh----hhhhHhcCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCCcccHHHHHHHHH
Confidence            0 000000000    001111 10    11245666665542           3578999999999986 8999999999


Q ss_pred             HCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          405 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       405 ~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      +.|+.|+++......                 +.+ ...++|+||+++|..   .    .+..++++++.+|+|+-.+.
T Consensus       186 ~~~atVtv~hs~T~~-----------------l~~-~~~~ADIvv~AvG~p---~----~i~~~~vk~gavVIDvGin~  239 (287)
T PRK14176        186 NRNATVSVCHVFTDD-----------------LKK-YTLDADILVVATGVK---H----LIKADMVKEGAVIFDVGITK  239 (287)
T ss_pred             HCCCEEEEEeccCCC-----------------HHH-HHhhCCEEEEccCCc---c----ccCHHHcCCCcEEEEecccc
Confidence            999999999843221                 111 234589999998753   1    35678999999999998764

>PRK08589 short chain dehydrogenase; Validated

Probab=98.08  E-value=3.7e-06  Score=84.49  Aligned_cols=73  Identities=25%  Similarity=0.379  Sum_probs=54.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----cccccc---ccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~---~~~------~~~~  444 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+ ++++++++++..   ..    +++.+.   ..+      ..+.
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            56899999999 899999999999999999999999 777777666531   11    122111   110      2456


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|++||+++..
T Consensus        83 id~li~~Ag~~   93 (272)
T PRK08589         83 VDVLFNNAGVD   93 (272)
T ss_pred             cCEEEECCCCC
Confidence            89999999864

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.08  E-value=1.1e-05  Score=83.40  Aligned_cols=94  Identities=27%  Similarity=0.390  Sum_probs=72.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHHc-CcccccccccccCCCCceEEEEcCCCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~-~G~-~v~i~~R~~~~a~~la~~~~-~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      .++++|+++|+|| |.+|+.++..|.+ .|+ ++++++|+.+++++++.++. ....   ++.+ ....+|+||++|+..
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~---~l~~-~l~~aDiVv~~ts~~  226 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL---SLEE-ALPEADIVVWVASMP  226 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH---hHHH-HHccCCEEEECCcCC
Confidence            4688999999999 8999999999986 476 99999999999999998875 2322   2333 445689999999864


Q ss_pred             CCCCCCCCCCCccccCCCCEEEEEecC
Q 009464          456 MQPKVDETPIPKHALGHYALVFDAVYT  482 (534)
Q Consensus       456 ~~~~~~~~~i~~~~l~~~~~v~Dv~y~  482 (534)
                      ..     ..+..+.+.+..+++|+.+-
T Consensus       227 ~~-----~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        227 KG-----VEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             cC-----CcCCHHHhCCCeEEEEecCC
Confidence            21     12445566777899999863

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.08  E-value=1.1e-05  Score=80.84  Aligned_cols=117  Identities=24%  Similarity=0.288  Sum_probs=75.1

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--------cccc-------cccc-cCCCCce
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--------LSLA-------DLEN-FNPEDGM  446 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--------~~~~-------~~~~-~~~~~~d  446 (534)
                      |+=++|+|| .|+||+.|..|+++|.+|++++||.+|++++++++....        .++.       .+.+ +......
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg  128 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG  128 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence            477999999 699999999999999999999999999999999886321        1221       1111 1223567


Q ss_pred             EEEEcCCCCCC-CCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEeccHH
Q 009464          447 ILANTTSIGMQ-PKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVSGLE  504 (534)
Q Consensus       447 ivVn~t~~g~~-~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~Gl~  504 (534)
                      |+|||+|.... |. .....+...+   .-++.+|-.+.   ..-++..|.++ .+.|+|--+
T Consensus       129 ILVNNvG~~~~~P~-~f~~~~~~~~---~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS  187 (312)
T KOG1014|consen  129 ILVNNVGMSYDYPE-SFLKYPEGEL---QNIINVNILSVTLLTQLILPGMVERKKGIIVNIGS  187 (312)
T ss_pred             EEEecccccCCCcH-HHHhCchhhh---hheeEEecchHHHHHHHhhhhhhcCCCceEEEecc
Confidence            89999876531 11 1112222222   45777876653   23455666664 235555433

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.06  E-value=7.7e-05  Score=75.10  Aligned_cols=167  Identities=19%  Similarity=0.239  Sum_probs=106.1

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHh--hcccccCHHHHHhcCeeEEEEeccCC
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG  348 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~--~~ld~~~~~A~~iGAvNTi~~~~~~g  348 (534)
                      -+.++++|++.....++-    +++.+.++.+ .+.++.|+-|-.|+-..+-  ..++.+++ .+.+-..+..    +-|
T Consensus        54 ~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p-~KDVDGl~~~----n~g  128 (285)
T PRK14189         54 VKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAP-EKDVDGFHVA----NAG  128 (285)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCc-ccCcccCChh----hhh
Confidence            557899999988777774    3566667666 4678999999999742110  11111111 0111111110    001


Q ss_pred             eEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchh-HHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 009464          349 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA-GKALAYGAKAKGARVVIANRTYDRARE  422 (534)
Q Consensus       349 ~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~-graia~~L~~~G~~v~i~~R~~~~a~~  422 (534)
                      ++. |.    -.--.|+++-|+..           +.++.||+++|+|.|++ |+.++..|.+.|+.|+++.+...    
T Consensus       129 ~l~~~~~~~~PcTp~aii~lL~~~-----------~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~----  193 (285)
T PRK14189        129 ALMTGQPLFRPCTPYGVMKMLESI-----------GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR----  193 (285)
T ss_pred             HhhCCCCCCcCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC----
Confidence            111 11    01145666655431           35789999999999877 99999999999999999864322    


Q ss_pred             HHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          423 LAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       423 la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                                   ++.+ ...++|+||.++|.   |.    .+..++++++.+|+|+-.++
T Consensus       194 -------------~l~~-~~~~ADIVV~avG~---~~----~i~~~~ik~gavVIDVGin~  233 (285)
T PRK14189        194 -------------DLAA-HTRQADIVVAAVGK---RN----VLTADMVKPGATVIDVGMNR  233 (285)
T ss_pred             -------------CHHH-HhhhCCEEEEcCCC---cC----ccCHHHcCCCCEEEEccccc
Confidence                         1222 33468999999873   22    36778999999999998775

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.05  E-value=7.1e-06  Score=82.80  Aligned_cols=74  Identities=15%  Similarity=0.277  Sum_probs=52.9

Q ss_pred             cCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHcCc-c--ccccccc---cc------CCC
Q 009464          382 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSLADLE---NF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~-~--~~~~~~~---~~------~~~  443 (534)
                      +++|+++|+|+   +|+|+++|..|++.|++|++++|+.   ++++++.++++.. .  +++.+.+   ++      ..+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999998   4999999999999999999999985   3455555554422 1  1222211   10      346


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||++++.
T Consensus        83 ~iDilVnnAG~~   94 (274)
T PRK08415         83 KIDFIVHSVAFA   94 (274)
T ss_pred             CCCEEEECCccC
Confidence            789999999864

>PRK08618 ornithine cyclodeaminase; Validated

Probab=98.05  E-value=1.3e-05  Score=82.97  Aligned_cols=94  Identities=19%  Similarity=0.324  Sum_probs=69.1

Q ss_pred             CCcEEEEEcCchhHHHHHHHHH-HCCC-eEEEEeCCHHHHHHHHHHHcC----cccccccccccCCCCceEEEEcCCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAK-AKGA-RVVIANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~-~~G~-~v~i~~R~~~~a~~la~~~~~----~~~~~~~~~~~~~~~~divVn~t~~g~  456 (534)
                      ..++++|+|+|++|+..+.++. ..++ +|.|++|+.++++++++.+..    +...+++.++ ....+|+||+|||.+ 
T Consensus       126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~aDiVi~aT~s~-  203 (325)
T PRK08618        126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADE-AIEEADIIVTVTNAK-  203 (325)
T ss_pred             CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEccCCC-
Confidence            3578999999999999998876 4577 899999999999999987642    2223444444 446789999999865 


Q ss_pred             CCCCCCCCCCccccCCCCEEEEEe-cCCC
Q 009464          457 QPKVDETPIPKHALGHYALVFDAV-YTPK  484 (534)
Q Consensus       457 ~~~~~~~~i~~~~l~~~~~v~Dv~-y~p~  484 (534)
                      .|     .+. ++++++..|.-+= |.|.
T Consensus       204 ~p-----~i~-~~l~~G~hV~~iGs~~p~  226 (325)
T PRK08618        204 TP-----VFS-EKLKKGVHINAVGSFMPD  226 (325)
T ss_pred             Cc-----chH-HhcCCCcEEEecCCCCcc
Confidence            22     256 7888877765552 3443

>PRK07340 ornithine cyclodeaminase; Validated

Probab=98.02  E-value=3.5e-05  Score=79.02  Aligned_cols=97  Identities=22%  Similarity=0.203  Sum_probs=69.7

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHHcCcccc--cccccccCCCCceEEEEcCCCCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGHALS--LADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~~~~~--~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      ..++++|+|+|++|+..+.++.. .+. +|.|++|+.++++++++++......  .++.++ ...++|+||+||+.. . 
T Consensus       124 ~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~-av~~aDiVitaT~s~-~-  200 (304)
T PRK07340        124 PPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEA-IPEAVDLVVTATTSR-T-  200 (304)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHH-HhhcCCEEEEccCCC-C-
Confidence            46899999999999999999976 576 8999999999999999988532111  233444 456799999999854 2 


Q ss_pred             CCCCCCCCccccCCCCEEEEEe-cCCChhH
Q 009464          459 KVDETPIPKHALGHYALVFDAV-YTPKITR  487 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~-y~p~~T~  487 (534)
                           |+-..+++++..+.-+- |.|...+
T Consensus       201 -----Pl~~~~~~~g~hi~~iGs~~p~~~E  225 (304)
T PRK07340        201 -----PVYPEAARAGRLVVAVGAFTPDMAE  225 (304)
T ss_pred             -----ceeCccCCCCCEEEecCCCCCCccc
Confidence                 32233677766554443 5565444

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=98.02  E-value=1.1e-05  Score=75.41  Aligned_cols=74  Identities=31%  Similarity=0.418  Sum_probs=59.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--cc----cc----------cccccccCCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LS----------LADLENFNPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~----------~~~~~~~~~~~  444 (534)
                      +..|.++|+|+ .|+|||++..|++.|++|.+.+++.+.|++.+..++.  ..    ++          +++..+ .++.
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k-~~g~   90 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEK-SLGT   90 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHH-hcCC
Confidence            45689999999 5999999999999999999999999999999999875  21    11          112222 5678


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      ++++|||+++..
T Consensus        91 psvlVncAGItr  102 (256)
T KOG1200|consen   91 PSVLVNCAGITR  102 (256)
T ss_pred             CcEEEEcCcccc
Confidence            999999999874

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=98.01  E-value=4.6e-05  Score=62.98  Aligned_cols=79  Identities=32%  Similarity=0.505  Sum_probs=59.8

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcccccc
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLA  435 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~  435 (534)
                      +.|++..|+...+.       .+.++.+++++|+|+|++|+.++..|.+.|. +|++++|                    
T Consensus         3 ~~~~~~~l~~~~~~-------~~~~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r--------------------   55 (86)
T cd05191           3 AAGAVALLKAAGKV-------TNKSLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR--------------------   55 (86)
T ss_pred             hHHHHHHHHHHHHH-------hCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--------------------
Confidence            56777777664432       1245789999999999999999999999955 9999988                    


Q ss_pred             cccccCCCCceEEEEcCCCCCCCCCCCCCCCc---cccCCCCEEEEE
Q 009464          436 DLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDA  479 (534)
Q Consensus       436 ~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~---~~l~~~~~v~Dv  479 (534)
                                |++|++++.+.       ++.+   ..+.+..+++|+
T Consensus        56 ----------di~i~~~~~~~-------~~~~~~~~~~~~~~~v~~~   85 (86)
T cd05191          56 ----------DILVTATPAGV-------PVLEEATAKINEGAVVIDL   85 (86)
T ss_pred             ----------CEEEEcCCCCC-------CchHHHHHhcCCCCEEEec
Confidence                      89999998652       1222   455677888886

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.01  E-value=4.7e-06  Score=78.57  Aligned_cols=75  Identities=24%  Similarity=0.312  Sum_probs=58.1

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cccccccccc------c---CCCCceEE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HALSLADLEN------F---NPEDGMIL  448 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~~~~~~~~~------~---~~~~~div  448 (534)
                      +.|-++||+|+ .|+|++.|+.+.++|-+|+|++|+.+++++.......   .+++..|...      +   .....+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            45779999999 5999999999999999999999999999888776542   2334433221      1   34568999


Q ss_pred             EEcCCCCC
Q 009464          449 ANTTSIGM  456 (534)
Q Consensus       449 Vn~t~~g~  456 (534)
                      |||+|+..
T Consensus        83 iNNAGIqr   90 (245)
T COG3967          83 INNAGIQR   90 (245)
T ss_pred             eecccccc
Confidence            99998753

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.01  E-value=1.3e-05  Score=79.53  Aligned_cols=118  Identities=19%  Similarity=0.227  Sum_probs=69.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHcCcc----ccccc---cccc------CCCCc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~~~~----~~~~~---~~~~------~~~~~  445 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.. +.++..+..+.+.    .++.+   +.++      ..+..
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999 89999999999999999999998743 2222233333221    12211   1110      24578


Q ss_pred             eEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC--CCeEeccH
Q 009464          446 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES--GATIVSGL  503 (534)
Q Consensus       446 divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~--G~~ii~Gl  503 (534)
                      |++||+++.....  ....++.+.|   ..++++++...   ...+++.+++.  +.++++-.
T Consensus        85 D~lv~~ag~~~~~--~~~~~~~~~~---~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~is  142 (251)
T PRK12481         85 DILINNAGIIRRQ--DLLEFGNKDW---DDVININQKTVFFLSQAVAKQFVKQGNGGKIINIA  142 (251)
T ss_pred             CEEEECCCcCCCC--CcccCCHHHH---HHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeC
Confidence            9999999865321  1112233333   44677876533   23444555443  24555433

>PRK05717 oxidoreductase; Validated

Probab=97.98  E-value=9.8e-06  Score=80.34  Aligned_cols=76  Identities=26%  Similarity=0.364  Sum_probs=57.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cc----cc--CCCCc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LE----NF--NPEDG  445 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~----~~--~~~~~  445 (534)
                      ..+++|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.+.++...    .++.+   +.    +.  ..+.+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999 899999999999999999999999888887776654321    12221   11    10  23468


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |++||+++..
T Consensus        86 d~li~~ag~~   95 (255)
T PRK05717         86 DALVCNAAIA   95 (255)
T ss_pred             CEEEECCCcc
Confidence            9999999865

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.98  E-value=3.3e-06  Score=86.50  Aligned_cols=47  Identities=23%  Similarity=0.309  Sum_probs=40.1

Q ss_pred             cccCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Q 009464          380 SALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  427 (534)
Q Consensus       380 ~~l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~  427 (534)
                      .+++||+++|+|+   .|+|+++|+.|++.|++|++ .|+.+++++++..+
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~   54 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSL   54 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhh
Confidence            4588999999999   79999999999999999988 77777776665443

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.97  E-value=7.5e-05  Score=75.78  Aligned_cols=161  Identities=22%  Similarity=0.202  Sum_probs=102.3

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEeccC---
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSD---  347 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~~~---  347 (534)
                      -+.++++|++..-..++-    +++.+.++.+ .+.++.|+-|-.|+-..    +|   +. +.+.+++--.--  |   
T Consensus        54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~----~~---~~-~i~~~I~p~KDV--DGl~  123 (296)
T PRK14188         54 GKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKH----LD---SE-AVIQAIDPEKDV--DGLH  123 (296)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC----CC---HH-HHHhccCccccc--ccCC
Confidence            457899999976665553    3566666666 46789999999997421    11   11 111111111100  1   


Q ss_pred             ----CeEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEc-CchhHHHHHHHHHHCCCeEEEE-eCC
Q 009464          348 ----GKLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIG-AGGAGKALAYGAKAKGARVVIA-NRT  416 (534)
Q Consensus       348 ----g~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlG-aGG~graia~~L~~~G~~v~i~-~R~  416 (534)
                          |++. |.    ----.|+++-|+..           +.+++||+++|+| +|-+|+.+|..|.+.|+.|+++ +||
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~-----------~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT  192 (296)
T PRK14188        124 VVNAGRLATGETALVPCTPLGCMMLLRRV-----------HGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT  192 (296)
T ss_pred             hhhHHHHhCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence                1110 00    01145666655431           3578999999999 6899999999999999999999 487


Q ss_pred             HHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          417 YDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       417 ~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .+ .++                  ....+|+||.+++..       ..+...+++++.+++|+-.+.
T Consensus       193 ~~-l~e------------------~~~~ADIVIsavg~~-------~~v~~~~lk~GavVIDvGin~  233 (296)
T PRK14188        193 RD-LPA------------------VCRRADILVAAVGRP-------EMVKGDWIKPGATVIDVGINR  233 (296)
T ss_pred             CC-HHH------------------HHhcCCEEEEecCCh-------hhcchheecCCCEEEEcCCcc
Confidence            53 111                  123479999888742       125566788889999998764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.96  E-value=9.9e-06  Score=80.45  Aligned_cols=74  Identities=19%  Similarity=0.215  Sum_probs=51.7

Q ss_pred             ccCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~----~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|++   |+|++++..|++.|++|++.+|+. +.++..+++.. ..    +++.+   +.++      ..+
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            3678999999995   999999999999999999999984 44444444321 11    12221   1110      246


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++..
T Consensus        83 ~iD~lv~nAg~~   94 (252)
T PRK06079         83 KIDGIVHAIAYA   94 (252)
T ss_pred             CCCEEEEccccc
Confidence            789999999864

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.96  E-value=0.00025  Score=71.40  Aligned_cols=181  Identities=18%  Similarity=0.252  Sum_probs=110.3

Q ss_pred             ecC-CCccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHH--hhcccccCHHH
Q 009464          261 IIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVA  332 (534)
Q Consensus       261 liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v--~~~ld~~~~~A  332 (534)
                      ++| +|-+++-- ..-.+.++++|++.....++-+    ++.+.++.+ .++.+.|+-|-.|+...+  ...++.+++. 
T Consensus        38 ~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~-  115 (285)
T PRK14191         38 LVGKDPASQTYV-NMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPN-  115 (285)
T ss_pred             EeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcc-
Confidence            456 34333332 2335678999999887777752    566666666 467899999999974211  1111111110 


Q ss_pred             HHhcCeeEEEEeccCCeEE-EEe----ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHC
Q 009464          333 KSIGAVNCIIRRQSDGKLF-GYN----TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK  406 (534)
Q Consensus       333 ~~iGAvNTi~~~~~~g~l~-G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~  406 (534)
                      +.+-..+..-    -|+++ |.+    ---.|+++-|+..           +.++.||+++|+|.| -.|+.++..|.+.
T Consensus       116 KDVDGl~~~n----~g~l~~g~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~  180 (285)
T PRK14191        116 KDVDGFHPLN----IGKLCSQLDGFVPATPMGVMRLLKHY-----------HIEIKGKDVVIIGASNIVGKPLAMLMLNA  180 (285)
T ss_pred             ccccccChhh----HHHHhcCCCCCCCCcHHHHHHHHHHh-----------CCCCCCCEEEEECCCchhHHHHHHHHHHC
Confidence            1111111100    01111 100    1235555555431           357899999999997 8999999999999


Q ss_pred             CCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          407 GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       407 G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      |+.|+++.....   .+.+               ...++|+||.++|..       ..+..++++++.+|+|+-.++
T Consensus       181 gAtVtv~hs~t~---~l~~---------------~~~~ADIvV~AvG~p-------~~i~~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        181 GASVSVCHILTK---DLSF---------------YTQNADIVCVGVGKP-------DLIKASMVKKGAVVVDIGINR  232 (285)
T ss_pred             CCEEEEEeCCcH---HHHH---------------HHHhCCEEEEecCCC-------CcCCHHHcCCCcEEEEeeccc
Confidence            999999864322   2221               224579999988642       136678899999999998765

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.94  E-value=2.6e-05  Score=80.88  Aligned_cols=76  Identities=26%  Similarity=0.389  Sum_probs=57.8

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----cccccc---ccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.   .+.    .++.+.   .++      ..+
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            356899999999 899999999999999999999999999988877653   221    122221   110      236


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|++|||++++.
T Consensus        84 ~iD~lVnnAG~~~   96 (330)
T PRK06139         84 RIDVWVNNVGVGA   96 (330)
T ss_pred             CCCEEEECCCcCC
Confidence            7899999998764

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.93  E-value=7.6e-06  Score=84.54  Aligned_cols=46  Identities=26%  Similarity=0.545  Sum_probs=42.4

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG  428 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~  428 (534)
                      .|+.++|+|| ||+|+++|..|++.|++|++++|+.++.+++++++.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~   98 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQ   98 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
Confidence            5899999999 899999999999999999999999999988887763

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.93  E-value=4.3e-06  Score=88.54  Aligned_cols=123  Identities=24%  Similarity=0.376  Sum_probs=82.6

Q ss_pred             EEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcC-c----cccc---ccccccCCCCceEEEEcCCCCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG-H----ALSL---ADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~-~----~~~~---~~~~~~~~~~~divVn~t~~g~  456 (534)
                      |+|+|+|.+|++++..|++.+-  +|++++|+.++++++++.+.. .    ..+.   +++.+ ...+.|+||||+|...
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~-~~~~~dvVin~~gp~~   79 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAE-LLRGCDVVINCAGPFF   79 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHH-HHTTSSEEEE-SSGGG
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHH-HHhcCCEEEECCccch
Confidence            6899999999999999999874  899999999999999876432 1    1222   22333 3456799999987431


Q ss_pred             CCCCCCCCCCccccCCCCEEEEEec-CCChhHHHHHHHHCCCeEeccH-------HHHHHHHHHHHH
Q 009464          457 QPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESGATIVSGL-------EMFIGQAYEQYE  515 (534)
Q Consensus       457 ~~~~~~~~i~~~~l~~~~~v~Dv~y-~p~~T~ll~~A~~~G~~ii~Gl-------~ml~~Qa~~qf~  515 (534)
                           ..++-...++.+.-.+|..| ......+-+.|+++|..++.|.       ++++.+++.++.
T Consensus        80 -----~~~v~~~~i~~g~~yvD~~~~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~  141 (386)
T PF03435_consen   80 -----GEPVARACIEAGVHYVDTSYVTEEMLALDEEAKEAGVTALPGCGFDPGLSNLLARYAADELD  141 (386)
T ss_dssp             -----HHHHHHHHHHHT-EEEESS-HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHH
T ss_pred             -----hHHHHHHHHHhCCCeeccchhHHHHHHHHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhh
Confidence                 12333455666778999766 3444566677888998888654       678889999888

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.92  E-value=1.8e-05  Score=79.26  Aligned_cols=74  Identities=18%  Similarity=0.275  Sum_probs=49.9

Q ss_pred             cCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHcCc-c--ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~-~--~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|++   |+|++++..|++.|++|++.+|+.   +.++++....+.. .  +++.+   +.++      ..+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            568999999994   899999999999999999999873   2233333322210 1  12221   1110      346


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++++
T Consensus        84 ~iD~linnAg~~   95 (262)
T PRK07984         84 KFDGFVHSIGFA   95 (262)
T ss_pred             CCCEEEECCccC
Confidence            789999999864

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.92  E-value=2.5e-05  Score=77.37  Aligned_cols=75  Identities=28%  Similarity=0.368  Sum_probs=57.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~  443 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .++.+   +.++      ..+
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            467899999999 8999999999999999999999999998888877631   11    12211   1110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++..
T Consensus        86 ~id~lv~~ag~~   97 (253)
T PRK05867         86 GIDIAVCNAGII   97 (253)
T ss_pred             CCCEEEECCCCC
Confidence            789999999865

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.91  E-value=2.9e-05  Score=77.43  Aligned_cols=75  Identities=32%  Similarity=0.362  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+..|
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            356899999999 899999999999999999999999998888887765321    12221   1110      235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++||+++..
T Consensus        83 ~lv~~ag~~   91 (261)
T PRK08265         83 ILVNLACTY   91 (261)
T ss_pred             EEEECCCCC
Confidence            999999764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.91  E-value=1.4e-05  Score=79.89  Aligned_cols=74  Identities=16%  Similarity=0.268  Sum_probs=50.0

Q ss_pred             cCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHcCc---cccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH---ALSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~---~~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+   +|+|+++|..|++.|++|++..|+.   ++++++.++.+..   .+++.+   +.++      ..+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            56899999994   5999999999999999999987653   3344444332211   112221   1110      346


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++|||+++.
T Consensus        84 ~iD~lVnnAG~~   95 (261)
T PRK08690         84 GLDGLVHSIGFA   95 (261)
T ss_pred             CCcEEEECCccC
Confidence            799999999875

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.90  E-value=2.2e-05  Score=78.27  Aligned_cols=118  Identities=19%  Similarity=0.134  Sum_probs=66.4

Q ss_pred             cCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCH------HHHHHHHHHHcC-cc--cccccc---ccc------
Q 009464          382 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY------DRARELAETVGG-HA--LSLADL---ENF------  440 (534)
Q Consensus       382 l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~------~~a~~la~~~~~-~~--~~~~~~---~~~------  440 (534)
                      +++|+++|+|+   +|+|+++|+.|++.|++|++..|+.      +.++++.+.... ..  .++.+.   .++      
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            56899999997   4999999999999999998886543      333444332211 11  122221   110      


Q ss_pred             CCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCeEec
Q 009464          441 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGATIVS  501 (534)
Q Consensus       441 ~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii~  501 (534)
                      ..+..|++|||++...... ...++.+.......-.+++++...   ...+++.+++.| ++++
T Consensus        84 ~~g~iD~lv~nag~~~~~~-~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g-~Iv~  145 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEE-LIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG-SIVT  145 (258)
T ss_pred             HcCCCCEEEEcccccCccc-ccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC-eEEE
Confidence            2467899999998642100 011222211222345778886532   234555555544 4443

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.90  E-value=3e-05  Score=75.96  Aligned_cols=75  Identities=11%  Similarity=0.219  Sum_probs=55.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccc---cccccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSL---ADLENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~---~~~~~~------~~~  443 (534)
                      ++++|+++|+|+ +|+|++++..|++.|++|++++|+.++.+++.+++.   .+.    ++.   +++.++      ..+
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            356899999999 699999999999999999999999999888876652   111    111   111110      235


Q ss_pred             -CceEEEEcCCCC
Q 009464          444 -DGMILANTTSIG  455 (534)
Q Consensus       444 -~~divVn~t~~g  455 (534)
                       ..|++||+++..
T Consensus        82 ~~iD~li~nag~~   94 (227)
T PRK08862         82 RAPDVLVNNWTSS   94 (227)
T ss_pred             CCCCEEEECCccC
Confidence             789999999743

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.90  E-value=0.00011  Score=73.96  Aligned_cols=196  Identities=23%  Similarity=0.285  Sum_probs=121.1

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEeccCCeE
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKL  350 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~~~g~l  350 (534)
                      .+.++++|++.....++-    +++.+.++.+ .+..+.|+-|-.|+-..+    |+    -+.+.+++.-.--  || +
T Consensus        54 ~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i----~~----~~i~~~I~p~KDV--DG-l  122 (284)
T PRK14179         54 ERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHI----NE----EKILLAIDPKKDV--DG-F  122 (284)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCC----CH----HHHHhccCccccc--cc-c
Confidence            467899999998887774    3566666666 467899999999974221    11    1111111111100  11 1


Q ss_pred             EEEec-------------cHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC
Q 009464          351 FGYNT-------------DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       351 ~G~NT-------------D~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~  416 (534)
                      +-+|.             --.|+++-|+..           +.++.||+++|+|. |-+|+.++..|.+.|+.|+++...
T Consensus       123 ~~~N~g~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~  191 (284)
T PRK14179        123 HPMNTGHLWSGRPVMIPCTPAGIMEMFREY-----------NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSR  191 (284)
T ss_pred             CHhhHHHHhCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCC
Confidence            11111             134555555431           35789999999999 889999999999999999998322


Q ss_pred             HHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCCh-------hHHH
Q 009464          417 YDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-------TRLL  489 (534)
Q Consensus       417 ~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~-------T~ll  489 (534)
                      .+   .              +.+ ...++|+||.++|..       ..+...+++++.+|+|+-.+...       -.|-
T Consensus       192 t~---~--------------l~~-~~~~ADIVI~avg~~-------~~v~~~~ik~GavVIDvgin~~~~gkl~GDVdf~  246 (284)
T PRK14179        192 TR---N--------------LAE-VARKADILVVAIGRG-------HFVTKEFVKEGAVVIDVGMNRDENGKLIGDVDFD  246 (284)
T ss_pred             CC---C--------------HHH-HHhhCCEEEEecCcc-------ccCCHHHccCCcEEEEecceecCCCCeecCccHH
Confidence            11   1              111 234589999888742       12566789999999999877521       1221


Q ss_pred             HHHHH-CCC-eEecc------HHHHHHHHHHHHHHhcC
Q 009464          490 REAEE-SGA-TIVSG------LEMFIGQAYEQYERFTG  519 (534)
Q Consensus       490 ~~A~~-~G~-~ii~G------l~ml~~Qa~~qf~lwtg  519 (534)
                       .+++ .++ .-++|      ..||......+.+.|..
T Consensus       247 -~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~  283 (284)
T PRK14179        247 -EVAEVASYITPVPGGVGPMTITMLMEQTYQAALRSLH  283 (284)
T ss_pred             -HHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence             2222 222 22222      57888888888777753

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.90  E-value=4e-05  Score=77.23  Aligned_cols=75  Identities=19%  Similarity=0.242  Sum_probs=56.6

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~~  444 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..   +.    .++.+..   ++      ..+.
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999 8999999999999999999999999888887766632   11    1222211   10      2356


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||++++..
T Consensus        84 id~li~nAg~~~   95 (275)
T PRK05876         84 VDVVFSNAGIVV   95 (275)
T ss_pred             CCEEEECCCcCC
Confidence            899999998753

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.88  E-value=3.2e-05  Score=76.85  Aligned_cols=75  Identities=28%  Similarity=0.331  Sum_probs=57.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----ccccc---cccc------C
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LENF------N  441 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~---~~~~------~  441 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++..     ..    .++.+   +.++      .
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            367899999999 8999999999999999999999999998888777632     11    12221   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|++||+++..
T Consensus        84 ~g~id~li~~ag~~   97 (260)
T PRK07063         84 FGPLDVLVNNAGIN   97 (260)
T ss_pred             hCCCcEEEECCCcC
Confidence            35789999999865

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.88  E-value=4.2e-05  Score=75.74  Aligned_cols=76  Identities=29%  Similarity=0.415  Sum_probs=56.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---c----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---A----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~----~~~~~---~~~~------~~~  443 (534)
                      ++++|+++|+|+ |++|++++..|++.|++|++.+|+.++.+++.+.+...   .    .++.+   +.++      ..+
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            467899999999 99999999999999999999999998887776665321   1    12211   1110      235


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||+++...
T Consensus        87 ~~d~li~~ag~~~   99 (255)
T PRK07523         87 PIDILVNNAGMQF   99 (255)
T ss_pred             CCCEEEECCCCCC
Confidence            6899999997653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.87  E-value=3.4e-05  Score=79.37  Aligned_cols=115  Identities=21%  Similarity=0.280  Sum_probs=72.6

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHcCc---c----ccccccc---cc------CCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH---A----LSLADLE---NF------NPED  444 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~~~~---~----~~~~~~~---~~------~~~~  444 (534)
                      .+|+++|+|+ +|+|++++..|++.| ++|++++|+.++++++++++...   .    +++.+..   ++      ..+.
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            3689999999 899999999999999 89999999999998888776421   1    1222111   10      2356


Q ss_pred             ceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC---CeEec
Q 009464          445 GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG---ATIVS  501 (534)
Q Consensus       445 ~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G---~~ii~  501 (534)
                      .|++||++++.. +......++.+.+   ..++++|+...   ...+++.+++.+   .++|+
T Consensus        82 iD~lI~nAG~~~-~~~~~~~~~~~~~---~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~  140 (314)
T TIGR01289        82 LDALVCNAAVYF-PTAKEPRFTADGF---ELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLII  140 (314)
T ss_pred             CCEEEECCCccc-cCccccccCHHHH---HHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence            899999998642 1111111222222   44677776543   234555565542   35554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.87  E-value=2.6e-05  Score=79.45  Aligned_cols=77  Identities=29%  Similarity=0.364  Sum_probs=58.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      ..+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..   ..    .++.+   +.++      ..
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5577899999999 8999999999999999999999999998888776531   11    12211   1110      23


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|++||+++.+.
T Consensus       116 g~id~li~~AG~~~  129 (293)
T PRK05866        116 GGVDILINNAGRSI  129 (293)
T ss_pred             CCCCEEEECCCCCC
Confidence            57899999998753

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.86  E-value=0.0012  Score=66.57  Aligned_cols=203  Identities=18%  Similarity=0.237  Sum_probs=123.1

Q ss_pred             HHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHHh--hcccccCHHHHHhcCeeEEEEeccCC
Q 009464          276 NEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSDG  348 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v~--~~ld~~~~~A~~iGAvNTi~~~~~~g  348 (534)
                      .+.++++|++.....++-+    ++.+.++.+ .+.++.|+-|-+|+...+-  ..++.+++. +.+-..+..-    -|
T Consensus        54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~-KDVDGl~~~n----~g  128 (284)
T PRK14190         54 KKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPE-KDVDGFHPIN----VG  128 (284)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcc-ccccccCHhh----HH
Confidence            5678999999988777753    566666666 4678999999999753211  111111110 1111111100    01


Q ss_pred             eEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 009464          349 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE  422 (534)
Q Consensus       349 ~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~~  422 (534)
                      +++ |.    ----.|+++-|+..           +.+++||+++|+|.+ -.|+.++..|.++|+.|+++......   
T Consensus       129 ~l~~~~~~~~PcTp~av~~lL~~~-----------~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~---  194 (284)
T PRK14190        129 RMMLGQDTFLPCTPHGILELLKEY-----------NIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKN---  194 (284)
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchh---
Confidence            110 00    01134555555431           367899999999995 77999999999999999998643221   


Q ss_pred             HHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCCh-------hHHHHHHHH-
Q 009464          423 LAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-------TRLLREAEE-  494 (534)
Q Consensus       423 la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~-------T~ll~~A~~-  494 (534)
                      +.              + ...++|+||.++|..   .    .+..++++++.+|+|+-.+...       -.| ..+++ 
T Consensus       195 l~--------------~-~~~~ADIvI~AvG~p---~----~i~~~~ik~gavVIDvGi~~~~~gkl~GDvd~-e~v~~~  251 (284)
T PRK14190        195 LA--------------E-LTKQADILIVAVGKP---K----LITADMVKEGAVVIDVGVNRLENGKLCGDVDF-DNVKEK  251 (284)
T ss_pred             HH--------------H-HHHhCCEEEEecCCC---C----cCCHHHcCCCCEEEEeeccccCCCCeeccCcH-HHHhhh
Confidence            11              1 224579999988642   1    3678899999999999876421       123 22333 


Q ss_pred             CCC-eEec-c-----HHHHHHHHHHHHHHhcCC
Q 009464          495 SGA-TIVS-G-----LEMFIGQAYEQYERFTGL  520 (534)
Q Consensus       495 ~G~-~ii~-G-----l~ml~~Qa~~qf~lwtg~  520 (534)
                      .++ .-++ |     ..||...-+.+.+.|.|+
T Consensus       252 a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~  284 (284)
T PRK14190        252 ASYITPVPGGVGPMTITMLMHNTVELAKRAGGR  284 (284)
T ss_pred             ceEecCCCCCChHHHHHHHHHHHHHHHHHhhcC
Confidence            232 1122 2     578888888888777653

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.86  E-value=5.5e-05  Score=75.80  Aligned_cols=74  Identities=31%  Similarity=0.353  Sum_probs=56.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc-Ccc--cccccc----------cccCCCCceE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-GHA--LSLADL----------ENFNPEDGMI  447 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~-~~~--~~~~~~----------~~~~~~~~di  447 (534)
                      +++++++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+. ...  +++.+.          .+ ..+..|+
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~   81 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEA-DLGPIDV   81 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence            46789999999 899999999999999999999999999888877664 111  222221          11 2356899


Q ss_pred             EEEcCCCCC
Q 009464          448 LANTTSIGM  456 (534)
Q Consensus       448 vVn~t~~g~  456 (534)
                      +||++++..
T Consensus        82 li~~ag~~~   90 (273)
T PRK07825         82 LVNNAGVMP   90 (273)
T ss_pred             EEECCCcCC
Confidence            999998753

>PRK06196 oxidoreductase; Provisional

Probab=97.86  E-value=6.2e-05  Score=77.34  Aligned_cols=76  Identities=34%  Similarity=0.454  Sum_probs=57.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-c--cccccccc---cc------CCCCceE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--ALSLADLE---NF------NPEDGMI  447 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~--~~~~~~~~---~~------~~~~~di  447 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.. .  ..++.+..   ++      ..+..|+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            467899999999 8999999999999999999999999988887766531 1  12222211   10      2357899


Q ss_pred             EEEcCCCCC
Q 009464          448 LANTTSIGM  456 (534)
Q Consensus       448 vVn~t~~g~  456 (534)
                      |||+++...
T Consensus       103 li~nAg~~~  111 (315)
T PRK06196        103 LINNAGVMA  111 (315)
T ss_pred             EEECCCCCC
Confidence            999998653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.84  E-value=5e-05  Score=76.44  Aligned_cols=74  Identities=16%  Similarity=0.239  Sum_probs=51.7

Q ss_pred             cCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCCHHHH---HHHHHHHcCcc---ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRA---RELAETVGGHA---LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~~~~a---~~la~~~~~~~---~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|++   |+|+++|.+|++.|++|++++|+.+..   +++.+.++...   .++.+   +.++      ..+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            578999999995   999999999999999999999986433   34433333211   12221   1110      346


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++|||+++.
T Consensus        85 ~iD~lVnnAG~~   96 (271)
T PRK06505         85 KLDFVVHAIGFS   96 (271)
T ss_pred             CCCEEEECCccC
Confidence            799999999875

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.84  E-value=4.4e-05  Score=76.08  Aligned_cols=75  Identities=25%  Similarity=0.287  Sum_probs=56.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----ccccccc---cc------C
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLADLE---NF------N  441 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~~~---~~------~  441 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..     ..    .++.+..   ++      .
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            567899999999 8999999999999999999999999888777665521     11    1221111   10      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|++||+++..
T Consensus        85 ~g~id~li~~Ag~~   98 (265)
T PRK07062         85 FGGVDMLVNNAGQG   98 (265)
T ss_pred             cCCCCEEEECCCCC
Confidence            45689999999875

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.84  E-value=4.5e-05  Score=75.51  Aligned_cols=75  Identities=25%  Similarity=0.282  Sum_probs=56.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----cccccc---ccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~---~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..   +.    .++.+.   .++      ..+
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            356899999999 8999999999999999999999999998888776531   11    122111   110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++..
T Consensus        83 ~id~li~~ag~~   94 (254)
T PRK07478         83 GLDIAFNNAGTL   94 (254)
T ss_pred             CCCEEEECCCCC
Confidence            789999999864

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.83  E-value=0.00023  Score=71.56  Aligned_cols=164  Identities=16%  Similarity=0.183  Sum_probs=105.7

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEe----c-
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRR----Q-  345 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~----~-  345 (534)
                      -+.++++|++.....++.    +++.+.++.+ .+.++.|+-|-+|+...+    |+    -+.+.+++.-.--    + 
T Consensus        53 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i----~~----~~i~~~I~p~KDVDGl~~~  124 (282)
T PRK14180         53 EKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHI----NK----NNVIYSIKPEKDVDGFHPT  124 (282)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCC----CH----HHHHhhcCccccccccChh
Confidence            457899999988877765    2566666666 467899999999974221    11    1122222222100    0 


Q ss_pred             cCCeE-EEE-----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          346 SDGKL-FGY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       346 ~~g~l-~G~-----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +-|++ .|.     -.--.|+++-|+..           +.+++||+++|+|.+ -.|+.++..|.+.|+.|+++.+...
T Consensus       125 n~g~l~~g~~~~~~PcTp~aii~lL~~y-----------~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~  193 (282)
T PRK14180        125 NVGRLQLRDKKCLESCTPKGIMTMLREY-----------GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT  193 (282)
T ss_pred             hHHHHhcCCCCCcCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC
Confidence            00111 121     11245666655532           357899999999995 7799999999999999999975322


Q ss_pred             HHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          419 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       419 ~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .   +              .+ ...++|+||.++|..   .    -+..++++++.+|+|+-.+.
T Consensus       194 d---l--------------~~-~~k~ADIvIsAvGkp---~----~i~~~~vk~gavVIDvGin~  233 (282)
T PRK14180        194 D---L--------------KS-HTTKADILIVAVGKP---N----FITADMVKEGAVVIDVGINH  233 (282)
T ss_pred             C---H--------------HH-HhhhcCEEEEccCCc---C----cCCHHHcCCCcEEEEecccc
Confidence            1   1              11 234589999988742   1    26778999999999997654

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.83  E-value=2.5e-05  Score=71.81  Aligned_cols=97  Identities=21%  Similarity=0.266  Sum_probs=68.3

Q ss_pred             ccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc----c---ccccccc--CCCCceEEEE
Q 009464          381 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL----S---LADLENF--NPEDGMILAN  450 (534)
Q Consensus       381 ~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~----~---~~~~~~~--~~~~~divVn  450 (534)
                      .+.|+.++++|+| |+|++++..|++.|++|+.+.|+++..+.|.++......    +   |+.+.+.  .....|.+||
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVN   83 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVN   83 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhc
Confidence            4678999999997 999999999999999999999999999999988754321    2   2222221  2345799999


Q ss_pred             cCCCCCCCCCCCCCCCccccCCCCEEEEEecC
Q 009464          451 TTSIGMQPKVDETPIPKHALGHYALVFDAVYT  482 (534)
Q Consensus       451 ~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~  482 (534)
                      ++++...     .||.+-.-+....-||++..
T Consensus        84 NAgvA~~-----~pf~eiT~q~fDr~F~VNvr  110 (245)
T KOG1207|consen   84 NAGVATN-----HPFGEITQQSFDRTFAVNVR  110 (245)
T ss_pred             cchhhhc-----chHHHHhHHhhcceeeeeee
Confidence            9988642     23322111223456677654

>PRK06182 short chain dehydrogenase; Validated

Probab=97.82  E-value=1.1e-05  Score=80.82  Aligned_cols=108  Identities=25%  Similarity=0.276  Sum_probs=66.8

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc------CCCCceEEEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILAN  450 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~------~~~~~divVn  450 (534)
                      ++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++... +...  .++.+   +.+.      ..+..|+|||
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASL-GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhC-CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3689999999 8999999999999999999999999887766532 1111  12221   1110      2357899999


Q ss_pred             cCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC
Q 009464          451 TTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG  496 (534)
Q Consensus       451 ~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G  496 (534)
                      +++.+...     ++..........++++++...   ...+++.+++.+
T Consensus        81 ~ag~~~~~-----~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~  124 (273)
T PRK06182         81 NAGYGSYG-----AIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR  124 (273)
T ss_pred             CCCcCCCC-----chhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC
Confidence            99875321     111111112233556665422   234555666554

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.80  E-value=4.1e-05  Score=89.28  Aligned_cols=126  Identities=17%  Similarity=0.228  Sum_probs=91.1

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCC-Ce-------------EEEEeCCHHHHHHHHHHH-cCcc--ccc---ccccccCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKG-AR-------------VVIANRTYDRARELAETV-GGHA--LSL---ADLENFNP  442 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G-~~-------------v~i~~R~~~~a~~la~~~-~~~~--~~~---~~~~~~~~  442 (534)
                      ..|+|+|+|+|.+|+.++..|++.. ++             |+|++++.++++++++.+ +...  .++   +++.+ ..
T Consensus       568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~-~v  646 (1042)
T PLN02819        568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLK-YV  646 (1042)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHH-hh
Confidence            4679999999999999999998753 24             999999999999999887 3222  222   23333 23


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHH-------HHHHHHHHHH
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLE-------MFIGQAYEQY  514 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~-------ml~~Qa~~qf  514 (534)
                      ..+|+||+++|...+.     ++....++.+.-++|..|... ...+.+.|+++|..++++..       |++.+.+.++
T Consensus       647 ~~~DaVIsalP~~~H~-----~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~~~Id~~  721 (1042)
T PLN02819        647 SQVDVVISLLPASCHA-----VVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMGLDPGIDHMMAMKMIDDA  721 (1042)
T ss_pred             cCCCEEEECCCchhhH-----HHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCccCHHHHHHHHHHHHHhh
Confidence            5699999999975432     244556667777889988755 44677788999988876543       6666666654

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.80  E-value=0.00067  Score=68.11  Aligned_cols=177  Identities=20%  Similarity=0.249  Sum_probs=112.9

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHH
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  332 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A  332 (534)
                      .-++| +|-+++--- .-.+..+++|++.....++-+    ++.+.++.+ .++++.|+-|-.|.-..+    |+    -
T Consensus        31 ii~vg~d~as~~Yv~-~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i----~~----~  101 (279)
T PRK14178         31 TVIVGDDPASQMYVR-MKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGV----DT----E  101 (279)
T ss_pred             EEEeCCChhHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCC----CH----H
Confidence            33455 444433332 335578999999888777653    566666666 577899999999964211    11    0


Q ss_pred             HHhcCeeEEEEeccCCeEEEEe-------------ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHH
Q 009464          333 KSIGAVNCIIRRQSDGKLFGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKA  398 (534)
Q Consensus       333 ~~iGAvNTi~~~~~~g~l~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~gra  398 (534)
                      +.+.+++.-.--  || ++-+|             ---.|+++-|+..           +.+++||+++|+|-+ -.||.
T Consensus       102 ~v~~~I~p~KDV--DG-l~~~n~g~l~~~~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~V~ViGrs~~vGrp  167 (279)
T PRK14178        102 RVIAAILPEKDV--DG-FHPLNLGRLVSGLPGFAPCTPNGIMTLLHEY-----------KISIAGKRAVVVGRSIDVGRP  167 (279)
T ss_pred             HHHhccCcccCc--cc-CChhhHHHHhCCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCccccHH
Confidence            111111111100  11 11111             1145666655431           357899999999997 88999


Q ss_pred             HHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEE
Q 009464          399 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  478 (534)
Q Consensus       399 ia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~D  478 (534)
                      ++..|...|+.|+++.++....++                  ....+|+||+++|..       .-+..++++++.+++|
T Consensus       168 la~lL~~~~atVtv~hs~t~~L~~------------------~~~~ADIvI~Avgk~-------~lv~~~~vk~GavVID  222 (279)
T PRK14178        168 MAALLLNADATVTICHSKTENLKA------------------ELRQADILVSAAGKA-------GFITPDMVKPGATVID  222 (279)
T ss_pred             HHHHHHhCCCeeEEEecChhHHHH------------------HHhhCCEEEECCCcc-------cccCHHHcCCCcEEEE
Confidence            999999999999999876532221                  224579999998632       1266788999999999


Q ss_pred             EecCC
Q 009464          479 AVYTP  483 (534)
Q Consensus       479 v~y~p  483 (534)
                      +..+.
T Consensus       223 Vgi~~  227 (279)
T PRK14178        223 VGINQ  227 (279)
T ss_pred             eeccc
Confidence            99774

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.78  E-value=0.00043  Score=69.47  Aligned_cols=161  Identities=20%  Similarity=0.176  Sum_probs=104.5

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEeccCCeE
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKL  350 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~~~g~l  350 (534)
                      .+.++++|++.....++-    +++.+.++.+ .+.++.|+-|-+|+...    +|+    -+.+.+++.-.--  || +
T Consensus        54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~----~~~----~~i~~~I~p~KDV--DG-l  122 (278)
T PRK14172         54 EKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKH----LDE----KKITNKIDANKDI--DC-L  122 (278)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCC----CCH----HHHHhccCccccc--Cc-c
Confidence            467899999998888774    2566666666 46689999999997421    111    1122222222100  11 1


Q ss_pred             EEEe-------------ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCC
Q 009464          351 FGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       351 ~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~  416 (534)
                      +=+|             ---.|+++-|+..           +.+++||+++|+|-+ -.|+.++.-|.+.|+.|+++.+.
T Consensus       123 ~~~n~g~l~~g~~~~~PcTp~av~~lL~~~-----------~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~  191 (278)
T PRK14172        123 TFISVGKFYKGEKCFLPCTPNSVITLIKSL-----------NIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK  191 (278)
T ss_pred             CHhhHHHHhCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC
Confidence            1111             1134555555431           357899999999995 77999999999999999999743


Q ss_pred             HHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          417 YDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       417 ~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      ....                 .+ ...++||||.++|..   .    -+..++++++.+|+|+=.++
T Consensus       192 T~~l-----------------~~-~~~~ADIvIsAvGkp---~----~i~~~~ik~gavVIDvGin~  233 (278)
T PRK14172        192 TKNL-----------------KE-VCKKADILVVAIGRP---K----FIDEEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             CCCH-----------------HH-HHhhCCEEEEcCCCc---C----ccCHHHcCCCcEEEEeeccc
Confidence            2211                 11 224579999988742   1    26788999999999995554

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.77  E-value=6.6e-05  Score=76.75  Aligned_cols=77  Identities=30%  Similarity=0.369  Sum_probs=56.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc-----Ccc----ccccccc---cc------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLADLE---NF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~~~----~~~~~~~---~~------  440 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.|+.+++++..+.+.     ...    .++.+..   ++      
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            3567899999999 999999999999999999999999988776655542     111    1222211   10      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|+|||+++...
T Consensus        92 ~~~~iD~li~nAg~~~  107 (306)
T PRK06197         92 AYPRIDLLINNAGVMY  107 (306)
T ss_pred             hCCCCCEEEECCcccc
Confidence            2356899999998653

>PLN02253 xanthoxin dehydrogenase

Probab=97.77  E-value=8.3e-05  Score=74.78  Aligned_cols=76  Identities=21%  Similarity=0.323  Sum_probs=56.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--cc----cccccc---ccc------CCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLADL---ENF------NPE  443 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~~~~---~~~------~~~  443 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.+..+++.+.+..  ..    .++.+.   .++      ..+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3467899999999 8999999999999999999999998888887776632  11    122211   110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||+++..
T Consensus        94 ~id~li~~Ag~~  105 (280)
T PLN02253         94 TLDIMVNNAGLT  105 (280)
T ss_pred             CCCEEEECCCcC
Confidence            689999999864

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=97.76  E-value=6.4e-05  Score=77.48  Aligned_cols=61  Identities=13%  Similarity=0.126  Sum_probs=47.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCccccccccc----ccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLE----NFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~~~----~~~~~~~divVn~t~  453 (534)
                      .++.+|+++|+|+|.||+.++++|.+.|+ +|+|+||+.+.     .       +++++.    + ....+|+||.||+
T Consensus       170 ~~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~-----~-------~~~~~~~~~~~-~~~~~DvVIs~t~  235 (338)
T PRK00676        170 QKSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLT-----L-------PYRTVVREELS-FQDPYDVIFFGSS  235 (338)
T ss_pred             CCccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccc-----c-------chhhhhhhhhh-cccCCCEEEEcCC
Confidence            35789999999999999999999999998 89999999753     1       111111    1 2346899999864

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.76  E-value=2e-05  Score=73.25  Aligned_cols=111  Identities=18%  Similarity=0.191  Sum_probs=68.8

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  464 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~  464 (534)
                      +++-++|.|-||++++..|.+.|++|+++||+.++++++.+.- ..  ..++..+ .....|+|+-+.+-...  ....-
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-~~--~~~s~~e-~~~~~dvvi~~v~~~~~--v~~v~   75 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-AE--VADSPAE-AAEQADVVILCVPDDDA--VEAVL   75 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-EE--EESSHHH-HHHHBSEEEE-SSSHHH--HHHHH
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-hh--hhhhhhh-HhhcccceEeecccchh--hhhhh
Confidence            4789999999999999999999999999999999999988762 11  1222222 12346999988763211  00000


Q ss_pred             CC---ccccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEec
Q 009464          465 IP---KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  501 (534)
Q Consensus       465 i~---~~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii~  501 (534)
                      ..   ...+.++.+++|+..... .+ .+.+..+++|+.+++
T Consensus        76 ~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vd  117 (163)
T PF03446_consen   76 FGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVD  117 (163)
T ss_dssp             HCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEE
T ss_pred             hhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeee
Confidence            11   234567889999997643 33 455556678876554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.76  E-value=0.00013  Score=67.24  Aligned_cols=97  Identities=28%  Similarity=0.262  Sum_probs=59.6

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||+++|+|-|-.|+.+|+.|...|++|+|+.+++-++-+...+ +.+..+++   + ....+|++|.+|+-..   
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~d-Gf~v~~~~---~-a~~~adi~vtaTG~~~---   90 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAMD-GFEVMTLE---E-ALRDADIFVTATGNKD---   90 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHT-T-EEE-HH---H-HTTT-SEEEE-SSSSS---
T ss_pred             eeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhc-CcEecCHH---H-HHhhCCEEEECCCCcc---
Confidence            56789999999999999999999999999999999999776443321 12333333   3 3457899999997321   


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCChhHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPKITRL  488 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~~T~l  488 (534)
                          .+..   ..++++.++.++-..+.+-.+
T Consensus        91 ----vi~~e~~~~mkdgail~n~Gh~d~Eid~  118 (162)
T PF00670_consen   91 ----VITGEHFRQMKDGAILANAGHFDVEIDV  118 (162)
T ss_dssp             ----SB-HHHHHHS-TTEEEEESSSSTTSBTH
T ss_pred             ----ccCHHHHHHhcCCeEEeccCcCceeEee
Confidence                1222   346777788777655554444

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.75  E-value=7.5e-05  Score=73.91  Aligned_cols=75  Identities=28%  Similarity=0.357  Sum_probs=56.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----cccccc---ccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~---~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..   ..    .++.+.   .++      ..+
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            467899999999 8999999999999999999999999988888776631   11    122211   110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||+++..
T Consensus        86 ~id~vi~~ag~~   97 (254)
T PRK08085         86 PIDVLINNAGIQ   97 (254)
T ss_pred             CCCEEEECCCcC
Confidence            689999999864

>PRK06720 hypothetical protein; Provisional

Probab=97.75  E-value=9e-05  Score=69.38  Aligned_cols=77  Identities=22%  Similarity=0.318  Sum_probs=56.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----cccc---ccccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLA---DLENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~---~~~~~------~~  442 (534)
                      ..+++|.++|+|+ ||+|++++..|.+.|++|++++|+.+.++++++++.   ...    .++.   ++.++      ..
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3467899999999 699999999999999999999999888777666552   111    1211   11110      24


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|++||+++...
T Consensus        92 G~iDilVnnAG~~~  105 (169)
T PRK06720         92 SRIDMLFQNAGLYK  105 (169)
T ss_pred             CCCCEEEECCCcCC
Confidence            67899999998653

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.75  E-value=7.7e-05  Score=74.91  Aligned_cols=77  Identities=29%  Similarity=0.352  Sum_probs=57.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..   ..    .++.+   +..+      ..
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999 8999999999999999999999999888888776531   11    12211   1110      23


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|++||+++...
T Consensus        86 g~id~li~~ag~~~   99 (278)
T PRK08277         86 GPCDILINGAGGNH   99 (278)
T ss_pred             CCCCEEEECCCCCC
Confidence            57899999998653

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.74  E-value=0.0005  Score=69.12  Aligned_cols=165  Identities=19%  Similarity=0.224  Sum_probs=105.6

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEe----c-
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRR----Q-  345 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~----~-  345 (534)
                      .+.++++|++.....++-    +++.+.++.+ .+.++.|+-|-+|+...+    |+    -+.+.+++--.--    + 
T Consensus        55 ~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i----~~----~~i~~~I~p~KDVDGl~~~  126 (284)
T PRK14177         55 VKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQI----DE----RAAFDRIALEKDVDGVTTL  126 (284)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCC----CH----HHHHhccCcccccccCChh
Confidence            567899999998877764    2566666666 467899999999975211    11    1111122111100    0 


Q ss_pred             cCCeE-EEE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          346 SDGKL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       346 ~~g~l-~G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      +-|++ .|.    -.--.|+++-|+..           +.++.||+++|+|-+ -.|+.++..|.+.|+.|+++......
T Consensus       127 n~g~l~~g~~~~~PcTp~avi~ll~~y-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~  195 (284)
T PRK14177        127 SFGKLSMGVETYLPCTPYGMVLLLKEY-----------GIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQN  195 (284)
T ss_pred             hHHHHHcCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC
Confidence            00111 111    11245666655532           357899999999995 77999999999999999998743221


Q ss_pred             HHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC
Q 009464          420 ARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK  484 (534)
Q Consensus       420 a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~  484 (534)
                      .                 .+ ...++||||.++|..   .    -+..++++++.+|+|+-.+..
T Consensus       196 l-----------------~~-~~~~ADIvIsAvGk~---~----~i~~~~ik~gavVIDvGin~~  235 (284)
T PRK14177        196 L-----------------PS-IVRQADIIVGAVGKP---E----FIKADWISEGAVLLDAGYNPG  235 (284)
T ss_pred             H-----------------HH-HHhhCCEEEEeCCCc---C----ccCHHHcCCCCEEEEecCccc
Confidence            1                 11 224579999887642   1    267889999999999987643

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.74  E-value=0.00011  Score=73.34  Aligned_cols=76  Identities=22%  Similarity=0.215  Sum_probs=53.5

Q ss_pred             cccCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHHHcCc-c--ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDR---ARELAETVGGH-A--LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~~~~---a~~la~~~~~~-~--~~~~~---~~~~------~  441 (534)
                      .++++|+++|+|++   |+|+++++.|++.|++|++++|+.+.   +++++++++.. .  +++.+   +.++      .
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence            45789999999984   89999999999999999999998543   45555554321 1  12211   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|++|||++..
T Consensus        86 ~g~ld~lv~nAg~~   99 (258)
T PRK07533         86 WGRLDFLLHSIAFA   99 (258)
T ss_pred             cCCCCEEEEcCccC
Confidence            46789999999864

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.74  E-value=8.8e-05  Score=70.42  Aligned_cols=75  Identities=21%  Similarity=0.232  Sum_probs=59.0

Q ss_pred             CCcEEEEEcC--chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc--ccc----------cccccCCCCceEE
Q 009464          383 AGKLFVVIGA--GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SLA----------DLENFNPEDGMIL  448 (534)
Q Consensus       383 ~~k~vlVlGa--GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~--~~~----------~~~~~~~~~~div  448 (534)
                      ..|.++|+|.  ||+|-+++..+++.|+.|+.+.|..++..+|+.+++-...  +..          ++.++..+..|++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            3588999998  9999999999999999999999999999999988764321  111          1111145678999


Q ss_pred             EEcCCCCCC
Q 009464          449 ANTTSIGMQ  457 (534)
Q Consensus       449 Vn~t~~g~~  457 (534)
                      +|++|..+.
T Consensus        86 ~NNAG~~C~   94 (289)
T KOG1209|consen   86 YNNAGQSCT   94 (289)
T ss_pred             EcCCCCCcc
Confidence            999998764

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.74  E-value=4e-05  Score=76.06  Aligned_cols=75  Identities=25%  Similarity=0.266  Sum_probs=51.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccc---cccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~~~~~~~~~~divVn~t~  453 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.....+.........  .++.   ++.+ ..+..|++||+++
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~iDilVnnAG   88 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDK-QLASLDVLILNHG   88 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHH-hcCCCCEEEECCc
Confidence            3567899999999 899999999999999999999998632211111111111  1222   2223 3567999999998


Q ss_pred             CC
Q 009464          454 IG  455 (534)
Q Consensus       454 ~g  455 (534)
                      .+
T Consensus        89 ~~   90 (245)
T PRK12367         89 IN   90 (245)
T ss_pred             cC
Confidence            64

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.74  E-value=7.3e-05  Score=77.68  Aligned_cols=76  Identities=25%  Similarity=0.365  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.   .+.    .++.+   +.++      ..+
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            456899999999 899999999999999999999999998888877653   111    12221   1110      245


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|++||+++...
T Consensus        85 ~iD~lInnAg~~~   97 (334)
T PRK07109         85 PIDTWVNNAMVTV   97 (334)
T ss_pred             CCCEEEECCCcCC
Confidence            7899999998653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.72  E-value=8e-05  Score=73.18  Aligned_cols=74  Identities=34%  Similarity=0.469  Sum_probs=55.1

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc--Cc----cccccc---cccc------CCCCc
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GH----ALSLAD---LENF------NPEDG  445 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~--~~----~~~~~~---~~~~------~~~~~  445 (534)
                      +++++++|+|+ |++|++++..|.+.|++|++++|+.++.+++...+.  ..    ..++.+   +..+      ..+.+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            56789999999 899999999999999999999999998888776654  11    112211   1110      23468


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+||++++..
T Consensus        83 d~vi~~ag~~   92 (251)
T PRK07231         83 DILVNNAGTT   92 (251)
T ss_pred             CEEEECCCCC
Confidence            9999999763

>PRK06194 hypothetical protein; Provisional

Probab=97.72  E-value=7.7e-05  Score=75.23  Aligned_cols=75  Identities=27%  Similarity=0.371  Sum_probs=55.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~~  444 (534)
                      +++|++||+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..   +.    .++.+   +.++      ..+.
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999 8999999999999999999999998888777766531   11    12211   1110      2346


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||+++...
T Consensus        84 id~vi~~Ag~~~   95 (287)
T PRK06194         84 VHLLFNNAGVGA   95 (287)
T ss_pred             CCEEEECCCCCC
Confidence            799999998753

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.70  E-value=0.00041  Score=69.94  Aligned_cols=164  Identities=18%  Similarity=0.220  Sum_probs=104.4

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEec-----
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----  345 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~-----  345 (534)
                      -+.++++|++.....++-    +++.+.++.+ .+.++.|+-|-+|+-.    ++|+    -+.+.+++.-.--.     
T Consensus        51 ~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~----~i~~----~~i~~~I~p~KDVDGl~~~  122 (287)
T PRK14173         51 DRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPP----HIDF----QRVLEAIDPLKDVDGFHPL  122 (287)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH----HHHHhccCccccccccChh
Confidence            457899999998887764    3566667666 4668999999999742    1111    01222222211000     


Q ss_pred             cCCeEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          346 SDGKLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       346 ~~g~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      +-|+++ |.    -.--.|+++-|+..           +.++.||+++|+|.+ -+|+.++..|.+.|+.|+++.+....
T Consensus       123 N~g~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~  191 (287)
T PRK14173        123 NVGRLWMGGEALEPCTPAGVVRLLKHY-----------GIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD  191 (287)
T ss_pred             hhHHHhcCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC
Confidence            001111 10    11134555555431           357899999999995 78999999999999999998653221


Q ss_pred             HHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          420 ARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       420 a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .                 .+ ...++||||.++|..   .    -+..++++++.+|+|+-.+.
T Consensus       192 l-----------------~~-~~~~ADIvIsAvGkp---~----~i~~~~vk~GavVIDVGin~  230 (287)
T PRK14173        192 L-----------------PA-VTRRADVLVVAVGRP---H----LITPEMVRPGAVVVDVGINR  230 (287)
T ss_pred             H-----------------HH-HHhhCCEEEEecCCc---C----ccCHHHcCCCCEEEEccCcc
Confidence            1                 11 224589999988743   1    25678999999999998664

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.69  E-value=0.0008  Score=67.60  Aligned_cols=168  Identities=18%  Similarity=0.217  Sum_probs=105.0

Q ss_pred             HHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHh--hcccccCHHHHHhcCeeEEEEeccC
Q 009464          275 YNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDTVAKSIGAVNCIIRRQSD  347 (534)
Q Consensus       275 hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~--~~ld~~~~~A~~iGAvNTi~~~~~~  347 (534)
                      -.+.++++|++..-..++-    +++.+.++.+ .++++.|+-|-.|+...+-  ..++.+++ -+.+-..+.+-    -
T Consensus        52 k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p-~KDVDGl~~~n----~  126 (281)
T PRK14183         52 KAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDP-KKDVDGFHPYN----V  126 (281)
T ss_pred             HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCc-hhcccccChhh----h
Confidence            3557899999987666654    2566666666 4678999999999752111  11111111 01111111100    0


Q ss_pred             CeE-EEEe----ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHH
Q 009464          348 GKL-FGYN----TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRAR  421 (534)
Q Consensus       348 g~l-~G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~  421 (534)
                      |++ .|.+    ---.|++.-|+..           +.+++||+++|+|.| -.|+.++..|.++|+.|+++.....   
T Consensus       127 g~l~~g~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~---  192 (281)
T PRK14183        127 GRLVTGLDGFVPCTPLGVMELLEEY-----------EIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTK---  192 (281)
T ss_pred             hHHhcCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCc---
Confidence            111 1100    1145666655432           367899999999996 8899999999999999999864322   


Q ss_pred             HHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          422 ELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       422 ~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .+.              + ...++|+||.++|..       .-+..++++++.+|+|+-.+.
T Consensus       193 ~l~--------------~-~~~~ADIvV~AvGkp-------~~i~~~~vk~gavvIDvGin~  232 (281)
T PRK14183        193 DLK--------------A-HTKKADIVIVGVGKP-------NLITEDMVKEGAIVIDIGINR  232 (281)
T ss_pred             CHH--------------H-HHhhCCEEEEecCcc-------cccCHHHcCCCcEEEEeeccc
Confidence            111              1 234589999988642       136788999999999998665

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.69  E-value=0.00012  Score=73.66  Aligned_cols=75  Identities=17%  Similarity=0.271  Sum_probs=53.6

Q ss_pred             ccCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHcCcc---ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGHA---LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~~---~~~~~---~~~~------~~  442 (534)
                      .+++|+++|+|+   +|+|+++|+.|++.|++|++..|+.   +++++++++++...   .++.+   +.++      ..
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            457899999998   5999999999999999999988873   55666666654211   12211   1110      34


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++||++++.
T Consensus        87 g~iD~lv~nAG~~   99 (272)
T PRK08159         87 GKLDFVVHAIGFS   99 (272)
T ss_pred             CCCcEEEECCccc
Confidence            6789999999865

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.69  E-value=5.8e-05  Score=77.78  Aligned_cols=74  Identities=24%  Similarity=0.298  Sum_probs=55.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~~  444 (534)
                      .++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..   ..    .++.+..   ++      ....
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            45789999999 8999999999999999999999999999888777631   11    1222211   10      1235


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+|||++++.
T Consensus        84 iD~li~nAg~~   94 (322)
T PRK07453         84 LDALVCNAAVY   94 (322)
T ss_pred             ccEEEECCccc
Confidence            89999999864

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.69  E-value=0.00061  Score=68.67  Aligned_cols=164  Identities=19%  Similarity=0.255  Sum_probs=104.8

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEe----c-
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRR----Q-  345 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~----~-  345 (534)
                      -+.++++|++.....++.    +++.+.++.+ .++++.|+-|-+|+...    +|+    -+.+.+++.-.--    + 
T Consensus        54 ~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~----id~----~~i~~~I~p~KDVDGl~~~  125 (288)
T PRK14171         54 IKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSS----IDK----NKILSAVSPSKDIDGFHPL  125 (288)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCC----CCH----HHHHhccCcccccccCCcc
Confidence            557899999988877764    2455666666 46789999999997531    111    1122222222100    0 


Q ss_pred             cCCeEE-EE-----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          346 SDGKLF-GY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       346 ~~g~l~-G~-----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +-|++. |.     ----.|+++-|+..           +.++.||+++|+|-+ -.|+.++.-|.+.|+.|+++.....
T Consensus       126 N~g~l~~g~~~~~~PcTp~av~~lL~~y-----------~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~  194 (288)
T PRK14171        126 NVGYLHSGISQGFIPCTALGCLAVIKKY-----------EPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTH  194 (288)
T ss_pred             chhhhhcCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC
Confidence            012221 11     01134555555432           357899999999995 7799999999999999999873221


Q ss_pred             HHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          419 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       419 ~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .   +              .+ ...++||||.++|..   .    -+..++++++.+|+|+-.+.
T Consensus       195 ~---L--------------~~-~~~~ADIvV~AvGkp---~----~i~~~~vk~GavVIDvGin~  234 (288)
T PRK14171        195 N---L--------------SS-ITSKADIVVAAIGSP---L----KLTAEYFNPESIVIDVGINR  234 (288)
T ss_pred             C---H--------------HH-HHhhCCEEEEccCCC---C----ccCHHHcCCCCEEEEeeccc
Confidence            1   1              11 224589999988742   1    36778999999999998775

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.68  E-value=0.00042  Score=69.63  Aligned_cols=199  Identities=20%  Similarity=0.223  Sum_probs=122.8

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEec-----
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ-----  345 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~-----  345 (534)
                      .+.++++|++.....++-    +++.+.++.+ .++++.|+-|-.|....    +|+    -+.+.+++.-.--.     
T Consensus        52 ~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~----i~~----~~i~~~I~p~KDVDGl~~~  123 (282)
T PRK14182         52 RKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKH----VDE----RAVLDAISPAKDADGFHPF  123 (282)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCC----CCH----HHHHhccCcccCcCCCCHh
Confidence            557899999998887764    2566666666 46789999999997521    111    11222222221000     


Q ss_pred             cCCeEE-EE-----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          346 SDGKLF-GY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       346 ~~g~l~-G~-----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +-|+++ |.     -.--.|+++-|+..           +.+++||+++|+|-+ -.|+.++.-|.++|+.|+++.....
T Consensus       124 n~g~l~~g~~~~~~PcTp~avi~ll~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~  192 (282)
T PRK14182        124 NVGALSIGIAGVPRPCTPAGVMRMLDEA-----------RVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTA  192 (282)
T ss_pred             HHHHHhCCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC
Confidence            001111 10     11245666665532           357899999999995 7799999999999999999865322


Q ss_pred             HHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC-------hhHHHHH
Q 009464          419 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK-------ITRLLRE  491 (534)
Q Consensus       419 ~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~-------~T~ll~~  491 (534)
                      .   +              .+ ...++||||.++|.   |.    .+..++++++.+|+|+-.+..       +-.|-..
T Consensus       193 n---l--------------~~-~~~~ADIvI~AvGk---~~----~i~~~~ik~gaiVIDvGin~~~~gkl~GDVd~~~v  247 (282)
T PRK14182        193 D---L--------------AG-EVGRADILVAAIGK---AE----LVKGAWVKEGAVVIDVGMNRLADGKLVGDVEFAAA  247 (282)
T ss_pred             C---H--------------HH-HHhhCCEEEEecCC---cC----ccCHHHcCCCCEEEEeeceecCCCCeeCCCCHHHH
Confidence            1   1              11 22458999998874   22    367889999999999987652       1122222


Q ss_pred             HHHCCC-eEec-c-----HHHHHHHHHHHHHHhc
Q 009464          492 AEESGA-TIVS-G-----LEMFIGQAYEQYERFT  518 (534)
Q Consensus       492 A~~~G~-~ii~-G-----l~ml~~Qa~~qf~lwt  518 (534)
                      ....++ .-++ |     ..||..+.+.+.+.|.
T Consensus       248 ~~~a~~iTPVPGGVGp~T~a~L~~N~~~~~~~~~  281 (282)
T PRK14182        248 AARASAITPVPGGVGPMTRAMLLVNTVELAKRTA  281 (282)
T ss_pred             HhhccEecCCCCCChHHHHHHHHHHHHHHHHHhc
Confidence            222332 2233 2     4788888887776664

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.68  E-value=5.5e-05  Score=71.39  Aligned_cols=111  Identities=23%  Similarity=0.224  Sum_probs=71.6

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      ...+.|+++.|+|.|.+|+++|..|...|++|+.++|+....... ......   ..++++ .+..+|+|+++.|...  
T Consensus        31 ~~~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~---~~~l~e-ll~~aDiv~~~~plt~--  103 (178)
T PF02826_consen   31 GRELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVE---YVSLDE-LLAQADIVSLHLPLTP--  103 (178)
T ss_dssp             BS-STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEE---ESSHHH-HHHH-SEEEE-SSSST--
T ss_pred             ccccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-ccccce---eeehhh-hcchhhhhhhhhcccc--
Confidence            467899999999999999999999999999999999998765412 222222   223333 3346899999998652  


Q ss_pred             CCCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHCCC
Q 009464          459 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGA  497 (534)
Q Consensus       459 ~~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~  497 (534)
                      . ...-+..+   .++++.+++++.-.+. +..-+..|.+.|.
T Consensus       104 ~-T~~li~~~~l~~mk~ga~lvN~aRG~~vde~aL~~aL~~g~  145 (178)
T PF02826_consen  104 E-TRGLINAEFLAKMKPGAVLVNVARGELVDEDALLDALESGK  145 (178)
T ss_dssp             T-TTTSBSHHHHHTSTTTEEEEESSSGGGB-HHHHHHHHHTTS
T ss_pred             c-cceeeeeeeeeccccceEEEeccchhhhhhhHHHHHHhhcc
Confidence            2 22235544   3567778888775543 4445556666654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00011  Score=72.08  Aligned_cols=74  Identities=23%  Similarity=0.250  Sum_probs=56.0

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccccc---cc------CCCCceE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADLE---NF------NPEDGMI  447 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~~~---~~------~~~~~di  447 (534)
                      +++|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.++++...    .++.+..   .+      ..+..|+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46789999999 899999999999999999999999888888777765332    1221111   10      2356899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      +||+++..
T Consensus        84 vi~~ag~~   91 (249)
T PRK06500         84 VFINAGVA   91 (249)
T ss_pred             EEECCCCC
Confidence            99999764

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00013  Score=72.05  Aligned_cols=76  Identities=30%  Similarity=0.453  Sum_probs=57.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---c--c--ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H--A--LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~--~--~~~~~---~~~~------~~  442 (534)
                      .++.+|+++|+|+ ||+|++++..|++.|++|+++.|+.++++++.+.+..   .  .  .++.+   +.++      ..
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4577899999999 8999999999999999999999999998888776531   1  1  11111   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++||+++..
T Consensus        85 ~~~d~li~~ag~~   97 (258)
T PRK06949         85 GTIDILVNNSGVS   97 (258)
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999864

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00012  Score=72.53  Aligned_cols=75  Identities=29%  Similarity=0.402  Sum_probs=56.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc------CCCCceEE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMIL  448 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~------~~~~~div  448 (534)
                      .+++|+++|+|+ ||+|++++..|+++|++|++++|+.++.+++.+.+....  .++.+   +.++      ..+..|++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            367899999999 999999999999999999999999988877776654322  12211   1110      23468999


Q ss_pred             EEcCCCC
Q 009464          449 ANTTSIG  455 (534)
Q Consensus       449 Vn~t~~g  455 (534)
                      ||+++..
T Consensus        84 i~~ag~~   90 (255)
T PRK06057         84 FNNAGIS   90 (255)
T ss_pred             EECCCcC
Confidence            9998754

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.67  E-value=8.8e-05  Score=76.08  Aligned_cols=74  Identities=31%  Similarity=0.386  Sum_probs=52.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH----------HHHHHHHHHHc---Ccc----ccccc---ccc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY----------DRARELAETVG---GHA----LSLAD---LEN  439 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~----------~~a~~la~~~~---~~~----~~~~~---~~~  439 (534)
                      ++++|+++|+|+ +|+|++++.+|++.|++|++++|+.          ++++++++.+.   ...    +++.+   +.+
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            467899999999 7999999999999999999999973          45555555442   111    12211   111


Q ss_pred             c------CCCCceEEEEcC-CC
Q 009464          440 F------NPEDGMILANTT-SI  454 (534)
Q Consensus       440 ~------~~~~~divVn~t-~~  454 (534)
                      +      ..+..|++||++ +.
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~  106 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGG  106 (305)
T ss_pred             HHHHHHHHcCCccEEEECCccc
Confidence            0      246789999998 64

>PRK09242 tropinone reductase; Provisional

Probab=97.66  E-value=0.00013  Score=72.39  Aligned_cols=75  Identities=25%  Similarity=0.312  Sum_probs=57.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----ccccc----------ccc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD----------LEN  439 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~----------~~~  439 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..     +.    +++.+          +.+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3567899999999 8999999999999999999999999988888766531     11    12211          111


Q ss_pred             cCCCCceEEEEcCCCC
Q 009464          440 FNPEDGMILANTTSIG  455 (534)
Q Consensus       440 ~~~~~~divVn~t~~g  455 (534)
                       ..+..|+|||+++..
T Consensus        85 -~~g~id~li~~ag~~   99 (257)
T PRK09242         85 -HWDGLHILVNNAGGN   99 (257)
T ss_pred             -HcCCCCEEEECCCCC
Confidence             245789999999864

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.00013  Score=72.80  Aligned_cols=76  Identities=34%  Similarity=0.346  Sum_probs=56.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccccc---------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLENF---------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~~~---------~~~  443 (534)
                      ++++++++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+.+..   ..    .++.+..+.         ..+
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999999 7999999999999999999999999888887766531   11    122111110         235


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||+++...
T Consensus        87 ~id~vi~~Ag~~~   99 (263)
T PRK07814         87 RLDIVVNNVGGTM   99 (263)
T ss_pred             CCCEEEECCCCCC
Confidence            7899999998643

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.66  E-value=0.00011  Score=73.18  Aligned_cols=75  Identities=20%  Similarity=0.248  Sum_probs=54.0

Q ss_pred             ccCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCH--HHHHHHHHHHcCcc----ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY--DRARELAETVGGHA----LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~--~~a~~la~~~~~~~----~~~~~---~~~~------~~  442 (534)
                      .+++|+++|+|+   +|+|++++..|++.|++|++.+|+.  +..++++++++...    +++.+   +.++      ..
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            357899999996   6999999999999999999998764  55667766654221    12211   1110      24


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++||++++.
T Consensus        84 g~iD~li~nAG~~   96 (256)
T PRK07889         84 DGLDGVVHSIGFA   96 (256)
T ss_pred             CCCcEEEEccccc
Confidence            6799999999875

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=97.65  E-value=0.0014  Score=65.32  Aligned_cols=217  Identities=19%  Similarity=0.228  Sum_probs=134.3

Q ss_pred             EEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchH-----HHHhhccccc
Q 009464          259 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHK-----EAAVKCCDEV  328 (534)
Q Consensus       259 ~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~ld~~  328 (534)
                      .-++|+.-+....=.+-.+..++.|+...+..++.    +++...++.+ .++++.|.-|-.|.=     +.++..++--
T Consensus        35 vilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p~  114 (283)
T COG0190          35 VILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLDEQKLLQAIDPE  114 (283)
T ss_pred             EEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCcC
Confidence            34566544433344566788999999988888764    3566666666 578999999999963     3333332210


Q ss_pred             CHHHHHhcCeeEEEEeccCCeEE-E---E-eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHH
Q 009464          329 DTVAKSIGAVNCIIRRQSDGKLF-G---Y-NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYG  402 (534)
Q Consensus       329 ~~~A~~iGAvNTi~~~~~~g~l~-G---~-NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~  402 (534)
                       ..+.-..-.|       -|+|. |   + -.--.|++.-|+..           +.++.||+++|+|.| =.||.++..
T Consensus       115 -KDVDG~hp~N-------~g~L~~~~~~~~PCTp~gi~~ll~~~-----------~i~l~Gk~~vVVGrS~iVGkPla~l  175 (283)
T COG0190         115 -KDVDGFHPYN-------LGKLAQGEPGFLPCTPAGIMTLLEEY-----------GIDLRGKNVVVVGRSNIVGKPLALL  175 (283)
T ss_pred             -CCccccChhH-------hcchhcCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcCcHHHHHH
Confidence             0000001111       12333 2   0 11256888877652           368899999999997 669999999


Q ss_pred             HHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecC
Q 009464          403 AKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT  482 (534)
Q Consensus       403 L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~  482 (534)
                      |...++.|+++......   +              .+ ...++||+|.++|..   +    -+..++++++.+|+|+=.+
T Consensus       176 L~~~naTVtvcHs~T~~---l--------------~~-~~k~ADIvv~AvG~p---~----~i~~d~vk~gavVIDVGin  230 (283)
T COG0190         176 LLNANATVTVCHSRTKD---L--------------AS-ITKNADIVVVAVGKP---H----FIKADMVKPGAVVIDVGIN  230 (283)
T ss_pred             HHhCCCEEEEEcCCCCC---H--------------HH-HhhhCCEEEEecCCc---c----ccccccccCCCEEEecCCc
Confidence            99999999999754321   1              11 234589999988742   1    2557888888999998655


Q ss_pred             CCh-------hHHHHHHHHCCC-eEecc------HHHHHHHHHHHHHHhcC
Q 009464          483 PKI-------TRLLREAEESGA-TIVSG------LEMFIGQAYEQYERFTG  519 (534)
Q Consensus       483 p~~-------T~ll~~A~~~G~-~ii~G------l~ml~~Qa~~qf~lwtg  519 (534)
                      ...       -.|-...+..++ .-++|      ..||+..-...++...+
T Consensus       231 rv~~~kl~GDVdf~~v~~~a~~iTPVPGGVGPmTvamLl~Nt~~a~~~~~~  281 (283)
T COG0190         231 RVNDGKLVGDVDFDSVKEKASAITPVPGGVGPMTVAMLLENTLKAAERQRG  281 (283)
T ss_pred             cccCCceEeeccHHHHHHhhcccCCCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence            332       233333333333 33553      36777777776665443

>PRK09186 flagellin modification protein A; Provisional

Probab=97.65  E-value=0.00012  Score=72.41  Aligned_cols=46  Identities=33%  Similarity=0.444  Sum_probs=41.6

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  427 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~  427 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   48 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESL   48 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHH
Confidence            35789999999 89999999999999999999999999988877665

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.65  E-value=0.0001  Score=73.30  Aligned_cols=75  Identities=21%  Similarity=0.396  Sum_probs=53.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHHc----Ccc----ccccc---cccc------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG----GHA----LSLAD---LENF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~~----~~~----~~~~~---~~~~------  440 (534)
                      ..+++|+++|+|+ +|+|++++..|++.|++|+++. |+.++++++++.+.    .+.    +++.+   +.++      
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3567899999999 8999999999999999998875 56777776665542    111    12222   1110      


Q ss_pred             CCCCceEEEEcCCC
Q 009464          441 NPEDGMILANTTSI  454 (534)
Q Consensus       441 ~~~~~divVn~t~~  454 (534)
                      ..+..|++||+++.
T Consensus        84 ~~g~id~lv~nAg~   97 (260)
T PRK08416         84 DFDRVDFFISNAII   97 (260)
T ss_pred             hcCCccEEEECccc
Confidence            24578999999975

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00011  Score=74.45  Aligned_cols=74  Identities=32%  Similarity=0.451  Sum_probs=54.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH---------HHHHHHHHHHcC---cc----ccccc---cccc-
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY---------DRARELAETVGG---HA----LSLAD---LENF-  440 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~---------~~a~~la~~~~~---~~----~~~~~---~~~~-  440 (534)
                      +++|+++|+|+ +|+|++++..|++.|++|++++|+.         ++++++++++..   ..    .++.+   +.++ 
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            56899999999 8999999999999999999998875         667777666531   11    12221   1110 


Q ss_pred             -----CCCCceEEEEcCCCC
Q 009464          441 -----NPEDGMILANTTSIG  455 (534)
Q Consensus       441 -----~~~~~divVn~t~~g  455 (534)
                           ..+..|++||++++.
T Consensus        84 ~~~~~~~g~id~lv~nAG~~  103 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGIL  103 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence                 246789999999875

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.65  E-value=7.5e-05  Score=79.43  Aligned_cols=74  Identities=27%  Similarity=0.266  Sum_probs=53.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc--c--ccccc---ccccCCCCceEEEEcC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--A--LSLAD---LENFNPEDGMILANTT  452 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~--~~~~~---~~~~~~~~~divVn~t  452 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++........  .  .++.+   +.+ ..++.|++||++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~-~l~~IDiLInnA  253 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAE-LLEKVDILIINH  253 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH-HhCCCCEEEECC
Confidence            456899999999 89999999999999999999999887665433221111  1  12222   222 346789999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      ++.
T Consensus       254 Gi~  256 (406)
T PRK07424        254 GIN  256 (406)
T ss_pred             CcC
Confidence            865

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.65  E-value=0.00077  Score=67.83  Aligned_cols=182  Identities=19%  Similarity=0.247  Sum_probs=111.7

Q ss_pred             EEecCC-CccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHHh--hcccccCH
Q 009464          259 FGIIGK-PVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDT  330 (534)
Q Consensus       259 ~~liG~-pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v~--~~ld~~~~  330 (534)
                      .-++|+ |-+++-- ..-.+.++++|++.....++-+    ++...++.+ .+.++.|+-|-.|+...+-  ..++.+++
T Consensus        35 ii~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p  113 (282)
T PRK14169         35 VVLVGSDPASEVYV-RNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDP  113 (282)
T ss_pred             EEEeCCChhHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCc
Confidence            345563 3333222 3445678999999988877753    566666666 4678999999999753221  11111111


Q ss_pred             HHHHhcCeeEEEEeccCCeEE-E----EeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHH
Q 009464          331 VAKSIGAVNCIIRRQSDGKLF-G----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAK  404 (534)
Q Consensus       331 ~A~~iGAvNTi~~~~~~g~l~-G----~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~  404 (534)
                       .+.+-..+..-    -|+++ |    .----.|+++-|+..           +.++.||+++|+|-+ -.|+.++.-|.
T Consensus       114 -~KDVDGl~~~N----~g~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~  177 (282)
T PRK14169        114 -DKDVDGFSPVS----VGRLWANEPTVVASTPYGIMALLDAY-----------DIDVAGKRVVIVGRSNIVGRPLAGLMV  177 (282)
T ss_pred             -ccCcccCChhh----hHHHhcCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHH
Confidence             01111111100    01111 0    011145666655432           357899999999995 77999999999


Q ss_pred             HCCCeEEEEe-CCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          405 AKGARVVIAN-RTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       405 ~~G~~v~i~~-R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      +.|+.|+++. ||.+    +              .+ ...++||||.++|..   .    -+..++++++.+|+|+-.+.
T Consensus       178 ~~~atVtichs~T~~----l--------------~~-~~~~ADIvI~AvG~p---~----~i~~~~vk~GavVIDvGin~  231 (282)
T PRK14169        178 NHDATVTIAHSKTRN----L--------------KQ-LTKEADILVVAVGVP---H----FIGADAVKPGAVVIDVGISR  231 (282)
T ss_pred             HCCCEEEEECCCCCC----H--------------HH-HHhhCCEEEEccCCc---C----ccCHHHcCCCcEEEEeeccc
Confidence            9999999995 4422    1              11 223579999988743   1    26778999999999998775

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.64  E-value=0.00014  Score=72.07  Aligned_cols=74  Identities=36%  Similarity=0.419  Sum_probs=56.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~di  447 (534)
                      +.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+....    .++.+   +.++      ..+..|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56789999999 899999999999999999999999999888877764321    12211   1110      2356899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      +||+++..
T Consensus        84 li~~ag~~   91 (257)
T PRK07067         84 LFNNAALF   91 (257)
T ss_pred             EEECCCcC
Confidence            99998764

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.64  E-value=0.0009  Score=67.65  Aligned_cols=180  Identities=17%  Similarity=0.184  Sum_probs=110.5

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHH
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  332 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A  332 (534)
                      .-++| +|-+++-- ..-.+.++++|++.....++-    +++.+.++.+ .++.+.|+-|-.|+..    ++|+    -
T Consensus        37 iI~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~----~i~~----~  107 (294)
T PRK14187         37 VILVGDDPASQLYV-RNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPN----HIDK----N  107 (294)
T ss_pred             EEEeCCChhHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH----H
Confidence            34556 34333322 233567899999998877764    2465666666 4678999999999752    1111    0


Q ss_pred             HHhcCeeEEEEe----c-cCCeEE-EEe------ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHH
Q 009464          333 KSIGAVNCIIRR----Q-SDGKLF-GYN------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKAL  399 (534)
Q Consensus       333 ~~iGAvNTi~~~----~-~~g~l~-G~N------TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~grai  399 (534)
                      +.+.+++.-.--    + +-|++. |.+      ---.|++.-|+..           +.++.||+++|+|.+ -.|+.+
T Consensus       108 ~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPl  176 (294)
T PRK14187        108 LIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTI-----------TRNLSGSDAVVIGRSNIVGKPM  176 (294)
T ss_pred             HHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHH
Confidence            111112111100    0 001111 111      1245666655432           357899999999995 779999


Q ss_pred             HHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEE
Q 009464          400 AYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  479 (534)
Q Consensus       400 a~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv  479 (534)
                      +..|.++|+.|+++.......                 .+ ...++||||.++|..   .    -+..++++++.+|+|+
T Consensus       177 a~lL~~~~aTVt~chs~T~~l-----------------~~-~~~~ADIvVsAvGkp---~----~i~~~~ik~gaiVIDV  231 (294)
T PRK14187        177 ACLLLGENCTVTTVHSATRDL-----------------AD-YCSKADILVAAVGIP---N----FVKYSWIKKGAIVIDV  231 (294)
T ss_pred             HHHHhhCCCEEEEeCCCCCCH-----------------HH-HHhhCCEEEEccCCc---C----ccCHHHcCCCCEEEEe
Confidence            999999999999987532211                 11 234589999988742   1    2678899999999999


Q ss_pred             ecCC
Q 009464          480 VYTP  483 (534)
Q Consensus       480 ~y~p  483 (534)
                      =.++
T Consensus       232 Gin~  235 (294)
T PRK14187        232 GINS  235 (294)
T ss_pred             cccc
Confidence            6553

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.64  E-value=7.5e-05  Score=68.69  Aligned_cols=72  Identities=29%  Similarity=0.404  Sum_probs=53.1

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCC--HHHHHHHHHHHc---Ccc----ccccc---cccc------CCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRT--YDRARELAETVG---GHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~--~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~  444 (534)
                      |+++|+|+ ||+|++++.+|++.|. +|+++.|+  .++.+++.+++.   ...    .++.+   +.++      ....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            68999999 8999999999999987 89999999  788888877764   111    11111   1110      2357


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|++||+++...
T Consensus        81 ld~li~~ag~~~   92 (167)
T PF00106_consen   81 LDILINNAGIFS   92 (167)
T ss_dssp             ESEEEEECSCTT
T ss_pred             cccccccccccc
Confidence            899999998753

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00017  Score=70.60  Aligned_cols=77  Identities=31%  Similarity=0.335  Sum_probs=58.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccccc---ccc--CCCCceEEEEc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADL---ENF--NPEDGMILANT  451 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~~---~~~--~~~~~divVn~  451 (534)
                      .++++++++|+|+ |++|+.++..|++.|++|++++|+.++++++.+..+...  .++.+.   .+.  .....|+|||+
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            3567899999999 899999999999999999999999999888877654322  122221   110  22458999999


Q ss_pred             CCCCC
Q 009464          452 TSIGM  456 (534)
Q Consensus       452 t~~g~  456 (534)
                      ++...
T Consensus        85 ag~~~   89 (245)
T PRK07060         85 AGIAS   89 (245)
T ss_pred             CCCCC
Confidence            98653

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.00012  Score=72.48  Aligned_cols=73  Identities=34%  Similarity=0.425  Sum_probs=54.7

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---c----cccccc---cccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H----ALSLAD---LENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~----~~~~~~---~~~~------~~~~  444 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..   .    ..++.+   +..+      ..+.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999 8999999999999999999999999888888776531   1    112211   1110      2356


Q ss_pred             ceEEEEcCCC
Q 009464          445 GMILANTTSI  454 (534)
Q Consensus       445 ~divVn~t~~  454 (534)
                      .|++||+++.
T Consensus        83 ~d~vi~~ag~   92 (258)
T PRK07890         83 VDALVNNAFR   92 (258)
T ss_pred             ccEEEECCcc
Confidence            8999999875

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.62  E-value=0.00062  Score=68.50  Aligned_cols=164  Identities=23%  Similarity=0.284  Sum_probs=104.6

Q ss_pred             HHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEe----c-
Q 009464          276 NEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRR----Q-  345 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~----~-  345 (534)
                      .+..+++|++.....++-+    ++.+.++.+ .+..+.|+-|-.|+-..    +|+    -+.+.+++.-.--    + 
T Consensus        53 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~----i~~----~~i~~~I~p~KDVDGl~p~  124 (284)
T PRK14170         53 QKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEH----ISE----EKVIDTISYDKDVDGFHPV  124 (284)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCC----CCH----HHHHhccCcccCcccCChh
Confidence            5578999999887777652    466666666 46789999999997421    111    0112222221100    0 


Q ss_pred             cCCeEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          346 SDGKLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       346 ~~g~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      +-|+++ |.    ----.|+++-|+..           +.++.||+++|+|-+ -.|+.++..|.+.|+.|+++......
T Consensus       125 N~g~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~  193 (284)
T PRK14170        125 NVGNLFIGKDSFVPCTPAGIIELIKST-----------GTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKD  193 (284)
T ss_pred             hhhHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC
Confidence            001111 10    01145666655431           357899999999995 77999999999999999998643221


Q ss_pred             HHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          420 ARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       420 a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .                 .+ ...++||||.++|..   .    -+..++++++.+|+|+-.+.
T Consensus       194 l-----------------~~-~~~~ADIvI~AvG~~---~----~i~~~~vk~GavVIDvGin~  232 (284)
T PRK14170        194 L-----------------PQ-VAKEADILVVATGLA---K----FVKKDYIKPGAIVIDVGMDR  232 (284)
T ss_pred             H-----------------HH-HHhhCCEEEEecCCc---C----ccCHHHcCCCCEEEEccCcc
Confidence            1                 11 234579999988743   1    26778999999999998775

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.62  E-value=9.9e-05  Score=80.97  Aligned_cols=73  Identities=21%  Similarity=0.208  Sum_probs=55.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--------------cc--ccccc---ccccC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--------------HA--LSLAD---LENFN  441 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--------------~~--~~~~~---~~~~~  441 (534)
                      .+||+++|+|| |++|++++..|++.|++|+++.|+.++++.+.+.+..              ..  .++.+   +.+ .
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~-a  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP-A  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH-H
Confidence            35789999999 9999999999999999999999999998877654321              01  12222   222 4


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      +++.|+|||+++..
T Consensus       157 LggiDiVVn~AG~~  170 (576)
T PLN03209        157 LGNASVVICCIGAS  170 (576)
T ss_pred             hcCCCEEEEccccc
Confidence            56789999998754

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.62  E-value=0.00016  Score=71.94  Aligned_cols=70  Identities=24%  Similarity=0.218  Sum_probs=52.4

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--cc----ccccc---cccc------CCCCceEEE
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPEDGMILA  449 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~~~---~~~~------~~~~~divV  449 (534)
                      +++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..  ..    .++.+   +.++      ..+..|+||
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6899999 8999999999999999999999999988887766531  11    12211   1110      245789999


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      |+++..
T Consensus        82 ~naG~~   87 (259)
T PRK08340         82 WNAGNV   87 (259)
T ss_pred             ECCCCC
Confidence            999864

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.61  E-value=0.00015  Score=72.35  Aligned_cols=74  Identities=22%  Similarity=0.274  Sum_probs=53.6

Q ss_pred             ccCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHHHHc-Ccc----cccccc----------cc
Q 009464          381 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRT---YDRARELAETVG-GHA----LSLADL----------EN  439 (534)
Q Consensus       381 ~l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~---~~~a~~la~~~~-~~~----~~~~~~----------~~  439 (534)
                      .+++|+++|+|+   +|+|+++|+.|++.|++|++.+|+   .++++++++++. ...    +++.+.          .+
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            357899999998   599999999999999999998765   456677776653 111    122211          11


Q ss_pred             cCCCCceEEEEcCCCC
Q 009464          440 FNPEDGMILANTTSIG  455 (534)
Q Consensus       440 ~~~~~~divVn~t~~g  455 (534)
                       ..+..|++|||++..
T Consensus        84 -~~g~ld~lv~nag~~   98 (257)
T PRK08594         84 -EVGVIHGVAHCIAFA   98 (257)
T ss_pred             -hCCCccEEEECcccC
Confidence             346789999999864

>PRK05855 short chain dehydrogenase; Validated

Probab=97.60  E-value=2.7e-05  Score=86.33  Aligned_cols=119  Identities=27%  Similarity=0.299  Sum_probs=74.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~  443 (534)
                      .+.+++++|+|+ ||+|++++..|++.|++|++++|+.++++++++.+..   ..    +++.+.+   ++      ..+
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            456789999999 9999999999999999999999999998888776531   11    1222211   10      235


Q ss_pred             CceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC--CeEeccHH
Q 009464          444 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG--ATIVSGLE  504 (534)
Q Consensus       444 ~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G--~~ii~Gl~  504 (534)
                      ..|+|||++++.....  ....+.+.+   ..++++|+...   ...++..++++|  .++++-.+
T Consensus       392 ~id~lv~~Ag~~~~~~--~~~~~~~~~---~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS  452 (582)
T PRK05855        392 VPDIVVNNAGIGMAGG--FLDTSAEDW---DRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVAS  452 (582)
T ss_pred             CCcEEEECCccCCCCC--cccCCHHHH---HHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence            6899999998754221  111222222   34566665422   223445555543  35554433

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00016  Score=71.12  Aligned_cols=75  Identities=28%  Similarity=0.352  Sum_probs=54.8

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccccc---------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLENF---------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~~~---------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.+..+.+.+.+..   ..    .++.+..+.         ..+
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            356899999999 9999999999999999999999998877776665421   11    122211110         124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||+++..
T Consensus        83 ~id~vi~~ag~~   94 (250)
T PRK07774         83 GIDYLVNNAAIY   94 (250)
T ss_pred             CCCEEEECCCCc
Confidence            689999999874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.60  E-value=0.00018  Score=71.24  Aligned_cols=76  Identities=24%  Similarity=0.312  Sum_probs=56.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      ..+++|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.+++..   ..    .++.+   +.++      ..
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4578999999999 8999999999999999999999999888777766531   11    12221   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++|++++..
T Consensus        87 ~~id~vi~~ag~~   99 (256)
T PRK06124         87 GRLDILVNNVGAR   99 (256)
T ss_pred             CCCCEEEECCCCC
Confidence            5679999999864

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=97.60  E-value=0.00089  Score=69.14  Aligned_cols=164  Identities=23%  Similarity=0.249  Sum_probs=104.4

Q ss_pred             HHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEe----c-
Q 009464          276 NEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRR----Q-  345 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~----~-  345 (534)
                      .+..+++|++..-..++-+    ++.+.++.+ .++++.|+-|-.|+...    +|+    -+.+.+++.-.--    + 
T Consensus       125 ~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~----id~----~~i~~aI~P~KDVDGl~p~  196 (364)
T PLN02616        125 KKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSH----MDE----QNILNAVSIEKDVDGFHPL  196 (364)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCC----CCH----HHHHhccCcccCcccCChh
Confidence            4578999999766655542    566666666 46789999999997521    111    1112222221100    0 


Q ss_pred             cCCeEE-EE------eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          346 SDGKLF-GY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       346 ~~g~l~-G~------NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +-|++. |.      ----.|+++-|+..           +.+++||+++|+|-+ -.|+.++..|.++|+.|+++....
T Consensus       197 N~G~L~~g~~~~~f~PCTp~avielL~~y-----------~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T  265 (364)
T PLN02616        197 NIGRLAMRGREPLFVPCTPKGCIELLHRY-----------NVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT  265 (364)
T ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCC
Confidence            001221 10      01145666665532           367899999999995 779999999999999999986432


Q ss_pred             HHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          418 DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       418 ~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      ...                 .+ ...++||||.++|..   .    -+..++++++.+|+|+=.+.
T Consensus       266 ~nl-----------------~~-~~r~ADIVIsAvGkp---~----~i~~d~vK~GAvVIDVGIn~  306 (364)
T PLN02616        266 KNP-----------------EE-ITREADIIISAVGQP---N----MVRGSWIKPGAVVIDVGINP  306 (364)
T ss_pred             CCH-----------------HH-HHhhCCEEEEcCCCc---C----cCCHHHcCCCCEEEeccccc
Confidence            211                 11 234589999988742   1    26788999999999987664

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00015  Score=71.52  Aligned_cols=75  Identities=24%  Similarity=0.330  Sum_probs=55.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+..   ..    .++.+   +.++      ..+
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999 8999999999999999999999999887776665421   11    12211   1110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||+++..
T Consensus        84 ~id~li~~ag~~   95 (253)
T PRK06172         84 RLDYAFNNAGIE   95 (253)
T ss_pred             CCCEEEECCCCC
Confidence            679999999764

>PRK06484 short chain dehydrogenase; Validated

Probab=97.59  E-value=0.00015  Score=79.77  Aligned_cols=75  Identities=28%  Similarity=0.419  Sum_probs=58.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      ...+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.++.+.    .++.+   +.++      ..+..|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899999999 899999999999999999999999999998888765332    12221   1110      235789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +||||++..
T Consensus       346 ~li~nAg~~  354 (520)
T PRK06484        346 VLVNNAGIA  354 (520)
T ss_pred             EEEECCCCc
Confidence            999999864

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.59  E-value=0.00021  Score=71.39  Aligned_cols=75  Identities=24%  Similarity=0.285  Sum_probs=51.0

Q ss_pred             ccCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHcCcc---ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGHA---LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~~---~~~~~---~~~~------~~  442 (534)
                      .+++|.++|+|++   |+|++++..|++.|++|++..|+.   +.++++.++++...   +++.+   +.++      ..
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999994   899999999999999999998884   23344444333211   12221   1110      34


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++||+++..
T Consensus        85 g~iDilVnnag~~   97 (260)
T PRK06603         85 GSFDFLLHGMAFA   97 (260)
T ss_pred             CCccEEEEccccC
Confidence            6799999998764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.59  E-value=0.00018  Score=71.68  Aligned_cols=76  Identities=24%  Similarity=0.227  Sum_probs=57.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----cccccc---ccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~---~~~------~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+.+..   +.    .++.+.   .++      ..
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4567899999999 8999999999999999999999999888777666531   11    122211   110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+||++++..
T Consensus        86 ~~id~li~~ag~~   98 (265)
T PRK07097         86 GVIDILVNNAGII   98 (265)
T ss_pred             CCCCEEEECCCCC
Confidence            5689999999875

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.58  E-value=0.00049  Score=69.22  Aligned_cols=183  Identities=16%  Similarity=0.214  Sum_probs=111.4

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHh--hcccccCH
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDT  330 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~--~~ld~~~~  330 (534)
                      .-++| +|-+++---.. -+..+++|++.....++-    +++.+.++.+ .++++.|+-|-+|+...+-  ..++.+++
T Consensus        35 ii~vg~d~as~~Yv~~k-~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p  113 (282)
T PRK14166         35 VILVGDNPASQTYVKSK-AKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIIS  113 (282)
T ss_pred             EEEeCCCHHHHHHHHHH-HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc
Confidence            33455 44444333222 456799999988777764    2466666666 4678999999999753211  11111111


Q ss_pred             HHHHhcCeeEEEEeccCCeEE-EE-----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHH
Q 009464          331 VAKSIGAVNCIIRRQSDGKLF-GY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGA  403 (534)
Q Consensus       331 ~A~~iGAvNTi~~~~~~g~l~-G~-----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L  403 (534)
                       .+.+-..+.+-    -|+++ |.     ----.|+++-|+..           +.++.||+++|+|-+ -.|+.++..|
T Consensus       114 -~KDVDGl~~~N----~g~l~~g~~~~~~PcTp~avi~lL~~y-----------~i~l~Gk~vvVvGrS~iVGkPla~lL  177 (282)
T PRK14166        114 -SKDVDGFHPIN----VGYLNLGLESGFLPCTPLGVMKLLKAY-----------EIDLEGKDAVIIGASNIVGRPMATML  177 (282)
T ss_pred             -ccCcccCChhh----hHHHhcCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHH
Confidence             01111111110    01111 10     01145666655431           357899999999995 7799999999


Q ss_pred             HHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          404 KAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       404 ~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .+.|+.|+++.+.....+                 + ...++||||.++|..   .    -+..++++++.+|+|+-.+.
T Consensus       178 ~~~~atVt~chs~T~nl~-----------------~-~~~~ADIvIsAvGkp---~----~i~~~~vk~GavVIDvGin~  232 (282)
T PRK14166        178 LNAGATVSVCHIKTKDLS-----------------L-YTRQADLIIVAAGCV---N----LLRSDMVKEGVIVVDVGINR  232 (282)
T ss_pred             HHCCCEEEEeCCCCCCHH-----------------H-HHhhCCEEEEcCCCc---C----ccCHHHcCCCCEEEEecccc
Confidence            999999999875432211                 1 224579999988742   1    26778999999999998765

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00016  Score=71.74  Aligned_cols=75  Identities=31%  Similarity=0.373  Sum_probs=56.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----cc----ccccccc---cc--CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLADLE---NF--NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~----~~~~~~~---~~--~~~~~d  446 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..    ..    .++.+..   ++  ..+..|
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            457899999999 8999999999999999999999999988887665531    11    1222211   10  245789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++||+++..
T Consensus        84 ~lv~~ag~~   92 (259)
T PRK06125         84 ILVNNAGAI   92 (259)
T ss_pred             EEEECCCCC
Confidence            999999764

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.58  E-value=0.0011  Score=66.69  Aligned_cols=183  Identities=17%  Similarity=0.210  Sum_probs=112.1

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHHh--hcccccCH
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDT  330 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v~--~~ld~~~~  330 (534)
                      .-++| +|-+++-- ..-.+.++++|++.....++-+    ++.+.++.+ .+.++.|+-|-.|.-..+-  ..++.+++
T Consensus        31 iI~vg~d~as~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p  109 (287)
T PRK14181         31 VVLIGNDPASEVYV-GMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISP  109 (287)
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCc
Confidence            33455 33333322 3345678999999888877653    567777777 4678999999999742211  11111111


Q ss_pred             HHHHhcCeeEEEEeccCCeEE-EE-----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHH
Q 009464          331 VAKSIGAVNCIIRRQSDGKLF-GY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGA  403 (534)
Q Consensus       331 ~A~~iGAvNTi~~~~~~g~l~-G~-----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L  403 (534)
                      . +.+-..+..-    -|+++ |.     ----.|+++-|+..           +.++.||+++|+|-+ -.||.++.-|
T Consensus       110 ~-KDVDGl~p~n----~g~l~~g~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL  173 (287)
T PRK14181        110 D-KDVDGLHPVN----MGKLLLGETDGFIPCTPAGIIELLKYY-----------EIPLHGRHVAIVGRSNIVGKPLAALL  173 (287)
T ss_pred             c-cCcccCChhh----HHHHhcCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHH
Confidence            0 1111111110    01221 11     01145666655432           357899999999995 7799999999


Q ss_pred             HHC----CCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEE
Q 009464          404 KAK----GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  479 (534)
Q Consensus       404 ~~~----G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv  479 (534)
                      .++    ++.|+++.......                 .+ ...++||||.++|..   .    -+..++++++.+|+|+
T Consensus       174 ~~~~~~~~AtVtvchs~T~~l-----------------~~-~~~~ADIvV~AvG~p---~----~i~~~~ik~GavVIDv  228 (287)
T PRK14181        174 MQKHPDTNATVTLLHSQSENL-----------------TE-ILKTADIIIAAIGVP---L----FIKEEMIAEKAVIVDV  228 (287)
T ss_pred             HhCcCCCCCEEEEeCCCCCCH-----------------HH-HHhhCCEEEEccCCc---C----ccCHHHcCCCCEEEEe
Confidence            998    78999987432211                 11 224579999988743   1    3678899999999999


Q ss_pred             ecCC
Q 009464          480 VYTP  483 (534)
Q Consensus       480 ~y~p  483 (534)
                      -.+.
T Consensus       229 Gin~  232 (287)
T PRK14181        229 GTSR  232 (287)
T ss_pred             cccc
Confidence            8765

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=97.58  E-value=0.00011  Score=74.10  Aligned_cols=111  Identities=19%  Similarity=0.214  Sum_probs=75.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++.+||-|.||..+|..|.+.|+.|+++||+++++.+.+...+.....-  ..+ .....|+||.+.+-+.  .....-+
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s--~~e-aa~~aDvVitmv~~~~--~V~~V~~   76 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAAS--PAE-AAAEADVVITMLPDDA--AVRAVLF   76 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCC--HHH-HHHhCCEEEEecCCHH--HHHHHHh
Confidence            6889999999999999999999999999999999777777655433211  111 2345799998775321  1111112


Q ss_pred             Cc----cccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEec
Q 009464          466 PK----HALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  501 (534)
Q Consensus       466 ~~----~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii~  501 (534)
                      .+    ..++++.+++|++.... .+ .+.+.++++|+..++
T Consensus        77 g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lD  118 (286)
T COG2084          77 GENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLD  118 (286)
T ss_pred             CccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEe
Confidence            22    23457899999997644 33 555667778875543

>PRK08643 acetoin reductase; Validated

Probab=97.58  E-value=0.00016  Score=71.60  Aligned_cols=72  Identities=24%  Similarity=0.311  Sum_probs=53.9

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCCCce
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPEDGM  446 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~~~d  446 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++..++..   ..    .++.+.+   +.      ..+..|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999 8999999999999999999999999888887766531   11    1222111   10      235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++||+++..
T Consensus        82 ~vi~~ag~~   90 (256)
T PRK08643         82 VVVNNAGVA   90 (256)
T ss_pred             EEEECCCCC
Confidence            999999764

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00018  Score=71.23  Aligned_cols=76  Identities=26%  Similarity=0.340  Sum_probs=53.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHcC---cc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGG---HA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~~---~~----~~~~~---~~~~------~  441 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+.+ .++++.+.+..   ..    .++.+   +.++      .
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3577899999999 89999999999999999999998754 44555554421   11    12111   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|++||+++..
T Consensus        84 ~g~id~li~~ag~~   97 (254)
T PRK06114         84 LGALTLAVNAAGIA   97 (254)
T ss_pred             cCCCCEEEECCCCC
Confidence            45689999999865

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00018  Score=70.79  Aligned_cols=74  Identities=34%  Similarity=0.485  Sum_probs=55.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc--Ccc----ccccc---cccc------CCCCc
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~--~~~----~~~~~---~~~~------~~~~~  445 (534)
                      +++|+++|+|+ |++|++++..|++.|++|+++.|+.++.++..+.+.  ...    .++.+   +.+.      ..+..
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            56899999999 899999999999999999999999988877776652  111    12221   1110      23578


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+|||+++..
T Consensus        83 d~vi~~ag~~   92 (252)
T PRK06138         83 DVLVNNAGFG   92 (252)
T ss_pred             CEEEECCCCC
Confidence            9999999864

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.58  E-value=0.00087  Score=67.92  Aligned_cols=167  Identities=21%  Similarity=0.232  Sum_probs=104.7

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHH--hhcccccCHHHHHhcCeeEEEEeccCC
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSDG  348 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v--~~~ld~~~~~A~~iGAvNTi~~~~~~g  348 (534)
                      -+.++++|++..-..++.    +++.+.++.+ .++++.|+-|-.|+-..+  ...++.+++. +.+-..+..-    -|
T Consensus        54 ~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~-KDVDGl~~~n----~g  128 (297)
T PRK14186         54 EKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPD-KDADGLHPLN----LG  128 (297)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcc-cCcccCChhh----HH
Confidence            557899999987666653    2567777766 467899999999974221  1111111110 1111111100    01


Q ss_pred             eEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 009464          349 KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARE  422 (534)
Q Consensus       349 ~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~~  422 (534)
                      ++. |.    -.--.|+++-|+..           +.++.||+++|+|-+ -.|+.++.-|.++|+.|+++.......  
T Consensus       129 ~l~~~~~~~~PcTp~aii~lL~~~-----------~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l--  195 (297)
T PRK14186        129 RLVKGEPGLRSCTPAGVMRLLRSQ-----------QIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDL--  195 (297)
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH--
Confidence            110 10    11245666655432           357899999999995 779999999999999999985432211  


Q ss_pred             HHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          423 LAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       423 la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                                     .+ ...++||||.++|..   .    -+..++++++.+|+|+-.+.
T Consensus       196 ---------------~~-~~~~ADIvIsAvGkp---~----~i~~~~ik~gavVIDvGin~  233 (297)
T PRK14186        196 ---------------AS-ITREADILVAAAGRP---N----LIGAEMVKPGAVVVDVGIHR  233 (297)
T ss_pred             ---------------HH-HHhhCCEEEEccCCc---C----ccCHHHcCCCCEEEEecccc
Confidence                           11 224589999988742   2    36788999999999998765

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.0002  Score=72.08  Aligned_cols=73  Identities=22%  Similarity=0.278  Sum_probs=53.2

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc-------CCCCceEEEE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF-------NPEDGMILAN  450 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~-------~~~~~divVn  450 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+. +...  .++.+   +.++       ..+..|+|||
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE-GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            578999999 9999999999999999999999999988777542 2111  12221   1110       1246899999


Q ss_pred             cCCCCCC
Q 009464          451 TTSIGMQ  457 (534)
Q Consensus       451 ~t~~g~~  457 (534)
                      +++.+..
T Consensus        83 ~Ag~~~~   89 (277)
T PRK05993         83 NGAYGQP   89 (277)
T ss_pred             CCCcCCC
Confidence            9987643

>PRK12742 oxidoreductase; Provisional

Probab=97.57  E-value=0.00022  Score=69.56  Aligned_cols=74  Identities=28%  Similarity=0.364  Sum_probs=53.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHcCcc--ccccc---cccc--CCCCceEEEEcC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGGHA--LSLAD---LENF--NPEDGMILANTT  452 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~~~~--~~~~~---~~~~--~~~~~divVn~t  452 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++..| +.++.+++.++++...  .++.+   +.+.  ..+..|++||++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            56899999999 89999999999999999887754 6777777776654332  12222   1110  234689999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus        84 g~~   86 (237)
T PRK12742         84 GIA   86 (237)
T ss_pred             CCC
Confidence            864

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=97.57  E-value=0.003  Score=64.97  Aligned_cols=213  Identities=19%  Similarity=0.213  Sum_probs=127.4

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHH
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  332 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A  332 (534)
                      .-++| +|-+++-- ..-.+..+++|++..-..++-+    ++.+.++.+ .+..+.|+-|-.|+..    ++|+    -
T Consensus        91 iIlvGddpaS~~Yv-~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~~V~GIlVQlPLP~----hid~----~  161 (345)
T PLN02897         91 VVLVGQQRDSQTYV-RNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLPQ----HLDE----S  161 (345)
T ss_pred             EEEeCCChHHHHHH-HHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH----H
Confidence            34556 44443222 2234578999999887777643    566666666 5778999999999752    1111    1


Q ss_pred             HHhcCeeEEEEeccC-------CeE-EEE------eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHH
Q 009464          333 KSIGAVNCIIRRQSD-------GKL-FGY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGK  397 (534)
Q Consensus       333 ~~iGAvNTi~~~~~~-------g~l-~G~------NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~gr  397 (534)
                      +.+.+++.-.--  |       |++ .|.      ----.|+++-|+..           +.+++||+++|+|-+ -+|+
T Consensus       162 ~i~~~I~p~KDV--DGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~-----------~i~l~GK~vvVIGRS~iVGk  228 (345)
T PLN02897        162 KILNMVRLEKDV--DGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRS-----------GVEIAGKNAVVIGRSNIVGL  228 (345)
T ss_pred             HHHhccCcccCc--cCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccccH
Confidence            122222221100  1       122 110      01135666655432           357899999999995 7799


Q ss_pred             HHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEE
Q 009464          398 ALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF  477 (534)
Q Consensus       398 aia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~  477 (534)
                      .++..|.++|+.|+++.......                 .+ ...++||||.++|..   .    -+..++++++.+|+
T Consensus       229 Pla~LL~~~~ATVTicHs~T~nl-----------------~~-~~~~ADIvIsAvGkp---~----~v~~d~vk~GavVI  283 (345)
T PLN02897        229 PMSLLLQRHDATVSTVHAFTKDP-----------------EQ-ITRKADIVIAAAGIP---N----LVRGSWLKPGAVVI  283 (345)
T ss_pred             HHHHHHHHCCCEEEEEcCCCCCH-----------------HH-HHhhCCEEEEccCCc---C----ccCHHHcCCCCEEE
Confidence            99999999999999986432211                 11 234589999988743   1    26788999999999


Q ss_pred             EEecCCChh-------------HHHHHHHHCCC-eEecc------HHHHHHHHHHHHHHhc
Q 009464          478 DAVYTPKIT-------------RLLREAEESGA-TIVSG------LEMFIGQAYEQYERFT  518 (534)
Q Consensus       478 Dv~y~p~~T-------------~ll~~A~~~G~-~ii~G------l~ml~~Qa~~qf~lwt  518 (534)
                      |+-.++...             .|-...+..++ .-++|      ..||+...+.+.+.|.
T Consensus       284 DVGin~~~~~~~~~g~klvGDVdfe~v~~~as~iTPVPGGVGpmTvamLm~N~~~a~~~~~  344 (345)
T PLN02897        284 DVGTTPVEDSSCEFGYRLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLDAAKRIF  344 (345)
T ss_pred             EccccccccccccCCCeeEecccHHHHHhhccccCCCCCchhHHHHHHHHHHHHHHHHHhc
Confidence            998775311             12222222232 22322      4677777777776664

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.00015  Score=71.89  Aligned_cols=72  Identities=21%  Similarity=0.232  Sum_probs=53.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc--c----ccccc---cccc------CCCCceE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--A----LSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~----~~~~~---~~~~------~~~~~di  447 (534)
                      +++++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+...  .    +++.+   +.++      ..+..|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            478999998 89999999999999999999999999888877765321  1    12221   1110      2345799


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      +||+++..
T Consensus        82 lv~~ag~~   89 (257)
T PRK07024         82 VIANAGIS   89 (257)
T ss_pred             EEECCCcC
Confidence            99999865

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.0002  Score=70.63  Aligned_cols=76  Identities=26%  Similarity=0.427  Sum_probs=56.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|.+.|++|++++|+.++++++.+++..   ..    .++.+   +.++      ..
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3577899999999 8999999999999999999999999888887776531   11    12211   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++||+++..
T Consensus        84 ~~id~li~~ag~~   96 (252)
T PRK07035         84 GRLDILVNNAAAN   96 (252)
T ss_pred             CCCCEEEECCCcC
Confidence            4689999999753

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.0003  Score=69.20  Aligned_cols=72  Identities=24%  Similarity=0.313  Sum_probs=54.0

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----cccccc----------cccCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLADL----------ENFNPE  443 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~~----------~~~~~~  443 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++...+..     ..    .++.+.          .+ ..+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD-ELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH-HcC
Confidence            578999999 8999999999999999999999999988877665421     11    122211          11 245


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|++||+++++.
T Consensus        81 ~id~vi~~ag~~~   93 (248)
T PRK08251         81 GLDRVIVNAGIGK   93 (248)
T ss_pred             CCCEEEECCCcCC
Confidence            6899999998764

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.55  E-value=0.00021  Score=73.42  Aligned_cols=73  Identities=23%  Similarity=0.363  Sum_probs=55.5

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc--------cccccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA--------LSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~--------~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      +++.|+|+|++|+++++.|+..|.  +|++++|+.++++.++.++....        ....+.+  ....+|+||+|++.
T Consensus         1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~--~l~~aDIVIitag~   78 (306)
T cd05291           1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS--DCKDADIVVITAGA   78 (306)
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH--HhCCCCEEEEccCC
Confidence            378999999999999999999995  89999999999999888773210        0111111  24578999999988


Q ss_pred             CCCCC
Q 009464          455 GMQPK  459 (534)
Q Consensus       455 g~~~~  459 (534)
                      ...|.
T Consensus        79 ~~~~g   83 (306)
T cd05291          79 PQKPG   83 (306)
T ss_pred             CCCCC
Confidence            65543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00025  Score=71.27  Aligned_cols=73  Identities=27%  Similarity=0.336  Sum_probs=54.0

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccccc---cc------CCCCceEEE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADLE---NF------NPEDGMILA  449 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~~~---~~------~~~~~divV  449 (534)
                      +|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+.+.+..+...    .++.+..   ++      ..+..|+||
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv   83 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV   83 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            578999999 899999999999999999999999998887766543211    1222111   10      234689999


Q ss_pred             EcCCCCC
Q 009464          450 NTTSIGM  456 (534)
Q Consensus       450 n~t~~g~  456 (534)
                      |+++...
T Consensus        84 ~~ag~~~   90 (277)
T PRK06180         84 NNAGYGH   90 (277)
T ss_pred             ECCCccC
Confidence            9998753

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00025  Score=70.91  Aligned_cols=75  Identities=21%  Similarity=0.282  Sum_probs=54.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---c----cccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H----ALSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~----~~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+..   +    ..++.+   +.++      ..+
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999 8999999999999999999999998887776555431   1    112211   1110      234


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++..
T Consensus        86 ~iD~vi~~ag~~   97 (264)
T PRK07576         86 PIDVLVSGAAGN   97 (264)
T ss_pred             CCCEEEECCCCC
Confidence            689999998754

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.53  E-value=0.001  Score=67.41  Aligned_cols=206  Identities=19%  Similarity=0.231  Sum_probs=122.9

Q ss_pred             HHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHH--hhcccccCHHHHHhcCeeEEEEecc
Q 009464          274 LYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQS  346 (534)
Q Consensus       274 ~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v--~~~ld~~~~~A~~iGAvNTi~~~~~  346 (534)
                      .-.+.++++|++.....++-+    ++.+.++.+ .+.++.|+-|-+|+...+  ...++.+++. +.+-..+..-    
T Consensus        51 ~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~-KDVDGl~~~n----  125 (297)
T PRK14167         51 MKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPA-KDVDGFHPEN----  125 (297)
T ss_pred             HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcc-cCcccCChhh----
Confidence            335678999999988877752    566666666 577899999999975321  1112111110 1111111110    


Q ss_pred             CCeEE-EEe----ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHC----CCeEEEEeCC
Q 009464          347 DGKLF-GYN----TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK----GARVVIANRT  416 (534)
Q Consensus       347 ~g~l~-G~N----TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~----G~~v~i~~R~  416 (534)
                      -|+++ |.+    ---.|+++-|+..           +.++.||+++|+|.+ -.|+.++.-|.++    ++.|+++...
T Consensus       126 ~g~l~~g~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~  194 (297)
T PRK14167        126 VGRLVAGDARFKPCTPHGIQKLLAAA-----------GVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSR  194 (297)
T ss_pred             hHHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCC
Confidence            01111 111    1245666655432           357899999999995 7799999999988    7899998543


Q ss_pred             HHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCCh--h--------
Q 009464          417 YDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI--T--------  486 (534)
Q Consensus       417 ~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~--T--------  486 (534)
                      ...   +              .+ ...++||||.|+|..   .    .+..++++++.+|+|+-.+...  |        
T Consensus       195 T~~---l--------------~~-~~~~ADIvIsAvGkp---~----~i~~~~ik~gaiVIDvGin~~~~~~~~g~kl~G  249 (297)
T PRK14167        195 TDD---L--------------AA-KTRRADIVVAAAGVP---E----LIDGSMLSEGATVIDVGINRVDADTEKGYELVG  249 (297)
T ss_pred             CCC---H--------------HH-HHhhCCEEEEccCCc---C----ccCHHHcCCCCEEEEccccccCcccccCCceee
Confidence            221   1              11 234589999988743   1    3677899999999999876521  1        


Q ss_pred             --HHHHHHHH-CCC-eEec-c-----HHHHHHHHHHHHHHhcCCC
Q 009464          487 --RLLREAEE-SGA-TIVS-G-----LEMFIGQAYEQYERFTGLP  521 (534)
Q Consensus       487 --~ll~~A~~-~G~-~ii~-G-----l~ml~~Qa~~qf~lwtg~~  521 (534)
                        .| ..+++ .++ .-++ |     ..||+++-+.+++.-.+.+
T Consensus       250 DVd~-e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~~  293 (297)
T PRK14167        250 DVEF-ESAKEKASAITPVPGGVGPMTRAMLLYNTVKAASLQEGVD  293 (297)
T ss_pred             cCcH-HHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhcCCC
Confidence              11 22222 222 1222 2     4788888877776554443

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00022  Score=71.01  Aligned_cols=74  Identities=27%  Similarity=0.359  Sum_probs=54.7

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--c--c--ccccccc---cc-----CCCCce
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLADLE---NF-----NPEDGM  446 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~--~--~~~~~~~---~~-----~~~~~d  446 (534)
                      +++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++..++..  .  .  .++.+..   ++     ..+..|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            46789999998 8999999999999999999999999988888766421  1  1  1222111   10     135689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++|++++..
T Consensus        83 ~lv~~ag~~   91 (263)
T PRK09072         83 VLINNAGVN   91 (263)
T ss_pred             EEEECCCCC
Confidence            999998764

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.53  E-value=0.00058  Score=73.81  Aligned_cols=72  Identities=29%  Similarity=0.343  Sum_probs=48.2

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHcC---cccccccccccCCCCceEEEEcCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGG---HALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~~---~~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      +++|+++|+|+|++|+++|..|++.|++|++++++. +..++..+++..   .....+...+ ..+.+|+||+++++
T Consensus         3 ~~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~d~vv~~~g~   78 (450)
T PRK14106          3 LKGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEE-FLEGVDLVVVSPGV   78 (450)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh-HhhcCCEEEECCCC
Confidence            568999999999999999999999999999999975 344443333321   1110011111 23457888887654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.53  E-value=0.00025  Score=69.75  Aligned_cols=74  Identities=31%  Similarity=0.426  Sum_probs=50.1

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.. ++.+.....+...    .++.+   +..+      ..+..|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999 89999999999999999999999753 2222222222211    12211   1110      235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++||+++..
T Consensus        83 ~li~~ag~~   91 (248)
T TIGR01832        83 ILVNNAGII   91 (248)
T ss_pred             EEEECCCCC
Confidence            999999865

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.53  E-value=0.0018  Score=65.23  Aligned_cols=165  Identities=16%  Similarity=0.236  Sum_probs=105.2

Q ss_pred             HHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEe----c
Q 009464          275 YNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRR----Q  345 (534)
Q Consensus       275 hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~----~  345 (534)
                      --+..+++|++.....++-    +++.+.++.+ .+..+.|+-|-+|+-.    ++|+    -+.+.+++.-.--    +
T Consensus        53 k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~----~id~----~~i~~~I~p~KDVDGl~~  124 (284)
T PRK14193         53 KHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPK----HLDE----NAVLERIDPAKDADGLHP  124 (284)
T ss_pred             HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH----HHHHhcCCcccCccCCCh
Confidence            3557899999988777764    2566666666 4678999999999742    1111    1122222222100    0


Q ss_pred             -cCCeEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHH--CCCeEEEEeCC
Q 009464          346 -SDGKLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKA--KGARVVIANRT  416 (534)
Q Consensus       346 -~~g~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~--~G~~v~i~~R~  416 (534)
                       +-|+++ |.    -.--.|+++-|+..           +.++.||+++|+|.+ -.|+.++..|.+  +|+.|+++...
T Consensus       125 ~n~g~l~~~~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~  193 (284)
T PRK14193        125 TNLGRLVLNEPAPLPCTPRGIVHLLRRY-----------DVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTG  193 (284)
T ss_pred             hhhhHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCC
Confidence             001111 11    11245666655431           357899999999995 779999999998  78899998753


Q ss_pred             HHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          417 YDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       417 ~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      ...   +              .+ ...++|+||.++|..   .    -+..++++++.+|+|+-.+.
T Consensus       194 T~~---l--------------~~-~~k~ADIvV~AvGkp---~----~i~~~~ik~GavVIDvGin~  235 (284)
T PRK14193        194 TRD---L--------------AA-HTRRADIIVAAAGVA---H----LVTADMVKPGAAVLDVGVSR  235 (284)
T ss_pred             CCC---H--------------HH-HHHhCCEEEEecCCc---C----ccCHHHcCCCCEEEEccccc
Confidence            221   1              11 234589999988743   1    36788999999999998775

>PRK06484 short chain dehydrogenase; Validated

Probab=97.52  E-value=0.00019  Score=78.87  Aligned_cols=72  Identities=29%  Similarity=0.485  Sum_probs=56.1

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMIL  448 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~div  448 (534)
                      ++|+++|+|+ +|+|++++..|+++|++|++++|+.++++++.++++...    .++.+   +.++      ..+..|+|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5799999999 799999999999999999999999999988888775322    12221   1110      23578999


Q ss_pred             EEcCCC
Q 009464          449 ANTTSI  454 (534)
Q Consensus       449 Vn~t~~  454 (534)
                      ||++++
T Consensus        84 i~nag~   89 (520)
T PRK06484         84 VNNAGV   89 (520)
T ss_pred             EECCCc
Confidence            999986

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.52  E-value=0.00023  Score=70.40  Aligned_cols=75  Identities=31%  Similarity=0.375  Sum_probs=55.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~  443 (534)
                      ++++|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.+.+..   ..    .++.+..   ++      ..+
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            356899999999 9999999999999999999999999888777766532   11    1222211   10      234


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+||++++..
T Consensus        84 ~~d~vi~~ag~~   95 (262)
T PRK13394         84 SVDILVSNAGIQ   95 (262)
T ss_pred             CCCEEEECCccC
Confidence            589999999865

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.52  E-value=0.0017  Score=65.72  Aligned_cols=168  Identities=18%  Similarity=0.241  Sum_probs=103.4

Q ss_pred             HHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHH--hhcccccCHHHHHhcCeeEEEEeccC
Q 009464          275 YNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVAKSIGAVNCIIRRQSD  347 (534)
Q Consensus       275 hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v--~~~ld~~~~~A~~iGAvNTi~~~~~~  347 (534)
                      -.+.++++|++.....++-+    ++.+.++.+ .+..+.|+-|-.|+...+  ...++.+++. +.+-..+.+    +-
T Consensus        52 k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~-KDVDGl~~~----N~  126 (293)
T PRK14185         52 KVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYR-KDVDGFHPI----NV  126 (293)
T ss_pred             HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcc-cCcCCCCHh----hH
Confidence            35688999999877666642    466666666 567899999999975211  0111111110 000000000    00


Q ss_pred             CeEE-EE----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHC----CCeEEEEeCCH
Q 009464          348 GKLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK----GARVVIANRTY  417 (534)
Q Consensus       348 g~l~-G~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~----G~~v~i~~R~~  417 (534)
                      |++. |.    ----.|+++-|+..           +.++.||+++|+|-+ -.|+.++.-|.++    ++.|+++....
T Consensus       127 g~l~~~~~~~~PcTp~av~~lL~~~-----------~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T  195 (293)
T PRK14185        127 GRMSIGLPCFVSATPNGILELLKRY-----------HIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRS  195 (293)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCC
Confidence            1111 10    01245666665532           357899999999995 7799999999988    57999985432


Q ss_pred             HHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          418 DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       418 ~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      ...                 .+ ...++||||.++|..   .    -+..++++++.+|+|+-.++
T Consensus       196 ~nl-----------------~~-~~~~ADIvIsAvGkp---~----~i~~~~vk~gavVIDvGin~  236 (293)
T PRK14185        196 KNL-----------------KK-ECLEADIIIAALGQP---E----FVKADMVKEGAVVIDVGTTR  236 (293)
T ss_pred             CCH-----------------HH-HHhhCCEEEEccCCc---C----ccCHHHcCCCCEEEEecCcc
Confidence            211                 11 223579999988743   1    26788999999999998765

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.52  E-value=0.0064  Score=61.72  Aligned_cols=199  Identities=18%  Similarity=0.248  Sum_probs=121.5

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHH-----HHhhcccccCHHHHHhcCeeEEEEec
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKE-----AAVKCCDEVDTVAKSIGAVNCIIRRQ  345 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~-----~v~~~ld~~~~~A~~iGAvNTi~~~~  345 (534)
                      .+.++++|++.....++-    +++.+.++.+ .+.++.|+-|-.|+-.     .++..+   ++ .+.+-..+..-   
T Consensus        55 ~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I---~p-~KDVDGl~~~n---  127 (297)
T PRK14168         55 IKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAI---DP-DKDVDGFHPVN---  127 (297)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcc---Cc-cccccccChhh---
Confidence            567899999987666553    3566777666 5678999999999632     122111   11 01111111110   


Q ss_pred             cCCeE-EEE------eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHC----CCeEEEE
Q 009464          346 SDGKL-FGY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK----GARVVIA  413 (534)
Q Consensus       346 ~~g~l-~G~------NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~----G~~v~i~  413 (534)
                       -|++ .|.      ----.|+++-|+..           +.++.||+++|+|.+ -.|+.++.-|.++    ++.|+++
T Consensus       128 -~g~l~~~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~  195 (297)
T PRK14168        128 -VGRLMIGGDEVKFLPCTPAGIQEMLVRS-----------GVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIV  195 (297)
T ss_pred             -HHHHhcCCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEe
Confidence             0111 111      11145666655431           367899999999995 7799999999988    6899998


Q ss_pred             eCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---------
Q 009464          414 NRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---------  484 (534)
Q Consensus       414 ~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---------  484 (534)
                      .+....                 +.+ ...++||||.++|..   .    .+..++++++.+|+|+-.+..         
T Consensus       196 hs~T~~-----------------l~~-~~~~ADIvVsAvGkp---~----~i~~~~ik~gavVIDvGin~~~~~~~~g~~  250 (297)
T PRK14168        196 HTRSKN-----------------LAR-HCQRADILIVAAGVP---N----LVKPEWIKPGATVIDVGVNRVGTNESTGKA  250 (297)
T ss_pred             cCCCcC-----------------HHH-HHhhCCEEEEecCCc---C----ccCHHHcCCCCEEEecCCCccCccccCCCc
Confidence            643211                 111 234589999988743   1    367889999999999965531         


Q ss_pred             ----hhHHHHHHHH-CCC-eEec-c-----HHHHHHHHHHHHHHhcC
Q 009464          485 ----ITRLLREAEE-SGA-TIVS-G-----LEMFIGQAYEQYERFTG  519 (534)
Q Consensus       485 ----~T~ll~~A~~-~G~-~ii~-G-----l~ml~~Qa~~qf~lwtg  519 (534)
                          +-.| ..+++ .++ .-++ |     ..||++..+.+.+.|.|
T Consensus       251 ~~~GDVdf-e~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~  296 (297)
T PRK14168        251 ILSGDVDF-DAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAKFHLS  296 (297)
T ss_pred             ceeccccH-HHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhC
Confidence                1122 22233 222 1222 2     57899999999999876

>PLN02928 oxidoreductase family protein

Probab=97.52  E-value=0.00015  Score=75.61  Aligned_cols=74  Identities=18%  Similarity=0.268  Sum_probs=50.2

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH--------HHHcCcccccccccccCCCCceEEEEcC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA--------ETVGGHALSLADLENFNPEDGMILANTT  452 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la--------~~~~~~~~~~~~~~~~~~~~~divVn~t  452 (534)
                      .+.||++.|+|.|.+|+++|..|...|++|+.++|+..+.....        ..+........++.+ .+..+|+|++++
T Consensus       156 ~l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~e-ll~~aDiVvl~l  234 (347)
T PLN02928        156 TLFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYE-FAGEADIVVLCC  234 (347)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHH-HHhhCCEEEECC
Confidence            57799999999999999999999999999999999743221110        000000012233444 345678998888


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      |..
T Consensus       235 Plt  237 (347)
T PLN02928        235 TLT  237 (347)
T ss_pred             CCC
Confidence            764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.51  E-value=0.00022  Score=70.82  Aligned_cols=75  Identities=24%  Similarity=0.312  Sum_probs=52.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH---cCcc----cccccc---ccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLADL---ENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~----~~~~~~---~~~------~~  442 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|+++.|+ ++.+++.+.+   +...    .++.+.   .++      ..
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999 899999999999999999999998 5555554443   2111    122211   110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++||+++..
T Consensus        90 g~id~li~~ag~~  102 (258)
T PRK06935         90 GKIDILVNNAGTI  102 (258)
T ss_pred             CCCCEEEECCCCC
Confidence            5689999999864

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.51  E-value=0.00023  Score=72.80  Aligned_cols=35  Identities=29%  Similarity=0.527  Sum_probs=31.8

Q ss_pred             ccCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeC
Q 009464          381 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       381 ~l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R  415 (534)
                      ++.||+++|+|+|   |+|+++|..|++.|++|++.+|
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~   42 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW   42 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence            5689999999995   9999999999999999999654

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=97.51  E-value=0.0017  Score=65.75  Aligned_cols=164  Identities=17%  Similarity=0.163  Sum_probs=104.5

Q ss_pred             HHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEe----c-
Q 009464          276 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRR----Q-  345 (534)
Q Consensus       276 n~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~----~-  345 (534)
                      .+.++++|++..-..++-    +++.+.++.+ .++++.|+-|-.|+-.    ++|+    -+.+.+++.-.--    + 
T Consensus        61 ~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~----~id~----~~i~~~I~p~KDVDGl~~~  132 (299)
T PLN02516         61 RKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPK----HINE----EKILNEISLEKDVDGFHPL  132 (299)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCC----CcCH----HHHHhccCcccccCccCHh
Confidence            456899999987666653    3566666666 5778999999999642    1111    1122222221100    0 


Q ss_pred             cCCeEE-E--E----eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          346 SDGKLF-G--Y----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       346 ~~g~l~-G--~----NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +-|++. |  .    =---.|++.-|+..           +.++.||+++|+|-+ -.||.++.-|.++|+.|+++....
T Consensus       133 n~g~l~~~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T  201 (299)
T PLN02516        133 NIGKLAMKGREPLFLPCTPKGCLELLSRS-----------GIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRT  201 (299)
T ss_pred             hHhhHhcCCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC
Confidence            012222 1  0    01134555555431           367899999999995 779999999999999999996432


Q ss_pred             HHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          418 DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       418 ~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      ...                 .+ ...++||||.++|..       ..+..++++++.+|+|+-.+.
T Consensus       202 ~nl-----------------~~-~~~~ADIvv~AvGk~-------~~i~~~~vk~gavVIDvGin~  242 (299)
T PLN02516        202 PDP-----------------ES-IVREADIVIAAAGQA-------MMIKGDWIKPGAAVIDVGTNA  242 (299)
T ss_pred             CCH-----------------HH-HHhhCCEEEEcCCCc-------CccCHHHcCCCCEEEEeeccc
Confidence            211                 11 224579999987642       236788999999999998664

>PRK06398 aldose dehydrogenase; Validated

Probab=97.50  E-value=8.8e-05  Score=73.87  Aligned_cols=74  Identities=20%  Similarity=0.195  Sum_probs=50.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc------CCCCceEEEEcCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF------NPEDGMILANTTS  453 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~------~~~~~divVn~t~  453 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++...+ ..+..+..+.+++.++      ..+..|+|||+++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag   81 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDV-DYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAG   81 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCce-EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            467899999999 8999999999999999999999986543210 0001111111111110      2356899999998


Q ss_pred             CC
Q 009464          454 IG  455 (534)
Q Consensus       454 ~g  455 (534)
                      ..
T Consensus        82 ~~   83 (258)
T PRK06398         82 IE   83 (258)
T ss_pred             CC
Confidence            75

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.50  E-value=0.00025  Score=70.77  Aligned_cols=74  Identities=22%  Similarity=0.296  Sum_probs=51.7

Q ss_pred             cCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHHHcCc-c--ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANR---TYDRARELAETVGGH-A--LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R---~~~~a~~la~~~~~~-~--~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+   +|+|++++..|++.|++|++.+|   +.++.+++.++++.. .  +++.+   +.++      ..+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            56899999994   59999999999999999998764   455666666554321 1  12211   1110      246


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++..
T Consensus        84 ~iD~lvnnAG~~   95 (260)
T PRK06997         84 GLDGLVHSIGFA   95 (260)
T ss_pred             CCcEEEEccccC
Confidence            799999999875

>PRK06046 alanine dehydrogenase; Validated

Probab=97.50  E-value=0.00039  Score=72.02  Aligned_cols=113  Identities=19%  Similarity=0.207  Sum_probs=75.7

Q ss_pred             CcEEEEEcCchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHHcCc----ccccccccccCCCCceEEEEcCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~~----~~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      -+++.|+|+|++|+..+.++.. .++ +|.+++|+.++++++++++...    ....+++++ ... +|+|++|||.. .
T Consensus       129 ~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~-aDiVv~aTps~-~  205 (326)
T PRK06046        129 SKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEE-ACD-CDILVTTTPSR-K  205 (326)
T ss_pred             CCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHH-Hhh-CCEEEEecCCC-C
Confidence            4789999999999999999885 466 8999999999999999887421    112334444 334 89999999853 2


Q ss_pred             CCCCCCCCCccccCCCCEEEEE-ecCCChhHHHHHHHHCCCeEeccHH
Q 009464          458 PKVDETPIPKHALGHYALVFDA-VYTPKITRLLREAEESGATIVSGLE  504 (534)
Q Consensus       458 ~~~~~~~i~~~~l~~~~~v~Dv-~y~p~~T~ll~~A~~~G~~ii~Gl~  504 (534)
                      |     -+..+|++++..|.-+ .|.|...++-.+.-++.-.+++-.+
T Consensus       206 P-----~~~~~~l~~g~hV~~iGs~~p~~~El~~~~~~~a~vvvD~~~  248 (326)
T PRK06046        206 P-----VVKAEWIKEGTHINAIGADAPGKQELDPEILLRAKVVVDDME  248 (326)
T ss_pred             c-----EecHHHcCCCCEEEecCCCCCccccCCHHHHhCCcEEECCHH
Confidence            2     1456778777765555 3556544444443333334556544

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.50  E-value=0.00017  Score=60.48  Aligned_cols=88  Identities=30%  Similarity=0.350  Sum_probs=58.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCC---CeEEEE-eCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKG---ARVVIA-NRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G---~~v~i~-~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      ++.|+|+|.+|.+++..|.+.|   .+|+++ +|+.+++++++++++...... +..+ .....|+||.|++....+   
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~-~~~~advvilav~p~~~~---   75 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-DNEE-AAQEADVVILAVKPQQLP---   75 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-EHHH-HHHHTSEEEE-S-GGGHH---
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-ChHH-hhccCCEEEEEECHHHHH---
Confidence            4678899999999999999999   699965 999999999999987443221 1112 223579999998643221   


Q ss_pred             CCCCCc--cccCCCCEEEEEe
Q 009464          462 ETPIPK--HALGHYALVFDAV  480 (534)
Q Consensus       462 ~~~i~~--~~l~~~~~v~Dv~  480 (534)
                        ++..  ..+.+..+++|+.
T Consensus        76 --~v~~~i~~~~~~~~vis~~   94 (96)
T PF03807_consen   76 --EVLSEIPHLLKGKLVISIA   94 (96)
T ss_dssp             --HHHHHHHHHHTTSEEEEES
T ss_pred             --HHHHHHhhccCCCEEEEeC
Confidence              1111  1234556777764

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.49  E-value=0.00032  Score=68.59  Aligned_cols=75  Identities=31%  Similarity=0.447  Sum_probs=56.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      ++++++++|+|+ |++|++++..|++.|+.|++.+|+.++.+++...++...    .++.+   +.++      .....|
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            356789999999 899999999999999999999999998888876654321    12211   1110      235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||+++..
T Consensus        83 ~vi~~ag~~   91 (245)
T PRK12936         83 ILVNNAGIT   91 (245)
T ss_pred             EEEECCCCC
Confidence            999999865

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.00024  Score=70.21  Aligned_cols=72  Identities=24%  Similarity=0.344  Sum_probs=53.0

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCCCce
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~~~d  446 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+..   ..    .++.+   +.++      ..+..|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            478999999 8999999999999999999999999888887765531   11    12211   1110      235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||+++..
T Consensus        81 ~lI~~ag~~   89 (252)
T PRK07677         81 ALINNAAGN   89 (252)
T ss_pred             EEEECCCCC
Confidence            999998753

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.48  E-value=0.0017  Score=65.53  Aligned_cols=176  Identities=19%  Similarity=0.229  Sum_probs=111.2

Q ss_pred             EecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHHH
Q 009464          260 GIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAK  333 (534)
Q Consensus       260 ~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~  333 (534)
                      -++| +|-+++--- .-.+.++++|++.....++-    +++.+.++.+ .++.+.|+-|-.|+-..    +|+    -+
T Consensus        37 i~vg~d~as~~Yv~-~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~----id~----~~  107 (286)
T PRK14184         37 ILVGEDPASQVYVR-NKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKG----LDS----QR  107 (286)
T ss_pred             EEeCCChhHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCC----CCH----HH
Confidence            3456 444443332 22457899999998877764    3566666666 46789999999996422    211    11


Q ss_pred             HhcCeeEEEEeccCCeEEEEe-------------ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHH
Q 009464          334 SIGAVNCIIRRQSDGKLFGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKAL  399 (534)
Q Consensus       334 ~iGAvNTi~~~~~~g~l~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~grai  399 (534)
                      .+.+++.-.--  || ++-+|             .--.|+++-|+..           +.++.||+++|+|-+ -.|+.+
T Consensus       108 i~~~I~p~KDV--DG-l~~~N~g~l~~~~~~~~PcTp~av~~lL~~~-----------~i~l~Gk~vvViGrS~iVG~Pl  173 (286)
T PRK14184        108 CLELIDPAKDV--DG-FHPENMGRLALGLPGFRPCTPAGVMTLLERY-----------GLSPAGKKAVVVGRSNIVGKPL  173 (286)
T ss_pred             HHhccCcccCc--cc-CCHhhHHHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHH
Confidence            22222221100  11 11111             1135666655442           367899999999995 779999


Q ss_pred             HHHHHH----CCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCE
Q 009464          400 AYGAKA----KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL  475 (534)
Q Consensus       400 a~~L~~----~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~  475 (534)
                      +..|.+    .|+.|+++..+....++                  ....+|+||.+++.   |.    .+..++++++.+
T Consensus       174 a~lL~~~~~~~~AtVt~~hs~t~~l~~------------------~~~~ADIVI~AvG~---p~----li~~~~vk~Gav  228 (286)
T PRK14184        174 ALMLGAPGKFANATVTVCHSRTPDLAE------------------ECREADFLFVAIGR---PR----FVTADMVKPGAV  228 (286)
T ss_pred             HHHHhCCcccCCCEEEEEeCCchhHHH------------------HHHhCCEEEEecCC---CC----cCCHHHcCCCCE
Confidence            999998    78999998754332211                  22457999998853   22    367788999999


Q ss_pred             EEEEecCC
Q 009464          476 VFDAVYTP  483 (534)
Q Consensus       476 v~Dv~y~p  483 (534)
                      |+|+-.+.
T Consensus       229 VIDVGi~~  236 (286)
T PRK14184        229 VVDVGINR  236 (286)
T ss_pred             EEEeeeec
Confidence            99998765

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.00027  Score=70.02  Aligned_cols=75  Identities=27%  Similarity=0.315  Sum_probs=53.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++. ++.+.+.   ...    .++.+   +...      ..
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3578899999999 8999999999999999999999998765 4444432   111    12211   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||+++..
T Consensus        82 ~~id~vi~~ag~~   94 (258)
T PRK08628         82 GRIDGLVNNAGVN   94 (258)
T ss_pred             CCCCEEEECCccc
Confidence            5689999999864

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.00036  Score=68.47  Aligned_cols=74  Identities=36%  Similarity=0.380  Sum_probs=55.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~~  444 (534)
                      +++|+++|+|+ ||+|++++..|.+.|++|++++|+.++++++.+.+..   ..    .++.+.+   ++      ..+.
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999 8999999999999999999999999988887766531   11    1222111   10      1256


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      +|+|||+++..
T Consensus        85 id~vi~~ag~~   95 (250)
T PRK12939         85 LDGLVNNAGIT   95 (250)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.45  E-value=0.0003  Score=68.78  Aligned_cols=72  Identities=21%  Similarity=0.243  Sum_probs=49.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc------CCCCceEEEEc
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILANT  451 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~------~~~~~divVn~  451 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++.+|+.++..+..+..+...  .++.+   +.++      ..+..|++||+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            478999999 899999999999999999999998765433333322211  12211   1110      23568999999


Q ss_pred             CCCC
Q 009464          452 TSIG  455 (534)
Q Consensus       452 t~~g  455 (534)
                      ++..
T Consensus        82 ag~~   85 (236)
T PRK06483         82 ASDW   85 (236)
T ss_pred             Cccc
Confidence            9864

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.45  E-value=0.00042  Score=68.71  Aligned_cols=75  Identities=29%  Similarity=0.354  Sum_probs=55.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---c----cccccccccc---------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H----ALSLADLENF---------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~----~~~~~~~~~~---------~~~  443 (534)
                      .+++|+++|+|+ |++|++++..|++.|++|+++.|+.++.+.+.+.+..   .    .+++.+..++         ..+
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            467899999999 9999999999999999999999999888777665531   1    1222221110         234


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++|++++..
T Consensus        89 ~id~vi~~ag~~  100 (259)
T PRK08213         89 HVDILVNNAGAT  100 (259)
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.00042  Score=68.46  Aligned_cols=72  Identities=25%  Similarity=0.338  Sum_probs=52.4

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---c--c--cccccc---cccCCCCceEEEEcC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H--A--LSLADL---ENFNPEDGMILANTT  452 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~--~--~~~~~~---~~~~~~~~divVn~t  452 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++..|+.++++++.+....   .  .  .++.+.   ........|+|||++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            478999999 8999999999999999999999998887776654321   1  1  122221   111123789999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus        82 g~~   84 (257)
T PRK09291         82 GIG   84 (257)
T ss_pred             CcC
Confidence            865

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.00043  Score=67.78  Aligned_cols=74  Identities=23%  Similarity=0.255  Sum_probs=54.3

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCCCc
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPEDG  445 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~~~  445 (534)
                      ++|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.+.+..   ..    .++.+..   +.      ..+..
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3589999998 9999999999999999999999999888777665531   11    1222111   10      23468


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |+|||+++...
T Consensus        85 d~lv~~ag~~~   95 (241)
T PRK07454         85 DVLINNAGMAY   95 (241)
T ss_pred             CEEEECCCccC
Confidence            99999998653

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.44  E-value=0.00047  Score=73.51  Aligned_cols=69  Identities=30%  Similarity=0.381  Sum_probs=52.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ..+.|++++|+|.|.+|+.++..|...|++|+++++++.++.+.+.. +....+++   + ....+|++|.+|+
T Consensus       208 ~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-G~~v~~l~---e-al~~aDVVI~aTG  276 (425)
T PRK05476        208 VLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-GFRVMTME---E-AAELGDIFVTATG  276 (425)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-CCEecCHH---H-HHhCCCEEEECCC
Confidence            34689999999999999999999999999999999999887554332 33333333   2 2346899999885

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.00038  Score=70.09  Aligned_cols=71  Identities=24%  Similarity=0.367  Sum_probs=52.0

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----cccccc---ccc-----CCCCceEE
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF-----NPEDGMIL  448 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~---~~~-----~~~~~div  448 (534)
                      +|.++|+|+||+|++++..|. .|++|++++|+.++++++.+++..   +.    .++.+.   .++     ..+..|+|
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            578999999999999999996 799999999999888777665531   11    122111   110     23568999


Q ss_pred             EEcCCCC
Q 009464          449 ANTTSIG  455 (534)
Q Consensus       449 Vn~t~~g  455 (534)
                      ||++++.
T Consensus        81 i~nAG~~   87 (275)
T PRK06940         81 VHTAGVS   87 (275)
T ss_pred             EECCCcC
Confidence            9999875

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.43  E-value=0.00033  Score=69.44  Aligned_cols=74  Identities=34%  Similarity=0.420  Sum_probs=51.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----cccccc---ccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.. .+++.+++.   .+.    .++.+.   .++      ..+
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            467899999999 89999999999999999999999853 444544442   111    122221   110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++..
T Consensus        84 ~id~lv~nAg~~   95 (260)
T PRK12823         84 RIDVLINNVGGT   95 (260)
T ss_pred             CCeEEEECCccc
Confidence            689999999753

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0005  Score=66.79  Aligned_cols=71  Identities=23%  Similarity=0.278  Sum_probs=49.9

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc--ccccccc---cc----cCCCCceEEEEcCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--ALSLADL---EN----FNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~~~~~~~---~~----~~~~~~divVn~t~~  454 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.-+..  ..++.+.   .+    +.....|+||++++.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~   81 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI   81 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence            57999998 99999999999999999999999988766553321111  1222221   11    112368999999987


Q ss_pred             C
Q 009464          455 G  455 (534)
Q Consensus       455 g  455 (534)
                      .
T Consensus        82 ~   82 (225)
T PRK08177         82 S   82 (225)
T ss_pred             c
Confidence            5

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.42  E-value=0.00033  Score=71.74  Aligned_cols=76  Identities=28%  Similarity=0.379  Sum_probs=54.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHc---Ccc----ccccc---cccc-----CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLAD---LENF-----NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~---~~~----~~~~~---~~~~-----~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+ .++++++++++.   ...    .++.+   +.++     ..
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            5688999999999 799999999999999999998874 455666666552   111    12211   1110     13


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||+++..
T Consensus        88 g~iD~li~nAG~~  100 (306)
T PRK07792         88 GGLDIVVNNAGIT  100 (306)
T ss_pred             CCCCEEEECCCCC
Confidence            5789999999865

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.42  E-value=0.0004  Score=66.95  Aligned_cols=75  Identities=19%  Similarity=0.203  Sum_probs=49.9

Q ss_pred             cccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          378 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       378 ~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ...++++|+++|+|+|.+|...+..|.+.|++|+|++++.. ..++++......... ..+....+..+|+||.+|+
T Consensus         4 l~l~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~-~~~~~~~l~~adlViaaT~   79 (202)
T PRK06718          4 LMIDLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQ-KEFEPSDIVDAFLVIAATN   79 (202)
T ss_pred             eEEEcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEe-cCCChhhcCCceEEEEcCC
Confidence            34678999999999999999999999999999999998753 334444431111100 0111112445677777764

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.42  E-value=0.00028  Score=72.17  Aligned_cols=113  Identities=17%  Similarity=0.191  Sum_probs=73.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++.|+|.|-||.+++..|.+.|.+|+++||+.++++++.+.......+.+++.+ .....|+|+-++|.+..... ...+
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~-~~~~~dvIi~~vp~~~~~~v-~~~l   79 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQ-RLSAPRVVWVMVPHGIVDAV-LEEL   79 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHh-hcCCCCEEEEEcCchHHHHH-HHHH
Confidence            588999999999999999999999999999999998887642111222333333 33467999988875411000 0001


Q ss_pred             CccccCCCCEEEEEecC-CChh-HHHHHHHHCCCeEec
Q 009464          466 PKHALGHYALVFDAVYT-PKIT-RLLREAEESGATIVS  501 (534)
Q Consensus       466 ~~~~l~~~~~v~Dv~y~-p~~T-~ll~~A~~~G~~ii~  501 (534)
                       ...++++.+++|..-. |..| .+.+..+++|..+++
T Consensus        80 -~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vd  116 (298)
T TIGR00872        80 -APTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLD  116 (298)
T ss_pred             -HhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEe
Confidence             1235667899998654 3443 334455667766544

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.42  E-value=0.00056  Score=73.86  Aligned_cols=38  Identities=24%  Similarity=0.202  Sum_probs=34.2

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      +++|+++|+|+|++|++++..|++.|++|++++++...
T Consensus         3 ~~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~~~   40 (447)
T PRK02472          3 YQNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFS   40 (447)
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCCcc
Confidence            46899999999999999999999999999999987543

>PRK13243 glyoxylate reductase; Reviewed

Probab=97.41  E-value=0.00032  Score=72.90  Aligned_cols=70  Identities=24%  Similarity=0.314  Sum_probs=50.6

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ..+.||++.|+|.|.+|+.+|..|...|++|++++|+.+...  ....+...   .++.+ .+..+|+|+.++|..
T Consensus       146 ~~L~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~~~~---~~l~e-ll~~aDiV~l~lP~t  215 (333)
T PRK13243        146 YDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEA--EKELGAEY---RPLEE-LLRESDFVSLHVPLT  215 (333)
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcCCEe---cCHHH-HHhhCCEEEEeCCCC
Confidence            467899999999999999999999999999999999865422  22222222   22333 234578888888754

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.41  E-value=0.00053  Score=67.08  Aligned_cols=75  Identities=28%  Similarity=0.368  Sum_probs=54.9

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~~  444 (534)
                      +++++++|+|+ |++|++++..|++.|++|++++|+.++.+++.+++..   ..    .++.+   +.++      ..+.
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999 8999999999999999999999999888777665531   11    11111   1110      2346


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||+++...
T Consensus        85 id~vi~~ag~~~   96 (239)
T PRK07666         85 IDILINNAGISK   96 (239)
T ss_pred             ccEEEEcCcccc
Confidence            899999998753

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.00056  Score=67.89  Aligned_cols=72  Identities=28%  Similarity=0.260  Sum_probs=54.2

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-c----cccccc---cccc------C-CCCceEE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H----ALSLAD---LENF------N-PEDGMIL  448 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~----~~~~~~---~~~~------~-~~~~div  448 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.. .    .+++.+   +.++      . .+..|+|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            68999999 8999999999999999999999999999888776542 1    112222   1110      1 3567999


Q ss_pred             EEcCCCCC
Q 009464          449 ANTTSIGM  456 (534)
Q Consensus       449 Vn~t~~g~  456 (534)
                      ||+++...
T Consensus        82 i~~ag~~~   89 (260)
T PRK08267         82 FNNAGILR   89 (260)
T ss_pred             EECCCCCC
Confidence            99998653

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.00056  Score=67.75  Aligned_cols=75  Identities=27%  Similarity=0.321  Sum_probs=56.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---c--ccccccc---cc------CCCCc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---A--LSLADLE---NF------NPEDG  445 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~--~~~~~~~---~~------~~~~~  445 (534)
                      .+++++++|+|+ |++|+.++..|++.|++|++++|+.+..+++.+.+...   .  .++.+..   ++      ....+
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999 99999999999999999999999998888877665322   1  1222111   10      23468


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+||++++..
T Consensus        88 d~vi~~ag~~   97 (264)
T PRK12829         88 DVLVNNAGIA   97 (264)
T ss_pred             CEEEECCCCC
Confidence            9999998754

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.39  E-value=0.00045  Score=68.38  Aligned_cols=76  Identities=28%  Similarity=0.392  Sum_probs=56.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      ..+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++..   +.    .++.+   +.++      ..
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3467899999999 8999999999999999999999999888877665531   11    12221   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++||+++..
T Consensus        87 ~~~d~li~~ag~~   99 (255)
T PRK06113         87 GKVDILVNNAGGG   99 (255)
T ss_pred             CCCCEEEECCCCC
Confidence            5689999999864

>PRK05599 hypothetical protein; Provisional

Probab=97.38  E-value=0.00038  Score=68.83  Aligned_cols=70  Identities=19%  Similarity=0.213  Sum_probs=51.7

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---c-c----ccccccc---cc------CCCCce
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H-A----LSLADLE---NF------NPEDGM  446 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~-~----~~~~~~~---~~------~~~~~d  446 (534)
                      ++++|+|+ +|+|++++..|+ .|++|++++|+.++++++++++..   . .    +++.+.+   ++      ..+..|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            46899999 799999999998 599999999999999988877631   1 1    1222211   10      246789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++||+++..
T Consensus        80 ~lv~nag~~   88 (246)
T PRK05599         80 LAVVAFGIL   88 (246)
T ss_pred             EEEEecCcC
Confidence            999998864

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.00043  Score=67.48  Aligned_cols=70  Identities=21%  Similarity=0.263  Sum_probs=51.9

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc---CCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF---NPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~---~~~~~divVn~t~~g  455 (534)
                      +++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...  .++.+   +.++   .....|++||+++.+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            5899999 899999999999999999999999999888877654322  12221   1111   112579999998753

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.00057  Score=68.49  Aligned_cols=71  Identities=24%  Similarity=0.352  Sum_probs=52.1

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc-----cccccccc-------c--CCCCce
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA-----LSLADLEN-------F--NPEDGM  446 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~-----~~~~~~~~-------~--~~~~~d  446 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..   ..     .++.+.++       .  ..+..|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999 8999999999999999999999999888777665531   11     12221110       0  235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||+++.+
T Consensus        81 ~lv~~ag~~   89 (272)
T PRK07832         81 VVMNIAGIS   89 (272)
T ss_pred             EEEECCCCC
Confidence            999999865

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=97.38  E-value=0.00026  Score=68.07  Aligned_cols=76  Identities=26%  Similarity=0.292  Sum_probs=53.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc----c----cccc---cccc------cCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH----A----LSLA---DLEN------FNP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~----~----~~~~---~~~~------~~~  442 (534)
                      ++.||+++++|+ ||+|++.+.+|.++|+.+.++.-+.|..+..++--...    .    .++.   ++.+      ...
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            457999999998 99999999999999997766666667666665432211    1    1111   1111      046


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..||+||.+++..
T Consensus        82 g~iDIlINgAGi~~   95 (261)
T KOG4169|consen   82 GTIDILINGAGILD   95 (261)
T ss_pred             CceEEEEccccccc
Confidence            78999999998864

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.00031  Score=70.43  Aligned_cols=70  Identities=30%  Similarity=0.405  Sum_probs=50.8

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc------CCCCceEEEEcC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILANTT  452 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~------~~~~~divVn~t  452 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++... +...  .++.+   +.++      ..+..|+|||++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA-GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            68999999 8999999999999999999999998887766432 2111  12211   1110      235689999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +.+
T Consensus        81 g~~   83 (274)
T PRK05693         81 GYG   83 (274)
T ss_pred             CCC
Confidence            865

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.00022  Score=70.51  Aligned_cols=39  Identities=33%  Similarity=0.529  Sum_probs=35.8

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~   42 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE   42 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            467899999999 899999999999999999999998765

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.37  E-value=0.00054  Score=67.86  Aligned_cols=73  Identities=22%  Similarity=0.275  Sum_probs=53.1

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----ccccc---cccc------CCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LENF------NPED  444 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~---~~~~------~~~~  444 (534)
                      +|+++|+|+ |++|++++..|++.|++|++++|+.++.+++++.+..     ..    +++.+   +..+      ..+.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999 8999999999999999999999998888777655421     11    12211   1110      2356


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|++||+++...
T Consensus        82 id~vv~~ag~~~   93 (259)
T PRK12384         82 VDLLVYNAGIAK   93 (259)
T ss_pred             CCEEEECCCcCC
Confidence            899999997654

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.00046  Score=67.08  Aligned_cols=75  Identities=27%  Similarity=0.294  Sum_probs=53.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc--ccccc---cccc------CCCCc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA--LSLAD---LENF------NPEDG  445 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~--~~~~~---~~~~------~~~~~  445 (534)
                      .+++|+++|+|+ |++|++++..|++.|++|++++|+.++..+..+++..   ..  .++.+   +.+.      ..+..
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            356899999999 9999999999999999999999998876665544421   11  12211   1110      23468


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+||++++..
T Consensus        84 d~vi~~ag~~   93 (239)
T PRK12828         84 DALVNIAGAF   93 (239)
T ss_pred             CEEEECCccc
Confidence            9999998754

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.00053  Score=67.71  Aligned_cols=75  Identities=36%  Similarity=0.465  Sum_probs=52.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-c----cccccc---cccc------CCCCc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H----ALSLAD---LENF------NPEDG  445 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~----~~~~~~---~~~~------~~~~~  445 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+.. +++..+.. .    ..++.+   +.++      .....
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999 8999999999999999999999997653 33333321 1    112211   1110      23468


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |++|++++...
T Consensus        91 d~vi~~ag~~~  101 (255)
T PRK06841         91 DILVNSAGVAL  101 (255)
T ss_pred             CEEEECCCCCC
Confidence            99999998753

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.00037  Score=67.94  Aligned_cols=75  Identities=24%  Similarity=0.335  Sum_probs=55.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--cc----ccccc---cccc------CCCCc
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~~~---~~~~------~~~~~  445 (534)
                      +.+++++|+|+ |++|++++..|++.|++|++++|+.++.+++.+.+..  ..    .++.+   +.+.      ..+.+
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999 8999999999999999999999999988888776631  11    12211   1110      23468


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |+|||+++.+.
T Consensus        84 d~vi~~ag~~~   94 (237)
T PRK07326         84 DVLIANAGVGH   94 (237)
T ss_pred             CEEEECCCCCC
Confidence            99999987653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.36  E-value=0.00057  Score=77.72  Aligned_cols=77  Identities=27%  Similarity=0.422  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----c----cccccc---cccc------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----H----ALSLAD---LENF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~----~~~~~~---~~~~------  440 (534)
                      ..+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+..     .    ..++.+   +.++      
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999 8999999999999999999999999888777665531     1    112221   1110      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|+|||+++...
T Consensus       490 ~~g~iDilV~nAG~~~  505 (676)
T TIGR02632       490 AYGGVDIVVNNAGIAT  505 (676)
T ss_pred             hcCCCcEEEECCCCCC
Confidence            2357899999998653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.36  E-value=0.00058  Score=67.16  Aligned_cols=73  Identities=26%  Similarity=0.414  Sum_probs=52.2

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVGG---HA----LSLAD---LENF------NPED  444 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i-~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~~  444 (534)
                      .+++++|+|+ ||+|++++..|.+.|++|++ ..|+.++.+++++++..   ..    .++.+   +..+      ..+.
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999 89999999999999998765 58888888777766521   11    12111   1110      2346


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+|||+++.+
T Consensus        83 id~vi~~ag~~   93 (250)
T PRK08063         83 LDVFVNNAASG   93 (250)
T ss_pred             CCEEEECCCCC
Confidence            89999999765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.35  E-value=0.00055  Score=67.55  Aligned_cols=71  Identities=23%  Similarity=0.439  Sum_probs=53.1

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceEEEE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMILAN  450 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~divVn  450 (534)
                      ++++|+|+ ||+|++++..|.+.|++|++++|+.++++++...++...    .++.+   +.++      ..+..|++|+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            36899999 899999999999999999999999999888877654321    12221   1110      2346899999


Q ss_pred             cCCCC
Q 009464          451 TTSIG  455 (534)
Q Consensus       451 ~t~~g  455 (534)
                      +++..
T Consensus        81 ~ag~~   85 (248)
T PRK10538         81 NAGLA   85 (248)
T ss_pred             CCCcc
Confidence            99864

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.35  E-value=0.00064  Score=67.00  Aligned_cols=74  Identities=35%  Similarity=0.434  Sum_probs=54.6

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccccc---cc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLE---NF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~~---~~------~~~~  444 (534)
                      +++|+++|+|+ |++|++++..|.+.|++|++++|+.++.+++..++.   ...    .++.+..   ++      ..+.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35689999998 999999999999999999999999998887776652   111    1222111   10      2346


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+||++++..
T Consensus        82 ~d~vi~~a~~~   92 (258)
T PRK12429         82 VDILVNNAGIQ   92 (258)
T ss_pred             CCEEEECCCCC
Confidence            89999999764

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.35  E-value=0.00051  Score=69.02  Aligned_cols=75  Identities=32%  Similarity=0.373  Sum_probs=51.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH-------HHHHHHHHc---Ccc----ccccc---cccc--
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-------ARELAETVG---GHA----LSLAD---LENF--  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~-------a~~la~~~~---~~~----~~~~~---~~~~--  440 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+.       .+++++++.   ...    .++.+   +.++  
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            356899999999 899999999999999999999998653       334444432   111    12211   1110  


Q ss_pred             ----CCCCceEEEEcCCCC
Q 009464          441 ----NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ----~~~~~divVn~t~~g  455 (534)
                          ..+..|+|||+++..
T Consensus        83 ~~~~~~g~id~li~~ag~~  101 (273)
T PRK08278         83 KAVERFGGIDICVNNASAI  101 (273)
T ss_pred             HHHHHhCCCCEEEECCCCc
Confidence                235789999999865

>PLN00015 protochlorophyllide reductase

Probab=97.35  E-value=0.00024  Score=72.82  Aligned_cols=110  Identities=23%  Similarity=0.305  Sum_probs=68.4

Q ss_pred             EEEcC-chhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCCCceEEE
Q 009464          388 VVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPEDGMILA  449 (534)
Q Consensus       388 lVlGa-GG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~~~divV  449 (534)
                      +|+|+ +|+|++++..|++.| ++|++++|+.++++++++++..   ..    +++.+.+   ++      ..+..|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            58999 899999999999999 8999999999998888877642   11    1222211   10      235689999


Q ss_pred             EcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC---CeEec
Q 009464          450 NTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG---ATIVS  501 (534)
Q Consensus       450 n~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G---~~ii~  501 (534)
                      |++++... ......++.+.+   ..++++++...   ...+++.+++.+   .++|+
T Consensus        81 nnAG~~~~-~~~~~~~~~~~~---~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~  134 (308)
T PLN00015         81 CNAAVYLP-TAKEPTFTADGF---ELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLII  134 (308)
T ss_pred             ECCCcCCC-CCCcCCCCHHHH---HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence            99986421 101111222222   34677776533   234556665542   46654

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.00038  Score=69.71  Aligned_cols=75  Identities=23%  Similarity=0.302  Sum_probs=54.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----ccccc---cccc------C
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LENF------N  441 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~---~~~~------~  441 (534)
                      ++++|+++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+.+..     ..    .++.+   +.+.      .
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356899999999 8999999999999999999999998887777665421     11    12221   1110      1


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|++||+++..
T Consensus        84 ~~~~d~li~~ag~~   97 (276)
T PRK05875         84 HGRLHGVVHCAGGS   97 (276)
T ss_pred             cCCCCEEEECCCcc
Confidence            34689999999754

>PRK06823 ornithine cyclodeaminase; Validated

Probab=97.33  E-value=0.00097  Score=68.68  Aligned_cols=116  Identities=11%  Similarity=0.088  Sum_probs=76.4

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHcCc---ccccccccccCCCCceEEEEcCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~~---~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      -+++.|+|+|..|+..+.++... .. +|.|+||+.++++++++.+...   ....++.++ ....+|||+.+|+.. .|
T Consensus       128 ~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~-av~~ADIV~taT~s~-~P  205 (315)
T PRK06823        128 VSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAE-VAHAANLIVTTTPSR-EP  205 (315)
T ss_pred             CCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHH-HhcCCCEEEEecCCC-Cc
Confidence            47899999999999999998864 34 8999999999999998776422   212233444 456799999999743 22


Q ss_pred             CCCCCCCCccccCCCCEEEEE-ecCCChhHHHHHHHHCC-CeEeccHHHH
Q 009464          459 KVDETPIPKHALGHYALVFDA-VYTPKITRLLREAEESG-ATIVSGLEMF  506 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv-~y~p~~T~ll~~A~~~G-~~ii~Gl~ml  506 (534)
                           -+..+|++++..+.-+ .|.|...++-...-++. ..+++-.+..
T Consensus       206 -----~~~~~~l~~G~hi~~iGs~~p~~~Eld~~~l~~a~~vvvD~~~~~  250 (315)
T PRK06823        206 -----LLQAEDIQPGTHITAVGADSPGKQELDAELVARADKILVDSIAQC  250 (315)
T ss_pred             -----eeCHHHcCCCcEEEecCCCCcccccCCHHHHhhCCEEEECCHHHH
Confidence                 1456788887765555 25565433333222222 2345655443

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0005  Score=68.37  Aligned_cols=75  Identities=32%  Similarity=0.426  Sum_probs=54.1

Q ss_pred             ccCCcEEEEEcC-c-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----C-cc----ccccc---cccc------
Q 009464          381 ALAGKLFVVIGA-G-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG----G-HA----LSLAD---LENF------  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-G-G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~-~~----~~~~~---~~~~------  440 (534)
                      .+++|+++|+|+ | |+|++++..|++.|++|++.+|+.++.++..+.+.    . ..    .++.+   +..+      
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            356899999998 6 89999999999999999999999888776655442    1 11    12211   1110      


Q ss_pred             CCCCceEEEEcCCCC
Q 009464          441 NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ~~~~~divVn~t~~g  455 (534)
                      ..+..|+|||+++..
T Consensus        94 ~~g~id~li~~ag~~  108 (262)
T PRK07831         94 RLGRLDVLVNNAGLG  108 (262)
T ss_pred             HcCCCCEEEECCCCC
Confidence            235689999999864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.32  E-value=0.00052  Score=67.39  Aligned_cols=73  Identities=23%  Similarity=0.344  Sum_probs=53.3

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCCc
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~~  445 (534)
                      ++|+++|+|+ |++|++++..|.+.|++|++++|+.++.+++.+.+.   ...    .++.+   +.++      .....
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999 899999999999999999999999988877765542   111    11111   1110      23468


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |++|++++..
T Consensus        82 d~vi~~ag~~   91 (250)
T TIGR03206        82 DVLVNNAGWD   91 (250)
T ss_pred             CEEEECCCCC
Confidence            9999999753

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.31  E-value=0.0016  Score=58.92  Aligned_cols=79  Identities=20%  Similarity=0.210  Sum_probs=62.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .+++||+++|+|. .-.|+.++..|.+.|+.|++++++...+++                  ....+|+||.+++..  +
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~------------------~v~~ADIVvsAtg~~--~   83 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS------------------KVHDADVVVVGSPKP--E   83 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH------------------HHhhCCEEEEecCCC--C
Confidence            5789999999999 588999999999999999999864322211                  234589999998753  1


Q ss_pred             CCCCCCCCccccCCCCEEEEEecCC
Q 009464          459 KVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                           .+..+|++++.+++|+-.+.
T Consensus        84 -----~i~~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          84 -----KVPTEWIKPGATVINCSPTK  103 (140)
T ss_pred             -----ccCHHHcCCCCEEEEcCCCc
Confidence                 27789999999999887654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.31  E-value=0.00059  Score=67.18  Aligned_cols=48  Identities=25%  Similarity=0.461  Sum_probs=42.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG  428 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~  428 (534)
                      .+++|+++|+|+ |++|.+++..|++.|++|++++|+.++++++.+++.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~   57 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIE   57 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Confidence            457899999999 899999999999999999999999988877766653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.31  E-value=0.00067  Score=66.59  Aligned_cols=74  Identities=24%  Similarity=0.330  Sum_probs=54.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~~  444 (534)
                      +++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..   +.    .++.+   +.++      ..+.
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56889999999 9999999999999999999999999888777665531   11    12111   1110      1246


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|.||++++..
T Consensus        83 id~vi~~ag~~   93 (253)
T PRK08217         83 LNGLINNAGIL   93 (253)
T ss_pred             CCEEEECCCcc
Confidence            89999999854

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.00051  Score=77.73  Aligned_cols=76  Identities=26%  Similarity=0.392  Sum_probs=57.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .++.+   +.++      ..+
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            577899999999 8999999999999999999999999998888776531   11    12221   1110      235


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|++||+++.+.
T Consensus       448 ~id~li~~Ag~~~  460 (657)
T PRK07201        448 HVDYLVNNAGRSI  460 (657)
T ss_pred             CCCEEEECCCCCC
Confidence            6899999998753

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.00048  Score=68.50  Aligned_cols=73  Identities=15%  Similarity=0.124  Sum_probs=51.7

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCC-CeEEEEeCCHHH-HHHHHHHHcC----c--c--ccccccc-------cc-CCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDR-ARELAETVGG----H--A--LSLADLE-------NF-NPE  443 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G-~~v~i~~R~~~~-a~~la~~~~~----~--~--~~~~~~~-------~~-~~~  443 (534)
                      .+++++|+|+ ||+|++++..|++.| ++|++++|+.++ .+++++++..    .  .  .++.+.+       +. ..+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            3679999999 899999999999996 799999999886 6766665521    1  1  1221111       10 124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++..
T Consensus        87 ~id~li~~ag~~   98 (253)
T PRK07904         87 DVDVAIVAFGLL   98 (253)
T ss_pred             CCCEEEEeeecC
Confidence            789999988764

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.00032  Score=69.59  Aligned_cols=73  Identities=30%  Similarity=0.246  Sum_probs=50.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc----------ccccCCCCceEE
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD----------LENFNPEDGMIL  448 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~----------~~~~~~~~~div  448 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.  ....+.....++.+          +.+ ..+..|+|
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~v   81 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LPEGVEFVAADLTTAEGCAAVARAVLE-RLGGVDIL   81 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cCCceeEEecCCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3578899999999 8999999999999999999999986542  11111000112211          111 24568999


Q ss_pred             EEcCCCC
Q 009464          449 ANTTSIG  455 (534)
Q Consensus       449 Vn~t~~g  455 (534)
                      ||+++..
T Consensus        82 i~~ag~~   88 (260)
T PRK06523         82 VHVLGGS   88 (260)
T ss_pred             EECCccc
Confidence            9999854

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.00073  Score=66.87  Aligned_cols=72  Identities=26%  Similarity=0.339  Sum_probs=53.8

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-----cccccccccc---------CCCCceEE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----ALSLADLENF---------NPEDGMIL  448 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-----~~~~~~~~~~---------~~~~~div  448 (534)
                      +|+++|+|+ |++|++++..|++.|++|++++|+.++++.+.+.+...     ..++.+.+++         ..+.+|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            478999999 89999999999999999999999999988887765321     1122221110         12458999


Q ss_pred             EEcCCCC
Q 009464          449 ANTTSIG  455 (534)
Q Consensus       449 Vn~t~~g  455 (534)
                      |++++..
T Consensus        82 i~~ag~~   88 (257)
T PRK07074         82 VANAGAA   88 (257)
T ss_pred             EECCCCC
Confidence            9999764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.29  E-value=0.00067  Score=67.43  Aligned_cols=75  Identities=29%  Similarity=0.403  Sum_probs=52.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHc---Ccc----ccccccc---cc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLADLE---NF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~---~~~----~~~~~~~---~~------~~  442 (534)
                      ++++|+++|+|+ ||+|++++..|+++|++|++..|+ .+..+.+.+.+.   ...    .++.+..   ++      ..
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467899999999 899999999999999998888884 445555555442   111    1222211   10      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++||+++..
T Consensus        84 g~id~lv~~ag~~   96 (261)
T PRK08936         84 GTLDVMINNAGIE   96 (261)
T ss_pred             CCCCEEEECCCCC
Confidence            5689999999864

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.00073  Score=67.83  Aligned_cols=72  Identities=29%  Similarity=0.388  Sum_probs=53.8

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceEEE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMILA  449 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~divV  449 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+.+....    .++.+   +.++      ..+.+|++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999 899999999999999999999999998887766553221    12211   1110      235689999


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      |+++..
T Consensus        83 ~~ag~~   88 (275)
T PRK08263         83 NNAGYG   88 (275)
T ss_pred             ECCCCc
Confidence            999865

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.00059  Score=67.38  Aligned_cols=45  Identities=33%  Similarity=0.434  Sum_probs=37.8

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHH
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETV  427 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~  427 (534)
                      ++|+++|+|+ ||+|++++..|++.|++|++.. |+.++.+++..++
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~   49 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI   49 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence            5789999999 8999999999999999998864 6667776666554

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.00081  Score=67.23  Aligned_cols=72  Identities=17%  Similarity=0.256  Sum_probs=53.0

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----cccccc---ccc------CCCCceE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPEDGMI  447 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~---~~~------~~~~~di  447 (534)
                      ++++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+..   ..    .++.+.   .++      ....+|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999 8999999999999999999999999988887665531   11    122111   110      2356899


Q ss_pred             EEEcCCCCC
Q 009464          448 LANTTSIGM  456 (534)
Q Consensus       448 vVn~t~~g~  456 (534)
                      |||+++...
T Consensus        81 lI~~ag~~~   89 (270)
T PRK05650         81 IVNNAGVAS   89 (270)
T ss_pred             EEECCCCCC
Confidence            999998653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.28  E-value=0.00064  Score=66.67  Aligned_cols=74  Identities=31%  Similarity=0.355  Sum_probs=53.5

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---c----cccccc---ccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---A----LSLADL---ENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~----~~~~~~---~~~------~~~~  444 (534)
                      +.+|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+++...+...   .    .++.+.   .++      ..+.
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46789999998 89999999999999999999999988777666554321   1    122211   110      2246


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      +|+||++++..
T Consensus        84 ~d~vi~~ag~~   94 (251)
T PRK12826         84 LDILVANAGIF   94 (251)
T ss_pred             CCEEEECCCCC
Confidence            89999998654

>PRK06128 oxidoreductase; Provisional

Probab=97.27  E-value=0.00054  Score=69.89  Aligned_cols=75  Identities=24%  Similarity=0.296  Sum_probs=51.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH--HHHHHHHHHc---Ccc----ccccc---cccc------C
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD--RARELAETVG---GHA----LSLAD---LENF------N  441 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~--~a~~la~~~~---~~~----~~~~~---~~~~------~  441 (534)
                      .+++|++||+|+ ||+|++++..|++.|++|++..|+.+  ..+++.+.+.   .+.    +++.+   +.++      .
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999 89999999999999999988876543  3444444432   111    12221   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||+++..
T Consensus       132 ~g~iD~lV~nAg~~  145 (300)
T PRK06128        132 LGGLDILVNIAGKQ  145 (300)
T ss_pred             hCCCCEEEECCccc
Confidence            35789999999864

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=97.27  E-value=0.0013  Score=60.77  Aligned_cols=80  Identities=26%  Similarity=0.221  Sum_probs=53.9

Q ss_pred             cccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          380 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       380 ~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .++.||+++|+|.+ -.|+.++..|.+.|+.|+++....+..++                  ....+|+||.++|..   
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~------------------~~~~ADIVVsa~G~~---   90 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE------------------ITRRADIVVSAVGKP---   90 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH------------------HHTTSSEEEE-SSST---
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc------------------eeeeccEEeeeeccc---
Confidence            57899999999996 58999999999999999998765432222                  123579999988742   


Q ss_pred             CCCCCCCCccccCCCCEEEEEecCCC
Q 009464          459 KVDETPIPKHALGHYALVFDAVYTPK  484 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~y~p~  484 (534)
                      .    .+..++++++.+|+|+-.+..
T Consensus        91 ~----~i~~~~ik~gavVIDvG~~~~  112 (160)
T PF02882_consen   91 N----LIKADWIKPGAVVIDVGINYV  112 (160)
T ss_dssp             T-----B-GGGS-TTEEEEE--CEEE
T ss_pred             c----ccccccccCCcEEEecCCccc
Confidence            1    367889999999999987644

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.00078  Score=67.52  Aligned_cols=72  Identities=22%  Similarity=0.348  Sum_probs=53.3

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----cccccc---ccc------CCCCceEEEE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGMILAN  450 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~~---~~~------~~~~~divVn  450 (534)
                      |+++|+|+ |++|++++..|++.|++|+++.|+.++.+++.+..+...    .++.+.   .++      ..+..|+|||
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            68999999 999999999999999999999999988887766543221    222221   110      2356899999


Q ss_pred             cCCCCC
Q 009464          451 TTSIGM  456 (534)
Q Consensus       451 ~t~~g~  456 (534)
                      +++...
T Consensus        83 ~ag~~~   88 (276)
T PRK06482         83 NAGYGL   88 (276)
T ss_pred             CCCCCC
Confidence            998653

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.26  E-value=0.0017  Score=70.82  Aligned_cols=46  Identities=26%  Similarity=0.314  Sum_probs=38.6

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      .+.+|+++|+|.||+|++++..|.+.|++|++++|+.....++.+.
T Consensus        12 ~~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~   57 (473)
T PRK00141         12 QELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEV   57 (473)
T ss_pred             cccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHh
Confidence            4678899999999999999999999999999999987655444333

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=97.26  E-value=0.00058  Score=69.94  Aligned_cols=111  Identities=24%  Similarity=0.211  Sum_probs=72.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc-ccccccccCCCCceEEEEcCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDETP  464 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~  464 (534)
                      ++.|+|.|-||.+++..|.+.|.+|+++||+.++.+++.+ .+.... +.+++.+ .....|+|+.+.+....  ... -
T Consensus         2 ~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~-~g~~~~~~~~e~~~-~~~~~dvvi~~v~~~~~--~~~-v   76 (301)
T PRK09599          2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAE-EGATGADSLEELVA-KLPAPRVVWLMVPAGEI--TDA-T   76 (301)
T ss_pred             EEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCeecCCHHHHHh-hcCCCCEEEEEecCCcH--HHH-H
Confidence            5889999999999999999999999999999999988754 232221 2223222 12236888887764311  000 0


Q ss_pred             CC--ccccCCCCEEEEEecC-CChh-HHHHHHHHCCCeEec
Q 009464          465 IP--KHALGHYALVFDAVYT-PKIT-RLLREAEESGATIVS  501 (534)
Q Consensus       465 i~--~~~l~~~~~v~Dv~y~-p~~T-~ll~~A~~~G~~ii~  501 (534)
                      +.  ...++++.+++|+.-. |..+ .+.+.++++|+.+++
T Consensus        77 ~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~d  117 (301)
T PRK09599         77 IDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVD  117 (301)
T ss_pred             HHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEe
Confidence            11  1235667889999643 4444 455667788887654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.25  E-value=0.00074  Score=66.85  Aligned_cols=74  Identities=24%  Similarity=0.369  Sum_probs=49.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHcCcc--ccccc---cccc------CCCCceE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGGHA--LSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~~~~--~~~~~---~~~~------~~~~~di  447 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++..|+ .+.++++... +...  .++.+   +.++      ..+..|+
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-CCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            457899999999 899999999999999998887554 4444444332 1111  12211   1110      2357899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      |||+++..
T Consensus        83 li~~ag~~   90 (255)
T PRK06463         83 LVNNAGIM   90 (255)
T ss_pred             EEECCCcC
Confidence            99999864

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=97.24  E-value=0.0013  Score=68.13  Aligned_cols=114  Identities=18%  Similarity=0.127  Sum_probs=73.8

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHcCc---ccccccccccCCCCceEEEEcCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~~---~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .+++.|+|+|.+|+..+.++... .. +|.|++|+.++++++++++...   ....++..+ ...++|+|+.||+.. .|
T Consensus       128 ~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~e-av~~aDiVitaT~s~-~P  205 (325)
T TIGR02371       128 SSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPRE-AVEGCDILVTTTPSR-KP  205 (325)
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHH-HhccCCEEEEecCCC-Cc
Confidence            47899999999999988887654 34 8999999999999998876421   122334444 456789999999753 22


Q ss_pred             CCCCCCCCccccCCCCEEEEEe-cCCChhHHHHHHHHCCCeEeccHH
Q 009464          459 KVDETPIPKHALGHYALVFDAV-YTPKITRLLREAEESGATIVSGLE  504 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~-y~p~~T~ll~~A~~~G~~ii~Gl~  504 (534)
                      .     +..++++++..+.-+- |.|...++-...-++.-.+++-.+
T Consensus       206 ~-----~~~~~l~~g~~v~~vGs~~p~~~Eld~~~l~~a~v~vD~~~  247 (325)
T TIGR02371       206 V-----VKADWVSEGTHINAIGADAPGKQELDPEILKNAKIFVDDLE  247 (325)
T ss_pred             E-----ecHHHcCCCCEEEecCCCCcccccCCHHHHhcCcEEECCHH
Confidence            1     4567788877665553 455433332222222223455443

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.24  E-value=0.0033  Score=63.82  Aligned_cols=180  Identities=19%  Similarity=0.201  Sum_probs=111.3

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHH
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  332 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A  332 (534)
                      .-++| +|-+++-- ..-.+.++++|++.....++-+    ++.+.++.+ .++++.|+-|-.|+..    ++|+   . 
T Consensus        36 ii~vg~d~as~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~----~id~---~-  106 (295)
T PRK14174         36 VIIVGEDPASQVYV-RNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPK----QIDE---F-  106 (295)
T ss_pred             EEEeCCChHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH---H-
Confidence            34556 33333222 2335678999999988887753    566666666 4678999999999752    2221   1 


Q ss_pred             HHhcCeeEEEEe----c-cCCeEE-EE--e----ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHH
Q 009464          333 KSIGAVNCIIRR----Q-SDGKLF-GY--N----TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKAL  399 (534)
Q Consensus       333 ~~iGAvNTi~~~----~-~~g~l~-G~--N----TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~grai  399 (534)
                      +.+.+++.-.--    + +-|+++ |+  +    ---.|++.-|+..           +.++.||+++|+|.+ -.|+.+
T Consensus       107 ~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y-----------~i~l~Gk~vvViGrS~iVG~Pl  175 (295)
T PRK14174        107 AVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRY-----------NIETKGKHCVVVGRSNIVGKPM  175 (295)
T ss_pred             HHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHH
Confidence            011122221100    0 011221 11  0    1234555554431           357899999999995 779999


Q ss_pred             HHHHHH----CCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCE
Q 009464          400 AYGAKA----KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL  475 (534)
Q Consensus       400 a~~L~~----~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~  475 (534)
                      +.-|.+    .|+.|+++..+....++                  ....+|+||.++|..       ..+..++++++.+
T Consensus       176 a~lL~~~~~~~~atVt~~hs~t~~l~~------------------~~~~ADIvI~Avg~~-------~li~~~~vk~Gav  230 (295)
T PRK14174        176 ANLMLQKLKESNCTVTICHSATKDIPS------------------YTRQADILIAAIGKA-------RFITADMVKPGAV  230 (295)
T ss_pred             HHHHHhccccCCCEEEEEeCCchhHHH------------------HHHhCCEEEEecCcc-------CccCHHHcCCCCE
Confidence            999987    68899998865433222                  123579999988532       1367888999999


Q ss_pred             EEEEecCC
Q 009464          476 VFDAVYTP  483 (534)
Q Consensus       476 v~Dv~y~p  483 (534)
                      ++|+-.+.
T Consensus       231 VIDVgi~~  238 (295)
T PRK14174        231 VIDVGINR  238 (295)
T ss_pred             EEEeeccc
Confidence            99998664

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0013  Score=66.07  Aligned_cols=73  Identities=21%  Similarity=0.237  Sum_probs=52.8

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----c----cccccccc------cc--CCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----H----ALSLADLE------NF--NPED  444 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~----~~~~~~~~------~~--~~~~  444 (534)
                      ++|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.+....     .    ..++.+.+      +.  ..+.
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            3678999999 8999999999999999999999999887777654321     1    11222211      10  2356


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+||++++..
T Consensus        82 id~vv~~ag~~   92 (280)
T PRK06914         82 IDLLVNNAGYA   92 (280)
T ss_pred             eeEEEECCccc
Confidence            89999998754

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.22  E-value=0.0026  Score=69.38  Aligned_cols=38  Identities=34%  Similarity=0.323  Sum_probs=34.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ..+.+++++|+|+|++|+++|..|.+.|++|+++++..
T Consensus        12 ~~~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~   49 (480)
T PRK01438         12 SDWQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGD   49 (480)
T ss_pred             cCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            45678999999999999999999999999999998654

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.00056  Score=68.25  Aligned_cols=72  Identities=28%  Similarity=0.346  Sum_probs=49.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc---cccc------CCCCceEEEEcCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILANTTS  453 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~---~~~~------~~~~~divVn~t~  453 (534)
                      +++++|+|+ ||+|++++..|++.|++|++.+|+.++.+... .......++.+   +.++      ..+..|+|||+++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag   82 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP-GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG   82 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC-CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            578999999 89999999999999999999999977654321 11000112211   1110      2456899999998


Q ss_pred             CCC
Q 009464          454 IGM  456 (534)
Q Consensus       454 ~g~  456 (534)
                      ...
T Consensus        83 ~~~   85 (270)
T PRK06179         83 VGL   85 (270)
T ss_pred             CCC
Confidence            753

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.00097  Score=65.52  Aligned_cols=74  Identities=30%  Similarity=0.341  Sum_probs=50.9

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHc---Ccc----ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~---~~~----~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+ ||+|++++..|.+.|++|+++.|+. ++.+.+...+.   ...    .++.+   +.++      ..+
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            56789999999 9999999999999999999999975 34555554442   111    12211   1110      224


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++|++++..
T Consensus        84 ~~d~vi~~ag~~   95 (248)
T PRK07806         84 GLDALVLNASGG   95 (248)
T ss_pred             CCcEEEECCCCC
Confidence            689999998754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.20  E-value=0.00059  Score=66.51  Aligned_cols=74  Identities=35%  Similarity=0.451  Sum_probs=53.7

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccccc---cc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLE---NF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~~---~~------~~~~  444 (534)
                      +.+++++|+|+ |++|+.++..|++.|.+|++++|+.++.+.+...+.   .+.    .++.+..   +.      ....
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35689999999 999999999999999999999999988777666553   111    1222111   10      1345


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      +|.||++++..
T Consensus        83 id~vi~~ag~~   93 (246)
T PRK05653         83 LDILVNNAGIT   93 (246)
T ss_pred             CCEEEECCCcC
Confidence            79999998754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.20  E-value=0.00082  Score=65.94  Aligned_cols=73  Identities=19%  Similarity=0.222  Sum_probs=49.2

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVG---GHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i-~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~  444 (534)
                      ++|.++|+|+ ||+|++++..|+++|++|++ ..|+.++.++..+++.   ...    .++.+   +.++      ..+.
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999 89999999999999998777 4555555555544432   111    12221   1110      2356


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+|||+++..
T Consensus        82 id~li~~ag~~   92 (246)
T PRK12938         82 IDVLVNNAGIT   92 (246)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=97.19  E-value=0.0013  Score=69.96  Aligned_cols=69  Identities=30%  Similarity=0.423  Sum_probs=53.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ..+.|++|+|+|+|.+|+.++..+...|++|+++++++.+++. +..++......+   + ....+|++|.||+
T Consensus       198 ~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~-A~~~G~~~~~~~---e-~v~~aDVVI~atG  266 (413)
T cd00401         198 VMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQ-AAMEGYEVMTME---E-AVKEGDIFVTTTG  266 (413)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHH-HHhcCCEEccHH---H-HHcCCCEEEECCC
Confidence            4568999999999999999999999999999999999888654 445554333332   2 2345788888886

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0011  Score=65.79  Aligned_cols=72  Identities=33%  Similarity=0.454  Sum_probs=52.5

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCCCceE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPEDGMI  447 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~~~di  447 (534)
                      ++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+..   ..    .++.+..   ++      ..+..|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            67999999 9999999999999999999999998888777665531   11    1221111   10      1346899


Q ss_pred             EEEcCCCCC
Q 009464          448 LANTTSIGM  456 (534)
Q Consensus       448 vVn~t~~g~  456 (534)
                      |||+++...
T Consensus        82 vi~~ag~~~   90 (263)
T PRK06181         82 LVNNAGITM   90 (263)
T ss_pred             EEECCCccc
Confidence            999997654

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.18  E-value=0.00059  Score=65.74  Aligned_cols=72  Identities=21%  Similarity=0.292  Sum_probs=51.6

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC-------------------HHHHHHHHHHHcCc--ccc-----
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT-------------------YDRARELAETVGGH--ALS-----  433 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~-------------------~~~a~~la~~~~~~--~~~-----  433 (534)
                      .+.+++|+|+|+||+|..++..|+..|+ ++++++++                   ..|++.+++.+..-  .+.     
T Consensus        18 kl~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        18 RLLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             HhcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            3567899999999999999999999999 99999987                   45666666665420  011     


Q ss_pred             --c--ccccccCCCCceEEEEcCC
Q 009464          434 --L--ADLENFNPEDGMILANTTS  453 (534)
Q Consensus       434 --~--~~~~~~~~~~~divVn~t~  453 (534)
                        +  +++.+ .+.++|+||+|+.
T Consensus        98 ~~i~~~~~~~-~~~~~D~Vi~~~d  120 (202)
T TIGR02356        98 ERVTAENLEL-LINNVDLVLDCTD  120 (202)
T ss_pred             hcCCHHHHHH-HHhCCCEEEECCC
Confidence              1  11222 2456899998873

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.00087  Score=65.77  Aligned_cols=43  Identities=35%  Similarity=0.494  Sum_probs=38.7

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  427 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~  427 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~   45 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDL   45 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence            68999998 99999999999999999999999998887776654

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.0013  Score=64.54  Aligned_cols=42  Identities=29%  Similarity=0.409  Sum_probs=38.5

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      ++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence            57999999 9999999999999999999999999988887654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.18  E-value=0.001  Score=65.48  Aligned_cols=74  Identities=26%  Similarity=0.401  Sum_probs=51.7

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCC-c
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGGHA----LSLAD---LENF------NPED-G  445 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~-~  445 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++. .|+.++.+.+...++...    .++.+   +.++      ..+. .
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45789999999 899999999999999988775 557777777776654221    12211   1110      1233 8


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |++||+++..
T Consensus        83 d~li~~ag~~   92 (253)
T PRK08642         83 TTVVNNALAD   92 (253)
T ss_pred             eEEEECCCcc
Confidence            9999999753

>PRK08324 short chain dehydrogenase; Validated

Probab=97.16  E-value=0.00093  Score=76.18  Aligned_cols=76  Identities=36%  Similarity=0.464  Sum_probs=57.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--cc----ccccc---cccc------CCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPED  444 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~~~---~~~~------~~~~  444 (534)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++.+++.++.  ..    .++.+   +.++      ..+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            467899999997 9999999999999999999999999998888777643  11    12211   1110      2356


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||+++...
T Consensus       499 iDvvI~~AG~~~  510 (681)
T PRK08324        499 VDIVVSNAGIAI  510 (681)
T ss_pred             CCEEEECCCCCC
Confidence            899999998653

>PRK07985 oxidoreductase; Provisional

Probab=97.16  E-value=0.00091  Score=68.11  Aligned_cols=75  Identities=24%  Similarity=0.284  Sum_probs=51.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC--HHHHHHHHHHH---cCcc----cccccc---ccc------C
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT--YDRARELAETV---GGHA----LSLADL---ENF------N  441 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~--~~~a~~la~~~---~~~~----~~~~~~---~~~------~  441 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++.+|+  .++.+++.+.+   +...    .++.+.   .++      .
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999 899999999999999999998764  34455554433   2111    122211   110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|++||+++..
T Consensus       126 ~g~id~lv~~Ag~~  139 (294)
T PRK07985        126 LGGLDIMALVAGKQ  139 (294)
T ss_pred             hCCCCEEEECCCCC
Confidence            45689999998754

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0014  Score=65.16  Aligned_cols=73  Identities=23%  Similarity=0.366  Sum_probs=50.6

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH---cCcc----ccccc---cccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~----~~~~~---~~~~------~~~~  444 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.+ ..+..+.+   +.+.    .++.+   +.++      ..+.
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56799999999 89999999999999999999999875 33333332   1111    12211   1110      2456


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+||++++..
T Consensus        83 id~vi~~ag~~   93 (263)
T PRK08226         83 IDILVNNAGVC   93 (263)
T ss_pred             CCEEEECCCcC
Confidence            89999999864

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=97.15  E-value=0.00078  Score=69.40  Aligned_cols=100  Identities=19%  Similarity=0.200  Sum_probs=61.0

Q ss_pred             CcEEEEEcCchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHHcC---cccccccccccCCCCceEEEEcCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~---~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .+++.|+|+|..|+..+.++.. .+. +|.|++|+.++++++++.+..   .....++.++ ....+|+|+.||+.... 
T Consensus       128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~-av~~aDii~taT~s~~~-  205 (313)
T PF02423_consen  128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEE-AVRGADIIVTATPSTTP-  205 (313)
T ss_dssp             --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHH-HHTTSSEEEE----SSE-
T ss_pred             CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhh-hcccCCEEEEccCCCCC-
Confidence            3689999999999999999876 456 899999999999999999875   1222334444 45678999999986521 


Q ss_pred             CCCCCCCCccccCCCCEEEEEe-cCCChhHH
Q 009464          459 KVDETPIPKHALGHYALVFDAV-YTPKITRL  488 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~-y~p~~T~l  488 (534)
                         ..-+..+|++++..+.-+- |.|...++
T Consensus       206 ---~P~~~~~~l~~g~hi~~iGs~~~~~~El  233 (313)
T PF02423_consen  206 ---APVFDAEWLKPGTHINAIGSYTPGMREL  233 (313)
T ss_dssp             ---EESB-GGGS-TT-EEEE-S-SSTTBESB
T ss_pred             ---CccccHHHcCCCcEEEEecCCCCchhhc
Confidence               0125667888887666555 44654333

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=97.15  E-value=0.00086  Score=69.30  Aligned_cols=73  Identities=15%  Similarity=0.194  Sum_probs=52.0

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHcC-c--c--ccccc---ccccCCCCceEEEE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGG-H--A--LSLAD---LENFNPEDGMILAN  450 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G--~~v~i~~R~~~~a~~la~~~~~-~--~--~~~~~---~~~~~~~~~divVn  450 (534)
                      +++|+++|+|+ |++|++++..|++.|  .+|++++|+..+...+...+.. .  .  .++.+   +.+ ....+|+|||
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~-~~~~iD~Vih   80 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTR-ALRGVDYVVH   80 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHH-HHhcCCEEEE
Confidence            35789999999 999999999999986  5899999987766555555432 1  1  12222   222 2346899999


Q ss_pred             cCCCC
Q 009464          451 TTSIG  455 (534)
Q Consensus       451 ~t~~g  455 (534)
                      +++..
T Consensus        81 ~Ag~~   85 (324)
T TIGR03589        81 AAALK   85 (324)
T ss_pred             CcccC
Confidence            98764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.14  E-value=0.0011  Score=61.19  Aligned_cols=73  Identities=23%  Similarity=0.280  Sum_probs=49.1

Q ss_pred             cccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          378 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       378 ~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ...+++|++++|+|+|.+|..-+..|.+.|++|+|++.+  ..+++.+ ++........+.+..+..+|+||.+|.
T Consensus         7 ~~l~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~--~~~~l~~-l~~i~~~~~~~~~~dl~~a~lViaaT~   79 (157)
T PRK06719          7 LMFNLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPE--ICKEMKE-LPYITWKQKTFSNDDIKDAHLIYAATN   79 (157)
T ss_pred             eEEEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCc--cCHHHHh-ccCcEEEecccChhcCCCceEEEECCC
Confidence            456889999999999999999999999999999999643  3344433 221111111122213456788888774

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=97.14  E-value=0.0011  Score=67.76  Aligned_cols=96  Identities=22%  Similarity=0.270  Sum_probs=68.1

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHcCc----ccccccccccCCCCceEEEEcCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~~----~~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      -+++.|+|+|..|+..+.++... .. +|.|++|+.++++++++++...    ....++.++ ....+|+|+.+|+.. .
T Consensus       117 a~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~e-av~~aDIV~taT~s~-~  194 (301)
T PRK06407        117 VENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEA-ALRDADTITSITNSD-T  194 (301)
T ss_pred             CcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEecCCC-C
Confidence            47899999999999999998875 45 8999999999999999887532    222334444 456799999999843 2


Q ss_pred             CCCCCCCCCccccCCCCEEEEE-ecCCChh
Q 009464          458 PKVDETPIPKHALGHYALVFDA-VYTPKIT  486 (534)
Q Consensus       458 ~~~~~~~i~~~~l~~~~~v~Dv-~y~p~~T  486 (534)
                      |.     +..+|++++..|.-+ .|.|...
T Consensus       195 P~-----~~~~~l~pg~hV~aiGs~~p~~~  219 (301)
T PRK06407        195 PI-----FNRKYLGDEYHVNLAGSNYPNRR  219 (301)
T ss_pred             cE-----ecHHHcCCCceEEecCCCCCCcc
Confidence            21     456778776443333 2555533

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.14  E-value=0.00081  Score=65.73  Aligned_cols=74  Identities=38%  Similarity=0.486  Sum_probs=53.9

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLADLE---NF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~  443 (534)
                      +.+|+++|+|+ |++|+.++..|++.|++|++. +|+.++.+++...+..   ..    .++.+..   ++      ..+
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            56789999999 999999999999999999888 9998887777665432   11    1222111   10      124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+||++++..
T Consensus        83 ~id~vi~~ag~~   94 (247)
T PRK05565         83 KIDILVNNAGIS   94 (247)
T ss_pred             CCCEEEECCCcC
Confidence            689999998765

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.14  E-value=0.0025  Score=69.82  Aligned_cols=96  Identities=23%  Similarity=0.290  Sum_probs=61.5

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      +.+++++|+|.|++|++++..|...|++|+++++..++.+.+ ++.+.....-....+ .+..+|+||.+.++       
T Consensus        10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~~~~~~~~-~l~~~D~VV~SpGi-------   80 (488)
T PRK03369         10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATVSTSDAVQ-QIADYALVVTSPGF-------   80 (488)
T ss_pred             cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEEcCcchHh-HhhcCCEEEECCCC-------
Confidence            357899999999999999999999999999999876654432 222221110000001 12234555554432       


Q ss_pred             CCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHH
Q 009464          462 ETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFI  507 (534)
Q Consensus       462 ~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~  507 (534)
                                           |...|.++.|+++|++++.-++++.
T Consensus        81 ---------------------~~~~p~~~~a~~~gi~v~~~iel~~  105 (488)
T PRK03369         81 ---------------------RPTAPVLAAAAAAGVPIWGDVELAW  105 (488)
T ss_pred             ---------------------CCCCHHHHHHHHCCCcEeeHHHHhh
Confidence                                 2245667888888888887777653

>TIGR02415 23BDH acetoin reductases

Probab=97.13  E-value=0.0011  Score=65.31  Aligned_cols=71  Identities=24%  Similarity=0.345  Sum_probs=52.0

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCCCceE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPEDGMI  447 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~~~di  447 (534)
                      |+++|+|+ |++|++++..|.+.|++|++++|+.++++++.+.+..   ..    .++.+..   ++      ..+..|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999 8999999999999999999999998888777665531   11    1222111   10      2346899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      |||+++..
T Consensus        81 vi~~ag~~   88 (254)
T TIGR02415        81 MVNNAGVA   88 (254)
T ss_pred             EEECCCcC
Confidence            99999764

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12743 oxidoreductase; Provisional

Probab=97.13  E-value=0.0011  Score=65.62  Aligned_cols=72  Identities=28%  Similarity=0.263  Sum_probs=50.5

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHHc---Ccc----ccccccc---cc------CCCCc
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLADLE---NF------NPEDG  445 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~~---~~~----~~~~~~~---~~------~~~~~  445 (534)
                      +|+++|+|+ ||+|++++..|++.|++|+++. |+.++++++.+++.   ...    .++.+..   ++      ..+..
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999 8999999999999999998875 56677766665542   111    2222211   10      23568


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+||++++..
T Consensus        82 d~li~~ag~~   91 (256)
T PRK12743         82 DVLVNNAGAM   91 (256)
T ss_pred             CEEEECCCCC
Confidence            9999999865

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=97.13  E-value=0.0014  Score=67.00  Aligned_cols=109  Identities=17%  Similarity=0.239  Sum_probs=71.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++.|+|.|-||.+++..|++.|.+|+++||+.++++++.+. +...  ..+..+ .....|+||-+++....  ......
T Consensus         3 ~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~-g~~~--~~s~~~-~~~~aDvVi~~vp~~~~--~~~vl~   76 (296)
T PRK15461          3 AIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDK-GATP--AASPAQ-AAAGAEFVITMLPNGDL--VRSVLF   76 (296)
T ss_pred             eEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc-CCcc--cCCHHH-HHhcCCEEEEecCCHHH--HHHHHc
Confidence            68899999999999999999999999999999998887654 2111  112222 23457999988874320  000000


Q ss_pred             C----ccccCCCCEEEEEecCCCh--hHHHHHHHHCCCeEe
Q 009464          466 P----KHALGHYALVFDAVYTPKI--TRLLREAEESGATIV  500 (534)
Q Consensus       466 ~----~~~l~~~~~v~Dv~y~p~~--T~ll~~A~~~G~~ii  500 (534)
                      .    ...++++.+++|+.-.+..  ..+.+..+++|+.++
T Consensus        77 ~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~l  117 (296)
T PRK15461         77 GENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMM  117 (296)
T ss_pred             CcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEE
Confidence            0    1124567789999876443  355566677776543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.13  E-value=0.00027  Score=70.42  Aligned_cols=75  Identities=25%  Similarity=0.247  Sum_probs=49.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HHHcCccccccccccc------CCCCceEEEEcC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELA-ETVGGHALSLADLENF------NPEDGMILANTT  452 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la-~~~~~~~~~~~~~~~~------~~~~~divVn~t  452 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+... ..+..+..+.+++.++      ..+..|++||++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A   85 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNA   85 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            467899999999 89999999999999999999999876542110 0000111111111110      235689999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus        86 g~~   88 (266)
T PRK06171         86 GIN   88 (266)
T ss_pred             ccc
Confidence            864

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.12  E-value=0.0012  Score=65.28  Aligned_cols=74  Identities=24%  Similarity=0.336  Sum_probs=49.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH--HHHHHHHHHcCcc----ccccc---cccc------CCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD--RARELAETVGGHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~--~a~~la~~~~~~~----~~~~~---~~~~------~~~~  444 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+..  ..+++. ..+...    .++.+   +.++      ..+.
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            577899999999 89999999999999999998887542  122222 222111    12221   1110      2357


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|++||+++..
T Consensus        86 ~D~li~~Ag~~   96 (253)
T PRK08993         86 IDILVNNAGLI   96 (253)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=97.12  E-value=0.0011  Score=67.53  Aligned_cols=110  Identities=16%  Similarity=0.198  Sum_probs=72.7

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIP  466 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~  466 (534)
                      +.|+|.|-+|.+++..|++.|.+|++++|+.++++.+.+. +..  ...+..+ .....|+||.+.|....  ....-+.
T Consensus         2 IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~--~~~~~~~-~~~~aDivi~~vp~~~~--~~~v~~~   75 (291)
T TIGR01505         2 VGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GAV--TAETARQ-VTEQADVIFTMVPDSPQ--VEEVAFG   75 (291)
T ss_pred             EEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCc--ccCCHHH-HHhcCCEEEEecCCHHH--HHHHHcC
Confidence            6799999999999999999999999999999998877643 211  1122222 23468999998874310  0000011


Q ss_pred             c----cccCCCCEEEEEecCCChh--HHHHHHHHCCCeEecc
Q 009464          467 K----HALGHYALVFDAVYTPKIT--RLLREAEESGATIVSG  502 (534)
Q Consensus       467 ~----~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii~G  502 (534)
                      .    ..+.++.+++|....+..+  .+.+..+++|..+++.
T Consensus        76 ~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~~~~~~  117 (291)
T TIGR01505        76 ENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLDA  117 (291)
T ss_pred             cchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEec
Confidence            1    1235667899987654432  5666677778777664

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0012  Score=67.12  Aligned_cols=76  Identities=24%  Similarity=0.277  Sum_probs=52.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHc---Ccc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~---~~~----~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|+++|++|++++|+.+ ..+.+.+.+.   .+.    .++.+   +.++      .
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678899999999 89999999999999999999998753 3444444432   111    12211   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      ....|+|||+++..
T Consensus       122 ~~~iD~lI~~Ag~~  135 (290)
T PRK06701        122 LGRLDILVNNAAFQ  135 (290)
T ss_pred             cCCCCEEEECCccc
Confidence            34689999999864

>PRK08264 short chain dehydrogenase; Validated

Probab=97.11  E-value=0.00062  Score=66.48  Aligned_cols=69  Identities=30%  Similarity=0.479  Sum_probs=50.0

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc----cccc---ccccc--CCCCceEEEE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA----LSLA---DLENF--NPEDGMILAN  450 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~----~~~~---~~~~~--~~~~~divVn  450 (534)
                      +.+++++|+|+ |++|++++..|++.|+ +|+++.|+.+++++    .+...    .++.   ++.++  .....|+||+
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            46789999998 9999999999999999 99999999887654    21111    1221   11110  2345899999


Q ss_pred             cCCC
Q 009464          451 TTSI  454 (534)
Q Consensus       451 ~t~~  454 (534)
                      +++.
T Consensus        80 ~ag~   83 (238)
T PRK08264         80 NAGI   83 (238)
T ss_pred             CCCc
Confidence            9986

>PRK07589 ornithine cyclodeaminase; Validated

Probab=97.11  E-value=0.0019  Score=67.32  Aligned_cols=99  Identities=16%  Similarity=0.189  Sum_probs=69.0

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHcCc---ccccccccccCCCCceEEEEcCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~~---~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      -+++.|+|+|..|+..+.++... .. +|+|++|+.++++++++.+...   ....++.++ ...++|+|+.+|+.. . 
T Consensus       129 a~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~-av~~ADIIvtaT~S~-~-  205 (346)
T PRK07589        129 SRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAE-AVEGADIITTVTADK-T-  205 (346)
T ss_pred             CcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEecCCC-C-
Confidence            47899999999999999887764 45 8999999999999999888632   112234444 456799999999632 1 


Q ss_pred             CCCCCC-CCccccCCCCEEEEE-ecCCChhHH
Q 009464          459 KVDETP-IPKHALGHYALVFDA-VYTPKITRL  488 (534)
Q Consensus       459 ~~~~~~-i~~~~l~~~~~v~Dv-~y~p~~T~l  488 (534)
                         ..| +..+|++++..+.-+ .|.|...++
T Consensus       206 ---~~Pvl~~~~lkpG~hV~aIGs~~p~~~El  234 (346)
T PRK07589        206 ---NATILTDDMVEPGMHINAVGGDCPGKTEL  234 (346)
T ss_pred             ---CCceecHHHcCCCcEEEecCCCCCCcccC
Confidence               113 556788877654333 256654433

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=97.11  E-value=0.001  Score=61.11  Aligned_cols=68  Identities=26%  Similarity=0.342  Sum_probs=48.4

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      +++|++.|+|.|..|++.+..|.+.|++|++..|..++..+.|++-+-+..+.++..    ..+|+|+..+|
T Consensus         2 l~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv----~~aDvV~~L~P   69 (165)
T PF07991_consen    2 LKGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAV----KKADVVMLLLP   69 (165)
T ss_dssp             HCTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHH----HC-SEEEE-S-
T ss_pred             cCCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHH----hhCCEEEEeCC
Confidence            468999999999999999999999999999999998877777777665544444332    24677777665

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.10  E-value=0.0015  Score=70.17  Aligned_cols=91  Identities=29%  Similarity=0.258  Sum_probs=64.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||+++|+|.|.+|+++|..|...|++|+++++++.++..... .+....++++    ....+|+||.+++.  .  
T Consensus       250 ~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~~~~~lee----ll~~ADIVI~atGt--~--  320 (476)
T PTZ00075        250 VMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGYQVVTLED----VVETADIFVTATGN--K--  320 (476)
T ss_pred             CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCceeccHHH----HHhcCCEEEECCCc--c--
Confidence            5688999999999999999999999999999999999877644322 2333333333    23468999998752  1  


Q ss_pred             CCCCCCCcc---ccCCCCEEEEEecC
Q 009464          460 VDETPIPKH---ALGHYALVFDAVYT  482 (534)
Q Consensus       460 ~~~~~i~~~---~l~~~~~v~Dv~y~  482 (534)
                         ..+..+   .++++.+++++...
T Consensus       321 ---~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        321 ---DIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             ---cccCHHHHhccCCCcEEEEcCCC
Confidence               123322   34677788877654

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=97.09  E-value=0.00071  Score=68.35  Aligned_cols=118  Identities=20%  Similarity=0.145  Sum_probs=77.5

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH-HcCcccccccc-cccCCCCceEEEEcCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET-VGGHALSLADL-ENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~-~~~~~~~~~~~-~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      ++++|+|.|.||+.++..|.+.|..+.+++++...+...... ++.......+. .. ....+|+||-++|+......-.
T Consensus         4 ~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~-~~~~aD~VivavPi~~~~~~l~   82 (279)
T COG0287           4 MKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAE-AAAEADLVIVAVPIEATEEVLK   82 (279)
T ss_pred             cEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhh-hcccCCEEEEeccHHHHHHHHH
Confidence            689999999999999999999999998888887765444333 33211101111 12 3456899999999864321000


Q ss_pred             CCCCccccCCCCEEEEEecCCChhHHHHHHHHCCC---eEeccHHHHH
Q 009464          463 TPIPKHALGHYALVFDAVYTPKITRLLREAEESGA---TIVSGLEMFI  507 (534)
Q Consensus       463 ~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~---~ii~Gl~ml~  507 (534)
                       .+.. .++++.++.|+--  ..+..+..+++.+.   +++.|=.|+-
T Consensus        83 -~l~~-~l~~g~iv~Dv~S--~K~~v~~a~~~~~~~~~~~vg~HPM~G  126 (279)
T COG0287          83 -ELAP-HLKKGAIVTDVGS--VKSSVVEAMEKYLPGDVRFVGGHPMFG  126 (279)
T ss_pred             -Hhcc-cCCCCCEEEeccc--ccHHHHHHHHHhccCCCeeEecCCCCC
Confidence             0111 5678899999964  35777777777642   4777766663

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.09  E-value=0.00085  Score=68.86  Aligned_cols=117  Identities=17%  Similarity=0.183  Sum_probs=73.2

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      .+++.|+|+|.+|.+++..|.+.|.  +|++++|+.++.+.+. ..+.......+..+ ....+|+||.|+|........
T Consensus         6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~~~~~~-~~~~aDvViiavp~~~~~~v~   83 (307)
T PRK07502          6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVTTSAAE-AVKGADLVILCVPVGASGAVA   83 (307)
T ss_pred             CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceecCCHHH-HhcCCCEEEECCCHHHHHHHH
Confidence            3679999999999999999999995  8999999998776553 33321111122222 345689999999875321100


Q ss_pred             CCCCCccccCCCCEEEEEecCCChhHHHHHHHH---CCCeEeccHHHH
Q 009464          462 ETPIPKHALGHYALVFDAVYTPKITRLLREAEE---SGATIVSGLEMF  506 (534)
Q Consensus       462 ~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~---~G~~ii~Gl~ml  506 (534)
                       ..+ ...++++.+++|+...  ....++.+.+   .+.+++.+-.|.
T Consensus        84 -~~l-~~~l~~~~iv~dvgs~--k~~~~~~~~~~~~~~~~~v~~hPm~  127 (307)
T PRK07502         84 -AEI-APHLKPGAIVTDVGSV--KASVIAAMAPHLPEGVHFIPGHPLA  127 (307)
T ss_pred             -HHH-HhhCCCCCEEEeCccc--hHHHHHHHHHhCCCCCeEEeCCCCC
Confidence             001 1235666788887543  2344444433   355677776665

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0013  Score=65.16  Aligned_cols=74  Identities=27%  Similarity=0.365  Sum_probs=53.5

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~-v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+ ||+|+.++..|.+.|++ |++++|+.++.+.+.+.+.   ...    .++.+   +.++      ..+
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56899999999 89999999999999997 9999999887776655442   111    12211   1110      124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      .+|++||+++..
T Consensus        84 ~id~li~~ag~~   95 (260)
T PRK06198         84 RLDALVNAAGLT   95 (260)
T ss_pred             CCCEEEECCCcC
Confidence            689999999864

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.09  E-value=0.0014  Score=66.72  Aligned_cols=112  Identities=14%  Similarity=0.189  Sum_probs=73.2

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  464 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~  464 (534)
                      +++.|+|.|.+|.+++..|++.|.+|++++|+.++.+++.+. +...  .++..+ ...++|+||-++|....  .....
T Consensus         3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~~~--~~~~~e-~~~~~d~vi~~vp~~~~--~~~v~   76 (296)
T PRK11559          3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GAET--ASTAKA-VAEQCDVIITMLPNSPH--VKEVA   76 (296)
T ss_pred             ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCee--cCCHHH-HHhcCCEEEEeCCCHHH--HHHHH
Confidence            468999999999999999999999999999999988776542 2111  122222 23468999999875321  00000


Q ss_pred             CC----ccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEecc
Q 009464          465 IP----KHALGHYALVFDAVYTPKIT--RLLREAEESGATIVSG  502 (534)
Q Consensus       465 i~----~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii~G  502 (534)
                      ..    ...+.++.+++|+...+..+  .+.+..+++|..+++.
T Consensus        77 ~~~~~~~~~~~~g~iiid~st~~~~~~~~l~~~~~~~g~~~~d~  120 (296)
T PRK11559         77 LGENGIIEGAKPGTVVIDMSSIAPLASREIAAALKAKGIEMLDA  120 (296)
T ss_pred             cCcchHhhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCcEEEc
Confidence            00    12345678899998765433  5555566667665543

>PLN02494 adenosylhomocysteinase

Probab=97.08  E-value=0.0016  Score=69.92  Aligned_cols=69  Identities=32%  Similarity=0.377  Sum_probs=50.4

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ..+.||+++|+|.|.+|+.++..+...|++|++++++..++.... ..+....+++   + ....+|++|.+++
T Consensus       250 i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~vv~le---E-al~~ADVVI~tTG  318 (477)
T PLN02494        250 VMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQVLTLE---D-VVSEADIFVTTTG  318 (477)
T ss_pred             CccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCeeccHH---H-HHhhCCEEEECCC
Confidence            457899999999999999999999999999999999987654322 2222222232   2 2345788888765

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=97.07  E-value=0.00089  Score=72.83  Aligned_cols=112  Identities=22%  Similarity=0.216  Sum_probs=74.9

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH---cCc----ccccccccccCCCCceEEEEcCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGH----ALSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~----~~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      .++-++|-|-||+++|..|++.|++|+++||+.++++++.+..   +..    ..+.+++.+ .+..+|+|+-+.+.+..
T Consensus         7 ~~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~-~l~~~dvIi~~v~~~~a   85 (493)
T PLN02350          7 SRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVL-SIQKPRSVIILVKAGAP   85 (493)
T ss_pred             CCEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHh-cCCCCCEEEEECCCcHH
Confidence            3689999999999999999999999999999999999988742   211    112333333 34468999987764421


Q ss_pred             CCCCCCCCC--ccccCCCCEEEEEecC-CChh-HHHHHHHHCCCeEe
Q 009464          458 PKVDETPIP--KHALGHYALVFDAVYT-PKIT-RLLREAEESGATIV  500 (534)
Q Consensus       458 ~~~~~~~i~--~~~l~~~~~v~Dv~y~-p~~T-~ll~~A~~~G~~ii  500 (534)
                        .+.. +.  ...+.++.+++|..-. |..| .+.++++++|+.++
T Consensus        86 --V~~V-i~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fl  129 (493)
T PLN02350         86 --VDQT-IKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYL  129 (493)
T ss_pred             --HHHH-HHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence              0110 11  1235678899999876 4444 34445566776544

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0013  Score=64.95  Aligned_cols=46  Identities=37%  Similarity=0.498  Sum_probs=39.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHH
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETV  427 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i-~~R~~~~a~~la~~~  427 (534)
                      +++++++|+|+ ||+|++++..|.+.|++|++ ..|+.++.+++...+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~   51 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI   51 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            46789999999 89999999999999998876 479888877776655

>PRK06199 ornithine cyclodeaminase; Validated

Probab=97.07  E-value=0.0013  Score=69.58  Aligned_cols=91  Identities=19%  Similarity=0.214  Sum_probs=65.1

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHC--CC-eEEEEeCCHHHHHHHHHHHcCc------ccccccccccCCCCceEEEEcCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAK--GA-RVVIANRTYDRARELAETVGGH------ALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~--G~-~v~i~~R~~~~a~~la~~~~~~------~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      -+++.|+|+|..|+..+.+++..  .. +|.|++|+.++++++++++...      ....++.++ ....+|||+.||+.
T Consensus       155 a~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~e-av~~ADIVvtaT~s  233 (379)
T PRK06199        155 SKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEE-VVRGSDIVTYCNSG  233 (379)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHH-HHcCCCEEEEccCC
Confidence            47899999999999999998874  36 8999999999999999887532      112233444 45679999999875


Q ss_pred             CCC-CCCCCCC-CCccccCCCCEEE
Q 009464          455 GMQ-PKVDETP-IPKHALGHYALVF  477 (534)
Q Consensus       455 g~~-~~~~~~~-i~~~~l~~~~~v~  477 (534)
                      ... |.  ..| +..+|++++..+.
T Consensus       234 ~~~~~s--~~Pv~~~~~lkpG~hv~  256 (379)
T PRK06199        234 ETGDPS--TYPYVKREWVKPGAFLL  256 (379)
T ss_pred             CCCCCC--cCcEecHHHcCCCcEEe
Confidence            321 11  223 4566777766543

>PRK08328 hypothetical protein; Provisional

Probab=97.07  E-value=0.00057  Score=67.28  Aligned_cols=44  Identities=27%  Similarity=0.473  Sum_probs=36.9

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHH
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELA  424 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la  424 (534)
                      .+++++|+|+|+||.|..++..|+..|+ ++++++.+.-....+-
T Consensus        24 ~L~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~   68 (231)
T PRK08328         24 KLKKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLN   68 (231)
T ss_pred             HHhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhc
Confidence            3567899999999999999999999999 9999987765544443

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0018  Score=64.13  Aligned_cols=75  Identities=28%  Similarity=0.295  Sum_probs=51.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHc---Ccc----cccccc---ccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLADL---ENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~  442 (534)
                      ...+|+++|+|+ ||+|++++..|++.|++|+++.| +.++.+++.+.+.   ...    .++.+.   .++      ..
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            356789999999 89999999999999998877654 5666666665542   111    122211   110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+||++++..
T Consensus        86 ~~iD~vi~~ag~~   98 (258)
T PRK09134         86 GPITLLVNNASLF   98 (258)
T ss_pred             CCCCEEEECCcCC
Confidence            5689999999754

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.05  E-value=0.0024  Score=69.70  Aligned_cols=97  Identities=24%  Similarity=0.253  Sum_probs=67.0

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccc--c-----------c-----------
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA--D-----------L-----------  437 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~--~-----------~-----------  437 (534)
                      ..+.+|+|+|+|.+|..++..+...|++|++++++.++.+ .++.++.+...++  +           .           
T Consensus       163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle-~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAE-QVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            3478999999999999999999999999999999998865 4555775522111  0           0           


Q ss_pred             -cccCCCCceEEEEcCCCCCCCCCCCCCCC---ccccCCCCEEEEEecC
Q 009464          438 -ENFNPEDGMILANTTSIGMQPKVDETPIP---KHALGHYALVFDAVYT  482 (534)
Q Consensus       438 -~~~~~~~~divVn~t~~g~~~~~~~~~i~---~~~l~~~~~v~Dv~y~  482 (534)
                       .+ ....+|++|+|++....+.  +..+.   .+.++++.+++|+...
T Consensus       242 ~~~-~~~gaDVVIetag~pg~~a--P~lit~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        242 FAE-QAKEVDIIITTALIPGKPA--PKLITAEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             HHh-ccCCCCEEEECCCCCcccC--cchHHHHHHHhcCCCCEEEEEccC
Confidence             01 1246899999998643221  11121   2345778889999863

>PRK07775 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0018  Score=65.08  Aligned_cols=75  Identities=25%  Similarity=0.368  Sum_probs=54.0

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~  444 (534)
                      .+.|+++|+|+ |++|++++..|++.|++|+++.|+.++.+++...+.   .+.    .++.+   +.++      ..+.
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            45689999999 899999999999999999999999888777665542   111    12221   1110      2346


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|++|++++...
T Consensus        88 id~vi~~Ag~~~   99 (274)
T PRK07775         88 IEVLVSGAGDTY   99 (274)
T ss_pred             CCEEEECCCcCC
Confidence            899999998653

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.04  E-value=0.0027  Score=69.13  Aligned_cols=99  Identities=21%  Similarity=0.218  Sum_probs=67.6

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc-------------------------
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD-------------------------  436 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~-------------------------  436 (534)
                      ..+.+++|+|+|.+|+.++..+...|++|++++++.++.+ .++.++.+.+.++.                         
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle-~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKE-QVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            3467999999999999999999999999999999998755 44456654322211                         


Q ss_pred             ccccCCCCceEEEEcCCCCCCCCCCCCCCCc---cccCCCCEEEEEecCCC
Q 009464          437 LENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTPK  484 (534)
Q Consensus       437 ~~~~~~~~~divVn~t~~g~~~~~~~~~i~~---~~l~~~~~v~Dv~y~p~  484 (534)
                      +.+ ...++|++|+|+-+...+.  +..+..   ..++++.+++|+...+.
T Consensus       241 ~~e-~~~~~DIVI~TalipG~~a--P~Lit~emv~~MKpGsvIVDlA~d~G  288 (511)
T TIGR00561       241 FAA-QAKEVDIIITTALIPGKPA--PKLITEEMVDSMKAGSVIVDLAAEQG  288 (511)
T ss_pred             HHH-HhCCCCEEEECcccCCCCC--CeeehHHHHhhCCCCCEEEEeeeCCC
Confidence            111 2456999999984432221  111222   34677889999987543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=97.04  E-value=0.00085  Score=69.60  Aligned_cols=117  Identities=15%  Similarity=0.141  Sum_probs=77.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|+.++|+.+......+       ...++.+ .+..+|+|+.+.|..... 
T Consensus       142 ~~l~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~-------~~~~l~e-ll~~aDiVil~lP~t~~t-  212 (330)
T PRK12480        142 KPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLT-------YKDSVKE-AIKDADIISLHVPANKES-  212 (330)
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhh-------ccCCHHH-HHhcCCEEEEeCCCcHHH-
Confidence            3567899999999999999999999999999999999765322111       1122333 345689999998864210 


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMFI  507 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml~  507 (534)
                        ...+..   ..++++.+++++.-.+. ++.-+..|.+.|--.--|++.+-
T Consensus       213 --~~li~~~~l~~mk~gavlIN~aRG~~vd~~aL~~aL~~g~i~gaalDV~~  262 (330)
T PRK12480        213 --YHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYE  262 (330)
T ss_pred             --HHHHhHHHHhcCCCCcEEEEcCCccccCHHHHHHHHHcCCeeEEEEeccC
Confidence              011222   23467788888886655 56666777777644345555553

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=97.03  E-value=0.01  Score=58.28  Aligned_cols=133  Identities=19%  Similarity=0.203  Sum_probs=83.3

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEE-EEeC----------CHHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~-i~~R----------~~~~a~~la~  425 (534)
                      +.|...+++..+...       +.++++++++|.|.|.+|+.++..|.+.|++|+ |.+.          +.++..+..+
T Consensus        11 g~Gv~~~~~~~~~~~-------~~~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~   83 (227)
T cd01076          11 GRGVAYATREALKKL-------GIGLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKK   83 (227)
T ss_pred             hHHHHHHHHHHHHhc-------CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHH
Confidence            567777777655431       246789999999999999999999999999887 7777          6677666655


Q ss_pred             HHcCcccccc-----cccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEe
Q 009464          426 TVGGHALSLA-----DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV  500 (534)
Q Consensus       426 ~~~~~~~~~~-----~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii  500 (534)
                      +.+.- ..+.     +..++...++|++|-|+.-+.-   +...+  ..+ ...+|+.-.-+|.....-+.-+++|+.++
T Consensus        84 ~~g~l-~~~~~~~~~~~~~i~~~~~Dvlip~a~~~~i---~~~~~--~~l-~a~~I~egAN~~~t~~a~~~L~~rGi~~~  156 (227)
T cd01076          84 EHGSV-LGFPGAERITNEELLELDCDILIPAALENQI---TADNA--DRI-KAKIIVEAANGPTTPEADEILHERGVLVV  156 (227)
T ss_pred             hcCCc-ccCCCceecCCccceeecccEEEecCccCcc---CHHHH--hhc-eeeEEEeCCCCCCCHHHHHHHHHCCCEEE
Confidence            54311 0110     0111112368999999853321   11111  122 23577777767764344445577888776


Q ss_pred             ccH
Q 009464          501 SGL  503 (534)
Q Consensus       501 ~Gl  503 (534)
                      +-.
T Consensus       157 PD~  159 (227)
T cd01076         157 PDI  159 (227)
T ss_pred             ChH
Confidence            543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=97.02  E-value=0.0025  Score=63.77  Aligned_cols=113  Identities=20%  Similarity=0.262  Sum_probs=75.0

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      +.+++=.||-|-||.+++..|.+.|++|+++||+.++.+++.+.-..-..+..++.    +..|++|.+.|-...  ...
T Consensus        34 s~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVa----e~sDvvitmv~~~~~--v~~  107 (327)
T KOG0409|consen   34 SKTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVA----EDSDVVITMVPNPKD--VKD  107 (327)
T ss_pred             ccceeeEEeeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHH----hhcCEEEEEcCChHh--hHH
Confidence            46789999999999999999999999999999999999999876322222222332    357999877653211  111


Q ss_pred             CCCCc----cccCCCCEE-EEEecC-CC-hhHHHHHHHHCCCeEec
Q 009464          463 TPIPK----HALGHYALV-FDAVYT-PK-ITRLLREAEESGATIVS  501 (534)
Q Consensus       463 ~~i~~----~~l~~~~~v-~Dv~y~-p~-~T~ll~~A~~~G~~ii~  501 (534)
                      .-+..    ..+++.... +|+... |. .+.+-+.++.+|++.++
T Consensus       108 v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vD  153 (327)
T KOG0409|consen  108 VLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVD  153 (327)
T ss_pred             HhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEe
Confidence            11111    122344444 799875 33 34667777888887664

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.0018  Score=63.30  Aligned_cols=74  Identities=28%  Similarity=0.349  Sum_probs=50.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHc---Ccc----ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+ ||+|++++..|+++|++|+++.|+ .+..+++.+.+.   .+.    .++.+   +.++      ..+
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            56799999999 899999999999999988777654 444555555442   111    12211   1110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++..
T Consensus        83 ~id~vi~~ag~~   94 (245)
T PRK12937         83 RIDVLVNNAGVM   94 (245)
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=97.01  E-value=0.0017  Score=63.93  Aligned_cols=75  Identities=37%  Similarity=0.507  Sum_probs=51.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH--HHHHHHHHc----Ccc----ccccc-cc---cc------
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR--ARELAETVG----GHA----LSLAD-LE---NF------  440 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~--a~~la~~~~----~~~----~~~~~-~~---~~------  440 (534)
                      +++|+++|+|+ +|+|+++|..|++.|++|+++.|+.+.  ++.+.+...    ...    .++.+ ..   .+      
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            46799999999 699999999999999998888877553  344433332    111    22222 11   00      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|++||+++++.
T Consensus        83 ~~g~id~lvnnAg~~~   98 (251)
T COG1028          83 EFGRIDILVNNAGIAG   98 (251)
T ss_pred             HcCCCCEEEECCCCCC
Confidence            3466899999999864

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=97.01  E-value=0.0013  Score=67.31  Aligned_cols=111  Identities=23%  Similarity=0.178  Sum_probs=70.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccccccccCCCCceEEEEcCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDETP  464 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~  464 (534)
                      ++.|+|.|-||.+++..|.+.|.+|+++||+.++++++.+ .+... .+.+++.+ .....|+|+-+++....  ... -
T Consensus         2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~-~g~~~~~s~~~~~~-~~~~advVi~~vp~~~~--~~~-v   76 (299)
T PRK12490          2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGK-LGITARHSLEELVS-KLEAPRTIWVMVPAGEV--TES-V   76 (299)
T ss_pred             EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCeecCCHHHHHH-hCCCCCEEEEEecCchH--HHH-H
Confidence            5789999999999999999999999999999999888754 33221 12222222 12236889888774310  000 0


Q ss_pred             CC--ccccCCCCEEEEEecC-CCh-hHHHHHHHHCCCeEec
Q 009464          465 IP--KHALGHYALVFDAVYT-PKI-TRLLREAEESGATIVS  501 (534)
Q Consensus       465 i~--~~~l~~~~~v~Dv~y~-p~~-T~ll~~A~~~G~~ii~  501 (534)
                      +.  ...++++.+++|+.-. |.. ..+.+..+++|+.+++
T Consensus        77 ~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vd  117 (299)
T PRK12490         77 IKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVD  117 (299)
T ss_pred             HHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEe
Confidence            11  1234567899999653 433 3455556677876654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=97.00  E-value=0.0018  Score=64.66  Aligned_cols=71  Identities=27%  Similarity=0.270  Sum_probs=50.4

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHHcC----cc----ccccccc-------cc------C
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVGG----HA----LSLADLE-------NF------N  441 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~~~----~~----~~~~~~~-------~~------~  441 (534)
                      +.++|+|+ ||+|++++..|.+.|++|++.. |+.++++++++++..    ..    .++.+.+       +.      .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            47899999 8999999999999999998875 456777777666531    11    1222211       00      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||+++..
T Consensus        82 ~g~iD~lv~nAG~~   95 (267)
T TIGR02685        82 FGRCDVLVNNASAF   95 (267)
T ss_pred             cCCceEEEECCccC
Confidence            35789999999864

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=96.99  E-value=0.0012  Score=67.97  Aligned_cols=72  Identities=19%  Similarity=0.163  Sum_probs=49.5

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc--C---c--c--ccccc---ccccCCCCceEEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--G---H--A--LSLAD---LENFNPEDGMILA  449 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~--~---~--~--~~~~~---~~~~~~~~~divV  449 (534)
                      .+|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+.......  .   .  .  .++.+   +.+ ....+|+||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi   82 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFEL-AIDGCETVF   82 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHH-HHcCCCEEE
Confidence            3689999998 999999999999999999988888765544322211  0   1  1  12222   222 234689999


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      |+++..
T Consensus        83 h~A~~~   88 (325)
T PLN02989         83 HTASPV   88 (325)
T ss_pred             EeCCCC
Confidence            999754

>PRK09135 pteridine reductase; Provisional

Probab=96.99  E-value=0.0024  Score=62.51  Aligned_cols=73  Identities=25%  Similarity=0.222  Sum_probs=50.5

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHcC----c----cccccccccc---------CCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGG----H----ALSLADLENF---------NPE  443 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~~----~----~~~~~~~~~~---------~~~  443 (534)
                      ++++++|+|+ |++|+.++..|++.|++|++++|+ .++.+++...+..    .    ..++.+.+++         ...
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5689999999 899999999999999999998885 4555555544321    1    1122221110         234


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      .+|+||++++..
T Consensus        85 ~~d~vi~~ag~~   96 (249)
T PRK09135         85 RLDALVNNASSF   96 (249)
T ss_pred             CCCEEEECCCCC
Confidence            689999999764

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0017  Score=63.51  Aligned_cols=47  Identities=28%  Similarity=0.473  Sum_probs=42.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  427 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~  427 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l   50 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI   50 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence            357899999999 89999999999999999999999999888877665

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.97  E-value=0.00097  Score=67.16  Aligned_cols=125  Identities=15%  Similarity=0.182  Sum_probs=78.3

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc---------cc---ccc-------ccccCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA---------LS---LAD-------LENFNPED  444 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~---------~~---~~~-------~~~~~~~~  444 (534)
                      ++++|+|. .|+|+++|..+...|++|++..|+.++.+++++.++-..         .+   ++.       +.+ ....
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~-~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD-LEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh-ccCC
Confidence            68999988 799999999999999999999999999999998886211         11   111       111 2356


Q ss_pred             ceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChh---HHHHHHHHCCCeEeccHHHHHHHHHHHHHHhc
Q 009464          445 GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT---RLLREAEESGATIVSGLEMFIGQAYEQYERFT  518 (534)
Q Consensus       445 ~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T---~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwt  518 (534)
                      +|.+++|+|......  ....+...+   ...+|+||...--   ..++.++++.   ..|.=.++.|.+.++.++.
T Consensus       113 ~d~l~~cAG~~v~g~--f~~~s~~~v---~~~m~vNylgt~~v~~~~~~~mk~~~---~~g~I~~vsS~~a~~~i~G  181 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGL--FEDLSPEVV---EKLMDVNYLGTVNVAKAAARAMKKRE---HLGRIILVSSQLAMLGIYG  181 (331)
T ss_pred             cceEEEecCcccccc--cccCCHHHH---HHHHHhhhhhhHHHHHHHHHHhhccc---cCcEEEEehhhhhhcCccc
Confidence            899999998653221  112222223   4578999864422   2333333332   1222234555666666553

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=96.97  E-value=0.0028  Score=67.39  Aligned_cols=89  Identities=20%  Similarity=0.265  Sum_probs=58.7

Q ss_pred             eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcC-----------------chhHHHHHHHHHHCCCeEEEEeCC
Q 009464          354 NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-----------------GGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       354 NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGa-----------------GG~graia~~L~~~G~~v~i~~R~  416 (534)
                      --|..-++..+++.+..         .+++||+++|+|+                 |++|+++|.+|++.|++|++++++
T Consensus       167 ~~~~~~I~~~~~~~~~~---------~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~  237 (399)
T PRK05579        167 MAEPEEIVAAAERALSP---------KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGP  237 (399)
T ss_pred             CCCHHHHHHHHHHHhhh---------cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence            44566666666554431         3578999999998                 559999999999999999999887


Q ss_pred             HHHHHHHHHHHcCccccccc---c----cccCCCCceEEEEcCCCCC
Q 009464          417 YDRARELAETVGGHALSLAD---L----ENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       417 ~~~a~~la~~~~~~~~~~~~---~----~~~~~~~~divVn~t~~g~  456 (534)
                      .+ .+.   ..+....++.+   +    .+ ..+..|++|++++++.
T Consensus       238 ~~-~~~---~~~~~~~dv~~~~~~~~~v~~-~~~~~DilI~~Aav~d  279 (399)
T PRK05579        238 VN-LPT---PAGVKRIDVESAQEMLDAVLA-ALPQADIFIMAAAVAD  279 (399)
T ss_pred             cc-ccC---CCCcEEEccCCHHHHHHHHHH-hcCCCCEEEEcccccc
Confidence            52 110   00111122221   1    12 3467899999998864

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.96  E-value=0.002  Score=63.42  Aligned_cols=72  Identities=28%  Similarity=0.288  Sum_probs=52.7

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc-------cc--CCCCce
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE-------NF--NPEDGM  446 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~-------~~--~~~~~d  446 (534)
                      +|+++|+|+ |++|++++..|.++|++|++++|+.++.+++.+.+..   ..    .++.+.+       ..  .....|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            368999998 8999999999999999999999999888877765521   11    1222211       10  235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +||++++..
T Consensus        81 ~vi~~a~~~   89 (255)
T TIGR01963        81 ILVNNAGIQ   89 (255)
T ss_pred             EEEECCCCC
Confidence            999998754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.95  E-value=0.00095  Score=70.58  Aligned_cols=71  Identities=20%  Similarity=0.288  Sum_probs=52.0

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC-------------------HHHHHHHHHHHcC-----cccccc-
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT-------------------YDRARELAETVGG-----HALSLA-  435 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~-------------------~~~a~~la~~~~~-----~~~~~~-  435 (534)
                      +++++|+|+|+||+|..++..|+..|+ ++++++++                   ..|++.+++.+..     +..... 
T Consensus       133 l~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  212 (376)
T PRK08762        133 LLEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE  212 (376)
T ss_pred             HhcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            356789999999999999999999999 99999997                   5677777776631     111111 


Q ss_pred             -----cccccCCCCceEEEEcCC
Q 009464          436 -----DLENFNPEDGMILANTTS  453 (534)
Q Consensus       436 -----~~~~~~~~~~divVn~t~  453 (534)
                           ++.+ .+.++|+||+|+-
T Consensus       213 ~~~~~~~~~-~~~~~D~Vv~~~d  234 (376)
T PRK08762        213 RVTSDNVEA-LLQDVDVVVDGAD  234 (376)
T ss_pred             cCChHHHHH-HHhCCCEEEECCC
Confidence                 1111 2356899999984

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.94  E-value=0.0016  Score=60.17  Aligned_cols=69  Identities=30%  Similarity=0.319  Sum_probs=49.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cc----------cccccccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA----------LSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~----------~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      ++.|+|+|..|.|+|..|++.|.+|+++.|+.+..+.+.+.-.. ..          ....|+++ ....+|++|-++|.
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~-a~~~ad~IiiavPs   79 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEE-ALEDADIIIIAVPS   79 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHH-HHTT-SEEEE-S-G
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHH-HhCcccEEEecccH
Confidence            58999999999999999999999999999999988888765321 10          01123333 34578999988875


Q ss_pred             C
Q 009464          455 G  455 (534)
Q Consensus       455 g  455 (534)
                      -
T Consensus        80 ~   80 (157)
T PF01210_consen   80 Q   80 (157)
T ss_dssp             G
T ss_pred             H
Confidence            3

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.93  E-value=0.00073  Score=65.84  Aligned_cols=71  Identities=28%  Similarity=0.224  Sum_probs=48.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccc----ccccccCCCCceEEEEcCCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL----ADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~----~~~~~~~~~~~divVn~t~~g  455 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+....  ....+.....++    +++.+ ..+..|++||+++..
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~-~~~~id~lv~~ag~~   78 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--LSGNFHFLQLDLSDDLEPLFD-WVPSVDILCNTAGIL   78 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--cCCcEEEEECChHHHHHHHHH-hhCCCCEEEECCCCC
Confidence            56899999999 8999999999999999999999985431  111110001122    11112 345789999998753

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.93  E-value=0.00073  Score=72.80  Aligned_cols=116  Identities=23%  Similarity=0.332  Sum_probs=73.8

Q ss_pred             EEEEEc-CchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCC
Q 009464          386 LFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  464 (534)
Q Consensus       386 ~vlVlG-aGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~  464 (534)
                      ++.|+| .|++|.+++..|.+.|.+|++++|+.+++++++.+++...  ..+..+ ....+|+||-|+|....... ...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~--~~~~~e-~~~~aDvVIlavp~~~~~~v-l~~   77 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY--ANDNID-AAKDADIVIISVPINVTEDV-IKE   77 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee--ccCHHH-HhccCCEEEEecCHHHHHHH-HHH
Confidence            589998 5999999999999999999999999988878877765422  112222 34568999999986421100 000


Q ss_pred             CCccccCCCCEEEEEecC-CChhHHHHHHHHCCCeEeccHHHH
Q 009464          465 IPKHALGHYALVFDAVYT-PKITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       465 i~~~~l~~~~~v~Dv~y~-p~~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                      + ...++++.+++|+.-. +.....+......|+.++.+-.|+
T Consensus        78 l-~~~l~~~~iViDvsSvK~~~~~~l~~~~~~~~~~V~~HPma  119 (437)
T PRK08655         78 V-APHVKEGSLLMDVTSVKERPVEAMEEYAPEGVEILPTHPMF  119 (437)
T ss_pred             H-HhhCCCCCEEEEcccccHHHHHHHHHhcCCCCEEEEcCCCC
Confidence            1 1235667899999843 112222222222356677665553

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=96.92  E-value=0.0013  Score=71.36  Aligned_cols=110  Identities=23%  Similarity=0.236  Sum_probs=72.6

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc-C-cc---cccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-G-HA---LSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~-~-~~---~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      +-|+|.|-||.++|..|++.|.+|+++||+.++++++.+... . ..   .+.+++.+ .+..+|+|+-+.+.+..-  +
T Consensus         2 IG~IGLG~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~-~l~~~dvIil~v~~~~~v--~   78 (467)
T TIGR00873         2 IGVIGLAVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQ-SLERPRKIMLMVKAGAPV--D   78 (467)
T ss_pred             EEEEeeHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHh-hcCCCCEEEEECCCcHHH--H
Confidence            578999999999999999999999999999999999987622 1 11   12233332 334578888777654210  1


Q ss_pred             CCCCC--ccccCCCCEEEEEec-CCChh-HHHHHHHHCCCeEe
Q 009464          462 ETPIP--KHALGHYALVFDAVY-TPKIT-RLLREAEESGATIV  500 (534)
Q Consensus       462 ~~~i~--~~~l~~~~~v~Dv~y-~p~~T-~ll~~A~~~G~~ii  500 (534)
                      . -+.  ...+.++.+++|..- .|..| ...+..+++|+.++
T Consensus        79 ~-Vi~~l~~~L~~g~iIID~gns~~~~t~~~~~~l~~~gi~fv  120 (467)
T TIGR00873        79 A-VINQLLPLLEKGDIIIDGGNSHYPDTERRYKELKAKGILFV  120 (467)
T ss_pred             H-HHHHHHhhCCCCCEEEECCCcCHHHHHHHHHHHHhcCCEEE
Confidence            1 011  123567789999974 34544 34455666777654

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.92  E-value=0.0016  Score=61.78  Aligned_cols=97  Identities=16%  Similarity=0.145  Sum_probs=63.1

Q ss_pred             cccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc----ccccCCCCceEEEEcCCC
Q 009464          380 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD----LENFNPEDGMILANTTSI  454 (534)
Q Consensus       380 ~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~----~~~~~~~~~divVn~t~~  454 (534)
                      .+++||+++|+|-+ -.|+.++..|.+.|+.|++++.+.-....-............+    +.+ ...++||||.++|.
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~-~~~~ADIVIsAvG~  136 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLD-CLSQSDVVITGVPS  136 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccchhhHHHH-HhhhCCEEEEccCC
Confidence            47899999999996 7799999999999999999963321100000000000000011    222 34578999998874


Q ss_pred             CCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          455 GMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       455 g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .      ...+..++++++.+|+|+-.+-
T Consensus       137 ~------~~~i~~d~ik~GavVIDVGi~~  159 (197)
T cd01079         137 P------NYKVPTELLKDGAICINFASIK  159 (197)
T ss_pred             C------CCccCHHHcCCCcEEEEcCCCc
Confidence            2      1226788999999999998663

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.91  E-value=0.0026  Score=63.18  Aligned_cols=35  Identities=29%  Similarity=0.412  Sum_probs=31.0

Q ss_pred             ccCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeC
Q 009464          381 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       381 ~l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R  415 (534)
                      .+++|+++|+|++   |+|+++|..|++.|++|++++|
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~   40 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW   40 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence            3678999999994   8999999999999999988754

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.0023  Score=63.39  Aligned_cols=75  Identities=25%  Similarity=0.290  Sum_probs=49.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHc---Ccc----ccccc---cccc-----
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR----TYDRARELAETVG---GHA----LSLAD---LENF-----  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R----~~~~a~~la~~~~---~~~----~~~~~---~~~~-----  440 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|+++.+    +.+.++++.+.+.   .+.    .++.+   +.++     
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence            457899999999 89999999999999998655543    3445555554432   111    12221   1110     


Q ss_pred             -CCCCceEEEEcCCCC
Q 009464          441 -NPEDGMILANTTSIG  455 (534)
Q Consensus       441 -~~~~~divVn~t~~g  455 (534)
                       ..+..|++||+++..
T Consensus        85 ~~~~~id~li~~ag~~  100 (257)
T PRK12744         85 AAFGRPDIAINTVGKV  100 (257)
T ss_pred             HhhCCCCEEEECCccc
Confidence             235689999999864

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.90  E-value=0.0018  Score=66.74  Aligned_cols=114  Identities=21%  Similarity=0.217  Sum_probs=68.5

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+++|..+...|++|..++|+....     ..+.   ...++++ .+...|+|+.++|....  
T Consensus       141 ~~L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~---~~~~l~e-ll~~sDvv~lh~Plt~~--  209 (311)
T PRK08410        141 GEIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEY---ERVSLEE-LLKTSDIISIHAPLNEK--  209 (311)
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCc---eeecHHH-HhhcCCEEEEeCCCCch--
Confidence            35789999999999999999999999999999999964221     0011   1223333 34457888887775421  


Q ss_pred             CCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHH
Q 009464          460 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       460 ~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                       ...-|..+   .++++.+++.+.-.+. ++.-|..|.+.|--. -|++.+
T Consensus       210 -T~~li~~~~~~~Mk~~a~lIN~aRG~vVDe~AL~~AL~~g~i~-AaLDV~  258 (311)
T PRK08410        210 -TKNLIAYKELKLLKDGAILINVGRGGIVNEKDLAKALDEKDIY-AGLDVL  258 (311)
T ss_pred             -hhcccCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHcCCeE-EEEecC
Confidence             11123332   2345556665554433 444445555555333 455543

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.90  E-value=0.00048  Score=70.84  Aligned_cols=39  Identities=18%  Similarity=0.155  Sum_probs=35.5

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      .+.+|++.|+|.|.+|+.++..|...|++|+.++|+.++
T Consensus       133 ~l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~  171 (312)
T PRK15469        133 HREDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKS  171 (312)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence            467899999999999999999999999999999987654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.90  E-value=0.0025  Score=63.12  Aligned_cols=35  Identities=31%  Similarity=0.445  Sum_probs=32.0

Q ss_pred             cCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCC
Q 009464          382 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       382 l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~  416 (534)
                      +++|+++|+|++   |+|++++..|++.|++|++..|+
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            567899999993   89999999999999999999987

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.89  E-value=0.0016  Score=67.83  Aligned_cols=72  Identities=24%  Similarity=0.377  Sum_probs=52.0

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH---------------------HHHHHHHHHHcC---cc--c-
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY---------------------DRARELAETVGG---HA--L-  432 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~---------------------~~a~~la~~~~~---~~--~-  432 (534)
                      .+++++|+|+|+||.|..++..|+..|+ +++|++++.                     .|++.+++.+..   ..  . 
T Consensus        21 ~L~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         21 KIREKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            4667899999999999999999999999 999999874                     366666655531   11  0 


Q ss_pred             ---cc--ccccccCCCCceEEEEcCC
Q 009464          433 ---SL--ADLENFNPEDGMILANTTS  453 (534)
Q Consensus       433 ---~~--~~~~~~~~~~~divVn~t~  453 (534)
                         ++  +++.+ ...++|+||+++.
T Consensus       101 ~~~~~~~~~~~~-~~~~~DlVid~~D  125 (338)
T PRK12475        101 VVTDVTVEELEE-LVKEVDLIIDATD  125 (338)
T ss_pred             EeccCCHHHHHH-HhcCCCEEEEcCC
Confidence               11  12223 3467899999874

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=96.87  E-value=0.0022  Score=66.21  Aligned_cols=49  Identities=33%  Similarity=0.463  Sum_probs=41.4

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG  428 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~  428 (534)
                      ..+++|++.|+|.|.+|++++..|...|.+|++.+|+.++..+.++..+
T Consensus        13 ~~L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G   61 (330)
T PRK05479         13 SLIKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADG   61 (330)
T ss_pred             hhhCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCC
Confidence            3567899999999999999999999999999998888766666665544

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.87  E-value=0.0027  Score=68.66  Aligned_cols=75  Identities=31%  Similarity=0.375  Sum_probs=53.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC--HHHHHHHHHHHcCccc--cccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT--YDRARELAETVGGHAL--SLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~--~~~a~~la~~~~~~~~--~~~~---~~~~------~~~~~d  446 (534)
                      .+++++++|+|+ ||+|++++..|++.|++|++++|.  .++.++++++++....  ++.+   +..+      ..+..|
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            456899999999 999999999999999999999884  4556666666543221  2211   1110      234689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus       287 ~vi~~AG~~  295 (450)
T PRK08261        287 IVVHNAGIT  295 (450)
T ss_pred             EEEECCCcC
Confidence            999999865

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.87  E-value=0.003  Score=63.92  Aligned_cols=114  Identities=18%  Similarity=0.128  Sum_probs=72.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++.|+|.|-||.+++.+|.+.|.+|++++|+.++.+++.+.-.... ...+. + ...++|+||-|+|....... ...+
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~-~~~~~-~-~~~~aDlVilavp~~~~~~~-~~~l   77 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDE-ASTDL-S-LLKDCDLVILALPIGLLLPP-SEQL   77 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCccc-ccCCH-h-HhcCCCEEEEcCCHHHHHHH-HHHH
Confidence            5889999999999999999999999999999988777654311110 11111 2 23568999999985422100 0001


Q ss_pred             CccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHH
Q 009464          466 PKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       466 ~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                       ...+.++.++.|+...  ....++.+.+.+.+++.+-.|.
T Consensus        78 -~~~l~~~~ii~d~~Sv--k~~~~~~~~~~~~~~v~~HPm~  115 (279)
T PRK07417         78 -IPALPPEAIVTDVGSV--KAPIVEAWEKLHPRFVGSHPMA  115 (279)
T ss_pred             -HHhCCCCcEEEeCcch--HHHHHHHHHHhhCCceeeCCcC
Confidence             1224566788888754  3455666666554556544443

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.86  E-value=0.0018  Score=66.35  Aligned_cols=38  Identities=34%  Similarity=0.496  Sum_probs=34.7

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+.
T Consensus       118 ~~L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~  155 (303)
T PRK06436        118 KLLYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSY  155 (303)
T ss_pred             CCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            35789999999999999999999988999999999974

>PRK07069 short chain dehydrogenase; Validated

Probab=96.86  E-value=0.0018  Score=63.67  Aligned_cols=69  Identities=22%  Similarity=0.377  Sum_probs=49.8

Q ss_pred             EEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHcCc---------cccccccccc---------CCCCce
Q 009464          387 FVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGGH---------ALSLADLENF---------NPEDGM  446 (534)
Q Consensus       387 vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~~~---------~~~~~~~~~~---------~~~~~d  446 (534)
                      ++|+|+ ||+|++++..|++.|++|++++|+ .++++++.+.+...         ..++.+.+.+         ..+..|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            799998 899999999999999999999998 77777776655311         0122211110         235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++||+++..
T Consensus        82 ~vi~~ag~~   90 (251)
T PRK07069         82 VLVNNAGVG   90 (251)
T ss_pred             EEEECCCcC
Confidence            999998764

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.85  E-value=0.0028  Score=61.23  Aligned_cols=48  Identities=23%  Similarity=0.291  Sum_probs=39.8

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHH
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELAET  426 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~  426 (534)
                      ..+++||+++|+|+|.+|..-+..|.+.|++|+|++.+.. ..+++++.
T Consensus         4 ~l~l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~   52 (205)
T TIGR01470         4 FANLEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQ   52 (205)
T ss_pred             EEEcCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHc
Confidence            4578899999999999999999999999999999987653 44555543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.85  E-value=0.0029  Score=61.72  Aligned_cols=70  Identities=23%  Similarity=0.308  Sum_probs=49.1

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHcC---c--c--ccccc---c-------cccCCCCc
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGG---H--A--LSLAD---L-------ENFNPEDG  445 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~~---~--~--~~~~~---~-------~~~~~~~~  445 (534)
                      |+++|+|+ ||+|+.++..|++.|++|+++.| +.++.+++..++..   .  .  .++.+   +       .+ ..+..
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEA-ELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHH-HcCCC
Confidence            57999998 99999999999999999888877 66666665544321   1  1  12211   1       11 23568


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+||++++..
T Consensus        80 d~vi~~ag~~   89 (242)
T TIGR01829        80 DVLVNNAGIT   89 (242)
T ss_pred             cEEEECCCCC
Confidence            9999999764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.85  E-value=0.0015  Score=66.10  Aligned_cols=129  Identities=16%  Similarity=0.181  Sum_probs=80.0

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCC----CeEEEEeCCH-HHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKG----ARVVIANRTY-DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G----~~v~i~~R~~-~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      .++.++|+|-||.+++..|.+.|    .+|++++|+. ++++.+++.++...  ..+..+ ....+|+||-+++......
T Consensus         4 mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~--~~~~~e-~~~~aDvVilav~p~~~~~   80 (279)
T PRK07679          4 QNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKG--THNKKE-LLTDANILFLAMKPKDVAE   80 (279)
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceE--eCCHHH-HHhcCCEEEEEeCHHHHHH
Confidence            47999999999999999999998    5899999976 46788877665432  122222 2345799998886432111


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcC
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG  519 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg  519 (534)
                      . ...+ ...+.++.+++++.-. .....++...+.+.+++.+..+...+-..++..|++
T Consensus        81 v-l~~l-~~~~~~~~liIs~~aG-i~~~~l~~~~~~~~~v~r~mPn~~~~~~~~~t~~~~  137 (279)
T PRK07679         81 A-LIPF-KEYIHNNQLIISLLAG-VSTHSIRNLLQKDVPIIRAMPNTSAAILKSATAISP  137 (279)
T ss_pred             H-HHHH-HhhcCCCCEEEEECCC-CCHHHHHHHcCCCCeEEEECCCHHHHHhcccEEEee
Confidence            0 0001 1224556789998422 223333444445567777777665555555556643

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.0025  Score=61.74  Aligned_cols=70  Identities=24%  Similarity=0.347  Sum_probs=50.0

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---ccc----cCCCCceEEEEcCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LEN----FNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~----~~~~~~divVn~t~~  454 (534)
                      |+++|+|+ |++|++++..|++.|++|+++.|+.++.+++... +...  .++.+   +.+    +....+|++|++++.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQAL-GAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-cceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            57999998 8999999999999999999999998887776542 2111  12211   111    112358999999876


Q ss_pred             C
Q 009464          455 G  455 (534)
Q Consensus       455 g  455 (534)
                      .
T Consensus        81 ~   81 (222)
T PRK06953         81 Y   81 (222)
T ss_pred             c
Confidence            4

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.83  E-value=0.0026  Score=64.19  Aligned_cols=108  Identities=18%  Similarity=0.214  Sum_probs=73.2

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHC--CCeEE-EEeCCHHHHHHHHHHHcC-c-ccccccccccCCCCceEEEEcCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAK--GARVV-IANRTYDRARELAETVGG-H-ALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~--G~~v~-i~~R~~~~a~~la~~~~~-~-~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      ..++.|+|.|.+|+..+..|.+.  ++++. +++|+.++++++++.++. . ..+++++    ....|+|+.|+|.... 
T Consensus         6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eel----l~~~D~Vvi~tp~~~h-   80 (271)
T PRK13302          6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQL----ATHADIVVEAAPASVL-   80 (271)
T ss_pred             eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHH----hcCCCEEEECCCcHHH-
Confidence            46899999999999999999873  67664 889999999999888763 1 2234433    2357999999985432 


Q ss_pred             CCCCCCCCccccCCCCEEEEEecCC--ChhHHHHHHHHCCCeEe
Q 009464          459 KVDETPIPKHALGHYALVFDAVYTP--KITRLLREAEESGATIV  500 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~y~p--~~T~ll~~A~~~G~~ii  500 (534)
                          ..+....++.+..++......  ....+.+.|++.|.++.
T Consensus        81 ----~e~~~~aL~aGk~Vi~~s~gal~~~~~L~~~A~~~g~~l~  120 (271)
T PRK13302         81 ----RAIVEPVLAAGKKAIVLSVGALLRNEDLIDLARQNGGQII  120 (271)
T ss_pred             ----HHHHHHHHHcCCcEEEecchhHHhHHHHHHHHHHcCCEEE
Confidence                112234455555455443221  23577778889998753

>TIGR00936 ahcY adenosylhomocysteinase

Probab=96.83  E-value=0.0029  Score=67.15  Aligned_cols=68  Identities=34%  Similarity=0.428  Sum_probs=51.8

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      .+.|++++|+|.|.+|+.++..+...|++|+++++++.++.+.. ..+....+.+   + ....+|++|.+|+
T Consensus       192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~v~~le---e-al~~aDVVItaTG  259 (406)
T TIGR00936       192 LIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFRVMTME---E-AAKIGDIFITATG  259 (406)
T ss_pred             CCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCEeCCHH---H-HHhcCCEEEECCC
Confidence            46899999999999999999999999999999999988764433 2233333332   2 2346799998876

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.83  E-value=0.0025  Score=62.31  Aligned_cols=71  Identities=24%  Similarity=0.317  Sum_probs=50.1

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHc---Ccc----cccccc---ccc------CCCCce
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVG---GHA----LSLADL---ENF------NPEDGM  446 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i-~~R~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~~~~d  446 (534)
                      |+++|+|+ |++|++++..|+++|++|++ +.|+.++.+++..++.   ...    .++.+.   .++      ..+..|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            57999999 89999999999999998876 5788887777665542   111    122211   110      245689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||+++..
T Consensus        82 ~vi~~ag~~   90 (247)
T PRK09730         82 ALVNNAGIL   90 (247)
T ss_pred             EEEECCCCC
Confidence            999999864

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.0032  Score=61.62  Aligned_cols=74  Identities=26%  Similarity=0.380  Sum_probs=50.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHcC---cc----cccccc---ccc------
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR----TYDRARELAETVGG---HA----LSLADL---ENF------  440 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R----~~~~a~~la~~~~~---~~----~~~~~~---~~~------  440 (534)
                      +.+++++|+|+ ||+|++++..|+++|++|++++|    +.++.+++.+++..   ..    .++.+.   ...      
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999 89999999999999999988654    45555555554421   11    122221   110      


Q ss_pred             CCCCceEEEEcCCCC
Q 009464          441 NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ~~~~~divVn~t~~g  455 (534)
                      ....+|+||++++..
T Consensus        84 ~~~~~d~vi~~ag~~   98 (249)
T PRK12827         84 EFGRLDILVNNAGIA   98 (249)
T ss_pred             HhCCCCEEEECCCCC
Confidence            124689999999764

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.81  E-value=0.0036  Score=59.18  Aligned_cols=41  Identities=24%  Similarity=0.319  Sum_probs=34.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      +|.|+|+|-||+++|..++..|++|++++++.+..++..+.
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            58899999999999999999999999999999877655443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.80  E-value=0.0064  Score=55.09  Aligned_cols=72  Identities=22%  Similarity=0.283  Sum_probs=54.3

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCc------ccc-cccccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH------ALS-LADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~------~~~-~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ++.|+|+ |.+|.++++.|...+.  ++++++++.++++..+.++..-      ... ..+..+ ....+|+||.+++..
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~-~~~~aDivvitag~~   80 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYE-ALKDADIVVITAGVP   80 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGG-GGTTESEEEETTSTS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccccc-ccccccEEEEecccc
Confidence            6899999 9999999999999987  7999999999988888776421      000 011122 356789999999876


Q ss_pred             CCC
Q 009464          456 MQP  458 (534)
Q Consensus       456 ~~~  458 (534)
                      ..|
T Consensus        81 ~~~   83 (141)
T PF00056_consen   81 RKP   83 (141)
T ss_dssp             SST
T ss_pred             ccc
Confidence            544

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK08605 D-lactate dehydrogenase; Validated

Probab=96.79  E-value=0.0021  Score=66.78  Aligned_cols=117  Identities=17%  Similarity=0.117  Sum_probs=76.1

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~-~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      ..+.|+++.|+|.|.+|+++|..|+ ..|++|+.++|+..+...   .. ..  ...++.+ .+..+|+|+.++|.....
T Consensus       142 ~~l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~---~~-~~--~~~~l~e-ll~~aDvIvl~lP~t~~t  214 (332)
T PRK08605        142 RSIKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKAA---TY-VD--YKDTIEE-AVEGADIVTLHMPATKYN  214 (332)
T ss_pred             ceeCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHhHH---hh-cc--ccCCHHH-HHHhCCEEEEeCCCCcch
Confidence            3578899999999999999999994 568899999988654311   11 11  1123333 345689999999865321


Q ss_pred             CCCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHH
Q 009464          459 KVDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       459 ~~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                         ..-+..   ..++++.+++++.-.+. .+..+..+-+.|.-.--+++.+
T Consensus       215 ---~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~  263 (332)
T PRK08605        215 ---HYLFNADLFKHFKKGAVFVNCARGSLVDTKALLDALDNGLIKGAALDTY  263 (332)
T ss_pred             ---hhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEEecc
Confidence               112222   34577789999987644 6666677767664333455554

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.79  E-value=0.0021  Score=66.41  Aligned_cols=40  Identities=33%  Similarity=0.457  Sum_probs=36.1

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +.++.||++-|+|.|.+|+++|+.++..|++|..++|+..
T Consensus       141 ~~~l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         141 GFDLRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             ccCCCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            3578899999999999999999999988889999999863

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.78  E-value=0.0034  Score=61.58  Aligned_cols=74  Identities=30%  Similarity=0.454  Sum_probs=50.9

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++. .|+.++.+++.+.+..   +.    .++.+   +.++      ..+
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999 899999999999999988765 4566666666555421   11    12211   1110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+||++++..
T Consensus        84 ~id~vi~~ag~~   95 (247)
T PRK12935         84 KVDILVNNAGIT   95 (247)
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.78  E-value=0.0033  Score=61.76  Aligned_cols=71  Identities=31%  Similarity=0.292  Sum_probs=49.6

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCCCce
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~~~d  446 (534)
                      |+++|+|+ ||+|++++..|++.|++|++. .|+.++++++.+.+..   ..    +++.+   +.++      ..+..|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            68999999 899999999999999988765 5777777776655421   11    12211   1110      235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++|++++..
T Consensus        83 ~li~~ag~~   91 (248)
T PRK06947         83 ALVNNAGIV   91 (248)
T ss_pred             EEEECCccC
Confidence            999999865

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.78  E-value=0.0036  Score=61.67  Aligned_cols=72  Identities=22%  Similarity=0.271  Sum_probs=48.8

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHc---Ccc----cccccc---ccc------CCCCc
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHA----LSLADL---ENF------NPEDG  445 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~---~~~----~~~~~~---~~~------~~~~~  445 (534)
                      .|+++|+|+ |++|++++..|++.|++|++++|+. +..++..+.+.   ...    .++.+.   .++      ..+..
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            378999999 9999999999999999999998864 44444444432   111    122111   110      23568


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |++|++++..
T Consensus        82 d~vi~~ag~~   91 (256)
T PRK12745         82 DCLVNNAGVG   91 (256)
T ss_pred             CEEEECCccC
Confidence            9999999764

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=96.77  E-value=0.006  Score=62.97  Aligned_cols=116  Identities=18%  Similarity=0.155  Sum_probs=80.7

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHcCc----ccccccccccCCCCceEEEEcCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~~----~~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      -+...|||+|..|+..+.++... ++ +|.|++|+.+.++++++.+...    +...++.++ ....+|+|+.||+.-. 
T Consensus       130 a~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~-av~~aDiIvt~T~s~~-  207 (330)
T COG2423         130 ASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEE-AVEGADIVVTATPSTE-  207 (330)
T ss_pred             CcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHH-HhhcCCEEEEecCCCC-
Confidence            36899999999999999999875 56 9999999999999999877543    233444444 5677999999997431 


Q ss_pred             CCCCCCCCCccccCCCCEEEEEe-cCCChhHHHHHHHHCC-CeEeccHHHH
Q 009464          458 PKVDETPIPKHALGHYALVFDAV-YTPKITRLLREAEESG-ATIVSGLEMF  506 (534)
Q Consensus       458 ~~~~~~~i~~~~l~~~~~v~Dv~-y~p~~T~ll~~A~~~G-~~ii~Gl~ml  506 (534)
                      |     -+..+|++++..+--+- +.|..+++-.+...+. +-+++-++--
T Consensus       208 P-----il~~~~l~~G~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~q~  253 (330)
T COG2423         208 P-----VLKAEWLKPGTHINAIGADAPGKRELDPEVLARADRVVVDSLEQT  253 (330)
T ss_pred             C-----eecHhhcCCCcEEEecCCCCcccccCCHHHHHhcCeEEEcCHHHh
Confidence            1     25567888765444333 3466665555554443 5566655433

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.72  E-value=0.0039  Score=61.14  Aligned_cols=70  Identities=26%  Similarity=0.395  Sum_probs=54.9

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHHHcCcc-----cccccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL-AETVGGHA-----LSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~l-a~~~~~~~-----~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      ++++|+|+|-.|+.+|..|.+.|.+|++++++.+++++. +.++...+     .+.+.+.++....+|++|-+|+-
T Consensus         1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            468999999999999999999999999999999998884 44554332     23333445456789999998874

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.0037  Score=60.61  Aligned_cols=69  Identities=33%  Similarity=0.436  Sum_probs=50.3

Q ss_pred             EEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc--Ccc----ccccc---cccc--CCCCceEEEEcCCCC
Q 009464          388 VVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHA----LSLAD---LENF--NPEDGMILANTTSIG  455 (534)
Q Consensus       388 lVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~--~~~----~~~~~---~~~~--~~~~~divVn~t~~g  455 (534)
                      +|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+.  ...    .++.+   +.+.  ..+..|++||+++..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            58899 899999999999999999999999988888776652  111    12222   1110  235689999999865


Q ss_pred             C
Q 009464          456 M  456 (534)
Q Consensus       456 ~  456 (534)
                      .
T Consensus        81 ~   81 (230)
T PRK07041         81 P   81 (230)
T ss_pred             C
Confidence            3

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.71  E-value=0.0029  Score=68.69  Aligned_cols=113  Identities=23%  Similarity=0.294  Sum_probs=72.0

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---ccccccccccc--CCCCceEEEEcCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HALSLADLENF--NPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~~~~~~~~~~--~~~~~divVn~t~~g~~~~~  460 (534)
                      ++.|+|.|-||.++|..|++.|++|+++||+.++++++.+....   ......+++++  .+..+|+|+-+.+.+..  .
T Consensus         3 ~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~--v   80 (470)
T PTZ00142          3 DIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEA--V   80 (470)
T ss_pred             EEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHH--H
Confidence            58899999999999999999999999999999999998764221   11112222221  23357866665543311  0


Q ss_pred             CCCCCC--ccccCCCCEEEEEecC-CChh-HHHHHHHHCCCeEec
Q 009464          461 DETPIP--KHALGHYALVFDAVYT-PKIT-RLLREAEESGATIVS  501 (534)
Q Consensus       461 ~~~~i~--~~~l~~~~~v~Dv~y~-p~~T-~ll~~A~~~G~~ii~  501 (534)
                      +.. +.  ...+.++.+++|..-. |..| ...++.+++|..+++
T Consensus        81 ~~v-i~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fld  124 (470)
T PTZ00142         81 DET-IDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYLG  124 (470)
T ss_pred             HHH-HHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEc
Confidence            000 11  1235677899999854 3444 445566777776543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.70  E-value=0.002  Score=63.88  Aligned_cols=74  Identities=23%  Similarity=0.229  Sum_probs=52.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH-cCcc--ccccc----ccccCC-CCceEEEEc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHA--LSLAD----LENFNP-EDGMILANT  451 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~-~~~~--~~~~~----~~~~~~-~~~divVn~  451 (534)
                      ..++++++|+|+ |++|++++..|.+.|++|+++.|+.++++++.... +...  .++.+    +.+ .. ..+|+||++
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~-~~~~~~d~vi~~   92 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVE-AIGDDSDAVICA   92 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHH-HhhcCCCEEEEC
Confidence            456789999998 99999999999999999999999988766543221 1111  12222    112 23 468999998


Q ss_pred             CCCC
Q 009464          452 TSIG  455 (534)
Q Consensus       452 t~~g  455 (534)
                      ++..
T Consensus        93 ~g~~   96 (251)
T PLN00141         93 TGFR   96 (251)
T ss_pred             CCCC
Confidence            8754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.70  E-value=0.0061  Score=59.39  Aligned_cols=75  Identities=36%  Similarity=0.451  Sum_probs=50.1

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHc---Ccc----ccccccc---cc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GHA----LSLADLE---NF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~---~~~----~~~~~~~---~~------~~~  443 (534)
                      +++|+++|+|+ |++|++++..|.+.|++|++..|+.+ +.+.+...+.   ...    .++.+..   ++      ...
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999 99999999999999999977777654 3445544442   111    1221111   10      124


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|.||++++...
T Consensus        83 ~id~vi~~ag~~~   95 (248)
T PRK05557         83 GVDILVNNAGITR   95 (248)
T ss_pred             CCCEEEECCCcCC
Confidence            6899999997653

>PRK07574 formate dehydrogenase; Provisional

Probab=96.70  E-value=0.0017  Score=68.62  Aligned_cols=71  Identities=15%  Similarity=0.162  Sum_probs=48.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+.... +....++...  ..++++ ....+|+|+.+.|.
T Consensus       188 ~~L~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~-~~~~~~g~~~--~~~l~e-ll~~aDvV~l~lPl  258 (385)
T PRK07574        188 YDLEGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPE-EVEQELGLTY--HVSFDS-LVSVCDVVTIHCPL  258 (385)
T ss_pred             eecCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCch-hhHhhcCcee--cCCHHH-HhhcCCEEEEcCCC
Confidence            45789999999999999999999999999999999986321 2222222111  122223 23456777777664

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.70  E-value=0.0043  Score=60.46  Aligned_cols=46  Identities=37%  Similarity=0.583  Sum_probs=41.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  427 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~  427 (534)
                      +++|+++|+|+ |++|.+++..|++.|++|++++|+.++.+++.+.+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL   49 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46789999999 89999999999999999999999999887775554

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.69  E-value=0.003  Score=61.36  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=33.2

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      .++.++|+|+|+||+|..++..|+..|+ ++++++.+
T Consensus        25 ~L~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4667899999999999999999999999 89999987

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=96.69  E-value=0.0041  Score=64.92  Aligned_cols=73  Identities=16%  Similarity=0.081  Sum_probs=52.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--c--c--ccccc---ccccCCCCceEEEEc
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLAD---LENFNPEDGMILANT  451 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~--~--~~~~~---~~~~~~~~~divVn~  451 (534)
                      .+++++||+|+ |.+|+.++..|.+.|++|+++.|+.++.+.+...+..  .  .  .++.+   +.+ ....+|.||++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~Vih~   86 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDE-AVKGCDGVFHV   86 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHH-HHcCCCEEEEC
Confidence            46789999998 8999999999999999999999998877766554421  1  1  12211   222 23468999999


Q ss_pred             CCCC
Q 009464          452 TSIG  455 (534)
Q Consensus       452 t~~g  455 (534)
                      ++..
T Consensus        87 A~~~   90 (353)
T PLN02896         87 AASM   90 (353)
T ss_pred             Cccc
Confidence            8753

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.68  E-value=0.0059  Score=64.05  Aligned_cols=101  Identities=17%  Similarity=0.112  Sum_probs=60.5

Q ss_pred             EEEEeccHHHHHHHHHhhhc--cCCCcCCCcccccCCcEEEEEcC-chhHHH--HHHHHHHCCCeEEEEeCCHH------
Q 009464          350 LFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSALAGKLFVVIGA-GGAGKA--LAYGAKAKGARVVIANRTYD------  418 (534)
Q Consensus       350 l~G~NTD~~G~~~~l~~~l~--~~~~~~~~~~~~l~~k~vlVlGa-GG~gra--ia~~L~~~G~~v~i~~R~~~------  418 (534)
                      .+-.|+--.|-.+.+++...  +..+     ...-.+|++||+|+ +|+|+|  ++.+| +.|++++++++..+      
T Consensus        10 ~i~~~~hp~gc~~~v~~qi~~~~~~~-----~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~   83 (398)
T PRK13656         10 FICTTAHPVGCEANVKEQIEYVKAQG-----PIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKT   83 (398)
T ss_pred             eeECCCCCHHHHHHHHHHHHHHHhcC-----CcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcc
Confidence            55556666676666654321  0110     11234699999999 799999  89999 99998877774321      


Q ss_pred             ---------HHHHHHHHHcCcc----cccc----------cccccCCCCceEEEEcCCCCCC
Q 009464          419 ---------RARELAETVGGHA----LSLA----------DLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       419 ---------~a~~la~~~~~~~----~~~~----------~~~~~~~~~~divVn~t~~g~~  457 (534)
                               ..+++++..+...    ++..          .+.+ ..+..|+|||+++.+..
T Consensus        84 ~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~e-~~G~IDiLVnSaA~~~r  144 (398)
T PRK13656         84 GTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIKQ-DLGQVDLVVYSLASPRR  144 (398)
T ss_pred             cccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hcCCCCEEEECCccCCC
Confidence                     1333444443221    1111          1122 45789999999987643

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=96.67  E-value=0.0044  Score=65.25  Aligned_cols=37  Identities=19%  Similarity=0.401  Sum_probs=34.6

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      ..+.||++.|+|.|.+|+.++..|...|++|..+++.
T Consensus       112 ~~L~gktvGIIG~G~IG~~vA~~l~a~G~~V~~~dp~  148 (378)
T PRK15438        112 FSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPP  148 (378)
T ss_pred             CCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCc
Confidence            5688999999999999999999999999999999875

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.67  E-value=0.0033  Score=53.70  Aligned_cols=38  Identities=26%  Similarity=0.316  Sum_probs=33.1

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .++++++++|+|+|.+|..-+..|.+.|++|++++.+.
T Consensus         3 l~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch
Confidence            35789999999999999999999999999999999986

>PLN03139 formate dehydrogenase; Provisional

Probab=96.67  E-value=0.0016  Score=68.75  Aligned_cols=71  Identities=21%  Similarity=0.251  Sum_probs=48.0

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      ..+.||++.|+|.|.+|+.++..|...|++|..++|+....+ .....+...  .+++.+ .+...|+|+.++|.
T Consensus       195 ~~L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~-~~~~~g~~~--~~~l~e-ll~~sDvV~l~lPl  265 (386)
T PLN03139        195 YDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPE-LEKETGAKF--EEDLDA-MLPKCDVVVINTPL  265 (386)
T ss_pred             cCCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchh-hHhhcCcee--cCCHHH-HHhhCCEEEEeCCC
Confidence            468899999999999999999999999999999998753222 222222111  122333 23346777766663

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=96.66  E-value=0.0033  Score=63.95  Aligned_cols=107  Identities=20%  Similarity=0.190  Sum_probs=69.9

Q ss_pred             EEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC--C
Q 009464          389 VIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI--P  466 (534)
Q Consensus       389 VlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i--~  466 (534)
                      |+|.|-||.+++..|.+.|.+|+++||+.++.+.+.+. +...  .++..+ .....|+||-+.+....  .....+  .
T Consensus         1 ~IGlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~--~~s~~~-~~~~advVil~vp~~~~--~~~v~~g~~   74 (288)
T TIGR01692         1 FIGLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA-GAQA--AASPAE-AAEGADRVITMLPAGQH--VISVYSGDE   74 (288)
T ss_pred             CCcccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc-CCee--cCCHHH-HHhcCCEEEEeCCChHH--HHHHHcCcc
Confidence            57999999999999999999999999999998887653 2211  122222 23467999988875321  000000  0


Q ss_pred             --ccccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEec
Q 009464          467 --KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  501 (534)
Q Consensus       467 --~~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii~  501 (534)
                        ...+.++.+++|+..... .+ .+.+.++++|+.+++
T Consensus        75 ~l~~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vd  113 (288)
T TIGR01692        75 GILPKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMD  113 (288)
T ss_pred             hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence              123456789999997544 33 344556677877766

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.66  E-value=0.035  Score=54.15  Aligned_cols=137  Identities=18%  Similarity=0.182  Sum_probs=81.9

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH----------HHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY----------DRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~----------~~a~~la~  425 (534)
                      +.|...+++..++..       +.++++++++|.|.|.+|+.++..|.+.|+ .|.+++.+.          +..+...+
T Consensus         3 g~Gv~~~~~~~~~~~-------~~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~   75 (217)
T cd05211           3 GYGVVVAMKAAMKHL-------GDSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVA   75 (217)
T ss_pred             hhHHHHHHHHHHHHc-------CCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHh
Confidence            467777776655431       246889999999999999999999999999 567777766          44443333


Q ss_pred             HHcCccccc-ccc--cccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEecc
Q 009464          426 TVGGHALSL-ADL--ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG  502 (534)
Q Consensus       426 ~~~~~~~~~-~~~--~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~G  502 (534)
                      .......+- +.+  .++...++|++|-|+.-+.-   +..+.  ..+. ..+|+.-.-+|....--+.-+++|..+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~~~~DVlipaA~~~~i---~~~~a--~~l~-a~~V~e~AN~p~t~~a~~~L~~~Gi~v~Pd  149 (217)
T cd05211          76 LGGSARVKVQDYFPGEAILGLDVDIFAPCALGNVI---DLENA--KKLK-AKVVAEGANNPTTDEALRILHERGIVVAPD  149 (217)
T ss_pred             hCCccccCcccccCcccceeccccEEeeccccCcc---ChhhH--hhcC-ccEEEeCCCCCCCHHHHHHHHHCCcEEECh
Confidence            322111110 001  11112368999988864321   11111  1222 367777776666444444557778777665


Q ss_pred             HHHH
Q 009464          503 LEMF  506 (534)
Q Consensus       503 l~ml  506 (534)
                      .-+-
T Consensus       150 ~~~N  153 (217)
T cd05211         150 IVAN  153 (217)
T ss_pred             HHhc
Confidence            5443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=96.66  E-value=0.0039  Score=63.78  Aligned_cols=69  Identities=26%  Similarity=0.372  Sum_probs=49.1

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ..+++|++.|+|-|.+|+++|..|...|++|++++|. .+..+.++..+....+++   + ....+|+|+.+.|
T Consensus        12 ~~LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~-~~s~~~A~~~G~~v~sl~---E-aak~ADVV~llLP   80 (335)
T PRK13403         12 ELLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRP-GKSFEVAKADGFEVMSVS---E-AVRTAQVVQMLLP   80 (335)
T ss_pred             hhhCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECc-chhhHHHHHcCCEECCHH---H-HHhcCCEEEEeCC
Confidence            4578999999999999999999999999999999886 444444444333322222   2 2334677776665

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.65  E-value=0.0024  Score=62.84  Aligned_cols=38  Identities=32%  Similarity=0.457  Sum_probs=34.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .++++|+++|+|+ |++|++++..|++.|++|++++|+.
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~   42 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF   42 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence            3467899999999 8999999999999999999999986

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.64  E-value=0.0065  Score=59.64  Aligned_cols=74  Identities=27%  Similarity=0.431  Sum_probs=48.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHH---cCcc----ccccc----------ccccCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETV---GGHA----LSLAD----------LENFNP  442 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~---~~~~----~~~~~----------~~~~~~  442 (534)
                      +++++++|+|+ |++|++++..|+++|++|++..| +.++..+....+   +.+.    .++.+          +.+ ..
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   82 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID-RY   82 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH-Hc
Confidence            45789999999 89999999999999998877664 334443333222   1111    12211          111 23


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      ...|+||++++.+.
T Consensus        83 ~~~d~vi~~ag~~~   96 (252)
T PRK06077         83 GVADILVNNAGLGL   96 (252)
T ss_pred             CCCCEEEECCCCCC
Confidence            56899999998753

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=96.63  E-value=0.0041  Score=64.37  Aligned_cols=38  Identities=24%  Similarity=0.304  Sum_probs=33.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHH-HCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~-~~G~~v~i~~R~~  417 (534)
                      ..+.||++.|+|.|.+|++++..+. ..|++|+.++|..
T Consensus       141 ~~L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~  179 (323)
T PRK15409        141 TDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRH  179 (323)
T ss_pred             CCCCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCC
Confidence            3578999999999999999999997 7899999998864

>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]

Probab=96.61  E-value=0.023  Score=61.15  Aligned_cols=184  Identities=18%  Similarity=0.192  Sum_probs=120.8

Q ss_pred             cCCCccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCH------
Q 009464          262 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDT------  330 (534)
Q Consensus       262 iG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~------  330 (534)
                      +|+--..+.-=.|-.++.++.|++..|..++-+    ++-..+..+ .++.+.|+.|-.|+-    .++|+-+-      
T Consensus        42 VGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~ell~~I~~lNeD~tvHGiiVQLPLp----~hide~~Vt~aI~p  117 (935)
T KOG4230|consen   42 VGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGELLREIKALNEDPTVHGIIVQLPLP----AHIDEDTVTEAIDP  117 (935)
T ss_pred             ecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHHHHHHHhccCCCccceEEEeccCc----cccchhhHhhccCc
Confidence            465555555567889999999999999999863    333333444 356799999999976    23332110      


Q ss_pred             --HHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCC
Q 009464          331 --VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKG  407 (534)
Q Consensus       331 --~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G  407 (534)
                        .+.-.+..|.=.-...+|+-+=+-.--.|++.-|++.           +..+.||+++|+|-. -+|..++..|....
T Consensus       118 eKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a-----------~v~v~Gk~aVVlGRS~IVG~Pia~LL~~~N  186 (935)
T KOG4230|consen  118 EKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEA-----------GVFVAGKNAVVLGRSKIVGSPIAALLLWAN  186 (935)
T ss_pred             ccccccccccchhhhhccCCCceeeccChHHHHHHHHHc-----------CCccccceeEEEecccccCChHHHHHHhcC
Confidence              1111233333221101455555566678888876642           367899999999995 77999999999999


Q ss_pred             CeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEE--ecCCCh
Q 009464          408 ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA--VYTPKI  485 (534)
Q Consensus       408 ~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv--~y~p~~  485 (534)
                      +.|+++-.   +.+.+++.               ...+||||-++|..   +    -+-.+|++++.+|+|+  ||.|..
T Consensus       187 aTVTiCHS---KT~~lae~---------------v~~ADIvIvAiG~P---e----fVKgdWiKpGavVIDvGINyvpD~  241 (935)
T KOG4230|consen  187 ATVTICHS---KTRNLAEK---------------VSRADIVIVAIGQP---E----FVKGDWIKPGAVVIDVGINYVPDP  241 (935)
T ss_pred             ceEEEecC---CCccHHHH---------------hccCCEEEEEcCCc---c----eeecccccCCcEEEEccccccCCC
Confidence            99999842   22233332               34579999888642   1    1456799999999996  565553

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.59  E-value=0.004  Score=63.32  Aligned_cols=41  Identities=22%  Similarity=0.411  Sum_probs=37.4

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  425 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~  425 (534)
                      +++.|+|+|-||+++|..|++.|.+|++++|+.++.+++.+
T Consensus         2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   42 (288)
T PRK09260          2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ   42 (288)
T ss_pred             cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence            47999999999999999999999999999999998877654

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.0084  Score=57.75  Aligned_cols=71  Identities=21%  Similarity=0.328  Sum_probs=50.9

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cc--ccccc---cccc--CCCCceEEEEcCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF--NPEDGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~--~~~~~---~~~~--~~~~~divVn~t~~  454 (534)
                      .|+++|+|+ |++|++++..|++. ++|++++|+.++.+++.+.... ..  .++.+   +.++  ..+..|+||++++.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            478999999 89999999999999 9999999998887776654421 11  12222   2211  12368999999976


Q ss_pred             C
Q 009464          455 G  455 (534)
Q Consensus       455 g  455 (534)
                      .
T Consensus        82 ~   82 (227)
T PRK08219         82 A   82 (227)
T ss_pred             C
Confidence            4

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=96.59  E-value=0.0038  Score=64.16  Aligned_cols=71  Identities=21%  Similarity=0.185  Sum_probs=48.6

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc-----C--cc--ccccc---ccccCCCCceEEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----G--HA--LSLAD---LENFNPEDGMILA  449 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~--~~--~~~~~---~~~~~~~~~divV  449 (534)
                      .+|+++|+|+ |.+|+.++..|.+.|++|++..|+.++.+.+.....     .  ..  .++.+   +.+ ....+|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQ-AIEGCDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHH-HHhCCCEEE
Confidence            4789999999 999999999999999999988888765444322211     0  11  12211   112 234589999


Q ss_pred             EcCCC
Q 009464          450 NTTSI  454 (534)
Q Consensus       450 n~t~~  454 (534)
                      |+++.
T Consensus        83 h~A~~   87 (322)
T PLN02986         83 HTASP   87 (322)
T ss_pred             EeCCC
Confidence            99875

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=96.59  E-value=0.0037  Score=65.98  Aligned_cols=38  Identities=26%  Similarity=0.406  Sum_probs=35.0

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ..+.||++.|+|.|.+|+.++..|...|++|+++++..
T Consensus       112 ~~l~gktvGIIG~G~IG~~va~~l~a~G~~V~~~Dp~~  149 (381)
T PRK00257        112 VDLAERTYGVVGAGHVGGRLVRVLRGLGWKVLVCDPPR  149 (381)
T ss_pred             CCcCcCEEEEECCCHHHHHHHHHHHHCCCEEEEECCcc
Confidence            46789999999999999999999999999999999754

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.58  E-value=0.0037  Score=65.11  Aligned_cols=36  Identities=36%  Similarity=0.460  Sum_probs=33.3

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      .++.++|+|+|+||+|..++..|+..|+ +|++++++
T Consensus        21 ~L~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         21 KLREKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HhcCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3567899999999999999999999999 99999986

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.57  E-value=0.0017  Score=60.83  Aligned_cols=67  Identities=22%  Similarity=0.221  Sum_probs=48.5

Q ss_pred             EEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc---ccccCCCCceEEEEcCCCC
Q 009464          387 FVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENFNPEDGMILANTTSIG  455 (534)
Q Consensus       387 vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~---~~~~~~~~~divVn~t~~g  455 (534)
                      |+|+|| |.+|+.++..|.+.|++|+++.|+.++.++ ...+..-..++.+   +.+ .+.++|.||++.+.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~-al~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKA-ALKGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHH-HHTTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-ccccccceeeehhhhhhhh-hhhhcchhhhhhhhh
Confidence            689998 999999999999999999999999998877 1111100122222   233 455789999998643

...

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.56  E-value=0.0034  Score=64.86  Aligned_cols=38  Identities=37%  Similarity=0.462  Sum_probs=35.1

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      +..+.||++-|+|.|.+|+.++..|...|.+|+.+++.
T Consensus       137 g~el~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~  174 (324)
T COG0111         137 GTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPY  174 (324)
T ss_pred             cccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence            34678999999999999999999999999999999993

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.54  E-value=0.0063  Score=61.81  Aligned_cols=40  Identities=25%  Similarity=0.309  Sum_probs=35.9

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA  424 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la  424 (534)
                      +++.|+|+|-+|.++|..|++.|.+|++++++.++.++..
T Consensus         4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~   43 (287)
T PRK08293          4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAK   43 (287)
T ss_pred             cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            5799999999999999999999999999999988766554

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.53  E-value=0.0034  Score=65.82  Aligned_cols=72  Identities=18%  Similarity=0.267  Sum_probs=51.4

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH-------------------HHHHHHHHHHcC---c--cc---
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY-------------------DRARELAETVGG---H--AL---  432 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~-------------------~~a~~la~~~~~---~--~~---  432 (534)
                      .+++++|+|+|+||+|..++..|+..|+ ++++++.+.                   .|++.+++.+..   .  ..   
T Consensus        25 ~L~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         25 SLFDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HHhCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            3567899999999999999999999999 999998753                   466666666531   1  11   


Q ss_pred             ---ccccccccCCCCceEEEEcCC
Q 009464          433 ---SLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       433 ---~~~~~~~~~~~~~divVn~t~  453 (534)
                         ..++..+ .+..+|+||+|+-
T Consensus       105 ~~i~~~~~~~-~~~~~DvVvd~~d  127 (355)
T PRK05597        105 RRLTWSNALD-ELRDADVILDGSD  127 (355)
T ss_pred             eecCHHHHHH-HHhCCCEEEECCC
Confidence               1111112 2457899999973

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.53  E-value=0.0039  Score=64.37  Aligned_cols=36  Identities=39%  Similarity=0.498  Sum_probs=33.9

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .+.||++.|+|.|.+|+++|..|...|++|+.++|.
T Consensus       145 ~l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        145 ELEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             ccCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCC
Confidence            578999999999999999999999999999999986

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.52  E-value=0.0041  Score=57.29  Aligned_cols=75  Identities=24%  Similarity=0.346  Sum_probs=58.9

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc----cc---cccc------ccCCCCceE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL----SL---ADLE------NFNPEDGMI  447 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~----~~---~~~~------~~~~~~~di  447 (534)
                      .+|-.++|+|+ .|.|++.+..|++.|+.+.+.+--.++.++.+++++.+.+    +.   .|..      ....++.|.
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            35678899987 8999999999999999999999999999999999986431    11   1111      114578899


Q ss_pred             EEEcCCCCC
Q 009464          448 LANTTSIGM  456 (534)
Q Consensus       448 vVn~t~~g~  456 (534)
                      +|||+++..
T Consensus        87 ~vncagia~   95 (260)
T KOG1199|consen   87 LVNCAGIAY   95 (260)
T ss_pred             eeeccceee
Confidence            999998764

>PRK07577 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.0014  Score=63.67  Aligned_cols=37  Identities=27%  Similarity=0.329  Sum_probs=33.6

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      .+|+++|+|+ |++|++++..|++.|++|+++.|+.++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~   39 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID   39 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            3688999999 899999999999999999999998764

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.0069  Score=59.39  Aligned_cols=72  Identities=28%  Similarity=0.337  Sum_probs=48.8

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHHc---Ccc----cccccc---ccc------CCCCc
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLADL---ENF------NPEDG  445 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~~~~  445 (534)
                      +|.++|+|+ |++|.+++..|++.|++|++.. |+.++.+++...+.   ...    .++.+.   .++      ..+..
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            468999999 8999999999999999887765 56666666655442   111    122211   110      23468


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+|||+++..
T Consensus        82 d~li~~ag~~   91 (248)
T PRK06123         82 DALVNNAGIL   91 (248)
T ss_pred             CEEEECCCCC
Confidence            9999999864

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.51  E-value=0.0035  Score=65.31  Aligned_cols=73  Identities=21%  Similarity=0.108  Sum_probs=48.8

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc--Ccc----ccccc---cccc-CCCCceEEEEc
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHA----LSLAD---LENF-NPEDGMILANT  451 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~--~~~----~~~~~---~~~~-~~~~~divVn~  451 (534)
                      ++|+++|+|+ |++|++++..|.+.|++|++++|+..........+.  ...    .++.+   +.++ ....+|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            5789999998 899999999999999999999988765443332221  111    12211   1111 11247999999


Q ss_pred             CCCC
Q 009464          452 TSIG  455 (534)
Q Consensus       452 t~~g  455 (534)
                      ++..
T Consensus        83 A~~~   86 (349)
T TIGR02622        83 AAQP   86 (349)
T ss_pred             Cccc
Confidence            8743

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=96.50  E-value=0.0056  Score=67.60  Aligned_cols=70  Identities=24%  Similarity=0.288  Sum_probs=47.8

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ..+.||++.|+|.|.+|+.+|..|...|++|+.++|+....  .+...+....   ++.+ .+..+|+|+.++|..
T Consensus       136 ~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~--~~~~~g~~~~---~l~e-ll~~aDiV~l~lP~t  205 (526)
T PRK13581        136 VELYGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISPE--RAAQLGVELV---SLDE-LLARADFITLHTPLT  205 (526)
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCChh--HHHhcCCEEE---cHHH-HHhhCCEEEEccCCC
Confidence            35789999999999999999999999999999999854321  1122222222   2223 234567777777653

>PLN02256 arogenate dehydrogenase

Probab=96.48  E-value=0.0035  Score=64.31  Aligned_cols=118  Identities=20%  Similarity=0.178  Sum_probs=73.4

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      +++++.|+|.|.+|.+++..|.+.|.+|++++|+..  .+.+..++..  ...+..+.....+|+||-|++....... .
T Consensus        35 ~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~--~~~a~~~gv~--~~~~~~e~~~~~aDvVilavp~~~~~~v-l  109 (304)
T PLN02256         35 RKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDY--SDIAAELGVS--FFRDPDDFCEEHPDVVLLCTSILSTEAV-L  109 (304)
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccH--HHHHHHcCCe--eeCCHHHHhhCCCCEEEEecCHHHHHHH-H
Confidence            567899999999999999999999999999999864  3445554432  1222222111357999999986422110 0


Q ss_pred             CCCCccccCCCCEEEEEecCCChhHHHHHHHH---CCCeEeccHHHHH
Q 009464          463 TPIPKHALGHYALVFDAVYTPKITRLLREAEE---SGATIVSGLEMFI  507 (534)
Q Consensus       463 ~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~---~G~~ii~Gl~ml~  507 (534)
                      ..+....++++.+++|+.-.  ....++.+++   .+++++.+-.|+-
T Consensus       110 ~~l~~~~l~~~~iviDv~Sv--K~~~~~~~~~~l~~~~~~V~~HPmaG  155 (304)
T PLN02256        110 RSLPLQRLKRSTLFVDVLSV--KEFPKNLLLQVLPEEFDILCTHPMFG  155 (304)
T ss_pred             HhhhhhccCCCCEEEecCCc--hHHHHHHHHHhCCCCCeEEecCCCCC
Confidence            01111224567899999753  2334444444   2456777666663

>PRK06932 glycerate dehydrogenase; Provisional

Probab=96.48  E-value=0.0036  Score=64.56  Aligned_cols=38  Identities=26%  Similarity=0.357  Sum_probs=34.5

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ..+.||++.|+|.|.+|++++..+...|++|+.++|..
T Consensus       143 ~~l~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~  180 (314)
T PRK06932        143 TDVRGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKG  180 (314)
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCc
Confidence            35789999999999999999999999999999998864

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.47  E-value=0.0057  Score=63.33  Aligned_cols=90  Identities=23%  Similarity=0.131  Sum_probs=59.8

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc------C-c----ccccccccccCCCCceEEEEcCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG------G-H----ALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~------~-~----~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      .++.|+|+|.+|.+++..|++.|.+|++++|+.++++.+.+...      . .    ....++..+ ....+|+||-+++
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e-~~~~aD~Vi~~v~   83 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEE-ALAGADFAVVAVP   83 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHH-HHcCCCEEEEECc
Confidence            47999999999999999999999999999999998888875421      1 0    111122222 2356899998887


Q ss_pred             CCCCCCCCCCCCCccccCCCCEEEEEec
Q 009464          454 IGMQPKVDETPIPKHALGHYALVFDAVY  481 (534)
Q Consensus       454 ~g~~~~~~~~~i~~~~l~~~~~v~Dv~y  481 (534)
                      ....     ..+ ...+++...++++.-
T Consensus        84 ~~~~-----~~v-~~~l~~~~~vi~~~~  105 (328)
T PRK14618         84 SKAL-----RET-LAGLPRALGYVSCAK  105 (328)
T ss_pred             hHHH-----HHH-HHhcCcCCEEEEEee
Confidence            4311     001 022345567777764

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.46  E-value=0.0087  Score=61.72  Aligned_cols=75  Identities=20%  Similarity=0.313  Sum_probs=56.9

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc-------cccccccccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~-------~~~~~~~~~~~~~~divVn~t~  453 (534)
                      .++++.|+|+|.+|.++++.|+..|.  ++++++++.++++..+.++....       ....+.+  .+.++|+||.+++
T Consensus         5 ~~~ki~iiGaG~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~--~~~~adivIitag   82 (315)
T PRK00066          5 QHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYS--DCKDADLVVITAG   82 (315)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHH--HhCCCCEEEEecC
Confidence            46799999999999999999999987  79999999998888877764211       0111122  3567899999998


Q ss_pred             CCCCCC
Q 009464          454 IGMQPK  459 (534)
Q Consensus       454 ~g~~~~  459 (534)
                      ....|.
T Consensus        83 ~~~k~g   88 (315)
T PRK00066         83 APQKPG   88 (315)
T ss_pred             CCCCCC
Confidence            865543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.46  E-value=0.0052  Score=57.76  Aligned_cols=32  Identities=22%  Similarity=0.313  Sum_probs=29.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  417 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~  417 (534)
                      +|+|+|+||+|..+++.|+..|+ ++++++.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            48999999999999999999999 899999875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.44  E-value=0.0064  Score=60.04  Aligned_cols=69  Identities=14%  Similarity=0.216  Sum_probs=50.6

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC----eEEEEeC-CHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA----RVVIANR-TYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~----~v~i~~R-~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ..++.|+|+|.+|++++..|.+.|.    ++++++| +.++++++++.++...  ..+..+ ...++|+||.++|..
T Consensus         4 ~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~DiViiavp~~   77 (245)
T PRK07634          4 KHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVST--TTDWKQ-HVTSVDTIVLAMPPS   77 (245)
T ss_pred             CCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEE--eCChHH-HHhcCCEEEEecCHH
Confidence            4679999999999999999998872    3778888 4788888887765322  122323 234679999988754

>PLN02306 hydroxypyruvate reductase

Probab=96.40  E-value=0.0053  Score=64.95  Aligned_cols=39  Identities=26%  Similarity=0.228  Sum_probs=34.5

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHH-HCCCeEEEEeCCHH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIANRTYD  418 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~-~~G~~v~i~~R~~~  418 (534)
                      ..+.||++.|+|.|.+|+++|..|. ..|++|+.++|+..
T Consensus       161 ~~L~gktvGIiG~G~IG~~vA~~l~~~fGm~V~~~d~~~~  200 (386)
T PLN02306        161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQS  200 (386)
T ss_pred             cCCCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence            4578999999999999999999985 78999999998753

>PLN02712 arogenate dehydrogenase

Probab=96.38  E-value=0.0036  Score=70.88  Aligned_cols=122  Identities=20%  Similarity=0.225  Sum_probs=72.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      .+++++++.|+|.|.||++++.+|.+.|.+|++++|+.+.  +.+.+++..  ...++.++....+|+||-|+|......
T Consensus       365 ~~~~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~~~~--~~a~~~Gv~--~~~~~~el~~~~aDvVILavP~~~~~~  440 (667)
T PLN02712        365 NDGSKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSDYS--DEAQKLGVS--YFSDADDLCEEHPEVILLCTSILSTEK  440 (667)
T ss_pred             CCCCCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECChHH--HHHHHcCCe--EeCCHHHHHhcCCCEEEECCChHHHHH
Confidence            4567789999999999999999999999999999999643  223344432  122222211124799999998642211


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHH
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                      . ...+....++++.+++|+.-... ....+......|..++.+-.|+
T Consensus       441 v-i~~l~~~~lk~g~ivvDv~SvK~~~~~~~~~~l~~~~~~v~~HPm~  487 (667)
T PLN02712        441 V-LKSLPFQRLKRSTLFVDVLSVKEFPRNLFLQHLPQDFDILCTHPMF  487 (667)
T ss_pred             H-HHHHHHhcCCCCcEEEECCCccHHHHHHHHHhccCCCceEeeCCCC
Confidence            0 00111123566789999975421 1222233333456666544444

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.36  E-value=0.018  Score=62.16  Aligned_cols=37  Identities=24%  Similarity=0.390  Sum_probs=33.1

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +.+|+++|+|.|++|++++..|++.|++|++++++..
T Consensus         3 ~~~~~~~v~G~g~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          3 FQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4578999999999999999999999999999987543

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.36  E-value=0.0076  Score=57.79  Aligned_cols=44  Identities=27%  Similarity=0.450  Sum_probs=35.9

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHHHc
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR-ARELAETVG  428 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~-a~~la~~~~  428 (534)
                      +++.|+|+|-+|.+++..|++.|++|+|.+|+.++ .+.+++.++
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~   46 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG   46 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc
Confidence            47899999999999999999999999999766655 444555554

>PLN02650 dihydroflavonol-4-reductase

Probab=96.35  E-value=0.0055  Score=63.81  Aligned_cols=71  Identities=17%  Similarity=0.162  Sum_probs=49.6

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc--C---c--c--ccccc---ccccCCCCceEEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--G---H--A--LSLAD---LENFNPEDGMILA  449 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~--~---~--~--~~~~~---~~~~~~~~~divV  449 (534)
                      +.|++||+|+ |.+|+.++..|.+.|.+|+++.|+.++...+.....  .   .  .  .++.+   +.+ ....+|.||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~-~~~~~d~Vi   82 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDD-AIRGCTGVF   82 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHH-HHhCCCEEE
Confidence            4689999999 999999999999999999999998766655443221  0   0  0  12221   122 234679999


Q ss_pred             EcCCC
Q 009464          450 NTTSI  454 (534)
Q Consensus       450 n~t~~  454 (534)
                      ++++.
T Consensus        83 H~A~~   87 (351)
T PLN02650         83 HVATP   87 (351)
T ss_pred             EeCCC
Confidence            99864

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.35  E-value=0.008  Score=61.19  Aligned_cols=40  Identities=30%  Similarity=0.331  Sum_probs=36.5

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA  424 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la  424 (534)
                      +++.|+|+|.+|.+++..|+..|.+|++++|+.++.+...
T Consensus         5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~   44 (292)
T PRK07530          5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGL   44 (292)
T ss_pred             CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            6799999999999999999999999999999998876644

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.34  E-value=0.012  Score=57.52  Aligned_cols=71  Identities=28%  Similarity=0.339  Sum_probs=47.9

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHc---Ccc----ccccc---cccc------CCCCce
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~---~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      |+++|+|+ |++|++++..|++.|++|++.+|+.+ .++++...+.   ...    .++.+   +.+.      ..+..|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999998 89999999999999999999999843 3444433332   111    12211   1110      235689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++||+++..
T Consensus        83 ~vi~~ag~~   91 (245)
T PRK12824         83 ILVNNAGIT   91 (245)
T ss_pred             EEEECCCCC
Confidence            999999864

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.34  E-value=0.0058  Score=64.38  Aligned_cols=35  Identities=26%  Similarity=0.428  Sum_probs=32.2

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      +++++|+|+|+||+|..++..|+..|+ ++++++.+
T Consensus        39 l~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         39 LHNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             hcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            567899999999999999999999999 99999875

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.34  E-value=0.012  Score=57.23  Aligned_cols=74  Identities=34%  Similarity=0.391  Sum_probs=48.1

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHcC---cc----ccccccc---cc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGG---HA----LSLADLE---NF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~  443 (534)
                      ++.|+++|+|+ |++|++++..|.+.|++|++..| +.+..+.+...+..   ..    .++.+..   ++      ...
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            34689999999 99999999999999998766544 44444555444321   11    1222111   10      124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|++||+++..
T Consensus        84 ~id~vi~~ag~~   95 (249)
T PRK12825         84 RIDILVNNAGIF   95 (249)
T ss_pred             CCCEEEECCccC
Confidence            689999999854

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=96.34  E-value=0.019  Score=62.44  Aligned_cols=36  Identities=25%  Similarity=0.174  Sum_probs=32.2

Q ss_pred             cCCcEEEEEcCchhHHH-HHHHHHHCCCeEEEEeCCH
Q 009464          382 LAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       382 l~~k~vlVlGaGG~gra-ia~~L~~~G~~v~i~~R~~  417 (534)
                      .++|+++|+|.|++|.+ +|..|.++|++|++++...
T Consensus         5 ~~~~~v~viG~G~sG~s~~a~~L~~~G~~V~~~D~~~   41 (461)
T PRK00421          5 RRIKRIHFVGIGGIGMSGLAEVLLNLGYKVSGSDLKE   41 (461)
T ss_pred             CCCCEEEEEEEchhhHHHHHHHHHhCCCeEEEECCCC
Confidence            45689999999999999 6999999999999999754

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=96.32  E-value=0.009  Score=65.97  Aligned_cols=71  Identities=30%  Similarity=0.343  Sum_probs=48.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|....  +.+..++...  .+++.+ .+..+|+|+.++|..
T Consensus       134 ~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~--~~~l~e-ll~~aDvV~l~lPlt  204 (525)
T TIGR01327       134 TELYGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYISP--ERAEQLGVEL--VDDLDE-LLARADFITVHTPLT  204 (525)
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh--hHHHhcCCEE--cCCHHH-HHhhCCEEEEccCCC
Confidence            3578999999999999999999999999999999985321  1122222221  112333 234567777777654

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=96.30  E-value=0.0068  Score=62.03  Aligned_cols=37  Identities=27%  Similarity=0.240  Sum_probs=33.1

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHH
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRA  420 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a  420 (534)
                      +|+++|+|+ |.+|+.++..|.+.|++|+++.|+.++.
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~   41 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP   41 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCch
Confidence            689999998 9999999999999999999888876543

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.28  E-value=0.01  Score=60.98  Aligned_cols=41  Identities=24%  Similarity=0.297  Sum_probs=37.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  425 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~  425 (534)
                      +++.|+|+|-||.+++..|++.|++|++++++.++.+.+.+
T Consensus         5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~   45 (311)
T PRK06130          5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARG   45 (311)
T ss_pred             cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            57999999999999999999999999999999988777654

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.28  E-value=0.0076  Score=60.21  Aligned_cols=100  Identities=15%  Similarity=0.103  Sum_probs=63.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHc-CcccccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA---RVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~---~v~i~~R~~~~a~~la~~~~-~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      ++.|+|+|-||++++..|.+.|.   .+.+++|+.++++++++.++ ...  .++..+ .....|+|+-+++....    
T Consensus         2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~--~~~~~~-~~~~aDvVilav~p~~~----   74 (258)
T PRK06476          2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRI--AKDNQA-VVDRSDVVFLAVRPQIA----   74 (258)
T ss_pred             eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceE--eCCHHH-HHHhCCEEEEEeCHHHH----
Confidence            58899999999999999999885   46899999999999988763 222  122222 12357999888863211    


Q ss_pred             CCC-CCccccCCCCEEEEEecCCChhHHHHHHHH
Q 009464          462 ETP-IPKHALGHYALVFDAVYTPKITRLLREAEE  494 (534)
Q Consensus       462 ~~~-i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~  494 (534)
                       .+ +....+.++.+++++. .+.....++...+
T Consensus        75 -~~vl~~l~~~~~~~vis~~-ag~~~~~l~~~~~  106 (258)
T PRK06476         75 -EEVLRALRFRPGQTVISVI-AATDRAALLEWIG  106 (258)
T ss_pred             -HHHHHHhccCCCCEEEEEC-CCCCHHHHHHHhC
Confidence             11 1111234456777755 4455555555443

>PLN00198 anthocyanidin reductase; Provisional

Probab=96.27  E-value=0.0062  Score=63.07  Aligned_cols=73  Identities=19%  Similarity=0.158  Sum_probs=48.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH--HHcC----cc--ccccc---ccccCCCCceEE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE--TVGG----HA--LSLAD---LENFNPEDGMIL  448 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~--~~~~----~~--~~~~~---~~~~~~~~~div  448 (534)
                      +.++++++|+|+ |.+|+.++..|.+.|++|+++.|+.+....+..  .+..    ..  .++.+   +.+ ...++|+|
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~v   84 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEA-PIAGCDLV   84 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHH-HHhcCCEE
Confidence            456889999998 999999999999999999888887654332221  1110    11  12222   222 23468999


Q ss_pred             EEcCCC
Q 009464          449 ANTTSI  454 (534)
Q Consensus       449 Vn~t~~  454 (534)
                      ||+++.
T Consensus        85 ih~A~~   90 (338)
T PLN00198         85 FHVATP   90 (338)
T ss_pred             EEeCCC
Confidence            999864

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=96.27  E-value=0.005  Score=63.29  Aligned_cols=119  Identities=21%  Similarity=0.227  Sum_probs=69.8

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      +.++.||++.|+|.|.+|+++|+.|...|+.+.-.+|+..+-+...+. ..+..++++    ...+.|+||-|.|.+-..
T Consensus       157 g~~~~gK~vgilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~-~~~~~d~~~----~~~~sD~ivv~~pLt~~T  231 (336)
T KOG0069|consen  157 GYDLEGKTVGILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEY-YAEFVDIEE----LLANSDVIVVNCPLTKET  231 (336)
T ss_pred             cccccCCEEEEecCcHHHHHHHHhhhhccceeeeecccCCchhhHHHh-cccccCHHH----HHhhCCEEEEecCCCHHH
Confidence            357889999999999999999999999997788888887665544433 233333332    234567777776654221


Q ss_pred             CCCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHH
Q 009464          459 KVDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  505 (534)
Q Consensus       459 ~~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~m  505 (534)
                         ...+..   ..++++.+++.+.-.+- .-.-+.+|.+.|-..--|++.
T Consensus       232 ---~~liNk~~~~~mk~g~vlVN~aRG~iide~~l~eaL~sG~i~~aGlDV  279 (336)
T KOG0069|consen  232 ---RHLINKKFIEKMKDGAVLVNTARGAIIDEEALVEALKSGKIAGAGLDV  279 (336)
T ss_pred             ---HHHhhHHHHHhcCCCeEEEeccccccccHHHHHHHHhcCCcccccccc
Confidence               111222   23344455555554333 233334444444333344443

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.27  E-value=0.0084  Score=61.69  Aligned_cols=68  Identities=24%  Similarity=0.271  Sum_probs=49.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-c----------ccccccccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H----------ALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~----------~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      ++.|+|+|.+|.+++..|++.|.+|++++|+.++++++.+.... .          .....+..+ ....+|+||-|++.
T Consensus         3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vi~~v~~   81 (325)
T PRK00094          3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAE-ALADADLILVAVPS   81 (325)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHH-HHhCCCEEEEeCCH
Confidence            68999999999999999999999999999999998888764210 0          001112222 23467999988874

>PLN02214 cinnamoyl-CoA reductase

Probab=96.24  E-value=0.0077  Score=62.71  Aligned_cols=73  Identities=23%  Similarity=0.154  Sum_probs=49.1

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHHHcC---c--c--ccccc---ccccCCCCceEEE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRAREL-AETVGG---H--A--LSLAD---LENFNPEDGMILA  449 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~l-a~~~~~---~--~--~~~~~---~~~~~~~~~divV  449 (534)
                      +++++++|+|+ |.+|+.++..|.+.|++|+++.|+.++.... ...+..   .  .  .++.+   +.+ ....+|+||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~Vi   86 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKA-AIDGCDGVF   86 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHH-HHhcCCEEE
Confidence            46789999999 9999999999999999999999987643221 112211   1  1  12222   222 234689999


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      ++++..
T Consensus        87 h~A~~~   92 (342)
T PLN02214         87 HTASPV   92 (342)
T ss_pred             EecCCC
Confidence            998753

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.24  E-value=0.0081  Score=60.41  Aligned_cols=106  Identities=16%  Similarity=0.216  Sum_probs=69.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHCC--Ce-EEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKG--AR-VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G--~~-v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      ++.|+|.|.+|+.++..+.+.+  ++ +.+++|+.++++++++.++..  .++++++ ...++|+|+.|++....     
T Consensus         3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~--~~~~~~e-ll~~~DvVvi~a~~~~~-----   74 (265)
T PRK13304          3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAK--ACLSIDE-LVEDVDLVVECASVNAV-----   74 (265)
T ss_pred             EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCe--eECCHHH-HhcCCCEEEEcCChHHH-----
Confidence            6899999999999999998764  54 678999999999988876532  2333444 22568999999874322     


Q ss_pred             CCCCccccCCCCEEEEEec----CC-ChhHHHHHHHHCCCeE
Q 009464          463 TPIPKHALGHYALVFDAVY----TP-KITRLLREAEESGATI  499 (534)
Q Consensus       463 ~~i~~~~l~~~~~v~Dv~y----~p-~~T~ll~~A~~~G~~i  499 (534)
                      .++-...++.+.-++.+.-    .+ ....+.+.|++.|.++
T Consensus        75 ~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l  116 (265)
T PRK13304         75 EEVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKI  116 (265)
T ss_pred             HHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEE
Confidence            1122334444444444432    11 2346777788888763

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.23  E-value=0.022  Score=61.84  Aligned_cols=36  Identities=22%  Similarity=0.233  Sum_probs=33.0

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +.+|+++|+|.|+.|++++..|.+.|++|++++++.
T Consensus        12 ~~~~~i~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~   47 (458)
T PRK01710         12 IKNKKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKS   47 (458)
T ss_pred             hcCCeEEEEcccHHHHHHHHHHHHCCCEEEEECCCC
Confidence            457899999999999999999999999999999764

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.22  E-value=0.011  Score=61.11  Aligned_cols=39  Identities=31%  Similarity=0.337  Sum_probs=35.4

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  423 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~l  423 (534)
                      +++.|+|+|-||+++|..++..|++|++++++++..+.+
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~   46 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAAL   46 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence            689999999999999999999999999999998866543

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.22  E-value=0.0077  Score=59.65  Aligned_cols=35  Identities=23%  Similarity=0.360  Sum_probs=31.8

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      +++++|+|+|+||+|..++..|+..|+ ++++++++
T Consensus        22 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        22 LKASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            557899999999999999999999999 99998764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN02686 cinnamoyl-CoA reductase

Probab=96.21  E-value=0.0079  Score=63.32  Aligned_cols=45  Identities=24%  Similarity=0.230  Sum_probs=39.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELA  424 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la  424 (534)
                      .+.++|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+.
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            3467899999999 99999999999999999998889887766553

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.21  E-value=0.017  Score=60.30  Aligned_cols=71  Identities=20%  Similarity=0.274  Sum_probs=51.2

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHHHcCccccccc--ccc-cCCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANR---TYDRARELAETVGGHALSLAD--LEN-FNPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R---~~~~a~~la~~~~~~~~~~~~--~~~-~~~~~~divVn~t~~  454 (534)
                      .+++++|+|+|++|..++..+...|++|++++|   +.++. +++++++...+...+  ..+ .....+|++|++++.
T Consensus       172 ~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~-~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~  248 (355)
T cd08230         172 NPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKA-DIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGV  248 (355)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCC
Confidence            578999999999999999999999999999998   45554 466777755432211  100 012458999999874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.19  E-value=0.01  Score=57.77  Aligned_cols=69  Identities=22%  Similarity=0.327  Sum_probs=49.9

Q ss_pred             EEEEEc-CchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----cc----cccccccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlG-aGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~----~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ++.|+| +|.+|.+++..|++.|.+|++++|+.++++.+++.+..    ..    ....+..+ ....+|+||-|++..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~e-a~~~aDvVilavp~~   79 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAE-AAKRADVVILAVPWD   79 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHH-HHhcCCEEEEECCHH
Confidence            588997 79999999999999999999999999999888765311    00    01111122 234678998888754

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=96.19  E-value=0.0028  Score=65.71  Aligned_cols=38  Identities=24%  Similarity=0.162  Sum_probs=34.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      ++++|++||+|+ |++|++++..|.+.|++|+++.|+.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            457899999999 99999999999999999999888643

>PRK06545 prephenate dehydrogenase; Validated

Probab=96.15  E-value=0.0068  Score=63.69  Aligned_cols=117  Identities=22%  Similarity=0.261  Sum_probs=71.4

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccc--cccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS--LADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~--~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      +++.|+|.|-||.+++.+|.+.|.++.+++++.++.+. ....+....+  ..++.+ ....+|+||-|+|....... .
T Consensus         1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~~-~~a~~~~~~~~~~~~~~~-~~~~aDlVilavP~~~~~~v-l   77 (359)
T PRK06545          1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQL-ARALGFGVIDELAADLQR-AAAEADLIVLAVPVDATAAL-L   77 (359)
T ss_pred             CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHHH-HHHhcCCCCcccccCHHH-HhcCCCEEEEeCCHHHHHHH-H
Confidence            36899999999999999999999988899888765433 2222221111  122233 34578999999986422110 0


Q ss_pred             CCCCccccCCCCEEEEEecCCChhHHHHHHHH---CCCeEeccHHHH
Q 009464          463 TPIPKHALGHYALVFDAVYTPKITRLLREAEE---SGATIVSGLEMF  506 (534)
Q Consensus       463 ~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~---~G~~ii~Gl~ml  506 (534)
                      ..+....++++.++.|+.-.  ....++.+++   .+.+++.|-.|.
T Consensus        78 ~~l~~~~l~~~~ivtDv~Sv--K~~i~~~~~~~~~~~~~~ig~HPMa  122 (359)
T PRK06545         78 AELADLELKPGVIVTDVGSV--KGAILAEAEALLGDLIRFVGGHPMA  122 (359)
T ss_pred             HHHhhcCCCCCcEEEeCccc--cHHHHHHHHHhcCCCCeEEeeCCcC
Confidence            01111124566788897654  2344455544   356777776665

>PLN02712 arogenate dehydrogenase

Probab=96.14  E-value=0.0085  Score=67.89  Aligned_cols=118  Identities=19%  Similarity=0.180  Sum_probs=73.8

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      .+.+++.|+|.|.+|++++.+|.+.|.+|++++|+..+  +.+.+++...  ..+..++....+|+||-|+|.......-
T Consensus        50 ~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~--~~A~~~Gv~~--~~d~~e~~~~~aDvViLavP~~~~~~vl  125 (667)
T PLN02712         50 TTQLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDHS--LAARSLGVSF--FLDPHDLCERHPDVILLCTSIISTENVL  125 (667)
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHcCCEE--eCCHHHHhhcCCCEEEEcCCHHHHHHHH
Confidence            34578999999999999999999999999999998554  3355554321  2222221113479999999864211100


Q ss_pred             CCCCCccccCCCCEEEEEecCCChhHHHHHHHH---CCCeEeccHHHH
Q 009464          462 ETPIPKHALGHYALVFDAVYTPKITRLLREAEE---SGATIVSGLEMF  506 (534)
Q Consensus       462 ~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~---~G~~ii~Gl~ml  506 (534)
                       ..+....++++.+++|+.-  ..+...+.+++   .|+.++.+-.|+
T Consensus       126 -~~l~~~~l~~g~iVvDv~S--vK~~~~~~l~~~l~~~~~~v~~HPMa  170 (667)
T PLN02712        126 -KSLPLQRLKRNTLFVDVLS--VKEFAKNLLLDYLPEDFDIICSHPMF  170 (667)
T ss_pred             -HhhhhhcCCCCeEEEECCC--CcHHHHHHHHHhcCCCCeEEeeCCcC
Confidence             0111123566789999963  34444444443   356677766666

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.13  E-value=0.0086  Score=59.49  Aligned_cols=36  Identities=25%  Similarity=0.352  Sum_probs=32.2

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      .+++++|+|+|+||.|..++..|+..|+ ++++++.+
T Consensus        29 ~L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3567899999999999999999999999 89998753

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.11  E-value=0.014  Score=59.85  Aligned_cols=39  Identities=26%  Similarity=0.217  Sum_probs=35.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  423 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~l  423 (534)
                      +++.|+|+|-+|.+++..|++.|++|++++|+.++.+..
T Consensus         3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~   41 (308)
T PRK06129          3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAA   41 (308)
T ss_pred             cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence            369999999999999999999999999999998876654

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.11  E-value=0.012  Score=59.53  Aligned_cols=118  Identities=12%  Similarity=0.191  Sum_probs=72.0

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA----RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~----~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      +++.+||+|-||.+++..|.+.|.    +|++++|+.++++.+++.++...  ..+..+ ....+|+||-|++....   
T Consensus         3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~--~~~~~e-~~~~aDiIiLavkP~~~---   76 (272)
T PRK12491          3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITI--TTNNNE-VANSADILILSIKPDLY---   76 (272)
T ss_pred             CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEE--eCCcHH-HHhhCCEEEEEeChHHH---
Confidence            479999999999999999999884    69999999999988887665322  122222 23457999888763211   


Q ss_pred             CCCCC-Cc--cccCCCCEEEEEecCCChhHHHHHHHHCCC---eEeccHHHHHHHHH
Q 009464          461 DETPI-PK--HALGHYALVFDAVYTPKITRLLREAEESGA---TIVSGLEMFIGQAY  511 (534)
Q Consensus       461 ~~~~i-~~--~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~---~ii~Gl~ml~~Qa~  511 (534)
                        ..+ ..  ..++++.+++|+.=. ....-++..-....   ++++-....+.++.
T Consensus        77 --~~vl~~l~~~~~~~~lvISi~AG-i~i~~l~~~l~~~~~vvR~MPN~~~~vg~g~  130 (272)
T PRK12491         77 --SSVINQIKDQIKNDVIVVTIAAG-KSIKSTENEFDRKLKVIRVMPNTPVLVGEGM  130 (272)
T ss_pred             --HHHHHHHHHhhcCCcEEEEeCCC-CcHHHHHHhcCCCCcEEEECCChHHHHcCce
Confidence              111 11  123455678888733 33333333322222   34555555555543

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.10  E-value=0.015  Score=59.10  Aligned_cols=39  Identities=23%  Similarity=0.319  Sum_probs=35.8

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  423 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~l  423 (534)
                      +++.|+|+|-||.+++..|+..|.+|++++++.++.+..
T Consensus         4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~   42 (291)
T PRK06035          4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNA   42 (291)
T ss_pred             cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence            579999999999999999999999999999999887653

>PRK07578 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.0071  Score=57.45  Aligned_cols=62  Identities=19%  Similarity=0.217  Sum_probs=42.7

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc--CCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF--NPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~--~~~~~divVn~t~~g  455 (534)
                      +++|+|+ ||+|++++..|++. ++|++++|+.+.       +..+..+.+++.++  ..++.|++||+++..
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-------~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~   66 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-------VQVDITDPASIRALFEKVGKVDAVVSAAGKV   66 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-------eEecCCChHHHHHHHHhcCCCCEEEECCCCC
Confidence            6899999 89999999999998 999999997541       11111111111110  235689999999865

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.08  E-value=0.0085  Score=58.81  Aligned_cols=35  Identities=29%  Similarity=0.430  Sum_probs=31.3

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANR  415 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R  415 (534)
                      .+.+++|+|+|+||+|..++..|+..|+ ++++++.
T Consensus        18 ~L~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          18 KLKNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             HHhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3567899999999999999999999999 8998853

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.06  E-value=0.022  Score=59.20  Aligned_cols=71  Identities=23%  Similarity=0.287  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-cccc--ccccc--CCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLA--DLENF--NPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~--~~~~~--~~~~~divVn~t~~  454 (534)
                      .+++++|+|+|++|.+++..+...|+ +|++++++.++.+ ++++++... .+..  ++.+.  ..+.+|+++++++.
T Consensus       169 ~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~-~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~  245 (343)
T PRK09880        169 QGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLS-LAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGH  245 (343)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHH-HHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCC
Confidence            57899999999999999998989999 7999999988865 556677532 2211  11110  12348999999874

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.04  E-value=0.015  Score=58.33  Aligned_cols=36  Identities=22%  Similarity=0.357  Sum_probs=32.5

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      .+++++|+|+|.||+|-.++..|+..|+ +++|++.+
T Consensus        27 kL~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4678899999999999999999999998 99998854

>PRK08017 oxidoreductase; Provisional

Probab=96.04  E-value=0.013  Score=57.74  Aligned_cols=71  Identities=28%  Similarity=0.361  Sum_probs=50.5

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccccc---c----cc---CCCCceEEEEc
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADL---E----NF---NPEDGMILANT  451 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~~---~----~~---~~~~~divVn~  451 (534)
                      |+++|+|+ |++|++++..|++.|++|++++|+.++.+.+.+ .+...  .++.+.   .    ..   ..+..|.+|++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            68999999 999999999999999999999999988766543 22211  122111   1    10   12467999999


Q ss_pred             CCCCC
Q 009464          452 TSIGM  456 (534)
Q Consensus       452 t~~g~  456 (534)
                      ++.+.
T Consensus        82 ag~~~   86 (256)
T PRK08017         82 AGFGV   86 (256)
T ss_pred             CCCCC
Confidence            98654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.02  E-value=0.0083  Score=60.66  Aligned_cols=126  Identities=20%  Similarity=0.203  Sum_probs=80.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH-cCcc----cc---cccccc--------cCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHA----LS---LADLEN--------FNP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~-~~~~----~~---~~~~~~--------~~~  442 (534)
                      .++.+|.|+|+|. .|-|+..|..|.+.|..|+..-.+.+.++++..+. ....    .+   -+.+.+        ...
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            4567899999999 89999999999999999999889999999988776 2211    11   111111        012


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCcccc--CCCCEEEEEecCCC---hhHHHHHHHHCCCeEeccHHHHHHHHH
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHAL--GHYALVFDAVYTPK---ITRLLREAEESGATIVSGLEMFIGQAY  511 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l--~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii~Gl~ml~~Qa~  511 (534)
                      .+.-.||||+|+.+...      +.+|+  ....-++|+|.-..   ...|+..-|+...++||-.+|.-.++.
T Consensus       105 ~gLwglVNNAGi~~~~g------~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~  172 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLG------PDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL  172 (322)
T ss_pred             ccceeEEeccccccccC------ccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence            23667999999764321      12222  22345777776433   224555555555578876666654443

>PRK08223 hypothetical protein; Validated

Probab=95.99  E-value=0.011  Score=59.66  Aligned_cols=36  Identities=22%  Similarity=0.302  Sum_probs=32.4

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      .+++++|+|+|+||.|-.++..|+..|+ ++++++.+
T Consensus        24 kL~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            4667899999999999999999999999 99998753

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.012  Score=57.82  Aligned_cols=43  Identities=30%  Similarity=0.463  Sum_probs=36.3

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHH
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETV  427 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~  427 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+. ++.+++.+..
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   46 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY   46 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc
Confidence            58999998 8999999999999999999999987 5555555443

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=95.98  E-value=0.019  Score=58.64  Aligned_cols=109  Identities=19%  Similarity=0.177  Sum_probs=68.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++.+||.|-||.+++..|.+.|++|++++|+.. ++.+.+ .+...  ..+..+ ....+|+||-+.+-..  .......
T Consensus         2 ~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~-~g~~~--~~s~~~-~~~~advVi~~v~~~~--~v~~v~~   74 (292)
T PRK15059          2 KLGFIGLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLS-LGAVS--VETARQ-VTEASDIIFIMVPDTP--QVEEVLF   74 (292)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHH-cCCee--cCCHHH-HHhcCCEEEEeCCChH--HHHHHHc
Confidence            478999999999999999999999999999874 455532 22221  112222 2346799998876331  0000001


Q ss_pred             Cc----cccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEec
Q 009464          466 PK----HALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  501 (534)
Q Consensus       466 ~~----~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii~  501 (534)
                      ..    ..+.++.+++|+.-... .+ .+.+.++++|+.+++
T Consensus        75 ~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~~~~~~G~~~vd  116 (292)
T PRK15059         75 GENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLD  116 (292)
T ss_pred             CCcchhccCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence            11    12356789999986533 33 355666778876665

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=95.98  E-value=0.0061  Score=59.81  Aligned_cols=63  Identities=29%  Similarity=0.473  Sum_probs=45.2

Q ss_pred             chhHHHHHHHHHHCCCeEEEEeCCHHH----HHHHHHHHcCccc--ccc---ccccc------CC-CCceEEEEcCCCC
Q 009464          393 GGAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHAL--SLA---DLENF------NP-EDGMILANTTSIG  455 (534)
Q Consensus       393 GG~graia~~L~~~G~~v~i~~R~~~~----a~~la~~~~~~~~--~~~---~~~~~------~~-~~~divVn~t~~g  455 (534)
                      +|+|+++|..|++.|++|++.+|+.++    .+++.++++.+..  ++.   ++.++      .. +..|++||+++..
T Consensus         6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~   84 (241)
T PF13561_consen    6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGIS   84 (241)
T ss_dssp             SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESC
T ss_pred             CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEeccccc
Confidence            699999999999999999999999998    4555555554321  111   11110      24 7899999998754

...

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.98  E-value=0.01  Score=60.93  Aligned_cols=66  Identities=24%  Similarity=0.293  Sum_probs=47.7

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccc---cccccCCCCceEEEEcCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTS  453 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~~~~~~~~~~divVn~t~  453 (534)
                      +++|+|| |-+|+.++.+|.+.|++|+++.|+.+++..+.. .+.+.  .++.   ++.+ .+.++|+||++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~-al~g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPP-SFKGVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHH-HHCCCCEEEECCC
Confidence            6899998 999999999999999999999999876654432 12221  1222   2333 3567899999875

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=95.97  E-value=0.015  Score=58.21  Aligned_cols=65  Identities=23%  Similarity=0.348  Sum_probs=49.2

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCC----CeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKG----ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTT  452 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G----~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t  452 (534)
                      .++.+||+|-||++++..|.+.|    .+|++++|+.++.+.++++++...  ..+... .....|+|+-+.
T Consensus         2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~~--~~~~~~-~~~~advv~Lav   70 (266)
T COG0345           2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVVT--TTDNQE-AVEEADVVFLAV   70 (266)
T ss_pred             ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCcc--cCcHHH-HHhhCCEEEEEe
Confidence            46899999999999999999999    389999999999999999987552  111111 223456666554

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=95.97  E-value=0.016  Score=59.78  Aligned_cols=68  Identities=22%  Similarity=0.275  Sum_probs=44.3

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHcCcccccccccccCCCCceEEEEcCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      +++|++.|+|.|-+|.+++..|.+.|.+|++..|.. ++.+.+. +.+....+   ..+ ....+|+|+.+++.
T Consensus         1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~-~~Gv~~~s---~~e-a~~~ADiVvLaVpp   69 (314)
T TIGR00465         1 LKGKTVAIIGYGSQGHAQALNLRDSGLNVIVGLRKGGASWKKAT-EDGFKVGT---VEE-AIPQADLIMNLLPD   69 (314)
T ss_pred             CCcCEEEEEeEcHHHHHHHHHHHHCCCeEEEEECcChhhHHHHH-HCCCEECC---HHH-HHhcCCEEEEeCCc
Confidence            357899999999999999999999999887766543 3333333 33322211   112 22346777766653

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.96  E-value=0.026  Score=54.65  Aligned_cols=50  Identities=24%  Similarity=0.292  Sum_probs=41.5

Q ss_pred             cccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHH
Q 009464          378 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETV  427 (534)
Q Consensus       378 ~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~  427 (534)
                      ...+++||+|+|+|+|..|.-=+..|.+.|++|+|++.+. +....+....
T Consensus         6 l~~~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~   56 (210)
T COG1648           6 LFLDLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEG   56 (210)
T ss_pred             eEEEcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhc
Confidence            3467899999999999999999999999999999998776 5555555543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.95  E-value=0.02  Score=59.18  Aligned_cols=69  Identities=33%  Similarity=0.466  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccc---cccccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA---DLENFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~---~~~~~~~~~~divVn~t~  453 (534)
                      .|++++|+|+||.|-.+++.+...|++|+.++|+.+|. +++++++.+. .+..   ..+. ..+.+|+++++++
T Consensus       166 pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~-e~a~~lGAd~~i~~~~~~~~~~-~~~~~d~ii~tv~  238 (339)
T COG1064         166 PGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKL-ELAKKLGADHVINSSDSDALEA-VKEIADAIIDTVG  238 (339)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHH-HHHHHhCCcEEEEcCCchhhHH-hHhhCcEEEECCC
Confidence            47899999999999999998888999999999999886 5566776543 2221   1111 1223899999887

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.94  E-value=0.016  Score=58.00  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=39.1

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHc
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKG---ARVVIANRTYDRARELAETVG  428 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G---~~v~i~~R~~~~a~~la~~~~  428 (534)
                      .++.|+|+|.+|.+++..|.+.|   .+|++++|+.++++.+.+.++
T Consensus         3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g   49 (267)
T PRK11880          3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYG   49 (267)
T ss_pred             CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcC
Confidence            46899999999999999999998   589999999999888877654

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.93  E-value=0.021  Score=58.05  Aligned_cols=40  Identities=23%  Similarity=0.345  Sum_probs=36.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  425 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~  425 (534)
                      ++.|+|+|.+|..++..|++.|.+|++++|+.++.+.+.+
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   41 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNE   41 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHH
Confidence            5899999999999999999999999999998888777654

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=95.91  E-value=0.018  Score=63.24  Aligned_cols=40  Identities=20%  Similarity=0.181  Sum_probs=36.5

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA  424 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la  424 (534)
                      ++|.|||+|-||.++|..|+..|.+|++++|+.++.+.+.
T Consensus         5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~   44 (495)
T PRK07531          5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIG   44 (495)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            4799999999999999999999999999999999877653

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.90  E-value=0.012  Score=62.80  Aligned_cols=38  Identities=26%  Similarity=0.334  Sum_probs=35.0

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ..+.||++.|+|.|.+|+.+|..+...|.+|+.++|+.
T Consensus       147 ~~L~gktvGIiG~G~IG~~vA~~~~~fGm~V~~~d~~~  184 (409)
T PRK11790        147 FEVRGKTLGIVGYGHIGTQLSVLAESLGMRVYFYDIED  184 (409)
T ss_pred             ccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc
Confidence            45789999999999999999999999999999999864

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.88  E-value=0.014  Score=57.31  Aligned_cols=35  Identities=23%  Similarity=0.374  Sum_probs=31.9

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      +++++|+|+|.||+|..++..|++.|+ ++++++.+
T Consensus         9 L~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           9 LRNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HhCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            567899999999999999999999999 99998854

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=95.87  E-value=0.017  Score=57.19  Aligned_cols=43  Identities=28%  Similarity=0.507  Sum_probs=38.5

Q ss_pred             EEEEEcC-chhHHHHHHHHHH----CCCeEEEEeCCHHHHHHHHHHHc
Q 009464          386 LFVVIGA-GGAGKALAYGAKA----KGARVVIANRTYDRARELAETVG  428 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~----~G~~v~i~~R~~~~a~~la~~~~  428 (534)
                      .++|+|+ +|+|++++..|++    .|++|++++|+.++++++++++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~   49 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIG   49 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHH
Confidence            5899999 7999999999997    79999999999999988887763

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=95.83  E-value=0.034  Score=58.43  Aligned_cols=136  Identities=21%  Similarity=0.192  Sum_probs=83.8

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH------------------HHHHHHHHHcCcccccccccccC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD------------------RARELAETVGGHALSLADLENFN  441 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~------------------~a~~la~~~~~~~~~~~~~~~~~  441 (534)
                      .+++|++|.|=|.|.+|+-+|+.|.+.|++|+.++-+..                  +.+.+.+..+.+.++-+++   .
T Consensus       203 ~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~~~v~~~~ga~~i~~~e~---~  279 (411)
T COG0334         203 DDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERRGSVAEYAGAEYITNEEL---L  279 (411)
T ss_pred             CCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhhhhHHhhcCceEcccccc---c
Confidence            358999999999999999999999999999888876555                  3333433333222222222   2


Q ss_pred             CCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccH---------HHHHHHHHH
Q 009464          442 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL---------EMFIGQAYE  512 (534)
Q Consensus       442 ~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl---------~ml~~Qa~~  512 (534)
                      ...+||++-|+--+.   .+..  ....+.. .+|....-+|...+......++|+-+++..         +-|-++...
T Consensus       280 ~~~cDIl~PcA~~n~---I~~~--na~~l~a-k~V~EgAN~P~t~eA~~i~~erGIl~~PD~laNAGGV~vS~~E~~qn~  353 (411)
T COG0334         280 EVDCDILIPCALENV---ITED--NADQLKA-KIVVEGANGPTTPEADEILLERGILVVPDILANAGGVIVSYLEWVQNA  353 (411)
T ss_pred             cccCcEEcccccccc---cchh--hHHHhhh-cEEEeccCCCCCHHHHHHHHHCCCEEcChhhccCcCeeeehHHHHhhc
Confidence            235899987763221   1111  1123333 378888878877666677778876544422         233445556


Q ss_pred             HHHHhcCCCCCH
Q 009464          513 QYERFTGLPAPK  524 (534)
Q Consensus       513 qf~lwtg~~~p~  524 (534)
                      |-..|+-.++..
T Consensus       354 ~~~~wt~eev~~  365 (411)
T COG0334         354 QGLYWTEEEVDE  365 (411)
T ss_pred             ccCccCHHHHHH
Confidence            666777655444

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.82  E-value=0.024  Score=58.58  Aligned_cols=75  Identities=19%  Similarity=0.266  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHc------Ccc--cc-cccccccCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG------GHA--LS-LADLENFNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~------~~~--~~-~~~~~~~~~~~~divVn~t  452 (534)
                      +.+++.|+|+|.+|.++++.++..|. +|+++++++++++..+-++.      ...  +. ..+.+  .+..+|+||+++
T Consensus         5 ~~~KI~IIGaG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~--~l~~aDiVI~ta   82 (321)
T PTZ00082          5 KRRKISLIGSGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYE--DIAGSDVVIVTA   82 (321)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCHH--HhCCCCEEEECC
Confidence            34789999999999999999999996 99999999886543222211      000  11 12332  346789999999


Q ss_pred             CCCCCCC
Q 009464          453 SIGMQPK  459 (534)
Q Consensus       453 ~~g~~~~  459 (534)
                      +++..|.
T Consensus        83 g~~~~~~   89 (321)
T PTZ00082         83 GLTKRPG   89 (321)
T ss_pred             CCCCCCC
Confidence            8876543

>PRK08507 prephenate dehydrogenase; Validated

Probab=95.81  E-value=0.016  Score=58.54  Aligned_cols=111  Identities=13%  Similarity=0.163  Sum_probs=70.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  463 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~  463 (534)
                      ++.|+|.|.||.+++..|.+.|.  +|++++|+.++.+.+. ..+... ...+..+ . ..+|+||-|+|....... ..
T Consensus         2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~-~~g~~~-~~~~~~~-~-~~aD~Vilavp~~~~~~~-~~   76 (275)
T PRK08507          2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKAL-ELGLVD-EIVSFEE-L-KKCDVIFLAIPVDAIIEI-LP   76 (275)
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHH-HCCCCc-ccCCHHH-H-hcCCEEEEeCcHHHHHHH-HH
Confidence            58899999999999999999996  7999999998877654 333210 1112222 1 238999999986532110 00


Q ss_pred             CCCccccCCCCEEEEEecCCChhHHHHHHHHC-CCeEeccHHH
Q 009464          464 PIPKHALGHYALVFDAVYTPKITRLLREAEES-GATIVSGLEM  505 (534)
Q Consensus       464 ~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~-G~~ii~Gl~m  505 (534)
                      .+..  +.++.+++|+...  ...+.+.+.+. +..++.+-.|
T Consensus        77 ~l~~--l~~~~iv~d~gs~--k~~i~~~~~~~~~~~~v~~hPm  115 (275)
T PRK08507         77 KLLD--IKENTTIIDLGST--KAKIIESVPKHIRKNFIAAHPM  115 (275)
T ss_pred             HHhc--cCCCCEEEECccc--hHHHHHHHHHhcCCCEEecCCc
Confidence            1211  5567789997543  44555555443 3467766666

>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related

Probab=95.80  E-value=0.16  Score=50.41  Aligned_cols=136  Identities=19%  Similarity=0.212  Sum_probs=82.2

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEE--------eC---CHHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA--------NR---TYDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~--------~R---~~~~a~~la~  425 (534)
                      +.|...+++..+....      ..++++++++|-|.|.+|..++..|.+.|++|+.+        +.   +.+...++.+
T Consensus        11 g~GV~~~~~~~~~~~~------~~~l~g~~v~IqGfG~VG~~~a~~l~~~Ga~vv~vsD~~G~i~~~~Gld~~~l~~~~~   84 (244)
T PF00208_consen   11 GYGVAYAIEAALEHLG------GDSLEGKRVAIQGFGNVGSHAARFLAELGAKVVAVSDSSGAIYDPDGLDVEELLRIKE   84 (244)
T ss_dssp             HHHHHHHHHHHHHHTT------CHSSTTCEEEEEESSHHHHHHHHHHHHTTEEEEEEEESSEEEEETTEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcC------CCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCceEEEcCCCchHHHHHHHHH
Confidence            5677777776554311      23588999999999999999999999999976655        33   3344444444


Q ss_pred             HHcCcccccc-----c---cc---ccCCCCceEEEEcCCCCCCCCCCCCCCCccccC-CCCEEEEEecCCChhHHHHHHH
Q 009464          426 TVGGHALSLA-----D---LE---NFNPEDGMILANTTSIGMQPKVDETPIPKHALG-HYALVFDAVYTPKITRLLREAE  493 (534)
Q Consensus       426 ~~~~~~~~~~-----~---~~---~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~-~~~~v~Dv~y~p~~T~ll~~A~  493 (534)
                      +.+.....+.     .   +.   ++...++||+|-|+--+.   .+...++ ..++ ...+++.-..+|...+-.+..+
T Consensus        85 ~~~~~v~~~~~~~~~~~~~~~~~~~il~~~~DiliP~A~~~~---I~~~~~~-~~i~~~akiIvegAN~p~t~~a~~~L~  160 (244)
T PF00208_consen   85 ERGSRVDDYPLESPDGAEYIPNDDEILSVDCDILIPCALGNV---INEDNAP-SLIKSGAKIIVEGANGPLTPEADEILR  160 (244)
T ss_dssp             HHSSHSTTGTHTCSSTSEEECHHCHGGTSSSSEEEEESSSTS---BSCHHHC-HCHHTT-SEEEESSSSSBSHHHHHHHH
T ss_pred             HhCCcccccccccccceeEeccccccccccccEEEEcCCCCe---eCHHHHH-HHHhccCcEEEeCcchhccHHHHHHHH
Confidence            5443122221     0   11   111237899998853221   1111111 0222 2578999998888666667778


Q ss_pred             HCCCeEecc
Q 009464          494 ESGATIVSG  502 (534)
Q Consensus       494 ~~G~~ii~G  502 (534)
                      ++|+.+++.
T Consensus       161 ~rGI~viPD  169 (244)
T PF00208_consen  161 ERGILVIPD  169 (244)
T ss_dssp             HTT-EEE-H
T ss_pred             HCCCEEEcc
Confidence            999877753

They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.77  E-value=0.025  Score=48.83  Aligned_cols=67  Identities=31%  Similarity=0.350  Sum_probs=48.4

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----CcccccccccccCCCCceEEEEcCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ++|+|.|.+|+.++..|.+.+.+|+++++++++.+++.+..-    ++..+.+.+.+....+++.+|-+++
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            589999999999999999966699999999999888876541    1122222333334567888887775

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=95.76  E-value=0.019  Score=58.42  Aligned_cols=115  Identities=19%  Similarity=0.178  Sum_probs=83.0

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccc-----cccccCCCCceEEEEcCCCCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA-----DLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~-----~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      ...+|.|| |-+|+-+|.+|+..|.+..+.+||.+|...+...++.+...|.     .+.+ .....++|+||+|.-.. 
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~-~~~~~~VVlncvGPyt~-   84 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEA-MASRTQVVLNCVGPYTR-   84 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHH-HHhcceEEEeccccccc-
Confidence            56899999 9999999999999999999999999999999999986654332     1223 34578999999874321 


Q ss_pred             CCCCCCCCccccCCCCEEEEEecCCC--hh---HHHHHHHHCCCeEeccH
Q 009464          459 KVDETPIPKHALGHYALVFDAVYTPK--IT---RLLREAEESGATIVSGL  503 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~y~p~--~T---~ll~~A~~~G~~ii~Gl  503 (534)
                        ...|+-......+.-.+|+.=-..  ++   ..-++|++.|+.|++|.
T Consensus        85 --~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~c  132 (382)
T COG3268          85 --YGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGC  132 (382)
T ss_pred             --cccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccC
Confidence              234555556666777888852211  11   11346778899999875

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.73  E-value=0.0087  Score=53.24  Aligned_cols=110  Identities=25%  Similarity=0.253  Sum_probs=61.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeE-EEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARV-VIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  463 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v-~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~  463 (534)
                      -++-|||+|-+|.+++.+|.+.|+.| -+++|+.+.++.++..++...  ..++.+ ....+|+++-++|-..-...- .
T Consensus        11 l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~--~~~~~~-~~~~aDlv~iavpDdaI~~va-~   86 (127)
T PF10727_consen   11 LKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGA--ILDLEE-ILRDADLVFIAVPDDAIAEVA-E   86 (127)
T ss_dssp             -EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-------TTG-GGCC-SEEEE-S-CCHHHHHH-H
T ss_pred             cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccc--cccccc-ccccCCEEEEEechHHHHHHH-H
Confidence            47999999999999999999999976 456899988888887765432  122223 234689999888622100000 0


Q ss_pred             CCCc-cccCCCCEEEEEecCCChhHHHHHHHHCCCeE
Q 009464          464 PIPK-HALGHYALVFDAVYTPKITRLLREAEESGATI  499 (534)
Q Consensus       464 ~i~~-~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~i  499 (534)
                      .+.. ..+.++.+|+-.+ .......|+-++++|+.+
T Consensus        87 ~La~~~~~~~g~iVvHtS-Ga~~~~vL~p~~~~Ga~~  122 (127)
T PF10727_consen   87 QLAQYGAWRPGQIVVHTS-GALGSDVLAPARERGAIV  122 (127)
T ss_dssp             HHHCC--S-TT-EEEES--SS--GGGGHHHHHTT-EE
T ss_pred             HHHHhccCCCCcEEEECC-CCChHHhhhhHHHCCCeE
Confidence            0101 1244566777665 334567778888999864

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=95.70  E-value=0.027  Score=57.88  Aligned_cols=69  Identities=32%  Similarity=0.427  Sum_probs=52.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      .-+.||+++|.|-|-.||.+|..|...|++|+|+.-++-+|-+.+-+ +.++.++++.    ....||+|.|||
T Consensus       205 ~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~Md-Gf~V~~m~~A----a~~gDifiT~TG  273 (420)
T COG0499         205 VLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMD-GFRVMTMEEA----AKTGDIFVTATG  273 (420)
T ss_pred             eeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhhc-CcEEEEhHHh----hhcCCEEEEccC
Confidence            45789999999999999999999999999999999888776443311 1234444443    335688888886

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.68  E-value=0.017  Score=61.40  Aligned_cols=40  Identities=25%  Similarity=0.263  Sum_probs=35.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHH
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRA  420 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a  420 (534)
                      ...+++++|+|+ |.+|+.++..|.+.|++|+++.|+.++.
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~   97 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGI   97 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhc
Confidence            456789999999 9999999999999999999999987653

>KOG3007 consensus Mu-crystallin [Amino acid transport and metabolism]

Probab=95.66  E-value=0.083  Score=52.19  Aligned_cols=115  Identities=19%  Similarity=0.131  Sum_probs=82.1

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCC--C-eEEEEeCCHHHHHHHHHHHcCcc-------cccccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKG--A-RVVIANRTYDRARELAETVGGHA-------LSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G--~-~v~i~~R~~~~a~~la~~~~~~~-------~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      ...+++|+|-.|.-.++...+.-  . +|.|+||+.+.|+++|+.+....       ...+.++. +....||++.+|..
T Consensus       139 ~vL~i~GsG~qA~~hi~ih~~~~pslreVrIwnht~e~A~~la~~lsk~~~~iqie~~~~qsl~~-aV~~sDIIs~atls  217 (333)
T KOG3007|consen  139 CVLTIFGSGLQAFWHIYIHIKLIPSLREVRIWNHTNEMALDLAKSLSKLFSNIQIELNQYQSLNG-AVSNSDIISGATLS  217 (333)
T ss_pred             eEEEEEcccchhHHHHHHHHHhcccceEEEeecCChHHHHHHHHHhhhcccceEEEEEehhhhhc-ccccCceEEecccc
Confidence            46778899999998888766653  3 89999999999999999775422       22333444 56678999998863


Q ss_pred             CCCCCCCCCCCCccccCCCCEEEEEe--cCCChhHHHHHHHHCCCeEeccHHHHH
Q 009464          455 GMQPKVDETPIPKHALGHYALVFDAV--YTPKITRLLREAEESGATIVSGLEMFI  507 (534)
Q Consensus       455 g~~~~~~~~~i~~~~l~~~~~v~Dv~--y~p~~T~ll~~A~~~G~~ii~Gl~ml~  507 (534)
                      . .|     .+-.+|++++ .-+|++  |+|...++=+++-+.+|..|+-.+--+
T Consensus       218 t-eP-----ilfgewlkpg-thIdlVGsf~p~mhEcDdelIq~a~vfVDsre~aL  265 (333)
T KOG3007|consen  218 T-EP-----ILFGEWLKPG-THIDLVGSFKPVMHECDDELIQSACVFVDSREHAL  265 (333)
T ss_pred             C-Cc-----eeeeeeecCC-ceEeeeccCCchHHHHhHHHhhhheEEEecchHHh
Confidence            2 22     1335677775 567887  778777777777778888888754433

>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed

Probab=95.64  E-value=0.053  Score=61.82  Aligned_cols=178  Identities=19%  Similarity=0.244  Sum_probs=97.2

Q ss_pred             ccHHHHHHHhc--CCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEeccCCeEEEEecc-HHHHHHHHHhhhcc
Q 009464          294 DDIAKFFQTYS--SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTD-YVGAISAIEDGLRG  370 (534)
Q Consensus       294 ~~~~~~~~~~~--~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~~~g~l~G~NTD-~~G~~~~l~~~l~~  370 (534)
                      +|.++|++..+  .+.|+|+|.--=--.+.+..++++.+.      .|.-++.  |. .+|+-.= ..|++++++-    
T Consensus       112 ~d~de~v~~v~~~~p~~g~i~~ED~~~p~~f~i~~~~~~~------~~ip~f~--DD-~~GTa~v~lA~l~na~~~----  178 (752)
T PRK07232        112 EDPDKFIEAVAALEPTFGGINLEDIKAPECFYIEEKLRER------MDIPVFH--DD-QHGTAIISAAALLNALEL----  178 (752)
T ss_pred             CCHHHHHHHHHHhCCCccEEeeeecCCchHHHHHHHHHHh------cCCCeec--cc-cchHHHHHHHHHHHHHHH----
Confidence            46777777663  578999987543334445444443321      2222232  11 2222111 2344444432    


Q ss_pred             CCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC---eEEEEeCC----HHH---HHHHHHHHcCccccccccccc
Q 009464          371 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA---RVVIANRT----YDR---ARELAETVGGHALSLADLENF  440 (534)
Q Consensus       371 ~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~---~v~i~~R~----~~~---a~~la~~~~~~~~~~~~~~~~  440 (534)
                             .+.+++..++++.|||.+|-+++..|...|.   +++++++.    .++   .......|... .+..++.+ 
T Consensus       179 -------~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~~~~~~k~~~a~~-~~~~~l~~-  249 (752)
T PRK07232        179 -------VGKKIEDVKIVVSGAGAAAIACLNLLVALGAKKENIIVCDSKGVIYKGRTEGMDEWKAAYAVD-TDARTLAE-  249 (752)
T ss_pred             -------hCCChhhcEEEEECccHHHHHHHHHHHHcCCCcccEEEEcCCCeecCCCcccccHHHHHHhcc-CCCCCHHH-
Confidence                   1356778899999999999999999999998   79988853    111   22222223211 12234444 


Q ss_pred             CCCCceEEEEcCCCCCCCCCCCCCCCcccc---CCCCEEEEEecCCC--hhHHHHHHHHC--CCeEeccHH
Q 009464          441 NPEDGMILANTTSIGMQPKVDETPIPKHAL---GHYALVFDAVYTPK--ITRLLREAEES--GATIVSGLE  504 (534)
Q Consensus       441 ~~~~~divVn~t~~g~~~~~~~~~i~~~~l---~~~~~v~Dv~y~p~--~T~ll~~A~~~--G~~ii~Gl~  504 (534)
                      ....+|++|-.+..|        -|.++++   .+..++|-+. +|.  .||  .+|.+.  |+.+-.|.+
T Consensus       250 ~i~~~~v~iG~s~~g--------~~~~~~v~~M~~~piifals-NP~~E~~p--~~a~~~~~~~i~atGrs  309 (752)
T PRK07232        250 AIEGADVFLGLSAAG--------VLTPEMVKSMADNPIIFALA-NPDPEITP--EEAKAVRPDAIIATGRS  309 (752)
T ss_pred             HHcCCCEEEEcCCCC--------CCCHHHHHHhccCCEEEecC-CCCccCCH--HHHHHhcCCEEEEECCc
Confidence            445589999765422        1333332   3467888887 443  344  334443  344445544

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=95.64  E-value=0.024  Score=55.27  Aligned_cols=69  Identities=22%  Similarity=0.314  Sum_probs=46.5

Q ss_pred             EEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHc---Ccc----ccccccc---cc------CCCCceEE
Q 009464          387 FVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLADLE---NF------NPEDGMIL  448 (534)
Q Consensus       387 vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~---~~~----~~~~~~~---~~------~~~~~div  448 (534)
                      ++|+|+ ||+|++++..|++.|++|+++.|+ .++.+++.+++.   .+.    .++.+..   .+      ..+..|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589998 899999999999999998888754 556666665542   111    1221111   10      23467999


Q ss_pred             EEcCCCC
Q 009464          449 ANTTSIG  455 (534)
Q Consensus       449 Vn~t~~g  455 (534)
                      |++++..
T Consensus        81 i~~ag~~   87 (239)
T TIGR01831        81 VLNAGIT   87 (239)
T ss_pred             EECCCCC
Confidence            9998764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.64  E-value=0.057  Score=58.83  Aligned_cols=35  Identities=20%  Similarity=0.211  Sum_probs=32.0

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      +.+|+++|+|.|-.|++++..|.+.|++|++++-+
T Consensus         6 ~~~~~v~v~G~G~sG~~~~~~l~~~g~~v~~~d~~   40 (468)
T PRK04690          6 LEGRRVALWGWGREGRAAYRALRAHLPAQALTLFC   40 (468)
T ss_pred             cCCCEEEEEccchhhHHHHHHHHHcCCEEEEEcCC
Confidence            56899999999999999999999999999999843

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.63  E-value=0.043  Score=56.44  Aligned_cols=71  Identities=18%  Similarity=0.286  Sum_probs=52.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc-c------ccccccccCCCCceEEEEcCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-L------SLADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~-~------~~~~~~~~~~~~~divVn~t~~g~  456 (534)
                      ++.|+|+|.+|.++++.|+..|.  +|++++|+.++++..+.++.... .      ...+.+  ....+|++|.+++...
T Consensus         2 kI~IIGaG~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~--~l~~aDiViita~~~~   79 (308)
T cd05292           2 KVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYA--DCKGADVVVITAGANQ   79 (308)
T ss_pred             EEEEECCCHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHH--HhCCCCEEEEccCCCC
Confidence            58999999999999999999994  89999999988876555553211 0      001221  3467899999998865


Q ss_pred             CC
Q 009464          457 QP  458 (534)
Q Consensus       457 ~~  458 (534)
                      .+
T Consensus        80 ~~   81 (308)
T cd05292          80 KP   81 (308)
T ss_pred             CC
Confidence            54

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02858 fructose-bisphosphate aldolase

Probab=95.61  E-value=0.025  Score=69.07  Aligned_cols=107  Identities=19%  Similarity=0.159  Sum_probs=71.0

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  463 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~  463 (534)
                      .+++-+||-|-||..+|..|.+.|++|+++||+.++++.+++. +...  .+...+ ....+|+||-+.+-...  ....
T Consensus         4 ~~~IGfIGLG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~-Ga~~--~~s~~e-~a~~advVi~~l~~~~~--v~~V   77 (1378)
T PLN02858          4 AGVVGFVGLDSLSFELASSLLRSGFKVQAFEISTPLMEKFCEL-GGHR--CDSPAE-AAKDAAALVVVLSHPDQ--VDDV   77 (1378)
T ss_pred             CCeEEEEchhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc-CCee--cCCHHH-HHhcCCEEEEEcCChHH--HHHH
Confidence            4679999999999999999999999999999999999998764 2221  112222 22357888887653211  0111


Q ss_pred             CCCc----cccCCCCEEEEEecC-CChh-HHHHHHHHCC
Q 009464          464 PIPK----HALGHYALVFDAVYT-PKIT-RLLREAEESG  496 (534)
Q Consensus       464 ~i~~----~~l~~~~~v~Dv~y~-p~~T-~ll~~A~~~G  496 (534)
                      .+..    ..+.++.+++|+... |..+ .+.+.++++|
T Consensus        78 ~~g~~g~~~~l~~g~iivd~STi~p~~~~~la~~l~~~g  116 (1378)
T PLN02858         78 FFGDEGAAKGLQKGAVILIRSTILPLQLQKLEKKLTERK  116 (1378)
T ss_pred             HhchhhHHhcCCCcCEEEECCCCCHHHHHHHHHHHHhcC
Confidence            1111    124567899999865 4333 4555566777

>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.61  E-value=0.078  Score=57.57  Aligned_cols=39  Identities=36%  Similarity=0.445  Sum_probs=34.5

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHH
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRA  420 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a  420 (534)
                      +++++++|+|.||+|+++|..|.++|++|+++++.....
T Consensus         7 ~~~~~i~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~   45 (460)
T PRK01390          7 FAGKTVAVFGLGGSGLATARALVAGGAEVIAWDDNPASR   45 (460)
T ss_pred             cCCCEEEEEeecHhHHHHHHHHHHCCCEEEEECCChhhH
Confidence            567899999999999999999999999999999775433

>PRK07680 late competence protein ComER; Validated

Probab=95.60  E-value=0.021  Score=57.54  Aligned_cols=119  Identities=17%  Similarity=0.102  Sum_probs=69.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHHHHc-CcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA----RVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~----~v~i~~R~~~~a~~la~~~~-~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      ++.|+|+|.||.+++..|.+.|.    +|++++|+.++++.+++.+. ...  ..+..+ ....+|+||-+++.......
T Consensus         2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~--~~~~~~-~~~~aDiVilav~p~~~~~v   78 (273)
T PRK07680          2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHV--AKTIEE-VISQSDLIFICVKPLDIYPL   78 (273)
T ss_pred             EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEE--ECCHHH-HHHhCCEEEEecCHHHHHHH
Confidence            48899999999999999999983    79999999999988877652 221  112222 23457899888753211000


Q ss_pred             CCCCCCccccCCCCEEEEEecCCChhHHHHHHHH-CCCeEeccHHHHHHHH
Q 009464          461 DETPIPKHALGHYALVFDAVYTPKITRLLREAEE-SGATIVSGLEMFIGQA  510 (534)
Q Consensus       461 ~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~-~G~~ii~Gl~ml~~Qa  510 (534)
                       ...+. ..+.+..+++++. ++....-++.... ..++++++....+.++
T Consensus        79 -l~~l~-~~l~~~~~iis~~-ag~~~~~L~~~~~~~~~r~~p~~~~~~~~G  126 (273)
T PRK07680         79 -LQKLA-PHLTDEHCLVSIT-SPISVEQLETLVPCQVARIIPSITNRALSG  126 (273)
T ss_pred             -HHHHH-hhcCCCCEEEEEC-CCCCHHHHHHHcCCCEEEECCChHHHHhhc
Confidence             00011 1344556788886 3333333332221 2345666544333333

>PLN02427 UDP-apiose/xylose synthase

Probab=95.56  E-value=0.019  Score=60.75  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=50.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHH----c--Ccc--cccc---cccccCCCCce
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRARELAETV----G--GHA--LSLA---DLENFNPEDGM  446 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~----~--~~~--~~~~---~~~~~~~~~~d  446 (534)
                      ..++.++|+|+|+ |-+|+.++..|.+.| .+|++++|+.++.+.+....    .  .+.  .++.   .+.+ ...++|
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~-~~~~~d   88 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEG-LIKMAD   88 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHH-HhhcCC
Confidence            3456678999998 999999999999984 79999999877665543211    0  011  1221   2222 344689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||+++..
T Consensus        89 ~ViHlAa~~   97 (386)
T PLN02427         89 LTINLAAIC   97 (386)
T ss_pred             EEEEccccc
Confidence            999998753

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.56  E-value=0.015  Score=59.71  Aligned_cols=35  Identities=37%  Similarity=0.437  Sum_probs=32.3

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +.++.|+|+|-+|.+++..|.+.|.+|++++|+.+
T Consensus         4 ~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          4 PKTIAILGAGAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            46899999999999999999999999999999853

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=95.55  E-value=0.015  Score=60.34  Aligned_cols=34  Identities=29%  Similarity=0.225  Sum_probs=30.9

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      |++||+|| |.+|+.++..|.+.|++|++++|+.+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            58999999 99999999999999999999998753

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.55  E-value=0.045  Score=56.36  Aligned_cols=72  Identities=19%  Similarity=0.234  Sum_probs=53.7

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc-------cc-cccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LS-LADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~-------~~-~~~~~~~~~~~~divVn~t~~  454 (534)
                      .++.|+|+|.+|.++++.|+..|.  ++++++++.++++..+.++....       +. ..+.+  ...++|+||.+++.
T Consensus         4 ~Ki~IiGaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~--~~~~adivvitaG~   81 (312)
T cd05293           4 NKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS--VTANSKVVIVTAGA   81 (312)
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH--HhCCCCEEEECCCC
Confidence            489999999999999999998886  79999999888877776664211       11 11222  24578999999987


Q ss_pred             CCCC
Q 009464          455 GMQP  458 (534)
Q Consensus       455 g~~~  458 (534)
                      ...|
T Consensus        82 ~~k~   85 (312)
T cd05293          82 RQNE   85 (312)
T ss_pred             CCCC
Confidence            6544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=95.54  E-value=0.057  Score=53.74  Aligned_cols=130  Identities=18%  Similarity=0.189  Sum_probs=77.6

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEE-EEeC----------CHHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~-i~~R----------~~~~a~~la~  425 (534)
                      +.|...+++..+...       +.+++|++++|-|-|.+|+.++..|.+.|++|+ |.+.          +.+....+.+
T Consensus        18 g~Gv~~~~~~~~~~~-------~~~l~g~~vaIqGfGnVG~~~a~~L~e~GakvvaVsD~~G~i~~~~Gld~~~l~~l~~   90 (254)
T cd05313          18 GYGLVYFVEEMLKDR-------NETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKE   90 (254)
T ss_pred             HHHHHHHHHHHHHhc-------CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCceEECCCCCCHHHHHHHHH
Confidence            678888777655432       357899999999999999999999999999877 6552          3333433221


Q ss_pred             HH---cCcccc-------cc--cccccCCCCceEEEEcCCCCCCCCCCCCCCCcc---ccC--CCCEEEEEecCCChhHH
Q 009464          426 TV---GGHALS-------LA--DLENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALG--HYALVFDAVYTPKITRL  488 (534)
Q Consensus       426 ~~---~~~~~~-------~~--~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~---~l~--~~~~v~Dv~y~p~~T~l  488 (534)
                      .-   ......       .+  +-.++....+||++-|+--+.        +..+   .+.  ...+++...-+|.....
T Consensus        91 ~~~~~~~~v~~~~~~~~~a~~~~~~~~~~~~~DIliPcAl~~~--------I~~~na~~i~~~~ak~I~EgAN~p~t~~a  162 (254)
T cd05313          91 IKEVRRGRVSEYAKKYGTAKYFEGKKPWEVPCDIAFPCATQNE--------VDAEDAKLLVKNGCKYVAEGANMPCTAEA  162 (254)
T ss_pred             HHHhcCCcHHHHhhcCCCCEEeCCcchhcCCCcEEEecccccc--------CCHHHHHHHHHcCCEEEEeCCCCCCCHHH
Confidence            11   100000       01  111112236899998864221        2222   232  34688888877764444


Q ss_pred             HHHHHHCCCeEec
Q 009464          489 LREAEESGATIVS  501 (534)
Q Consensus       489 l~~A~~~G~~ii~  501 (534)
                      -+.-+++|+.+++
T Consensus       163 ~~~L~~rGI~vvP  175 (254)
T cd05313         163 IEVFRQAGVLFAP  175 (254)
T ss_pred             HHHHHHCCcEEEC
Confidence            4445677776655

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>PLN02240 UDP-glucose 4-epimerase

Probab=95.53  E-value=0.022  Score=59.09  Aligned_cols=35  Identities=26%  Similarity=0.401  Sum_probs=31.7

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~  416 (534)
                      +++|+++|+|+ |++|++++..|.+.|++|++++|.
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~   38 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL   38 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999 999999999999999999998764

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=95.52  E-value=0.047  Score=58.63  Aligned_cols=37  Identities=30%  Similarity=0.363  Sum_probs=33.1

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +.+++|+|+|-|..|++++..|.+.|++|++++.++.
T Consensus         5 ~~~~kv~V~GLG~sG~a~a~~L~~~G~~v~v~D~~~~   41 (448)
T COG0771           5 FQGKKVLVLGLGKSGLAAARFLLKLGAEVTVSDDRPA   41 (448)
T ss_pred             ccCCEEEEEecccccHHHHHHHHHCCCeEEEEcCCCC
Confidence            4589999999999999999999999999999985443

>PRK08818 prephenate dehydrogenase; Provisional

Probab=95.51  E-value=0.0092  Score=62.72  Aligned_cols=105  Identities=14%  Similarity=0.047  Sum_probs=71.9

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~-G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      ..++.|+|. |.||..++.+|.+. |++|+.++|..+.              ..+..+ ...++|+||-|+|+......-
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~--------------~~~~~~-~v~~aDlVilavPv~~~~~~l   68 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG--------------SLDPAT-LLQRADVLIFSAPIRHTAALI   68 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc--------------cCCHHH-HhcCCCEEEEeCCHHHHHHHH
Confidence            468999999 99999999999975 6799999885221              111222 245689999999986421100


Q ss_pred             CCCCCc--cccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHH
Q 009464          462 ETPIPK--HALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       462 ~~~i~~--~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                       ..+..  ..++++.++.|+.-.  .+..++.+.+.++.++.|=.|+
T Consensus        69 -~~l~~~~~~l~~~~iVtDVgSv--K~~i~~~~~~~~~~fVG~HPMa  112 (370)
T PRK08818         69 -EEYVALAGGRAAGQLWLDVTSI--KQAPVAAMLASQAEVVGLHPMT  112 (370)
T ss_pred             -HHHhhhhcCCCCCeEEEECCCC--cHHHHHHHHhcCCCEEeeCCCC
Confidence             00111  126788899999754  4666677777777788877777

>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS)

Probab=95.49  E-value=0.34  Score=46.18  Aligned_cols=130  Identities=18%  Similarity=0.151  Sum_probs=80.0

Q ss_pred             eEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhh-CCCcEEEEeccCCCCCCCCCCHHHHHH
Q 009464           24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SPVPTLFTYRPIWEGGQYDGDENERVD  102 (534)
Q Consensus        24 ~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~  102 (534)
                      +.||+.|-..+.++...-++..... +|++|+-..+....- .+.++.+++. .+.|++.+.-.. ..+       .  .
T Consensus         1 ~~~~~a~d~~~~~~~~~~~~~l~~~-i~~ieig~~~~~~~g-~~~i~~i~~~~~~~~i~~~~~v~-~~~-------~--~   68 (202)
T cd04726           1 PLLQVALDLLDLEEALELAKKVPDG-VDIIEAGTPLIKSEG-MEAVRALREAFPDKIIVADLKTA-DAG-------A--L   68 (202)
T ss_pred             CceEEEEcCCCHHHHHHHHHHhhhc-CCEEEcCCHHHHHhC-HHHHHHHHHHCCCCEEEEEEEec-ccc-------H--H
Confidence            4689999999999999888876555 999999766654322 3467777765 478988864432 111       1  2


Q ss_pred             HHHHHHHhCCcEEEEeccccchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 009464          103 VLRLAMELGADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (534)
Q Consensus       103 ~l~~~~~~~~~~iDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Ki  172 (534)
                      .++.+.+.|++++=+=.....+..+++.. .+..+.++++.-+... ||  ++..   + +...|+|++++
T Consensus        69 ~~~~~~~aGad~i~~h~~~~~~~~~~~i~~~~~~g~~~~v~~~~~~-t~--~e~~---~-~~~~~~d~v~~  132 (202)
T cd04726          69 EAEMAFKAGADIVTVLGAAPLSTIKKAVKAAKKYGKEVQVDLIGVE-DP--EKRA---K-LLKLGVDIVIL  132 (202)
T ss_pred             HHHHHHhcCCCEEEEEeeCCHHHHHHHHHHHHHcCCeEEEEEeCCC-CH--HHHH---H-HHHCCCCEEEE
Confidence            34677788999877644433222222221 2345677776544321 22  2332   2 55568888888

KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.

>PLN02688 pyrroline-5-carboxylate reductase

Probab=95.47  E-value=0.027  Score=56.36  Aligned_cols=64  Identities=22%  Similarity=0.253  Sum_probs=45.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA----RVVIA-NRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~----~v~i~-~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ++.++|.|.||.+++..|.+.|.    +|+++ +|+.++++.+.+ .+...  ..+..+ .....|+||-|++
T Consensus         2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~-~g~~~--~~~~~e-~~~~aDvVil~v~   70 (266)
T PLN02688          2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQS-LGVKT--AASNTE-VVKSSDVIILAVK   70 (266)
T ss_pred             eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHH-cCCEE--eCChHH-HHhcCCEEEEEEC
Confidence            57899999999999999999997    89999 999999877654 33221  112222 2234677777664

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.42  E-value=0.039  Score=59.60  Aligned_cols=68  Identities=24%  Similarity=0.333  Sum_probs=51.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-----cccccccccCCCCceEEEEcCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-----~~~~~~~~~~~~~~divVn~t~  453 (534)
                      +++|+|+|.+|+.++..|.+.|.+|++++|+.++.+++.+..+...     .+...+.+.....+|.+|.+++
T Consensus         2 ~viIiG~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          2 KIIIVGAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            6899999999999999999999999999999999888766443221     1122233323567899998876

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=95.42  E-value=0.25  Score=53.02  Aligned_cols=151  Identities=19%  Similarity=0.171  Sum_probs=88.2

Q ss_pred             cHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEE-EEeCC----------HHHHHHHH
Q 009464          356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT----------YDRARELA  424 (534)
Q Consensus       356 D~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~-i~~R~----------~~~a~~la  424 (534)
                      .+.|.+.+++..++..       +.+++||+|+|-|.|.+|..+|..|.+.|++|+ +.+.+          .+++..+.
T Consensus       216 TG~Gv~~~~~~~l~~~-------~~~l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~G~iy~~~Gld~~~l~~l~  288 (454)
T PTZ00079        216 TGYGLVYFVLEVLKKL-------NDSLEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSDGYIHEPNGFTKEKLAYLM  288 (454)
T ss_pred             cHHHHHHHHHHHHHHc-------CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCCcEECCCCCCHHHHHHHH
Confidence            3778888877666532       357899999999999999999999999999877 77766          55553333


Q ss_pred             HHHc---Ccccccc---------cccccCCCCceEEEEcCCCCCCCCCCCCCCCccc---c--CCCCEEEEEecCCChhH
Q 009464          425 ETVG---GHALSLA---------DLENFNPEDGMILANTTSIGMQPKVDETPIPKHA---L--GHYALVFDAVYTPKITR  487 (534)
Q Consensus       425 ~~~~---~~~~~~~---------~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~---l--~~~~~v~Dv~y~p~~T~  487 (534)
                      +.-.   .....+.         +-.+.....+||++-|+--+        .+..+.   +  ....+|..-.-.|....
T Consensus       289 ~~k~~~~g~i~~~~~~~~~a~~~~~~~~~~~~cDI~iPcA~~n--------~I~~~~a~~l~~~~ak~V~EgAN~p~t~e  360 (454)
T PTZ00079        289 DLKNVKRGRLKEYAKHSSTAKYVPGKKPWEVPCDIAFPCATQN--------EINLEDAKLLIKNGCKLVAEGANMPTTIE  360 (454)
T ss_pred             HHHhhcCCcHHhhhhccCCcEEeCCcCcccCCccEEEeccccc--------cCCHHHHHHHHHcCCeEEEecCCCCCCHH
Confidence            2110   1000110         11111123589998876322        122221   1  13467888876776444


Q ss_pred             HHHHHHHCCCe------------EeccHHHHHHHHHHHHHHhcCCCCCH
Q 009464          488 LLREAEESGAT------------IVSGLEMFIGQAYEQYERFTGLPAPK  524 (534)
Q Consensus       488 ll~~A~~~G~~------------ii~Gl~ml~~Qa~~qf~lwtg~~~p~  524 (534)
                      ..+.-+++|+.            ++.+++|.   ...+-..|+-.+++.
T Consensus       361 A~~~L~~~GI~~~PD~~aNAGGV~vS~~E~~---Qn~~~~~W~~eeV~~  406 (454)
T PTZ00079        361 ATHLFKKNGVIFCPGKAANAGGVAISGLEMS---QNAARLQWTAEEVDE  406 (454)
T ss_pred             HHHHHHHCCcEEEChhhhcCCCeeeehHHhh---hhhcccCCCHHHHHH
Confidence            44444555554            44555653   344556677544433

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.41  E-value=0.034  Score=56.14  Aligned_cols=97  Identities=21%  Similarity=0.279  Sum_probs=68.6

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc----ccccccccCCCCceEEEEcCCCCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL----SLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~----~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      ....+++|+|+|-+|-..|+-..-.|++|+|.++|.+|.+.+-..++.+..    +...+++ ...++|++|++.=++-.
T Consensus       166 V~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee-~v~~aDlvIgaVLIpga  244 (371)
T COG0686         166 VLPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEE-AVKKADLVIGAVLIPGA  244 (371)
T ss_pred             CCCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHH-HhhhccEEEEEEEecCC
Confidence            345679999999999999999999999999999999999999888876532    2334444 55678999998744321


Q ss_pred             CCCCCCCCCc---cccCCCCEEEEEec
Q 009464          458 PKVDETPIPK---HALGHYALVFDAVY  481 (534)
Q Consensus       458 ~~~~~~~i~~---~~l~~~~~v~Dv~y  481 (534)
                      .  .+..+..   ..++++.+++|+.-
T Consensus       245 k--aPkLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         245 K--APKLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             C--CceehhHHHHHhcCCCcEEEEEEE
Confidence            1  1111222   23566777777763

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.40  E-value=0.035  Score=56.42  Aligned_cols=39  Identities=26%  Similarity=0.281  Sum_probs=35.9

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  423 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~l  423 (534)
                      ++|.|+|+|-||+.+|..|+..|++|++++++++.++..
T Consensus         6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~   44 (286)
T PRK07819          6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAG   44 (286)
T ss_pred             cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            479999999999999999999999999999999987663

>PLN02477 glutamate dehydrogenase

Probab=95.39  E-value=0.21  Score=53.21  Aligned_cols=130  Identities=18%  Similarity=0.254  Sum_probs=78.7

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEE-EEeCC----------HHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT----------YDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~-i~~R~----------~~~a~~la~  425 (534)
                      +.|...+++..++. .      +.+++|++++|.|.|.+|+.++..|.+.|++|+ |.+.+          .+.+.+..+
T Consensus       186 g~Gv~~~~~~~~~~-~------g~~l~g~~VaIqGfGnVG~~~A~~L~e~GakVVaVsD~~G~iy~~~GLD~~~L~~~k~  258 (410)
T PLN02477        186 GRGVVFATEALLAE-H------GKSIAGQTFVIQGFGNVGSWAAQLIHEKGGKIVAVSDITGAVKNENGLDIPALRKHVA  258 (410)
T ss_pred             hHHHHHHHHHHHHH-c------CCCccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCeEECCCCCCHHHHHHHHH
Confidence            67777777765543 1      347889999999999999999999999999887 77766          555544333


Q ss_pred             HHcCccccc---ccc--cccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHH-HHHHCCCeE
Q 009464          426 TVGGHALSL---ADL--ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR-EAEESGATI  499 (534)
Q Consensus       426 ~~~~~~~~~---~~~--~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~-~A~~~G~~i  499 (534)
                      +-+ ....+   +.+  .++....+|++|-|+--+.   .+....  ..+ ...+++...-+|. |+-.. .-+++|+.+
T Consensus       259 ~~g-~l~~~~~a~~i~~~e~l~~~~DvliP~Al~~~---I~~~na--~~i-~ak~I~egAN~p~-t~ea~~~L~~rGI~~  330 (410)
T PLN02477        259 EGG-GLKGFPGGDPIDPDDILVEPCDVLIPAALGGV---INKENA--ADV-KAKFIVEAANHPT-DPEADEILRKKGVVV  330 (410)
T ss_pred             hcC-chhccccceEecCccceeccccEEeecccccc---CCHhHH--HHc-CCcEEEeCCCCCC-CHHHHHHHHHCCcEE
Confidence            221 11111   001  1111236899998863221   111111  122 3468888887787 54333 346677655


Q ss_pred             ec
Q 009464          500 VS  501 (534)
Q Consensus       500 i~  501 (534)
                      ++
T Consensus       331 ~P  332 (410)
T PLN02477        331 LP  332 (410)
T ss_pred             EC
Confidence            54

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.38  E-value=0.082  Score=57.28  Aligned_cols=32  Identities=41%  Similarity=0.468  Sum_probs=29.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +++|+|.|++|+++|+.|.+.|++|+++++..
T Consensus         2 ~v~viG~G~sG~s~a~~l~~~G~~V~~~D~~~   33 (459)
T PRK02705          2 IAHVIGLGRSGIAAARLLKAQGWEVVVSDRND   33 (459)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            58999999999999999999999999999754

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=95.37  E-value=0.071  Score=55.10  Aligned_cols=114  Identities=24%  Similarity=0.271  Sum_probs=71.0

Q ss_pred             cEEEEEcCchhH-HHHHHHHHHCC--C-eEEEEeCCHHHHHHHHHHHcCc--ccccccccccCCCCceEEEEcCCCCCCC
Q 009464          385 KLFVVIGAGGAG-KALAYGAKAKG--A-RVVIANRTYDRARELAETVGGH--ALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       385 k~vlVlGaGG~g-raia~~L~~~G--~-~v~i~~R~~~~a~~la~~~~~~--~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .++.|+|+|+++ +..+..+.+.+  + -+.+++|+.+++++++++++..  ..+++++-+  ...+|+|+.+||...+.
T Consensus         4 irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~--~~~iD~V~Iatp~~~H~   81 (342)
T COG0673           4 IRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAYTDLEELLA--DPDIDAVYIATPNALHA   81 (342)
T ss_pred             eEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcccCCHHHHhc--CCCCCEEEEcCCChhhH
Confidence            479999998666 55777888776  4 5788899999999999999864  234444332  24589999999865432


Q ss_pred             CCCCCCCCccccCCCC-EEEEEecCCC------hhHHHHHHHHCCCeEeccHHHHHH
Q 009464          459 KVDETPIPKHALGHYA-LVFDAVYTPK------ITRLLREAEESGATIVSGLEMFIG  508 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~-~v~Dv~y~p~------~T~ll~~A~~~G~~ii~Gl~ml~~  508 (534)
                      .     +....++.+. ++++   +|.      ...+.+.|+++|..+.-|...-..
T Consensus        82 e-----~~~~AL~aGkhVl~E---KPla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf~  130 (342)
T COG0673          82 E-----LALAALEAGKHVLCE---KPLALTLEEAEELVELARKAGVKLMVGFNRRFD  130 (342)
T ss_pred             H-----HHHHHHhcCCEEEEc---CCCCCCHHHHHHHHHHHHHcCCceeeehhhhcC
Confidence            1     2223333332 2222   232      235556666666665555544433

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.36  E-value=0.04  Score=56.93  Aligned_cols=74  Identities=19%  Similarity=0.201  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHcC--cc----cc---cccccccCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG--HA----LS---LADLENFNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~~~--~~----~~---~~~~~~~~~~~~divVn~t  452 (534)
                      +.+++.|+|+|.+|..+++.++..| ++|++++++.++++..+-++..  ..    ..   ..+.+  .+.++|+||.++
T Consensus         4 ~~~KI~IIGaG~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~--~l~~ADiVVita   81 (319)
T PTZ00117          4 KRKKISMIGAGQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE--DIKDSDVVVITA   81 (319)
T ss_pred             CCcEEEEECCCHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH--HhCCCCEEEECC
Confidence            3568999999999999999999999 4999999998776544332221  00    01   12222  346789999999


Q ss_pred             CCCCCC
Q 009464          453 SIGMQP  458 (534)
Q Consensus       453 ~~g~~~  458 (534)
                      +++..|
T Consensus        82 g~~~~~   87 (319)
T PTZ00117         82 GVQRKE   87 (319)
T ss_pred             CCCCCC
Confidence            876543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=95.36  E-value=0.0078  Score=61.50  Aligned_cols=67  Identities=21%  Similarity=0.167  Sum_probs=45.9

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccc---cccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~~~~~~~~~~divVn~t~~  454 (534)
                      +++|+|+ |.+|+.++..|.+.|++|++++|+.++...+.. .+...  .++.   ++.+ ....+|+||++++.
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~l~~-~~~~~d~vi~~a~~   74 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-LDVEIVEGDLRDPASLRK-AVAGCRALFHVAAD   74 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-CCceEEEeeCCCHHHHHH-HHhCCCEEEEecee
Confidence            6899998 999999999999999999999998766433321 11111  1222   2222 34467999998753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.35  E-value=0.072  Score=57.83  Aligned_cols=35  Identities=14%  Similarity=0.156  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      .+|+++|+|.|..|++++..|.+ |++|++++...+
T Consensus         5 ~~~~v~v~G~G~sG~a~~~~L~~-g~~v~v~D~~~~   39 (454)
T PRK01368          5 TKQKIGVFGLGKTGISVYEELQN-KYDVIVYDDLKA   39 (454)
T ss_pred             CCCEEEEEeecHHHHHHHHHHhC-CCEEEEECCCCC
Confidence            47899999999999999999994 999999986543

>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea

Probab=95.34  E-value=0.31  Score=47.83  Aligned_cols=159  Identities=17%  Similarity=0.115  Sum_probs=0.0

Q ss_pred             cCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHh
Q 009464           31 MGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL  110 (534)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~~~~~  110 (534)
                      ...+.++..+-++.+.+.|+|++=+..-++.      ...... ..+.|++..++...-=|....+.+.....++.+++.
T Consensus        16 p~~~~~d~~~~~~~~~~~g~~av~v~~~~~~------~~~~~~-~~~~~~i~~~~~~~~i~~p~~~~~~~~~~v~~a~~~   88 (235)
T cd00958          16 PNPGLEDPEETVKLAAEGGADAVALTKGIAR------AYGREY-AGDIPLIVKLNGSTSLSPKDDNDKVLVASVEDAVRL   88 (235)
T ss_pred             CCccccCHHHHHHHHHhcCCCEEEeChHHHH------hccccc-CCCCcEEEEECCCCCCCCCCCCchhhhcCHHHHHHC


Q ss_pred             CCcEEEEeccccch-------hhHHhhc-cCCCCceEEEeeec----CCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCC
Q 009464          111 GADYIDVELQVARE-------FNDSIRG-KKPEKCKVIVSSHN----YQYTPSVEDLSNLVARIQASGADIVKFATTALD  178 (534)
Q Consensus       111 ~~~~iDiEl~~~~~-------~~~~l~~-~~~~~~kiI~S~H~----f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~  178 (534)
                      |++.||+.++....       ..+++.. .++.+.++|+--|.    .....+.+++....+.+.+.|||++|+-.+.  
T Consensus        89 Ga~~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~g~~~iie~~~~g~~~~~~~~~~~i~~~~~~a~~~GaD~Ik~~~~~--  166 (235)
T cd00958          89 GADAVGVTVYVGSEEEREMLEELARVAAEAHKYGLPLIAWMYPRGPAVKNEKDPDLIAYAARIGAELGADIVKTKYTG--  166 (235)
T ss_pred             CCCEEEEEEecCCchHHHHHHHHHHHHHHHHHcCCCEEEEEeccCCcccCccCHHHHHHHHHHHHHHCCCEEEecCCC--


Q ss_pred             HHHHHHHHHHHhhccCCCCCEEEEe
Q 009464          179 ITDVARVFQITVHSQVSHVPIIGLV  203 (534)
Q Consensus       179 ~~D~~~l~~~~~~~~~~~~p~I~~~  203 (534)
                        |...+-++.+..+   .|+++++
T Consensus       167 --~~~~~~~i~~~~~---~pvv~~G  186 (235)
T cd00958         167 --DAESFKEVVEGCP---VPVVIAG  186 (235)
T ss_pred             --CHHHHHHHHhcCC---CCEEEeC

Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=95.34  E-value=0.011  Score=61.06  Aligned_cols=136  Identities=23%  Similarity=0.356  Sum_probs=90.5

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCccccccc------ccccCCCCceEEEEcCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLAD------LENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~------~~~~~~~~~divVn~t~~g~  456 (534)
                      +|+||++|+|-+++.++-.|++.+- +|+|..|+...+|++++.++.+++.++-      +.. .....|+++.-+|...
T Consensus         2 ~~~vlllgsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~-~v~~~D~viSLlP~t~   80 (445)
T KOG0172|consen    2 KKGVLLLGSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRK-EVKPLDLVISLLPYTF   80 (445)
T ss_pred             CcceEEecCccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHh-hhcccceeeeeccchh
Confidence            4789999999999999999999876 9999999999999999987755544331      112 3456799998888765


Q ss_pred             CCCCCCCCCCccccCCCCEEEEEecC-CChhHHHHHHHHCCCeEe------ccHHHHH-----------HHHHHHHHHhc
Q 009464          457 QPKVDETPIPKHALGHYALVFDAVYT-PKITRLLREAEESGATIV------SGLEMFI-----------GQAYEQYERFT  518 (534)
Q Consensus       457 ~~~~~~~~i~~~~l~~~~~v~Dv~y~-p~~T~ll~~A~~~G~~ii------~Gl~ml~-----------~Qa~~qf~lwt  518 (534)
                      +|.     +....+....-+.--.|. |+-..+-+.|...|..+.      .|++-+.           -|-+.+|.-++
T Consensus        81 h~l-----VaK~~i~~~~~~vtsSyv~pe~~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~vh~hgg~i~sf~syc  155 (445)
T KOG0172|consen   81 HPL-----VAKGCIITKEDSVTSSYVDPELEELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDLVHEHGGKIKSFKSYC  155 (445)
T ss_pred             hHH-----HHHHHHHhhcccccccccCHHHHhhhhhccCCCceEecccccCcchhhhhhhccchHHHhhcceeeehhhhc
Confidence            543     222233333334455564 333444455666675444      4665442           24477888888


Q ss_pred             C-CCCCHH
Q 009464          519 G-LPAPKE  525 (534)
Q Consensus       519 g-~~~p~~  525 (534)
                      | .++|..
T Consensus       156 Gglpape~  163 (445)
T KOG0172|consen  156 GGLPAPER  163 (445)
T ss_pred             CCccChhh
Confidence            5 466654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=95.33  E-value=0.17  Score=53.78  Aligned_cols=90  Identities=19%  Similarity=0.220  Sum_probs=56.7

Q ss_pred             eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcC-----------------chhHHHHHHHHHHCCCeEEEEeCC
Q 009464          354 NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-----------------GGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       354 NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGa-----------------GG~graia~~L~~~G~~v~i~~R~  416 (534)
                      --+..-++..+.+.+..        +.+++||+++|+|+                 |.+|.+++.+|..+|++|+++.+.
T Consensus       163 ~~~~~~i~~~v~~~~~~--------~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~  234 (390)
T TIGR00521       163 LAEPETIVKAAEREFSP--------KEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGP  234 (390)
T ss_pred             CCCHHHHHHHHHHHHhh--------ccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence            34455566665554421        13578999999998                 469999999999999999988765


Q ss_pred             HHHHHHHHHHHcCcccc---cccc----c-ccCCCCceEEEEcCCCCC
Q 009464          417 YDRARELAETVGGHALS---LADL----E-NFNPEDGMILANTTSIGM  456 (534)
Q Consensus       417 ~~~a~~la~~~~~~~~~---~~~~----~-~~~~~~~divVn~t~~g~  456 (534)
                      ....  ...  .....+   .+++    . + ..+.+|++|+|+++..
T Consensus       235 ~~~~--~~~--~~~~~~v~~~~~~~~~~~~~-~~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       235 VSLL--TPP--GVKSIKVSTAEEMLEAALNE-LAKDFDIFISAAAVAD  277 (390)
T ss_pred             CccC--CCC--CcEEEEeccHHHHHHHHHHh-hcccCCEEEEcccccc
Confidence            4321  000  001111   1122    1 1 2356899999999864

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=95.32  E-value=0.076  Score=52.52  Aligned_cols=96  Identities=21%  Similarity=0.183  Sum_probs=61.3

Q ss_pred             ccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHH-----HHHHHcCcccccccccccCCCCceEEEEcC
Q 009464          379 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARE-----LAETVGGHALSLADLENFNPEDGMILANTT  452 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~-----la~~~~~~~~~~~~~~~~~~~~~divVn~t  452 (534)
                      +.+++..++.|+|+ |-+|.++++-|+.+++.+.++.|+.++-+.     +-+.++....--.+.   .....|++|-.+
T Consensus       162 GidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~---~~~~e~i~v~vA  238 (351)
T COG5322         162 GIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDY---ALPQEDILVWVA  238 (351)
T ss_pred             CcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeeccc---cccccceEEEEe
Confidence            46888999999999 999999999999999988888877654322     223322221111111   222335554433


Q ss_pred             CCCCCCCCCCCCCCccccCCCCEEEEEecC
Q 009464          453 SIGMQPKVDETPIPKHALGHYALVFDAVYT  482 (534)
Q Consensus       453 ~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~  482 (534)
                      +..  +.   ..|.+..++++.+++|--|-
T Consensus       239 s~~--~g---~~I~pq~lkpg~~ivD~g~P  263 (351)
T COG5322         239 SMP--KG---VEIFPQHLKPGCLIVDGGYP  263 (351)
T ss_pred             ecC--CC---ceechhhccCCeEEEcCCcC
Confidence            321  11   23667788999999999873

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.29  E-value=0.014  Score=61.77  Aligned_cols=88  Identities=18%  Similarity=0.187  Sum_probs=58.1

Q ss_pred             CcEEEEEc-CchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          384 GKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       384 ~k~vlVlG-aGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      .+++.|+| .|.||.+++.+|.+.|..|++++|+...                +..+ ....+|+||-|+|.......- 
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~~----------------~~~~-~~~~aDlVilavP~~~~~~~~-  159 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDWD----------------RAED-ILADAGMVIVSVPIHLTEEVI-  159 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcch----------------hHHH-HHhcCCEEEEeCcHHHHHHHH-
Confidence            47899999 7999999999999999999999986320                1111 223579999999876321100 


Q ss_pred             CCCCccccCCCCEEEEEecCCChhHHHHHHH
Q 009464          463 TPIPKHALGHYALVFDAVYTPKITRLLREAE  493 (534)
Q Consensus       463 ~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~  493 (534)
                      ..+..  ++++.+++|+.-.  .+..+..+.
T Consensus       160 ~~l~~--l~~~~iv~Dv~Sv--K~~~~~~~~  186 (374)
T PRK11199        160 ARLPP--LPEDCILVDLTSV--KNAPLQAML  186 (374)
T ss_pred             HHHhC--CCCCcEEEECCCc--cHHHHHHHH
Confidence            01111  5677899999543  333444443

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.26  E-value=0.038  Score=56.58  Aligned_cols=70  Identities=26%  Similarity=0.418  Sum_probs=52.5

Q ss_pred             EEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCccc-----cc---ccccccCCCCceEEEEcCCCCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHAL-----SL---ADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~-----~~---~~~~~~~~~~~divVn~t~~g~  456 (534)
                      +.|+|+|++|.++++.|+..|.  ++++++++.++++..+.++..-..     ..   .+. + .+..+|++|.+++...
T Consensus         1 i~iiGaG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~-~-~l~~aDiVIitag~p~   78 (300)
T cd00300           1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDY-A-DAADADIVVITAGAPR   78 (300)
T ss_pred             CEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCH-H-HhCCCCEEEEcCCCCC
Confidence            4699999999999999999985  799999999999888877642110     11   111 2 3567899999998754


Q ss_pred             CC
Q 009464          457 QP  458 (534)
Q Consensus       457 ~~  458 (534)
                      .|
T Consensus        79 ~~   80 (300)
T cd00300          79 KP   80 (300)
T ss_pred             CC
Confidence            44

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.26  E-value=0.092  Score=56.79  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=30.7

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ...++|+|.||+|+++|..|.+.|++|+++++..
T Consensus         6 ~~~~~v~G~G~sG~s~a~~L~~~G~~v~~~D~~~   39 (448)
T PRK03803          6 DGLHIVVGLGKTGLSVVRFLARQGIPFAVMDSRE   39 (448)
T ss_pred             CCeEEEEeecHhHHHHHHHHHhCCCeEEEEeCCC
Confidence            3579999999999999999999999999999754

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=95.25  E-value=0.014  Score=58.55  Aligned_cols=67  Identities=18%  Similarity=0.158  Sum_probs=45.6

Q ss_pred             EEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCC
Q 009464          387 FVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       387 vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      +||+|+ |.+|+.++..|.+.|++|+.++|+.++...+... ......-..... ...++|+||++++..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~D~Vvh~a~~~   68 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE-GYKPWAPLAESE-ALEGADAVINLAGEP   68 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce-eeecccccchhh-hcCCCCEEEECCCCC
Confidence            589999 9999999999999999999999987754332110 000000011222 345789999999754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.25  E-value=0.017  Score=52.57  Aligned_cols=36  Identities=31%  Similarity=0.493  Sum_probs=31.0

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHHHH
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRA  420 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~~a  420 (534)
                      |+++|+|+ ||+|++++..|.+.|+ .|++..|+.+..
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~   38 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDA   38 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCC
Confidence            46899999 8999999999999998 788888876543

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed

Probab=95.24  E-value=0.59  Score=45.16  Aligned_cols=119  Identities=19%  Similarity=0.212  Sum_probs=75.0

Q ss_pred             EEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 009464           26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR  105 (534)
Q Consensus        26 icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~  105 (534)
                      ++.-+...+.+++...++.+.+.|+.++|+|.+--   +..+.++.+.+..+-++++=.     |..   -..+   -++
T Consensus        12 ~~~v~r~~~~~~~~~~~~a~~~gGi~~iEvt~~~~---~~~~~i~~l~~~~~~~~~iGa-----GTV---~~~~---~~~   77 (206)
T PRK09140         12 LIAILRGITPDEALAHVGALIEAGFRAIEIPLNSP---DPFDSIAALVKALGDRALIGA-----GTV---LSPE---QVD   77 (206)
T ss_pred             EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCCc---cHHHHHHHHHHHcCCCcEEeE-----Eec---CCHH---HHH
Confidence            44558889999999999999999999999996533   334467777666554544321     111   1122   345


Q ss_pred             HHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 009464          106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (534)
Q Consensus       106 ~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Ki  172 (534)
                      .+++.|++++=.=-. ..+..+.   .+..+..++.+-|    ||  +|    +.++.+.|+|++|+
T Consensus        78 ~a~~aGA~fivsp~~-~~~v~~~---~~~~~~~~~~G~~----t~--~E----~~~A~~~Gad~vk~  130 (206)
T PRK09140         78 RLADAGGRLIVTPNT-DPEVIRR---AVALGMVVMPGVA----TP--TE----AFAALRAGAQALKL  130 (206)
T ss_pred             HHHHcCCCEEECCCC-CHHHHHH---HHHCCCcEEcccC----CH--HH----HHHHHHcCCCEEEE
Confidence            677889998743221 1222222   2245667788766    44  23    45566789999997

>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase

Probab=95.21  E-value=0.17  Score=48.56  Aligned_cols=130  Identities=18%  Similarity=0.141  Sum_probs=84.7

Q ss_pred             EEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhC-CCcEEEEeccCCCCCCCCCCHHHHHHH
Q 009464           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERVDV  103 (534)
Q Consensus        25 ~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~~  103 (534)
                      ++||.|-..+.++++.-++.. ..|.|++|+-.-++.+.. .+.++.+++.. +.++++..... +-|       .+  .
T Consensus         1 ~l~~alD~~~~~~a~~~~~~l-~~~v~~iev~~~l~~~~g-~~~i~~l~~~~~~~~i~~d~k~~-d~~-------~~--~   68 (206)
T TIGR03128         1 KLQLALDLLDIEEALELAEKV-ADYVDIIEIGTPLIKNEG-IEAVKEMKEAFPDRKVLADLKTM-DAG-------EY--E   68 (206)
T ss_pred             CeEEEecCCCHHHHHHHHHHc-ccCeeEEEeCCHHHHHhC-HHHHHHHHHHCCCCEEEEEEeec-cch-------HH--H
Confidence            478999999999999888876 788999999655554332 34677777653 56677766543 111       11  3


Q ss_pred             HHHHHHhCCcEEEEeccccchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 009464          104 LRLAMELGADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (534)
Q Consensus       104 l~~~~~~~~~~iDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Ki  172 (534)
                      ++.+.+.|+|+|=+-...+.....++.. .++.+.++++..++.. |     ..+..+.+.+.|+|++|+
T Consensus        69 ~~~~~~~Gad~i~vh~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~-t-----~~~~~~~~~~~g~d~v~~  132 (206)
T TIGR03128        69 AEQAFAAGADIVTVLGVADDATIKGAVKAAKKHGKEVQVDLINVK-D-----KVKRAKELKELGADYIGV  132 (206)
T ss_pred             HHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHcCCEEEEEecCCC-C-----hHHHHHHHHHcCCCEEEE
Confidence            5667888999987665554322233332 2346889988766431 2     234455556779999988

at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.20  E-value=0.064  Score=57.92  Aligned_cols=72  Identities=25%  Similarity=0.265  Sum_probs=55.1

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC------cccccccccccCCCCceEEEEcCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG------HALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~------~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ...++++|+|+|..|+.++..|.+.|.+|+++++++++.+++.+.+..      +..+.+.+.+.....+|.+|.+++
T Consensus       229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~  306 (453)
T PRK09496        229 KPVKRVMIVGGGNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN  306 (453)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence            456899999999999999999999999999999999998888776421      112222333334567899987765

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=95.19  E-value=0.032  Score=58.20  Aligned_cols=36  Identities=22%  Similarity=0.178  Sum_probs=32.6

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +++|+++|+|+ |-+|+.++..|.+.|.+|++++|..
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~   49 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS   49 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            56789999999 9999999999999999999998854

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=95.17  E-value=0.032  Score=56.58  Aligned_cols=70  Identities=19%  Similarity=0.337  Sum_probs=44.1

Q ss_pred             EEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHc----Ccccc------ccccc------c-cCCCCceE
Q 009464          387 FVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG----GHALS------LADLE------N-FNPEDGMI  447 (534)
Q Consensus       387 vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~----~~~~~------~~~~~------~-~~~~~~di  447 (534)
                      |||+|| |-+|..++..|.+.+. +|++++|++.+.-++..++.    .....      +.|+.      . +...++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            689999 7889999999999998 89999999999988888773    11110      11221      1 12237999


Q ss_pred             EEEcCCCCC
Q 009464          448 LANTTSIGM  456 (534)
Q Consensus       448 vVn~t~~g~  456 (534)
                      |++++..=.
T Consensus        81 VfHaAA~Kh   89 (293)
T PF02719_consen   81 VFHAAALKH   89 (293)
T ss_dssp             EEE------
T ss_pred             EEEChhcCC
Confidence            999987543

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02858 fructose-bisphosphate aldolase

Probab=95.16  E-value=0.04  Score=67.28  Aligned_cols=112  Identities=18%  Similarity=0.081  Sum_probs=72.7

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  463 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~  463 (534)
                      .+++-++|.|-||.+++..|.+.|++|+++||+.++++.+.+.. ...  .++..+ ....+|+|+-+.+-...  ....
T Consensus       324 ~~~IGfIGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G-a~~--~~s~~e-~~~~aDvVi~~V~~~~~--v~~V  397 (1378)
T PLN02858        324 VKRIGFIGLGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAG-GLA--GNSPAE-VAKDVDVLVIMVANEVQ--AENV  397 (1378)
T ss_pred             CCeEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-Cee--cCCHHH-HHhcCCEEEEecCChHH--HHHH
Confidence            37899999999999999999999999999999999998886542 111  112222 23457999987763210  0000


Q ss_pred             CCC----ccccCCCCEEEEEecC-CChh-HHHHHHHH--CCCeEec
Q 009464          464 PIP----KHALGHYALVFDAVYT-PKIT-RLLREAEE--SGATIVS  501 (534)
Q Consensus       464 ~i~----~~~l~~~~~v~Dv~y~-p~~T-~ll~~A~~--~G~~ii~  501 (534)
                      .+.    ...+.++.+++|+... |..+ .+.+.+++  +|+.+++
T Consensus       398 l~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lD  443 (1378)
T PLN02858        398 LFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVD  443 (1378)
T ss_pred             HhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEE
Confidence            001    1224567899999875 4433 45555666  6765444

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.14  E-value=0.038  Score=53.53  Aligned_cols=69  Identities=30%  Similarity=0.417  Sum_probs=45.9

Q ss_pred             EEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHc---Ccc----ccccc---cccc------CCCCceEE
Q 009464          387 FVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHA----LSLAD---LENF------NPEDGMIL  448 (534)
Q Consensus       387 vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~~div  448 (534)
                      ++|+|+ |++|+.++..|.+.|++|+++.|+. ++.+++.+.+.   .+.    .++.+   +.++      .....|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            579998 8999999999999999999988874 45555544432   111    12211   1110      12467999


Q ss_pred             EEcCCCC
Q 009464          449 ANTTSIG  455 (534)
Q Consensus       449 Vn~t~~g  455 (534)
                      |++++..
T Consensus        81 i~~ag~~   87 (239)
T TIGR01830        81 VNNAGIT   87 (239)
T ss_pred             EECCCCC
Confidence            9998864

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.14  E-value=0.026  Score=54.26  Aligned_cols=36  Identities=19%  Similarity=0.404  Sum_probs=33.4

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      .++.++|+|+|+||+|..++..|++.|+ +|++++++
T Consensus        18 ~L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4667899999999999999999999999 89999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.13  E-value=0.054  Score=55.06  Aligned_cols=73  Identities=27%  Similarity=0.366  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcccc-------ccccc----c-cCCCCceEEE
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALS-------LADLE----N-FNPEDGMILA  449 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~-------~~~~~----~-~~~~~~divV  449 (534)
                      .|.++||+|||.+|..+...+...|+ +|++++-.+.|. ++|++++.+...       .+++.    . ..-..+|..+
T Consensus       169 ~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rl-e~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~  247 (354)
T KOG0024|consen  169 KGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRL-ELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTF  247 (354)
T ss_pred             cCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHH-HHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEE
Confidence            47899999999999999999999999 999999998887 556668864321       11111    1 0113489999


Q ss_pred             EcCCCCC
Q 009464          450 NTTSIGM  456 (534)
Q Consensus       450 n~t~~g~  456 (534)
                      +|+++.+
T Consensus       248 dCsG~~~  254 (354)
T KOG0024|consen  248 DCSGAEV  254 (354)
T ss_pred             EccCchH
Confidence            9998754

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=95.12  E-value=0.042  Score=55.99  Aligned_cols=39  Identities=31%  Similarity=0.404  Sum_probs=35.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  425 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~  425 (534)
                      +++|+|+|.+|..++..|++.|.+|++++| .++.+++.+
T Consensus         2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~   40 (305)
T PRK12921          2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE   40 (305)
T ss_pred             eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh
Confidence            589999999999999999999999999999 777777654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=95.12  E-value=0.017  Score=56.24  Aligned_cols=69  Identities=25%  Similarity=0.260  Sum_probs=43.0

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHH-HHcCccccccc------ccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKG--ARVVIANRTYDRARELAE-TVGGHALSLAD------LENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G--~~v~i~~R~~~~a~~la~-~~~~~~~~~~~------~~~~~~~~~divVn~t~~  454 (534)
                      ++++|+|+ ||+|++++..|++.|  +.|.+..|+....  ... .+.....++.+      +.+ ..+..|+|||+++.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~-~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSE-QFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHH-hcCCCCEEEECCcc
Confidence            47999999 899999999999986  4666667754321  100 00000112211      112 34678999999987


Q ss_pred             CC
Q 009464          455 GM  456 (534)
Q Consensus       455 g~  456 (534)
                      ..
T Consensus        78 ~~   79 (235)
T PRK09009         78 LH   79 (235)
T ss_pred             cc
Confidence            53

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.11  E-value=0.037  Score=60.24  Aligned_cols=79  Identities=16%  Similarity=0.211  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc---------cccccc---cc-cCCCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA---------LSLADL---EN-FNPED  444 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~---------~~~~~~---~~-~~~~~  444 (534)
                      ..+.||+++|+|| |.+|..++..+++.+. +|++++|++-+...+..++....         .+..|.   .. +.-.+
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k  325 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK  325 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence            3468999999999 6789999999999998 89999999988877777765321         122221   11 01234


Q ss_pred             ceEEEEcCCCCCCC
Q 009464          445 GMILANTTSIGMQP  458 (534)
Q Consensus       445 ~divVn~t~~g~~~  458 (534)
                      +|+|++++..=..|
T Consensus       326 vd~VfHAAA~KHVP  339 (588)
T COG1086         326 VDIVFHAAALKHVP  339 (588)
T ss_pred             CceEEEhhhhccCc
Confidence            89999998754444

>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain

Probab=95.09  E-value=0.48  Score=48.25  Aligned_cols=84  Identities=26%  Similarity=0.370  Sum_probs=59.3

Q ss_pred             EEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEec----------CCCCCCh-hhHHHHHhhhCCCcEEEEeccCCCCCCC
Q 009464           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLD----------GLKNFNP-RENIKTLIKESPVPTLFTYRPIWEGGQY   93 (534)
Q Consensus        25 ~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD----------~l~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~   93 (534)
                      .+.+.|.+.+.++...-++.+.+.|+|.||+=+-          +..+.+. .+.++.+++..++|+.+-++..      
T Consensus        91 p~ivsi~g~~~~~~~~~a~~~~~~G~d~iElN~~cP~~~~~g~~~~~~~~~~~eiv~~vr~~~~~Pv~vKl~~~------  164 (296)
T cd04740          91 PVIASIAGSTVEEFVEVAEKLADAGADAIELNISCPNVKGGGMAFGTDPEAVAEIVKAVKKATDVPVIVKLTPN------  164 (296)
T ss_pred             cEEEEEecCCHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCcccccCCHHHHHHHHHHHHhccCCCEEEEeCCC------
Confidence            3678999999999988888887889999999542          2221111 2335556555689999887631      


Q ss_pred             CCCHHHHHHHHHHHHHhCCcEEEE
Q 009464           94 DGDENERVDVLRLAMELGADYIDV  117 (534)
Q Consensus        94 ~~~~~~~~~~l~~~~~~~~~~iDi  117 (534)
                         .++-.++.+.+.+.|+|+|++
T Consensus       165 ---~~~~~~~a~~~~~~G~d~i~~  185 (296)
T cd04740         165 ---VTDIVEIARAAEEAGADGLTL  185 (296)
T ss_pred             ---chhHHHHHHHHHHcCCCEEEE
Confidence               224567777888889999886

DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.

>PRK09414 glutamate dehydrogenase; Provisional

Probab=95.09  E-value=0.25  Score=53.15  Aligned_cols=133  Identities=20%  Similarity=0.185  Sum_probs=79.2

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEE-e----------CCHHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA-N----------RTYDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~-~----------R~~~~a~~la~  425 (534)
                      +.|...+++..++..       +.+++|++++|.|.|.+|+.+|..|.+.|++|+.+ +          -+.+.+.+..+
T Consensus       212 g~Gv~~~~~~~~~~~-------~~~l~g~rVaIqGfGnVG~~~A~~L~~~GakVVavsDs~G~iyn~~GLD~~~L~~~k~  284 (445)
T PRK09414        212 GYGLVYFAEEMLKAR-------GDSFEGKRVVVSGSGNVAIYAIEKAQQLGAKVVTCSDSSGYVYDEEGIDLEKLKEIKE  284 (445)
T ss_pred             cHHHHHHHHHHHHhc-------CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHH
Confidence            567777776655431       35689999999999999999999999999987766 5          35565544433


Q ss_pred             HHcCccccc--------ccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccC--CCCEEEEEecCCChhHHHHHHHHC
Q 009464          426 TVGGHALSL--------ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG--HYALVFDAVYTPKITRLLREAEES  495 (534)
Q Consensus       426 ~~~~~~~~~--------~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~--~~~~v~Dv~y~p~~T~ll~~A~~~  495 (534)
                      .-......+        .+..++....+||+|-|+.-+.-   +..+  ...+.  ...+|+...-+|.....-+.-.++
T Consensus       285 ~~~~~l~~~~~~~~~~~i~~~~i~~~d~DVliPaAl~n~I---t~~~--a~~i~~~~akiIvEgAN~p~t~~A~~~L~~r  359 (445)
T PRK09414        285 VRRGRISEYAEEFGAEYLEGGSPWSVPCDIALPCATQNEL---DEED--AKTLIANGVKAVAEGANMPSTPEAIEVFLEA  359 (445)
T ss_pred             hcCCchhhhhhhcCCeecCCccccccCCcEEEecCCcCcC---CHHH--HHHHHHcCCeEEEcCCCCCCCHHHHHHHHHC
Confidence            221111011        11111122368999998853321   1111  11221  346888888788733333344667


Q ss_pred             CCeEec
Q 009464          496 GATIVS  501 (534)
Q Consensus       496 G~~ii~  501 (534)
                      |+.+++
T Consensus       360 GI~~vP  365 (445)
T PRK09414        360 GVLFAP  365 (445)
T ss_pred             CcEEEC
Confidence            765554

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=95.09  E-value=0.021  Score=59.28  Aligned_cols=71  Identities=17%  Similarity=0.174  Sum_probs=46.5

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHcCcc--cccc-c---ccccCCCCceEEEEcCCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA--LSLA-D---LENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~-G~~v~i~~R~~~~a~~la~~~~~~~--~~~~-~---~~~~~~~~~divVn~t~~g~  456 (534)
                      ++++|+|+ |-+|+.++..|.+. |.+|+.++|+.++...+...-..+.  .++. +   +.+ ...++|+||+++....
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~d~ViH~aa~~~   80 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEY-HVKKCDVILPLVAIAT   80 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHH-HHcCCCEEEECcccCC
Confidence            47999999 99999999999986 5799999998765443322101111  1221 1   112 2346899999887543

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.09  E-value=0.044  Score=47.51  Aligned_cols=105  Identities=24%  Similarity=0.289  Sum_probs=67.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHCC--CeE-EEEeCCHHHHHHHHHHHcCcc-cccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKG--ARV-VIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G--~~v-~i~~R~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      ++.|+|+|.+|+....++.+..  .++ .+++++.++++++++.++... .+++++-+  ...+|+|+-+||...+.   
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~~D~V~I~tp~~~h~---   76 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIPVYTDLEELLA--DEDVDAVIIATPPSSHA---   76 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSEEESSHHHHHH--HTTESEEEEESSGGGHH---
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhcccchhHHHHHHH--hhcCCEEEEecCCcchH---
Confidence            5899999999999998888873  354 589999999999998887542 22333222  13689999998754321   


Q ss_pred             CCCCCccccCCC-CEEEEEecCCC------hhHHHHHHHHCCCeEe
Q 009464          462 ETPIPKHALGHY-ALVFDAVYTPK------ITRLLREAEESGATIV  500 (534)
Q Consensus       462 ~~~i~~~~l~~~-~~v~Dv~y~p~------~T~ll~~A~~~G~~ii  500 (534)
                        ++-...++.+ .+++|   +|.      ...+++.+++.|..+.
T Consensus        77 --~~~~~~l~~g~~v~~E---KP~~~~~~~~~~l~~~a~~~~~~~~  117 (120)
T PF01408_consen   77 --EIAKKALEAGKHVLVE---KPLALTLEEAEELVEAAKEKGVKVM  117 (120)
T ss_dssp             --HHHHHHHHTTSEEEEE---SSSSSSHHHHHHHHHHHHHHTSCEE
T ss_pred             --HHHHHHHHcCCEEEEE---cCCcCCHHHHHHHHHHHHHhCCEEE
Confidence              1112233222 34433   333      3466777777786653

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.04  E-value=0.048  Score=49.43  Aligned_cols=38  Identities=29%  Similarity=0.469  Sum_probs=34.4

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  425 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~  425 (534)
                      ++|+|+|++|.-.|+.|++.|++|+++.|.. +++.+.+
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~   38 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKE   38 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHH
T ss_pred             CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhh
Confidence            6899999999999999999999999999998 7777654

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.02  E-value=0.062  Score=55.22  Aligned_cols=72  Identities=28%  Similarity=0.298  Sum_probs=53.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCc-c------ccc--ccccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH-A------LSL--ADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~-~------~~~--~~~~~~~~~~~divVn~t~~  454 (534)
                      ++.|+|+|.+|.++|+.|...|.  ++++++.+.++++..+.++... .      ...  .+.+  ....+|+||-+++.
T Consensus         1 Ki~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~--~~~~aDivvitaG~   78 (307)
T cd05290           1 KLVVIGAGHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYD--DCADADIIVITAGP   78 (307)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHH--HhCCCCEEEECCCC
Confidence            47899999999999999998886  7999999988887777666421 0      011  1111  35678999999988


Q ss_pred             CCCCC
Q 009464          455 GMQPK  459 (534)
Q Consensus       455 g~~~~  459 (534)
                      ...|.
T Consensus        79 ~~kpg   83 (307)
T cd05290          79 SIDPG   83 (307)
T ss_pred             CCCCC
Confidence            65553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.02  E-value=0.062  Score=52.44  Aligned_cols=48  Identities=21%  Similarity=0.175  Sum_probs=38.1

Q ss_pred             CcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHH
Q 009464          377 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELA  424 (534)
Q Consensus       377 ~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~-~a~~la  424 (534)
                      +....+++++|||+|+|.+|..=+..|.+.|++|+|++-... ..++++
T Consensus        18 pi~l~~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~   66 (223)
T PRK05562         18 FISLLSNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK   66 (223)
T ss_pred             eeEEECCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH
Confidence            344567799999999999998888999999999999986542 344444

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.00  E-value=0.15  Score=55.96  Aligned_cols=36  Identities=33%  Similarity=0.533  Sum_probs=32.5

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +.+++++|+|.|++|+++|..|.++|++|++++...
T Consensus         5 ~~~~~i~v~G~G~sG~s~a~~L~~~G~~v~~~D~~~   40 (498)
T PRK02006          5 LQGPMVLVLGLGESGLAMARWCARHGARLRVADTRE   40 (498)
T ss_pred             cCCCEEEEEeecHhHHHHHHHHHHCCCEEEEEcCCC
Confidence            567899999999999999999999999999998643

>COG0281 SfcA Malic enzyme [Energy production and conversion]

Probab=95.00  E-value=0.3  Score=51.48  Aligned_cols=104  Identities=22%  Similarity=0.294  Sum_probs=68.0

Q ss_pred             cCCCeEEEecccc---cHHHHHHHhcCCCCCEEEec---cchHHHHhhcccccCHHHHHhcCeeEEEEeccCCeEEEEec
Q 009464          282 VGFNGVFVHLLVD---DIAKFFQTYSSNDFAGFSCT---IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT  355 (534)
Q Consensus       282 ~gl~~~y~~~~~~---~~~~~~~~~~~~~~~G~~VT---~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~~~g~l~G~NT  355 (534)
                      -|+|..=+.+++.   ++.++++.+ .+.|.|+|+-   .|.+..+-..+.+..                   .+-=||=
T Consensus       114 aGid~~pI~ld~~~~~ei~~~Vkal-~p~FgginLedi~ap~cf~ie~~lr~~~-------------------~IPvFhD  173 (432)
T COG0281         114 AGIDVLPIELDVGTNNEIIEFVKAL-EPTFGGINLEDIDAPRCFAIEERLRYRM-------------------NIPVFHD  173 (432)
T ss_pred             cCCCceeeEeeCCChHHHHHHHHHh-hhcCCCcceeecccchhhHHHHHHhhcC-------------------CCCcccc
Confidence            4688655566664   455565555 4679999864   455555544443221                   1233333


Q ss_pred             c--H------HHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC---eEEEEeCC
Q 009464          356 D--Y------VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA---RVVIANRT  416 (534)
Q Consensus       356 D--~------~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~---~v~i~~R~  416 (534)
                      |  +      .|++++|+-           .+.+++..++++.|||.+|-+++..|...|+   +|++++|.
T Consensus       174 DqqGTaiv~lA~llnalk~-----------~gk~l~d~kiv~~GAGAAgiaia~~l~~~g~~~~~i~~~D~~  234 (432)
T COG0281         174 DQQGTAIVTLAALLNALKL-----------TGKKLKDQKIVINGAGAAGIAIADLLVAAGVKEENIFVVDRK  234 (432)
T ss_pred             cccHHHHHHHHHHHHHHHH-----------hCCCccceEEEEeCCcHHHHHHHHHHHHhCCCcccEEEEecC
Confidence            3  2      234444331           2457888999999999999999999999998   69999874

>PLN02206 UDP-glucuronate decarboxylase

Probab=94.97  E-value=0.048  Score=58.96  Aligned_cols=74  Identities=16%  Similarity=0.176  Sum_probs=47.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHcC---cccccccccccCCCCceEEEEcCCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGG---HALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~~---~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ..++++|+|+|+ |-+|+.++..|.+.|.+|++++|... +.+.+...+..   +....+-+.. ...++|.||++++..
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-~l~~~D~ViHlAa~~  194 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-ILLEVDQIYHLACPA  194 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-hhcCCCEEEEeeeec
Confidence            345789999998 99999999999999999998876532 12222222211   1111111222 334689999998643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	534
2gpt_A	523	Crystal Structure Of Arabidopsis Dehydroquinate Deh		0.0
2o7q_A	523	Crystal Structure Of The A. Thaliana Dhq-Dehydroshi		0.0
1nvt_A	287	Crystal Structure Of Shikimate Dehydrogenase (Aroe		3e-31
2egg_A	297	Crystal Structure Of Shikimate 5-Dehydrogenase (Aro		3e-31
3don_A	277	Crystal Structure Of Shikimate Dehydrogenase From S		9e-30
2hk7_A	269	Crystal Structure Of Shikimate Dehydrogenase From A		2e-24
2hk9_A	275	Crystal Structure Of Shikimate Dehydrogenase From A		2e-24
1wxd_A	263	Crystal Structure Of Shikimate 5-dehydrogenase (aro		2e-23
3toz_A	315	2.2 Angstrom Crystal Structure Of Shikimate 5-Dehyd		2e-21
3js3_A	258	Crystal Structure Of Type I 3-Dehydroquinate Dehydr		4e-21
3t4e_A	312	1.95 Angstrom Crystal Structure Of Shikimate 5-Dehy		1e-20
3m7w_A	255	Crystal Structure Of Type I 3-Dehydroquinate Dehydr		2e-19
3l2i_A	276	1.85 Angstrom Crystal Structure Of The 3-Dehydroqui		2e-19
3fbt_A	282	Crystal Structure Of A Chorismate MutaseSHIKIMATE 5		4e-19
4guf_A	276	1.5 Angstrom Crystal Structure Of The Salmonella En		1e-18
3o1n_A	276	1.03 Angstrom Crystal Structure Of Q236a Mutant Typ		1e-18
3nnt_A	276	Crystal Structure Of K170m Mutant Of Type I 3-Dehyd		1e-18
1qfe_A	252	The Structure Of Type I 3-Dehydroquinate Dehydratas		2e-18
1npd_A	288	X-Ray Structure Of Shikimate Dehydrogenase Complexe		2e-18
1vi2_A	300	Crystal Structure Of Shikimate-5-Dehydrogenase With		3e-18
3u62_A	253	Crystal Structure Of Shikimate Dehydrogenase From T		1e-17
1nyt_A	271	Shikimate Dehydrogenase Aroe Complexed With Nadp+ L		8e-16
3pwz_A	272	Crystal Structure Of An Ael1 Enzyme From Pseudomona		3e-14
2ox1_A	196	Archaeal Dehydroquinase Length = 196		3e-14
2yr1_A	257	Crystal Structure Of 3-Dehydroquinate Dehydratase F		7e-14
3phg_A	269	Crystal Structure Of The Shikimate 5-Dehydrogenase		8e-14
1sfl_A	238	1.9a Crystal Structure Of Staphylococcus Aureus Typ		1e-13
4fsh_A	271	Crystal Structure Of Shikimate Dehydrogenase (aroe)		2e-13
1sfj_A	238	2.4a Crystal Structure Of Staphylococcus Aureus Typ		2e-13
4foo_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		2e-13
3tum_B	269	2.15 Angstrom Resolution Crystal Structure Of A Shi		3e-13
4fpx_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		3e-13
4fr5_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		4e-13
4fos_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		5e-13
4fq8_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		5e-13
1npy_A	271	Structure Of Shikimate 5-Dehydrogenase-Like Protein		6e-13
3o8q_A	281	1.45 Angstrom Resolution Crystal Structure Of Shiki		3e-12
3pgj_A	302	2.49 Angstrom Resolution Crystal Structure Of Shiki		4e-12
3o8q_B	275	1.45 Angstrom Resolution Crystal Structure Of Shiki		4e-12
2egz_A	219	Crystal Structure Of The 3-Dehydroquinate Dehydrata		1e-10
3jyo_A	283	Quinate Dehydrogenase From Corynebacterium Glutamic		8e-10
2nlo_A	302	Crystal Structure Of The Quinate Dehydrogenase From		8e-10
3l9c_A	259	The Crystal Structure Of Smu.777 From Streptococcus		2e-09
1p74_A	272	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		4e-08
2ocz_A	231	The Structure Of A Putative 3-dehydroquinate Dehydr		1e-05

>pdb|2GPT|A Chain A, Crystal Structure Of Arabidopsis Dehydroquinate Dehydratase- Shikimate Dehydrogenase In Complex With Tartrate And Shikimate Length = 523

Iteration: 1
 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/516 (72%), Positives = 430/516 (83%), Gaps = 5/516 (0%)
Query: 21  KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
           KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRLD LK+FNP E++KT+IK+SP+PT
Sbjct: 2   KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           LFTYRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF  SI GKKP K KVI
Sbjct: 62  LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPII 200
           VSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+DI DVAR+F IT  +QV   P I
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQV---PTI 178
Query: 201 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 260
           GLVMGERGL+SRILC+KFGG+LTFGTL++  VSAPGQPTIKDLLDLYNFR++GPDTKV+G
Sbjct: 179 GLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYG 238
Query: 261 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 320
           IIGKPV HSKSPI++N+AFKSV FNGV+VHLLVD++  F Q YSS+DFAGFSCTIPHKEA
Sbjct: 239 IIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEA 298
Query: 321 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLNVSGGV 378
           A++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR  G  +     
Sbjct: 299 ALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSS 358
Query: 379 SSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALSLADLE 438
           SS LA K  VVI                  +VVIANRTY+RA ELAE +GG ALSL DL+
Sbjct: 359 SSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLD 418
Query: 439 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 498
           N++PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA 
Sbjct: 419 NYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAI 478
Query: 499 IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
            VSG EMF+ QAYEQ+E FTGLPAPKEL+ +IM+KY
Sbjct: 479 TVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIMSKY 514

>pdb|2O7Q|A Chain A, Crystal Structure Of The A. Thaliana Dhq-Dehydroshikimate-Sdh- Shikimate-Nadp(H) Length = 523

Iteration: 1
 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/516 (72%), Positives = 429/516 (83%), Gaps = 5/516 (0%)
Query: 21  KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
           KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRLD LK+FNP E++KT+IK+SP+PT
Sbjct: 2   KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           LFTYRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF  SI GKKP K KVI
Sbjct: 62  LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPII 200
           VSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+DI DVAR+F IT  +QV   P I
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQV---PTI 178
Query: 201 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 260
           GLVMGERGL+SRILC+KFGG+LTFGTL++  VSAPGQPTIKDLLDLYNFR++GPDTKV+G
Sbjct: 179 GLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYG 238
Query: 261 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 320
           IIGKPV HSKSPI++N+AFKSV FNGV+VHLLVD++  F Q YSS+DFAGFSCTIPHKEA
Sbjct: 239 IIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEA 298
Query: 321 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLNVSGGV 378
           A++ CDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR  G  +     
Sbjct: 299 ALQXCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDXIGSISAIEDGLRSSGDPSSVPSS 358
Query: 379 SSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALSLADLE 438
           SS LA K  VVI                  +VVIANRTY+RA ELAE +GG ALSL DL+
Sbjct: 359 SSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLD 418
Query: 439 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 498
           N++PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA 
Sbjct: 419 NYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAI 478
Query: 499 IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
            VSG EMF+ QAYEQ+E FTGLPAPKEL+ +IM+KY
Sbjct: 479 TVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIMSKY 514

>pdb|1NVT|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or Mj1084) In Complex With Nadp+ Length = 287

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 143/284 (50%), Gaps = 27/284 (9%)
Query: 256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 313
           TKV G+IG PV HS SPI++N AFK  G N V+V   +L +++        +    GF+ 
Sbjct: 11  TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNV 70
Query: 314 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 373
           TIPHK   +K  DE+D  A+ IGAVN I  +  DGK  GYNTD +GA  A+E+ + GR+ 
Sbjct: 71  TIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEI-GRVK 127
Query: 374 VSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVG----- 428
                         +VI                   ++IANRT ++A  LA+ +      
Sbjct: 128 DKN-----------IVIYGAGGAARAVAFELAKDNNIIIANRTVEKAEALAKEIAEKLNK 176
Query: 429 --GHALSLADLENFNPEDGM-ILANTTSIGMQPKVDETPIPK-HALGHYALVFDAVYTPK 484
             G  +  + L+     DG+ I+ N T IGM P +D  PI K   L    +V D +Y P 
Sbjct: 177 KFGEEVKFSGLD--VDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPL 234
Query: 485 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQ 528
            T LL+EA++  A  ++GL M I Q    ++ +TG+    E+ +
Sbjct: 235 ETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMK 278

>pdb|2EGG|A Chain A, Crystal Structure Of Shikimate 5-Dehydrogenase (Aroe) From Geobacillus Kaustophilus Length = 297

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 142/278 (51%), Gaps = 19/278 (6%)
Query: 248 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSS 305
           N    G   KV+G+IG PV HS SP+++N+AF  +G    +    V+   +        +
Sbjct: 15  NLYFQGHMEKVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRA 74
Query: 306 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 365
              AG + TIPHK A +   DEVD  A+ IGAVN II   +DG+L GYNTD +G + A+E
Sbjct: 75  LGIAGVNVTIPHKLAVIPFLDEVDEHARRIGAVNTII--NNDGRLVGYNTDGLGYVQALE 132
Query: 366 DGLRGRLNVSGGVSSALAGK-LFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRAREL- 423
           +     +N++      L GK + V+                   R+ +ANRT ++A  L 
Sbjct: 133 E----EMNIT------LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLV 182
Query: 424 --AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 481
              +       SLA+ E    E  +I+ NTTS+GM P+V+  P+    L    +V D +Y
Sbjct: 183 REGDERRSAYFSLAEAETRLAEYDIII-NTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY 241
Query: 482 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 519
            P  T+ L+EA+  GA + +G+ M + Q    +E++TG
Sbjct: 242 NPLETKWLKEAKARGARVQNGVGMLVYQGALAFEKWTG 279

>pdb|3DON|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Staphylococcus Epidermidis Length = 277

Iteration: 1
 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 136/272 (50%), Gaps = 34/272 (12%)
Query: 259 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 316
           F +IG P+ HS SP++++  F+S+     +  +++ V+      +  S     GF+ TIP
Sbjct: 3   FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 317 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTD---YVGAISAIEDGLRGRLN 373
           HKE  +   D+++  AKS+GAVN ++ +  DGK  GYNTD   YV  +  I +G+     
Sbjct: 63  HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEGIEDAYI 120
Query: 374 V---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 430
           +   +GG S  +A +L+ ++                   + +ANRT  R    +  +   
Sbjct: 121 LILGAGGASKGIANELYKIVRPT----------------LTVANRTMSRFNNWSLNINKI 164
Query: 431 ALSLAD--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 488
            LS A+  L+ F+     I+ NTT  GM    D   I  + L  + LV D VY P  T +
Sbjct: 165 NLSHAESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPI 218
Query: 489 LREAEESGATIVSGLEMFIGQAYEQYERFTGL 520
           L EAE+ G  I +GL+MF+ Q  E ++ +T L
Sbjct: 219 LIEAEQRGNPIYNGLDMFVHQGAESFKIWTNL 250

>pdb|2HK7|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex Aeolicus In Complex With Mercury At 2.5 Angstrom Resolution Length = 269

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 140/284 (49%), Gaps = 41/284 (14%)
Query: 252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 309
           +   T+++G+IG PV HS SP+  N   +  G N V++   +  +++ K F+ + +    
Sbjct: 2   INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 369
           G + T+P KE  +   D V+  AK IGAVN +  +  +GK +GYNTD++G + +++    
Sbjct: 62  GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLK---- 115
Query: 370 GRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGG 429
                   +   +  K  +V+                  +V + NRT ++A +LA+    
Sbjct: 116 -------SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL 168
Query: 430 HALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYAL------VFDA 479
             ++       +PE+ +    ++ NTTS+G++   DE P     + +Y L      V D 
Sbjct: 169 EVVN-------SPEEVIDKVQVIVNTTSVGLK---DEDP----EIFNYDLIKKDHVVVDI 214
Query: 480 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP 523
           +Y  K T+LL++A+E GA ++ GL M + Q  E ++ + G   P
Sbjct: 215 IY--KETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVP 256

>pdb|2HK9|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex Aeolicus In Complex With Shikimate And Nadp+ At 2.2 Angstrom Resolution Length = 275

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 140/284 (49%), Gaps = 41/284 (14%)
Query: 252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 309
           +   T+++G+IG PV HS SP+  N   +  G N V++   +  +++ K F+ + +    
Sbjct: 8   INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 67
Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 369
           G + T+P KE  +   D V+  AK IGAVN +  +  +GK +GYNTD++G + +++    
Sbjct: 68  GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLK---- 121
Query: 370 GRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGG 429
                   +   +  K  +V+                  +V + NRT ++A +LA+    
Sbjct: 122 -------SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL 174
Query: 430 HALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYAL------VFDA 479
             ++       +PE+ +    ++ NTTS+G++   DE P     + +Y L      V D 
Sbjct: 175 EVVN-------SPEEVIDKVQVIVNTTSVGLK---DEDP----EIFNYDLIKKDHVVVDI 220
Query: 480 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP 523
           +Y  K T+LL++A+E GA ++ GL M + Q  E ++ + G   P
Sbjct: 221 IY--KETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVP 262

>pdb|1WXD|A Chain A, Crystal Structure Of Shikimate 5-dehydrogenase (aroe) From Thermus Thermophilus Hb8 Length = 263

Iteration: 1
 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 31/268 (11%)
Query: 259 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF------VHLLVDDIAKFFQTYSSNDFAGFS 312
           F ++G PV HS SP ++  A +S+G  G +      +  L   + +  +      F G +
Sbjct: 4   FAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-----FRGVN 58
Query: 313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 372
            T+P KEAA+   D V   A+ IGAVN ++  Q +G+LFG+NTD  G + A++       
Sbjct: 59  LTLPLKEAALAHLDWVSPEAQRIGAVNTVL--QVEGRLFGFNTDAPGFLEALK------- 109
Query: 373 NVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHAL 432
             +GG+   L G   +V+                   V + NRT  RA  LAE  G  A+
Sbjct: 110 --AGGIP--LKGPA-LVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAV 164
Query: 433 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 492
            L         +  +L N T +G++     +P+P           D VY P  TR LREA
Sbjct: 165 PLE-----KAREARLLVNATRVGLE-DPSASPLPAELFPEEGAAVDLVYRPLWTRFLREA 218
Query: 493 EESGATIVSGLEMFIGQAYEQYERFTGL 520
           +  G  + +GL M   Q    +  +TGL
Sbjct: 219 KAKGLKVQTGLPMLAWQGALAFRLWTGL 246

>pdb|3TOZ|A Chain A, 2.2 Angstrom Crystal Structure Of Shikimate 5-Dehydrogenase From Listeria Monocytogenes In Complex With Nad. Length = 315

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 38/296 (12%)
Query: 256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 313
           T++ G+I  P+ HS SP ++NEAF  +G + V++   V D  +    Q + + +  G++ 
Sbjct: 37  TELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNV 96
Query: 314 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED------G 367
           ++P+K    K  D++   A+ +GAVN ++    DG L G+ TD  G + A+++      G
Sbjct: 97  SMPNKTNIHKYLDKLSPAAELVGAVNTVV--NDDGVLTGHITDGTGYMRALKEAGHDIIG 154
Query: 368 LRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRT---YDRARELA 424
            +  +  +GG ++A+                           + I NR    Y  A +  
Sbjct: 155 KKMTICGAGGAATAIC----------------IQAALDGVKEISIFNRKDDFYANAEKTV 198
Query: 425 ETVG------GHALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPK-HALGHYAL 475
           E +            + D E    E  + +I  N T +GM+P   ET +P    L    +
Sbjct: 199 EKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELI 258
Query: 476 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 531
           V D VY P  TRLL  AEE G   ++GL M + Q  + +E +T    P +  ++I+
Sbjct: 259 VSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL 314

>pdb|3JS3|A Chain A, Crystal Structure Of Type I 3-Dehydroquinate Dehydratase (Arod) From Clostridium Difficile With Covalent Reaction Intermediate Length = 258

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 11/233 (4%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPVPT 80
           ICVPI+G++   ++ +  +   +  D++E R+D  +N    + +K ++ E       +P 
Sbjct: 22  ICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPL 81
Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRGKKPEK-CK 138
           LFT+R + EGG+     +    + +     G  D IDVEL +  E  D +     +K  K
Sbjct: 82  LFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVK 141
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT--VHSQVSH 196
           VI+S+H++  TP  E++ + + R+Q  GAD+ K A    +  DV  + + T  +    + 
Sbjct: 142 VIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYAD 201
Query: 197 VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 249
            PII + M   G+ISR+    FG  LTFG  ++  VSAPGQ + K+L  + N 
Sbjct: 202 RPIITMSMSGMGVISRLCGEIFGSALTFGAAKS--VSAPGQISFKELNSVLNL 252

>pdb|3T4E|A Chain A, 1.95 Angstrom Crystal Structure Of Shikimate 5-Dehydrogenase (Aroe) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium In Complex With Nad Length = 312

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 30/291 (10%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           ++ G++  P+ HS SP + N+A +  G    ++   VD+   A   +   +    G   +
Sbjct: 32  ELIGLMAYPIRHSLSPEMQNKALEKAGLPYTYMAFEVDNTTFASAIEGLKALKMRGTGVS 91
Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-EDGLRGRLN 373
           +P+K+ A +  DE+   AK +GA+N I+    DG L GYNTD  G I AI E G   R  
Sbjct: 92  MPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDMR-- 147
Query: 374 VSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXR-VVIANRT---YDRARELAETVGG 429
                     GK  V++                  + + + NR    +++A   A+ V  
Sbjct: 148 ----------GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNE 197
Query: 430 HA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGH-YALVFDAV 480
           +         LAD   F        IL N T +GM+P  +E+ I   +L     LV + V
Sbjct: 198 NTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECV 257
Query: 481 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 531
           Y P +T+LL++A+++G   + G  M + Q  EQ+E +TG   P +  +++M
Sbjct: 258 YNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFELWTGKAFPLDYVKQVM 308

>pdb|3M7W|A Chain A, Crystal Structure Of Type I 3-Dehydroquinate Dehydratase (Arod) From Salmonella Typhimurium Lt2 In Covalent Complex With Dehydroquinate Length = 255

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 15/229 (6%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 21  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 80
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R   EGG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 81  --LFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 138
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSH 196
             VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   TV  Q  +
Sbjct: 139 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERY 198
Query: 197 V--PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 243
              PII + M + G+ISR+    FG   TFG ++    SAPGQ ++ DL
Sbjct: 199 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGQISVADL 245

>pdb|3L2I|A Chain A, 1.85 Angstrom Crystal Structure Of The 3-Dehydroquinate Dehydratase (Arod) From Salmonella Typhimurium Lt2. Length = 276

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 15/229 (6%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 42  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 101
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R   EGG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 102 --LFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 159
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSH 196
             VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   TV  Q  +
Sbjct: 160 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERY 219
Query: 197 V--PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 243
              PII + M + G+ISR+    FG   TFG ++    SAPGQ ++ DL
Sbjct: 220 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGQISVADL 266

>pdb|3FBT|A Chain A, Crystal Structure Of A Chorismate MutaseSHIKIMATE 5- Dehydrogenase Fusion Protein From Clostridium Acetobutylicum Length = 282

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 31/267 (11%)
Query: 252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 309
           M  +T ++G+IG+ +GHS S  ++   F+ VG  G++    V  + + +   T+      
Sbjct: 1   MSLNTSIYGLIGEKLGHSHSSYIHKLIFEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCG 60
Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG---AISAIED 366
           G + TIP+K   +K   E+   A+ IGAVN +  + S   + G+NTDY+G    +S    
Sbjct: 61  GLNVTIPYKVEVMKELYEISEKARKIGAVNTL--KFSREGISGFNTDYIGFGKMLSKFRV 118
Query: 367 GLRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRAREL 423
            ++  + V   SGG + A+   L                       + +  R  ++  E+
Sbjct: 119 EIKNNICVVLGSGGAARAVLQYL----------------KDNFAKDIYVVTRNPEKTSEI 162
Query: 424 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 483
                   +S  +L N     G ++ N T  GM PK  E+P+ K  +  ++   D +Y P
Sbjct: 163 YGEF--KVISYDELSNLK---GDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNP 217
Query: 484 KITRLLREAEESGATIVSGLEMFIGQA 510
             T  L+ A ESG   V+GL M + QA
Sbjct: 218 VETLFLKYARESGVKAVNGLYMLVSQA 244

>pdb|4GUF|A Chain A, 1.5 Angstrom Crystal Structure Of The Salmonella Enterica 3- Dehydroquinate Dehydratase (arod) E86a Mutant Length = 276

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 15/229 (6%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 42  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 101
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R    GG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 102 --LFTFRSAKAGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 159
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSH 196
             VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   TV  Q  +
Sbjct: 160 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERY 219
Query: 197 V--PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 243
              PII + M + G+ISR+    FG   TFG ++    SAPGQ ++ DL
Sbjct: 220 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGQISVADL 266

>pdb|3O1N|A Chain A, 1.03 Angstrom Crystal Structure Of Q236a Mutant Type I Dehydroquinate Dehydratase (Arod) From Salmonella Typhimurium Length = 276

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 15/229 (6%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 42  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 101
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R   EGG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 102 --LFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 159
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSH 196
             VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   TV  Q  +
Sbjct: 160 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERY 219
Query: 197 V--PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 243
              PII + M + G+ISR+    FG   TFG ++    SAPG  ++ DL
Sbjct: 220 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGAISVADL 266

>pdb|3NNT|A Chain A, Crystal Structure Of K170m Mutant Of Type I 3-Dehydroquinate Dehydratase (Arod) From Salmonella Typhimurium Lt2 In Non-Covalent Complex With Dehydroquinate. Length = 276

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 15/229 (6%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 42  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 101
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R   EGG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 102 --LFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 159
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSH 196
             VI+S+H++  TP+ E++   + ++Q  GADI   A       DV  +   TV  Q  +
Sbjct: 160 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPMIAVMPQTKADVLTLLTATVEMQERY 219
Query: 197 V--PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 243
              PII + M + G+ISR+    FG   TFG ++    SAPGQ ++ DL
Sbjct: 220 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGQISVADL 266

>pdb|1QFE|A Chain A, The Structure Of Type I 3-Dehydroquinate Dehydratase From Salmonella Typhi Length = 252

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 119/239 (49%), Gaps = 15/239 (6%)
Query: 14  LVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKT-- 71
           ++  GM K    I V +MG  ++ +  +      +  D++E R+D   +    +++ T  
Sbjct: 10  IIGEGMPK----IIVSLMGRDINSVKAEALAYREATFDILEWRVDHFMDIASTQSVLTAA 65
Query: 72  -LIKES--PVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVA-REFN 126
            +I+++   +P LFT+R   EGG+        + + R A++ G  D ID+EL     +  
Sbjct: 66  RVIRDAMPDIPLLFTFRSAKEGGEQTITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVK 125
Query: 127 DSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVF 186
            ++         V++S+H++  TPS E++ + + ++QA GADI K A       DV  + 
Sbjct: 126 ATVDYAHAHNVYVVMSNHDFHQTPSAEEMVSRLRKMQALGADIPKIAVMPQSKHDVLTLL 185
Query: 187 QITVHSQVSHV--PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 243
             T+  Q  +   P+I + M + G+ISR+    FG   TFG ++    SAPGQ  + DL
Sbjct: 186 TATLEMQQHYADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQA--SAPGQIAVNDL 242

>pdb|1NPD|A Chain A, X-Ray Structure Of Shikimate Dehydrogenase Complexed With Nad+ From E.Coli (Ydib) Northeast Structural Genomics Research Consortium (Nesg) Target Er24 Length = 288

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           ++ G+   P+ HS SP   N+A +  G    +    VD+       +   +    G   +
Sbjct: 8   ELIGLXAYPIRHSLSPEXQNKALEKAGLPFTYXAFEVDNDSFPGAIEGLKALKXRGTGVS 67
Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGR 371
            P+K+ A +  DE+   AK +GA+N I+    DG L GYNTD  G I AI++    ++G+
Sbjct: 68  XPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGK 125
Query: 372 LNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRT---YDRARELAE 425
             V   +GG S+A+  +  +                     + + NR    +D+A   A+
Sbjct: 126 TXVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQ 169
Query: 426 TVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-V 476
            V  +         LAD + F        IL N T +G +P  +E+ +   +L H  L V
Sbjct: 170 RVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGXKPLENESLVNDISLLHPGLLV 229
Query: 477 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKI 530
            + VY P  T+LL++A+++G   + G    + Q  EQ+  +TG   P E  +++
Sbjct: 230 TECVYNPHXTKLLQQAQQAGCKTIDGYGXLLWQGAEQFTLWTGKDFPLEYVKQV 283

>pdb|1VI2|A Chain A, Crystal Structure Of Shikimate-5-Dehydrogenase With Nad Length = 300

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 314
           ++ G+   P+ HS SP   N+A +  G    +    VD+       +   +    G   +
Sbjct: 10  ELIGLXAYPIRHSLSPEXQNKALEKAGLPFTYXAFEVDNDSFPGAIEGLKALKXRGTGVS 69
Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGR 371
            P+K+ A +  DE+   AK +GA+N I+    DG L GYNTD  G I AI++    ++G+
Sbjct: 70  XPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGK 127
Query: 372 LNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRT---YDRARELAE 425
             V   +GG S+A+  +  +                     + + NR    +D+A   A+
Sbjct: 128 TXVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQ 171
Query: 426 TVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-V 476
            V  +         LAD + F        IL N T +G +P  +E+ +   +L H  L V
Sbjct: 172 RVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGXKPLENESLVNDISLLHPGLLV 231
Query: 477 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKI 530
            + VY P  T+LL++A+++G   + G    + Q  EQ+  +TG   P E  +++
Sbjct: 232 TECVYNPHXTKLLQQAQQAGCKTIDGYGXLLWQGAEQFTLWTGKDFPLEYVKQV 285

>pdb|3U62|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Thermotoga Maritima Length = 253

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 121/262 (46%), Gaps = 39/262 (14%)
Query: 259 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF------VHLLVDDIAKFFQTYSSNDFAGFS 312
           F IIG PV HS SP LYNE FK  G N  +            +I +  + Y      GF+
Sbjct: 3   FCIIGYPVRHSISPRLYNEYFKRAGMNHSYGMEEIPPESFDTEIRRILEEYD-----GFN 57
Query: 313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 372
            TIPHKE  ++  +  +  A+ I AVNC+ R    GK  GYNTD+VG + ++E       
Sbjct: 58  ATIPHKERVMRYVEPSED-AQRIKAVNCVFR----GK--GYNTDWVGVVKSLEGVEVKEP 110
Query: 373 NVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHAL 432
            V  G   A    ++ ++                   + + NRT +RA+ L   V     
Sbjct: 111 VVVVGAGGAARAVIYALLQMGVKD-------------IWVVNRTIERAKALDFPV--KIF 155
Query: 433 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 492
           SL  L+    +    L NTTS+GM  K +E P+   +L + +LV+D +Y    T L+ +A
Sbjct: 156 SLDQLDEV-VKKAKSLFNTTSVGM--KGEELPVSDDSLKNLSLVYDVIYFD--TPLVVKA 210
Query: 493 EESGAT-IVSGLEMFIGQAYEQ 513
            + G   I+ G  MF  QA E 
Sbjct: 211 RKLGVKHIIKGNLMFYYQAMEN 232

>pdb|1NYT|A Chain A, Shikimate Dehydrogenase Aroe Complexed With Nadp+ Length = 271

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 126/292 (43%), Gaps = 41/292 (14%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL--VDDIAKFFQTYSSNDFAGFSCT 314
           + + + G P+ HSKSP ++ +  + +     +  +L  ++D       + S    G + T
Sbjct: 2   ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVT 61
Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE------DGL 368
           +P KE A    DE+   A   GAVN ++R + DG+L G NTD VG +S +E       GL
Sbjct: 62  VPFKEEAFARADELTERAALAGAVNTLMRLE-DGRLLGDNTDGVGLLSDLERLSFIRPGL 120
Query: 369 RGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE--- 425
           R  L  +GG S  +   L  +                    V I NRT  RA ELA+   
Sbjct: 121 RILLIGAGGASRGVLLPLLSL-----------------DCAVTITNRTVSRAEELAKLFA 163
Query: 426 -TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 484
            T    ALS+ +LE    +   ++ N TS G+   +   P      G Y   +D  Y   
Sbjct: 164 HTGSIQALSMDELEGHEFD---LIINATSSGISGDIPAIPSSLIHPGIY--CYDMFYQKG 218
Query: 485 ITRLLREAEESGATI-VSGLEMFIGQAYEQYERFTGL-----PAPKELFQKI 530
            T  L   E+ G+     GL M + QA   +  + G+     P  K+L +++
Sbjct: 219 KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEEL 270

>pdb|3PWZ|A Chain A, Crystal Structure Of An Ael1 Enzyme From Pseudomonas Putida Length = 272

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 259 FGIIGKPVGHSKSPILY-------NEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGF 311
           + +IG+P+ H+KSP+++       N+  +     G      +DD       + S    G 
Sbjct: 5   YAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGS-----LDDFEAQVLQFRSEGGKGM 59
Query: 312 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL--- 368
           + T P K  A +  D     A+   A N +  +  DG++   N D +G +  IE+ L   
Sbjct: 60  NITAPFKLRAFELADRRSERAQLARAANAL--KFEDGRIVAENFDGIGLLRDIEENLGEP 117
Query: 369 -RGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETV 427
            R R  +  G   A+ G L   +                   +VIANR   +A  L   +
Sbjct: 118 LRNRRVLLLGAGGAVRGALLPFLQAGPS-------------ELVIANRDMAKALALRNEL 164
Query: 428 GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 487
               L ++  E    +   I+ N TS  +    D  P+P   LG  AL ++  Y   +T 
Sbjct: 165 DHSRLRISRYEALEGQSFDIVVNATSASL--TADLPPLPADVLGEAALAYELAYGKGLTP 222
Query: 488 LLREAEESG-ATIVSGLEMFIGQAYEQYERFTGL 520
            LR A E G A +  G+ M + QA E +  + G+
Sbjct: 223 FLRLAREQGQARLADGVGMLVEQAAEAFAWWRGV 256

>pdb|2OX1|A Chain A, Archaeal Dehydroquinase Length = 196

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 32/200 (16%)
Query: 47  ASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRL 106
           A  AD+VE+R+D       R + + ++         T R + +GG+++GDE ER++ ++ 
Sbjct: 16  AEKADVVELRIDLFDFSGARVDKEKIL---------TCRRVSDGGKFEGDERERIEKMKR 66
Query: 107 AME-LGADYIDVELQV---AREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARI 162
           A + L  DY+D+E  +   A +FN          C++I S HN+  TP   D S L   +
Sbjct: 67  AFDSLNPDYVDLESDLPDSAFDFN----------CRIIESYHNFIRTP---DYSELKGIV 113
Query: 163 QASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFL 222
           +    D+VK AT      DV  + +I  +    +  ++  +MGER   +R+L A  G   
Sbjct: 114 EGRRGDLVKIATMGKSKRDVETIVRILTN----YDDVVAFLMGERFSFTRVLAAYLGSPF 169
Query: 223 TFGTLENGIVSAPGQPTIKD 242
            +  +  G   APGQ ++ D
Sbjct: 170 IYCYV--GSPKAPGQISLDD 187

>pdb|2YR1|A Chain A, Crystal Structure Of 3-Dehydroquinate Dehydratase From Geobacillus Kaustophilus Hta426 Length = 257

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK-----ESPVPT 80
           IC P++GE   K++ +  +      DL+E R D  +  + +E +             +P 
Sbjct: 22  ICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPI 81
Query: 81  LFTYRPIWEGGQ-YDGDENERVDVLRLAMELGA-DYIDVELQVAREFNDSIRGKKPEKCK 138
           LFT R   EGGQ    +E E   ++      GA D +D EL       D  R  +     
Sbjct: 82  LFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYGERIADVRRMTEECSVW 141
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVS-HV 197
           ++VS H +  TP  E L   + + +  GADI K A       DV  + Q T  ++    +
Sbjct: 142 LVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARRELAI 201
Query: 198 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQ 251
           P+I + MG  G I+R+    FG  +TF        SAPGQ  I D+  + +  Q
Sbjct: 202 PLITMAMGGLGAITRLAGWLFGSAVTFAVGNQS--SAPGQIPIDDVRTVLSILQ 253

>pdb|3PHG|A Chain A, Crystal Structure Of The Shikimate 5-Dehydrogenase (Aroe) From Helicobacter Pylori Length = 269

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 39/277 (14%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 312
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 371
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 372 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 430
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 431 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 486
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y   +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYDLAYG-FLT 214
Query: 487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP 523
             L  A+E       G +M I QA   +E+F+    P
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIP 251

>pdb|1SFL|A Chain A, 1.9a Crystal Structure Of Staphylococcus Aureus Type I 3- Dehydroquinase, Apo Form Length = 238

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 13/220 (5%)
Query: 34  SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK----ESPVPTLFTYRPIWE 89
           S+++ ++          D++E+R+D  +N    +  + + K    +     L TYR   +
Sbjct: 15  SIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQ 74
Query: 90  GG--QYDGDENERVDVLRLAMELGADYIDVELQVAREFNDS---IRGKKPEKCKVIVSSH 144
           GG  Q+  D    + +  LA   G D ID+E Q   +       I   +    +VI+S H
Sbjct: 75  GGYGQFTNDSYLNL-ISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHH 133
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQ-ITVHSQVSHVPIIGLV 203
           N++ TP +++L  +  ++Q    + VK A    +  DV  + Q ++  S      ++G+ 
Sbjct: 134 NFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGIS 193
Query: 204 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 243
           M + GLISR     FGG LT+G +  G   APGQ  + DL
Sbjct: 194 MSKLGLISRTAQGVFGGALTYGCI--GEPQAPGQIDVTDL 231

>pdb|4FSH|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (aroe) Clinical Variant V2356 From Helicobacter Pylori In Complex With Shikimate Length = 271

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 49/282 (17%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDF---- 308
           K FG+ G P+ HSKSP+++N  F    K +GF G +  +L+       +++  N+F    
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKKLGFLGHYRPILLP-----LESHIKNEFLHLG 58
Query: 309 -AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIED 366
            +G + T+P KE A + CD++  +A    ++N ++    +  L GYNTD +G  +S    
Sbjct: 59  LSGANVTLPFKERAFQVCDKIKGIALECASINTLVLENDE--LVGYNTDALGFYLSLKHQ 116
Query: 367 GLRGRLNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE 425
             +  L + SGG + ALA  L                      +V + NR+  R  +  +
Sbjct: 117 NYQNALILGSGGSAKALACGL-----------------KKQGLKVSVLNRS-PRGLDFFQ 158
Query: 426 TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVY 481
            +G           F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y
Sbjct: 159 RLGCDCFMEPPKSAFD-----LIINATSASLN---NELPLNKEVLKGYFKEAKLAYDLAY 210
Query: 482 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP 523
              +T  L  A+E       G +M I QA   +E+F+    P
Sbjct: 211 G-FLTPFLALAKELKIPFQDGKDMLIYQASLSFEKFSASQIP 251

>pdb|1SFJ|A Chain A, 2.4a Crystal Structure Of Staphylococcus Aureus Type I 3- Dehydroquinase, With 3-Dehydroquinate Bound Length = 238

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 13/203 (6%)
Query: 51  DLVEIRLDGLKNFNPRENIKTLIK----ESPVPTLFTYRPIWEGG--QYDGDENERVDVL 104
           D++E+R+D  +N    +  + + K    +     L TYR   +GG  Q+  D    + + 
Sbjct: 32  DVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNL-IS 90
Query: 105 RLAMELGADYIDVELQVAREFNDS---IRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVAR 161
            LA   G D ID+E Q   +       I   +    +VI+S HN++ TP +++L  +  +
Sbjct: 91  DLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFK 150
Query: 162 IQASGADIVKFATTALDITDVARVFQ-ITVHSQVSHVPIIGLVMGERGLISRILCAKFGG 220
           +Q    + VK A    +  DV  + Q ++  S      ++G+ M + GLISR     FGG
Sbjct: 151 MQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGG 210
Query: 221 FLTFGTLENGIVSAPGQPTIKDL 243
            LT+G +  G   APGQ  + DL
Sbjct: 211 ALTYGCI--GEPQAPGQIDVTDL 231

>pdb|4FOO|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237k Mutant From Helicobacter Pylori Length = 271

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 39/277 (14%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 312
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 371
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 372 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 430
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 431 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 486
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y   +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYDLAYG-FLT 214
Query: 487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP 523
             L  A+E       G +M I +A   +E+F+    P
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYKAALSFEKFSASQIP 251

>pdb|4FPX|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237n Mutant From Helicobacter Pylori Length = 271

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 39/277 (14%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 312
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 371
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 372 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 430
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 431 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 486
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y   +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYDLAYG-FLT 214
Query: 487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP 523
             L  A+E       G +M I  A   +E+F+    P
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYNAALSFEKFSASQIP 251

>pdb|4FR5|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Y210s Mutant From Helicobacter Pylori In Complex With Shikimate Length = 271

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 39/277 (14%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 312
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 371
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 372 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 430
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 431 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 486
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D + +  +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYD-LASGFLT 214
Query: 487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP 523
             L  A+E       G +M I QA   +E+F+    P
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIP 251

>pdb|4FOS|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237a Mutant From Helicobacter Pylori In Complex With Shikimate Length = 271

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 39/277 (14%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 312
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 371
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 372 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 430
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 431 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 486
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y   +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYDLAYG-FLT 214
Query: 487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP 523
             L  A+E       G +M I  A   +E+F+    P
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYAAALSFEKFSASQIP 251

>pdb|4FQ8|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Y210a Mutant From Helicobacter Pylori In Complex With Shikimate Length = 271

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 39/277 (14%)
Query: 257 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 312
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 313 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 371
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 372 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 430
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 431 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 486
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D +    +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYD-LAAGFLT 214
Query: 487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAP 523
             L  A+E       G +M I QA   +E+F+    P
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIP 251

>pdb|1NPY|A Chain A, Structure Of Shikimate 5-Dehydrogenase-Like Protein Hi0607 Length = 271

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 33/289 (11%)
Query: 252 MGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 310
           +  DT++   + G+P     +   +N  +  +G N ++      DI    +   +    G
Sbjct: 2   INKDTQLCMSLSGRPSNFGTT--FHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRG 59
Query: 311 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 370
            + ++P KE  +   DE+   A++I +VN I+    +G L  YNTDY+  +  IE     
Sbjct: 60  CAVSMPFKETCMPFLDEIHPSAQAIESVNTIV--NDNGFLRAYNTDYIAIVKLIEKYHLN 117
Query: 371 R-----LNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE 425
           +     ++ SGG++ A+                          ++ I  R     + LA 
Sbjct: 118 KNAKVIVHGSGGMAKAVVAAF----------------KNSGFEKLKIYARNVKTGQYLAA 161
Query: 426 TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGHYALVFDAVYTP 483
             G   ++   LEN   +   IL N TSIGM+   +E  +  PK  + + ++ FD V  P
Sbjct: 162 LYGYAYIN--SLEN---QQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMP 216
Query: 484 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMA 532
             T  +R A+  G   +SG  + + QA EQ+E +T      EL  +  A
Sbjct: 217 VETPFIRYAQARGKQTISGAAVIVLQAVEQFELYTHQRPSDELIAEAAA 265

>pdb|3O8Q|A Chain A, 1.45 Angstrom Resolution Crystal Structure Of Shikimate 5- Dehydrogenase (Aroe) From Vibrio Cholerae Length = 281

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 29/289 (10%)
Query: 252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVH--LLVDDIAKFFQTYSSNDFA 309
           M      + + G P+ HSKSP ++    +    + ++    + VD   +  + + +    
Sbjct: 4   MASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGR 63
Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAIS---AIED 366
           G + T+P KE A +  D +   A+  GAVN  +++  DG++ G NTD  G +    A + 
Sbjct: 64  GCNVTVPFKEEAYRFADRLTERARLAGAVN-TLKKLDDGEILGDNTDGEGLVQDLLAQQV 122
Query: 367 GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAET 426
            L+G   +  G   A  G L  ++                   + + NRT+ +A +LAE 
Sbjct: 123 LLKGATILLIGAGGAARGVLKPLLDQQPAS-------------ITVTNRTFAKAEQLAEL 169
Query: 427 VGGHALSLADLENFNPEDGMILANTTSI---GMQPKVDETPIPKHALGHYALVFDAVYTP 483
           V  +    A       +   ++ N+TS    G  P +D  P+        ++ +D +Y  
Sbjct: 170 VAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAID--PV---IFSSRSVCYDMMYGK 224
Query: 484 KITRLLREAEESG-ATIVSGLEMFIGQAYEQYERFTGL-PAPKELFQKI 530
             T   + A + G A  + GL M +GQA E +  + GL P  K++ +++
Sbjct: 225 GYTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILREL 273

>pdb|3PGJ|A Chain A, 2.49 Angstrom Resolution Crystal Structure Of Shikimate 5- Dehydrogenase (Aroe) From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Shikimate Length = 302

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 29/289 (10%)
Query: 252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVH--LLVDDIAKFFQTYSSNDFA 309
           M      + + G P+ HSKSP ++    +    + ++    + VD   +  + + +    
Sbjct: 25  MASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGR 84
Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAIS---AIED 366
           G + T+P KE A +  D +   A+  GAVN  +++  DG++ G NTD  G +    A + 
Sbjct: 85  GCNVTVPFKEEAYRFADRLTERARLAGAVN-TLKKLDDGEILGDNTDGEGLVQDLLAQQV 143
Query: 367 GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAET 426
            L+G   +  G   A  G L  ++                   + + NRT+ +A +LAE 
Sbjct: 144 LLKGATILLIGAGGAARGVLKPLLDQQPAS-------------ITVTNRTFAKAEQLAEL 190
Query: 427 VGGHALSLADLENFNPEDGMILANTTSI---GMQPKVDETPIPKHALGHYALVFDAVYTP 483
           V  +    A       +   ++ N+TS    G  P +D  P+        ++ +D +Y  
Sbjct: 191 VAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAID--PV---IFSSRSVCYDMMYGK 245
Query: 484 KITRLLREAEESG-ATIVSGLEMFIGQAYEQYERFTGL-PAPKELFQKI 530
             T   + A + G A  + GL M +GQA E +  + GL P  K++ +++
Sbjct: 246 GYTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILREL 294

>pdb|3O8Q|B Chain B, 1.45 Angstrom Resolution Crystal Structure Of Shikimate 5- Dehydrogenase (Aroe) From Vibrio Cholerae Length = 275

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 29/282 (10%)
Query: 259 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVH--LLVDDIAKFFQTYSSNDFAGFSCTIP 316
           + + G P+ HSKSP ++    +    + ++    + VD   +  + + +    G + T+P
Sbjct: 5   YAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVP 64
Query: 317 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAIS---AIEDGLRGRLN 373
            KE A +  D +   A+  GAVN  +++  DG++ G NTD  G +    A +  L+G   
Sbjct: 65  FKEEAYRFADRLTERARLAGAVN-TLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATI 123
Query: 374 VSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALS 433
           +  G   A  G L  ++                   + + NRT+ +A +LAE V  +   
Sbjct: 124 LLIGAGGAARGVLKPLLDQQPAS-------------ITVTNRTFAKAEQLAELVAAYGEV 170
Query: 434 LADLENFNPEDGMILANTTSI---GMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 490
            A       +   ++ N+TS    G  P +D  P+        ++ +D +Y    T   +
Sbjct: 171 KAQAFEQLKQSYDVIINSTSASLDGELPAID--PV---IFSSRSVCYDMMYGKGYTVFNQ 225
Query: 491 EAEESG-ATIVSGLEMFIGQAYEQYERFTGL-PAPKELFQKI 530
            A + G A  + GL M +GQA E +  + GL P  K++ +++
Sbjct: 226 WARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILREL 267

>pdb|2EGZ|A Chain A, Crystal Structure Of The 3-Dehydroquinate Dehydratase From Aquifex Aeolicus Vf5 Length = 219

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 23/228 (10%)
Query: 25  LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKN--FNPRENIKTLIKESPVPTLF 82
           LI VP+   +  +   ++ KA   GAD+VE+R+D   +   N  +     +    + T+ 
Sbjct: 2   LIAVPLDDTNFSE---NLKKAKEKGADIVELRVDQFSDTSLNYVKEKLEEVHSQGLKTIL 58
Query: 83  TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQ----VAREFNDSIRGKKPEKCK 138
           T R   EGG+   +  E  + L       +DY D+EL     + + +N +    K    K
Sbjct: 59  TIRSPEEGGREVKNREELFEELSPL----SDYTDIELSSRGLLVKLYNITKEAGK----K 110
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVP 198
           +I+S HN++ TP    +  ++      G  I K A  A    DVAR+  I+   QV    
Sbjct: 111 LIISYHNFELTPPNWIIREVLREGYRYGG-IPKIAVKANSYEDVARLLCIS--RQVEGEK 167
Query: 199 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDL 246
           I+ + MG+ G ISR+    FG  +T+ +LE     APGQ  ++++++L
Sbjct: 168 IL-ISMGDYGKISRLAGYVFGSVITYCSLEKAF--APGQIPLEEMVEL 212

>pdb|3JYO|A Chain A, Quinate Dehydrogenase From Corynebacterium Glutamicum In Complex With Nad Length = 283

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 111/281 (39%), Gaps = 29/281 (10%)
Query: 255 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSND 307
           D+ + G+IG+ +  S++P ++     + G   V+  +          D+           
Sbjct: 3   DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLG 62
Query: 308 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 367
           F G + T P+K+A +   DEV   A  +GAVN ++   + G   G+NTD  G    +E+G
Sbjct: 63  FNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVI-DATGHTTGHNTDVSGFGRGMEEG 121
Query: 368 LRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE-- 425
           L           +A    +  V                   ++ +A+    RA+ LA+  
Sbjct: 122 L----------PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171
Query: 426 --TVGGHALSLADLENFN----PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA 479
              VG  A+   D           DG++  N T +GM P    T      L     V D 
Sbjct: 172 NNAVGREAVVGVDARGIEDVIAAADGVV--NATPMGM-PAHPGTAFDVSCLTKDHWVGDV 228
Query: 480 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 520
           VY P  T LL+ A   G   + G  M I QA + +  FTGL
Sbjct: 229 VYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGL 269

>pdb|2NLO|A Chain A, Crystal Structure Of The Quinate Dehydrogenase From Corynebacterium Glutamicum Length = 302

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 113/287 (39%), Gaps = 29/287 (10%)
Query: 249 FRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQ 301
           F+    D+ + G+IG+ +  S++P ++     + G   V+  +          D+     
Sbjct: 16  FQGAMNDSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLD 75
Query: 302 TYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAI 361
                 F G + T P+K+A +   DEV   A  +GAVN ++   + G   G+NTD  G  
Sbjct: 76  AALYLGFNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVI-DATGHTTGHNTDVSGFG 134
Query: 362 SAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRAR 421
             +E+GL           +A    +  V                   ++ +A+    RA+
Sbjct: 135 RGMEEGL----------PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQ 184
Query: 422 ELAE----TVGGHALSLADLENFN----PEDGMILANTTSIGMQPKVDETPIPKHALGHY 473
            LA+     VG  A+   D           DG++  N T +GM P    T      L   
Sbjct: 185 ALADVINNAVGREAVVGVDARGIEDVIAAADGVV--NATPMGM-PAHPGTAFDVSCLTKD 241
Query: 474 ALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 520
             V D VY P  T LL+ A   G   + G  M I QA + +  FTGL
Sbjct: 242 HWVGDVVYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGL 288

>pdb|3L9C|A Chain A, The Crystal Structure Of Smu.777 From Streptococcus Mutans Ua159 Length = 259

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 35/254 (13%)
Query: 7   LVASGSKLVS--GG--MRKNPTLICVPIMGESVDKM-VVDMGKANASGADLVEIRLDGLK 61
           LV  GS + S  GG  M +    I VP+M +++++   +D+ + +++  D++E R D L 
Sbjct: 14  LVPRGSHMASMTGGQQMGRGSMKIVVPVMPQNIEEANQLDLTRIDST--DIIEWRADYLV 71
Query: 62  NFNPRENIKTLI-----KESPVPTLFTYRPIWEGGQYDGDENERVDVLR-LAMELGADYI 115
               +++I T+      K S    +FT R   EGG       + + ++R +A     DYI
Sbjct: 72  ----KDDILTVAPAIFEKFSGHEVIFTLRTEKEGGNISLSNEDYLAIIRDIAALYQPDYI 127
Query: 116 DVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATT 175
           D E    R+  + +     +   +I+S HN++ TP  E+L  + + + A    +VK A  
Sbjct: 128 DFEYFSYRDVLEEMY----DFSNLILSYHNFEETP--ENLMEVFSELTALAPRVVKIAVM 181
Query: 176 ------ALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLEN 229
                  LD+ +  R F+    +Q      + + M + G ISR+     G   TF +LE 
Sbjct: 182 PKNEQDVLDLMNYTRGFKTLNPNQ----EYVTMSMSKLGRISRLAADLIGSSWTFASLEQ 237
Query: 230 GIVSAPGQPTIKDL 243
              SAPGQ ++ D+
Sbjct: 238 E--SAPGQISLADM 249

>pdb|1P74|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) From Haemophilus Influenzae Length = 272

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 25/271 (9%)
Query: 258 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL--VDDIAKFFQTYSSNDFAGFSCTI 315
           ++ + G P+  SKSP++ N+          ++  L  +D   +    +      G + T 
Sbjct: 3   LYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITS 62
Query: 316 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE--DGLRGRLN 373
           P KE A +  DE    AK   A N + ++  DGKL+  NTD +G ++ ++  + LR   +
Sbjct: 63  PFKERAYQLADEYSQRAKLAEACNTL-KKLDDGKLYADNTDGIGLVTDLQRLNWLRPNQH 121
Query: 374 VS-GGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHA- 431
           V   G   A  G L  ++                   +V+ANRT+ + +ELAE    +  
Sbjct: 122 VLILGAGGATKGVLLPLLQAQQ--------------NIVLANRTFSKTKELAERFQPYGN 167
Query: 432 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-TRLLR 490
           +    +++   +   ++ N TS G+             LG  +  +D  Y     T  + 
Sbjct: 168 IQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLG--SAFYDMQYAKGTDTPFIA 225
Query: 491 EAEESGATIVS-GLEMFIGQAYEQYERFTGL 520
             +  G T VS G  M + QA   +  + G+
Sbjct: 226 LCKSLGLTNVSDGFGMLVAQAAHSFHLWRGV 256

>pdb|2OCZ|A Chain A, The Structure Of A Putative 3-dehydroquinate Dehydratase From Streptococcus Pyogenes Length = 231

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 31/234 (13%)
Query: 22  NPTLICVPIMGESVDK-MVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI-----KE 75
           N   I  P+     D+   +D+ K      +L+E R D    F P++ I  +      K 
Sbjct: 2   NAXRIVAPVXPRHFDEAQAIDISKY--EDVNLIEWRAD----FLPKDEIVAVAPAIFEKF 55
Query: 76  SPVPTLFTYRPIWEGGQYDGDENERVDVLR-LAMELGADYIDVELQVAREFNDSIRGKKP 134
           +    +FT R + EGG       E VD+++ +      DYID E    +    S+  +  
Sbjct: 56  AGKEIIFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYIDFEYFTHK----SVFQEXL 111
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATT------ALDITDVARVFQI 188
           +   +I+S HN++ TP  E+L    +        +VK A         LD+ +  R F+ 
Sbjct: 112 DFPNLILSYHNFEETP--ENLXEAFSEXTKLAPRVVKIAVXPQSEQDVLDLXNYTRGFKT 169
Query: 189 TVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD 242
               Q        +  G+ G +SR      G   T+ +L++  VS PGQ T+ D
Sbjct: 170 LNPEQ----EFATISXGKLGRLSRFAGDVIGSSWTYVSLDH--VSGPGQVTLND 217

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	534
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	0.0
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	1e-116
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	1e-109
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	1e-108
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	1e-107
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	1e-106
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	1e-104
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	1e-101
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	1e-101
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	5e-99
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	7e-96
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	7e-93
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	6e-88
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	3e-76
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	1e-75
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	2e-75
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	1e-72
1sfl_A	238	3-dehydroquinate dehydratase; 3-dehydroquinase, en	3e-70
2yr1_A	257	3-dehydroquinate dehydratase; amino acid biosynthe	5e-70
2egz_A	219	3-dehydroquinate dehydratase; aquifex aeolicus VF5	3e-68
2ocz_A	231	3-dehydroquinate dehydratase; structural genomics,	4e-66
3js3_A	258	3-dehydroquinate dehydratase; AROD, covalent react	4e-66
3o1n_A	276	3-dehydroquinate dehydratase; structural genomics,	3e-65
3l9c_A	259	3-dehydroquinate dehydratase; AROD, amino-acid bio	8e-65
2ox1_A	196	3-dehydroquinate dehydratase; (beta-alpha)8 barrel	8e-60
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	2e-12
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	7e-10
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	8e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-06
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	3e-06
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	8e-06
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-05
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	3e-05
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	4e-05
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	4e-05
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	4e-05
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	5e-05
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	6e-05
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	8e-05
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	8e-05
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	9e-05
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-04
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-04
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	1e-04
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-04
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	2e-04
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-04
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	2e-04
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-04
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-04
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-04
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-04
3imf_A	257	Short chain dehydrogenase; structural genomics, in	3e-04
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-04
4dqx_A	277	Probable oxidoreductase protein; structural genomi	3e-04
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-04
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	3e-04
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-04
3atr_A	453	Conserved archaeal protein; saturating double bond	3e-04
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-04
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-04
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-04
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	5e-04
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	5e-04
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	5e-04
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	6e-04
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	6e-04
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	6e-04
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	7e-04
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	7e-04
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	7e-04
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	8e-04
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	8e-04
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	8e-04
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	9e-04

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* Length = 523

 Score =  693 bits (1789), Expect = 0.0
 Identities = 391/516 (75%), Positives = 447/516 (86%), Gaps = 5/516 (0%)

Query: 21  KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
           KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRLD LK+FNP E++KT+IK+SP+PT
Sbjct: 2   KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61

Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           LFTYRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF  SI GKKP K KVI
Sbjct: 62  LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121

Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPII 200
           VSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+DI DVAR+F IT  +QV   P I
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQV---PTI 178

Query: 201 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 260
           GLVMGERGL+SRILC+KFGG+LTFGTL++  VSAPGQPTIKDLLDLYNFR++GPDTKV+G
Sbjct: 179 GLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYG 238

Query: 261 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 320
           IIGKPV HSKSPI++N+AFKSV FNGV+VHLLVD++  F Q YSS+DFAGFSCTIPHKEA
Sbjct: 239 IIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEA 298

Query: 321 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLNVSGGV 378
           A++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR  G  +     
Sbjct: 299 ALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSS 358

Query: 379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 438
           SS LA K  VVIGAGGAGKALAYGAK KGA+VVIANRTY+RA ELAE +GG ALSL DL+
Sbjct: 359 SSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLD 418

Query: 439 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 498
           N++PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA 
Sbjct: 419 NYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAI 478

Query: 499 IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
            VSG EMF+ QAYEQ+E FTGLPAPKEL+ +IM+KY
Sbjct: 479 TVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIMSKY 514

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* Length = 312

 Score =  345 bits (887), Expect = e-116
 Identities = 88/316 (27%), Positives = 147/316 (46%), Gaps = 28/316 (8%)

Query: 233 SAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL 292
           S+      ++L    N   +    ++ G++  P+ HS SP + N+A +  G    ++   
Sbjct: 8   SSGVDLGTENLYFQSNAMDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPYTYMAFE 67

Query: 293 V--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKL 350
           V     A   +   +    G   ++P+K+ A +  DE+   AK +GA+N I+    DG L
Sbjct: 68  VDNTTFASAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVND--DGYL 125

Query: 351 FGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-R 409
            GYNTD  G I AI++               + GK  V++GAGGA  A+   A  +G   
Sbjct: 126 RGYNTDGTGHIRAIKESGFD-----------MRGKTMVLLGAGGAATAIGAQAAIEGIKE 174

Query: 410 VVIANRT---YDRARELAETVGGHA------LSLADLENFNP--EDGMILANTTSIGMQP 458
           + + NR    +++A   A+ V  +         LAD   F        IL N T +GM+P
Sbjct: 175 IKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKP 234

Query: 459 KVDETPI-PKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERF 517
             +E+ I     L    LV + VY P +T+LL++A+++G   + G  M + Q  EQ+E +
Sbjct: 235 LENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFELW 294

Query: 518 TGLPAPKELFQKIMAK 533
           TG   P +  +++M  
Sbjct: 295 TGKAFPLDYVKQVMGF 310

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 Length = 287

 Score =  326 bits (839), Expect = e-109
 Identities = 102/293 (34%), Positives = 151/293 (51%), Gaps = 25/293 (8%)

Query: 252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 309
           +   TKV G+IG PV HS SPI++N AFK  G N V+V   V  +++        +    
Sbjct: 7   INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 66

Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 369
           GF+ TIPHK   +K  DE+D  A+ IGAVN I     DGK  GYNTD +GA  A+E+ + 
Sbjct: 67  GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIE--DGKAIGYNTDGIGARMALEEEI- 123

Query: 370 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG- 428
                       +  K  V+ GAGGA +A+A+   AK   ++IANRT ++A  LA+ +  
Sbjct: 124 ----------GRVKDKNIVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEIAE 172

Query: 429 ------GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYALVFDAVY 481
                 G  +  + L+  + +   I+ N T IGM P +D  PI     L    +V D +Y
Sbjct: 173 KLNKKFGEEVKFSGLDV-DLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIY 231

Query: 482 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
            P  T LL+EA++  A  ++GL M I Q    ++ +TG+    E+ +  +   
Sbjct: 232 NPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDK 284

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* Length = 315

 Score =  324 bits (832), Expect = e-108
 Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 29/318 (9%)

Query: 230 GIVSAPGQPTIKDLLDLYNFRQM-GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF 288
           G+         +         +     T++ G+I  P+ HS SP ++NEAF  +G + V+
Sbjct: 10  GVDLGTENLYFQSNAMTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVY 69

Query: 289 VHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQS 346
           +   V   ++    Q + + +  G++ ++P+K    K  D++   A+ +GAVN ++    
Sbjct: 70  LAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND-- 127

Query: 347 DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAK 406
           DG L G+ TD  G + A+++               + GK   + GAGGA  A+   A   
Sbjct: 128 DGVLTGHITDGTGYMRALKEAGHD-----------IIGKKMTICGAGGAATAICIQAALD 176

Query: 407 GA-RVVIANRT---YDRARELAETVGGH------ALSLADLENFNPE--DGMILANTTSI 454
           G   + I NR    Y  A +  E +            + D E    E  + +I  N T +
Sbjct: 177 GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGV 236

Query: 455 GMQPKVDETPIP-KHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQ 513
           GM+P   ET +P    L    +V D VY P  TRLL  AEE G   ++GL M + Q  + 
Sbjct: 237 GMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKA 296

Query: 514 YERFTGLPAPKELFQKIM 531
           +E +T    P +  ++I+
Sbjct: 297 FEIWTHKEMPVDYIKEIL 314

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} Length = 297

 Score =  322 bits (829), Expect = e-107
 Identities = 94/291 (32%), Positives = 146/291 (50%), Gaps = 17/291 (5%)

Query: 248 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSS 305
           N    G   KV+G+IG PV HS SP+++N+AF  +G    +    V    +        +
Sbjct: 15  NLYFQGHMEKVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRA 74

Query: 306 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 365
              AG + TIPHK A +   DEVD  A+ IGAVN II    DG+L GYNTD +G + A+E
Sbjct: 75  LGIAGVNVTIPHKLAVIPFLDEVDEHARRIGAVNTIINN--DGRLVGYNTDGLGYVQALE 132

Query: 366 DGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELA 424
           + +             L GK  +VIGAGG  + + +   +  A R+ +ANRT ++A  L 
Sbjct: 133 EEMNI----------TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLV 182

Query: 425 ETVGGHALSLADLENFN--PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT 482
                   +   L        +  I+ NTTS+GM P+V+  P+    L    +V D +Y 
Sbjct: 183 REGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYN 242

Query: 483 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK 533
           P  T+ L+EA+  GA + +G+ M + Q    +E++TG        ++++ +
Sbjct: 243 PLETKWLKEAKARGARVQNGVGMLVYQGALAFEKWTGQWPDVNRMKQLVIE 293

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 Length = 271

 Score =  319 bits (819), Expect = e-106
 Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 25/285 (8%)

Query: 252 MGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 310
           +  DT++   + G+P   +     +N  +  +G N ++      DI    +   +    G
Sbjct: 2   INKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRG 59

Query: 311 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 370
            + ++P KE  +   DE+   A++I +VN I+    +G L  YNTDY+  +  IE     
Sbjct: 60  CAVSMPFKETCMPFLDEIHPSAQAIESVNTIVND--NGFLRAYNTDYIAIVKLIEKYHLN 117

Query: 371 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGG 429
           +                +V G+GG  KA+      +   ++ I  R     + LA   G 
Sbjct: 118 K------------NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG- 164

Query: 430 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGHYALVFDAVYTPKITR 487
                A + +   +   IL N TSIGM+   +E  +  PK  + + ++ FD V  P  T 
Sbjct: 165 ----YAYINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETP 220

Query: 488 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMA 532
            +R A+  G   +SG  + + QA EQ+E +T      EL  +  A
Sbjct: 221 FIRYAQARGKQTISGAAVIVLQAVEQFELYTHQRPSDELIAEAAA 265

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Length = 275

 Score =  312 bits (802), Expect = e-104
 Identities = 79/291 (27%), Positives = 150/291 (51%), Gaps = 21/291 (7%)

Query: 246 LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTY 303
            ++   +   T+++G+IG PV HS SP+  N   +  G N V++   +  +++ K F+ +
Sbjct: 2   HHHHHMINAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGF 61

Query: 304 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA 363
            +    G + T+P KE  +   D V+  AK IGAVN +     +GK +GYNTD++G + +
Sbjct: 62  KALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKFE--NGKAYGYNTDWIGFLKS 119

Query: 364 IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 423
           ++  +             +  K  +V+GAGGA +A+ Y    +GA+V + NRT ++A +L
Sbjct: 120 LKSLIPE-----------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKL 168

Query: 424 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 483
           A+      ++  +      +   ++ NTTS+G++ + D        +    +V D +Y  
Sbjct: 169 AQKFPLEVVNSPEEV---IDKVQVIVNTTSVGLKDE-DPEIFNYDLIKKDHVVVDIIYKE 224

Query: 484 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 534
             T+LL++A+E GA ++ GL M + Q  E ++ + G   P  + ++ +   
Sbjct: 225 --TKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVPYSVAERSVRDL 273

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} Length = 282

 Score =  306 bits (786), Expect = e-101
 Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 21/282 (7%)

Query: 252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 309
           M  +T ++G+IG+ +GHS S  ++   F+ VG  G++    V  + + +   T+      
Sbjct: 1   MSLNTSIYGLIGEKLGHSHSSYIHKLIFEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCG 60

Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 369
           G + TIP+K   +K   E+   A+ IGAVN +        + G+NTDY+G    +     
Sbjct: 61  GLNVTIPYKVEVMKELYEISEKARKIGAVNTLKFS--REGISGFNTDYIGFGKMLSK--- 115

Query: 370 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVG 428
               V       +   + VV+G+GGA +A+    K   A+ + +  R  ++  E+     
Sbjct: 116 --FRVE------IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF- 166

Query: 429 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 488
              +S  +L N     G ++ N T  GM PK  E+P+ K  +  ++   D +Y P  T  
Sbjct: 167 -KVISYDELSNL---KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLF 222

Query: 489 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKI 530
           L+ A ESG   V+GL M + QA    E +  +   + +  +I
Sbjct: 223 LKYARESGVKAVNGLYMLVSQAAASEEIWNDISIDEIIVDEI 264

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* Length = 263

 Score =  303 bits (779), Expect = e-101
 Identities = 86/277 (31%), Positives = 130/277 (46%), Gaps = 23/277 (8%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 314
             F ++G PV HS SP ++  A +S+G  G +       + +    +      F G + T
Sbjct: 2   LRFAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-FRGVNLT 60

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
           +P KEAA+   D V   A+ IGAVN +++   +G+LFG+NTD  G + A++ G       
Sbjct: 61  LPLKEAALAHLDWVSPEAQRIGAVNTVLQV--EGRLFGFNTDAPGFLEALKAGG------ 112

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 434
                  L G   +V+GAGGAG+A+A+  +  G  V + NRT  RA  LAE  G  A+ L
Sbjct: 113 -----IPLKGPA-LVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPL 166

Query: 435 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 494
                       +L N T +G++     +P+P           D VY P  TR LREA+ 
Sbjct: 167 EKAREAR-----LLVNATRVGLEDP-SASPLPAELFPEEGAAVDLVYRPLWTRFLREAKA 220

Query: 495 SGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 531
            G  + +GL M   Q    +  +TGL       ++  
Sbjct: 221 KGLKVQTGLPMLAWQGALAFRLWTGLLPDPSGMEEAA 257

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A Length = 283

 Score =  299 bits (769), Expect = 5e-99
 Identities = 74/293 (25%), Positives = 115/293 (39%), Gaps = 27/293 (9%)

Query: 255 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSND 307
           D+ + G+IG+ +  S++P ++     + G   V+  +          D+           
Sbjct: 3   DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLG 62

Query: 308 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 367
           F G + T P+K+A +   DEV   A  +GAVN ++     G   G+NTD  G    +E+G
Sbjct: 63  FNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEG 121

Query: 368 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAET 426
           L                   V +GAGG G A+AY     G  ++ +A+    RA+ LA+ 
Sbjct: 122 LPN-----------AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADV 170

Query: 427 VGGH----ALSLADLENFN--PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 480
           +       A+   D             + N T +GM      T      L     V D V
Sbjct: 171 INNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAH-PGTAFDVSCLTKDHWVGDVV 229

Query: 481 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK 533
           Y P  T LL+ A   G   + G  M I QA + +  FTGL       ++    
Sbjct: 230 YMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRMRETFLS 282

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* Length = 269

 Score =  291 bits (747), Expect = 7e-96
 Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 29/281 (10%)

Query: 256 TKVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGF 311
            K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G 
Sbjct: 3   LKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGA 62

Query: 312 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 371
           + T+P KE A + CD++  +A   GAVN ++    + +L GYNTD +G   +++      
Sbjct: 63  NVTLPFKERAFQVCDKIKGIALECGAVNTLVLE--NDELVGYNTDALGFYLSLKQ----- 115

Query: 372 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 431
                        +  +++GAGG+ KALA   K +G +V + NR+     +  + +G   
Sbjct: 116 ----------KNYQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGL-DFFQRLGCDC 164

Query: 432 LSLADLENFNPEDGMILANTTSIGMQPKVD-ETPIPKHALGHYALVFDAVYTPKITRLLR 490
                   F+     ++ N TS  +  ++     + K       L +D  Y    T  L 
Sbjct: 165 FMEPPKSAFD-----LIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGFL-TPFLS 218

Query: 491 EAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 531
            A+E       G +M I QA   +E+F+    P     ++M
Sbjct: 219 LAKELKTPFQDGKDMLIYQAALSFEKFSASQIPYSKAFEVM 259

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* Length = 277

 Score =  284 bits (728), Expect = 7e-93
 Identities = 83/278 (29%), Positives = 140/278 (50%), Gaps = 20/278 (7%)

Query: 259 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIP 316
           F +IG P+ HS SP++++  F+S+     +  + V  +      +  S     GF+ TIP
Sbjct: 3   FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62

Query: 317 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 376
           HKE  +   D+++  AKS+GAVN ++ +  DGK  GYNTD +G ++ ++    G      
Sbjct: 63  HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEG------ 114

Query: 377 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 435
                +     +++GAGGA K +A    K     + +ANRT  R    +  +    ++L+
Sbjct: 115 -----IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNIN--KINLS 167

Query: 436 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 495
             E+    +  I+ NTT  GM     ++ I  + L  + LV D VY P  T +L EAE+ 
Sbjct: 168 HAESHLD-EFDIIINTTPAGMNGN-TDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQR 225

Query: 496 GATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK 533
           G  I +GL+MF+ Q  E ++ +T L    +  + I+ +
Sbjct: 226 GNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQ 263

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Length = 253

 Score =  270 bits (692), Expect = 6e-88
 Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 35/279 (12%)

Query: 259 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIP 316
           F IIG PV HS SP LYNE FK  G N  +    +  +      +     ++ GF+ TIP
Sbjct: 3   FCIIGYPVRHSISPRLYNEYFKRAGMNHSYGMEEIPPESFDTEIRRI-LEEYDGFNATIP 61

Query: 317 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 376
           HKE  ++  +  +  A+ I AVNC+ R +      GYNTD+VG + ++E           
Sbjct: 62  HKERVMRYVEPSED-AQRIKAVNCVFRGK------GYNTDWVGVVKSLEG---------- 104

Query: 377 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 435
                   +  VV+GAGGA +A+ Y   +     + + NRT +RA+ L   V     SL 
Sbjct: 105 ----VEVKEPVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK--IFSLD 158

Query: 436 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 495
            L+         L NTTS+GM+   +E P+   +L + +LV+D +Y    T L+ +A + 
Sbjct: 159 QLDEVVK-KAKSLFNTTSVGMKG--EELPVSDDSLKNLSLVYDVIYFD--TPLVVKARKL 213

Query: 496 GAT-IVSGLEMFIGQAYEQYERFTGLPAP--KELFQKIM 531
           G   I+ G  MF  QA E  + +        KE+F +++
Sbjct: 214 GVKHIIKGNLMFYYQAMENLKIWGIYDEEVFKEVFGEVL 252

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 Length = 271

 Score =  240 bits (616), Expect = 3e-76
 Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 24/274 (8%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 314
           + + + G P+ HSKSP ++ +  + +     +  +L   +D       + S    G + T
Sbjct: 2   ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVT 61

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
           +P KE A    DE+   A   GAVN ++R + DG+L G NTD VG +S +E     RL+ 
Sbjct: 62  VPFKEEAFARADELTERAALAGAVNTLMRLE-DGRLLGDNTDGVGLLSDLE-----RLSF 115

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H 430
                    G   ++IGAGGA + +     +    V I NRT  RA ELA+         
Sbjct: 116 I------RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQ 169

Query: 431 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 490
           ALS+ +LE     +  ++ N TS G+    D   IP   +      +D  Y    T  L 
Sbjct: 170 ALSMDELEG---HEFDLIINATSSGISG--DIPAIPSSLIHPGIYCYDMFYQKGKTPFLA 224

Query: 491 EAEESGATIVS-GLEMFIGQAYEQYERFTGLPAP 523
             E+ G+   + GL M + QA   +  + G+   
Sbjct: 225 WCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPD 258

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Length = 281

 Score =  239 bits (612), Expect = 1e-75
 Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 20/278 (7%)

Query: 251 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 308
            M      + + G P+ HSKSP ++    +    + ++    V  D   +  + + +   
Sbjct: 3   AMASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGG 62

Query: 309 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 368
            G + T+P KE A +  D +   A+  GAVN + +   DG++ G NTD  G +  +    
Sbjct: 63  RGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLD-DGEILGDNTDGEGLVQDLL--- 118

Query: 369 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETV 427
                V       L G   ++IGAGGA + +       + A + + NRT+ +A +LAE V
Sbjct: 119 --AQQVL------LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELV 170

Query: 428 GGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 486
             +  +     E       +I+ N+TS  +    +   I        ++ +D +Y    T
Sbjct: 171 AAYGEVKAQAFEQLKQSYDVII-NSTSASLDG--ELPAIDPVIFSSRSVCYDMMYGKGYT 227

Query: 487 RLLREAEESGAT-IVSGLEMFIGQAYEQYERFTGLPAP 523
              + A + G    + GL M +GQA E +  + GL   
Sbjct: 228 VFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPG 265

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} Length = 272

 Score =  238 bits (610), Expect = 2e-75
 Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 18/272 (6%)

Query: 256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 313
           +  + +IG+P+ H+KSP+++    ++      +  +    DD       + S    G + 
Sbjct: 2   SDRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNI 61

Query: 314 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 373
           T P K  A +  D     A+   A N +     DG++   N D +G +  IE+     L 
Sbjct: 62  TAPFKLRAFELADRRSERAQLARAANALKFE--DGRIVAENFDGIGLLRDIEE----NLG 115

Query: 374 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 432
                   L  +  +++GAGGA +       +A  + +VIANR   +A  L   +    L
Sbjct: 116 EP------LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRL 169

Query: 433 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 492
            ++  E    +   I+ N TS  +    D  P+P   LG  AL ++  Y   +T  LR A
Sbjct: 170 RISRYEALEGQSFDIVVNATSASLTA--DLPPLPADVLGEAALAYELAYGKGLTPFLRLA 227

Query: 493 EESGA-TIVSGLEMFIGQAYEQYERFTGLPAP 523
            E G   +  G+ M + QA E +  + G+   
Sbjct: 228 REQGQARLADGVGMLVEQAAEAFAWWRGVRPD 259

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* Length = 272

 Score =  231 bits (592), Expect = 1e-72
 Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 19/269 (7%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 314
            ++ + G P+  SKSP++ N+          ++  L   D   +    +      G + T
Sbjct: 2   DLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNIT 61

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 374
            P KE A +  DE    AK   A N + +   DGKL+  NTD +G ++ ++     RLN 
Sbjct: 62  SPFKERAYQLADEYSQRAKLAEACNTLKKLD-DGKLYADNTDGIGLVTDLQ-----RLNW 115

Query: 375 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LS 433
                     +  +++GAGGA K +          +V+ANRT+ + +ELAE    +  + 
Sbjct: 116 L------RPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ 169

Query: 434 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT-PKITRLLREA 492
              +++   +   ++ N TS G+        +    L   +  +D  Y     T  +   
Sbjct: 170 AVSMDSIPLQTYDLVINATSAGLSG--GTASVDAEILKLGSAFYDMQYAKGTDTPFIALC 227

Query: 493 EESGATIVS-GLEMFIGQAYEQYERFTGL 520
           +  G T VS G  M + QA   +  + G+
Sbjct: 228 KSLGLTNVSDGFGMLVAQAAHSFHLWRGV 256

>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A* Length = 238

 Score =  224 bits (571), Expect = 3e-70
 Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 14/240 (5%)

Query: 19  MRKNPTLICVPIMGE-SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK--- 74
           M      +   I  + S+++ ++          D++E+R+D  +N    +  + + K   
Sbjct: 1   MTH--VEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKV 58

Query: 75  -ESPVPTLFTYRPIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREFNDS---I 129
            +     L TYR   +GG      +  ++++  LA   G D ID+E Q   +       I
Sbjct: 59  MQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRII 118

Query: 130 RGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT 189
              +    +VI+S HN++ TP +++L  +  ++Q    + VK A    +  DV  + Q  
Sbjct: 119 THLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAM 178

Query: 190 V-HSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 248
              S      ++G+ M + GLISR     FGG LT+G +      APGQ  + DL     
Sbjct: 179 STFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGE--PQAPGQIDVTDLKAQVT 236

>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus} Length = 257

 Score =  224 bits (571), Expect = 5e-70
 Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 10/239 (4%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPV 78
             IC P++GE   K++ +  +      DL+E R D  +  + +E +             +
Sbjct: 20  PCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEI 79

Query: 79  PTLFTYRPIWEGGQY-DGDENERVDVLRLAMELGA-DYIDVELQVAREFNDSIRGKKPEK 136
           P LFT R   EGGQ    +E E   ++      GA D +D EL       D  R  +   
Sbjct: 80  PILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYGERIADVRRMTEECS 139

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSH 196
             ++VS H +  TP  E L   + + +  GADI K A       DV  + Q T  ++   
Sbjct: 140 VWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARREL 199

Query: 197 -VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGP 254
            +P+I + MG  G I+R+    FG  +TF        SAPGQ  I D+  + +  Q   
Sbjct: 200 AIPLITMAMGGLGAITRLAGWLFGSAVTFAVGNQ--SSAPGQIPIDDVRTVLSILQTYS 256

>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A Length = 219

 Score =  218 bits (556), Expect = 3e-68
 Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 15/226 (6%)

Query: 25  LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTL--IKESPVPTLF 82
           LI VP+   +  + +    KA   GAD+VE+R+D   + +     + L  +    + T+ 
Sbjct: 2   LIAVPLDDTNFSENLK---KAKEKGADIVELRVDQFSDTSLNYVKEKLEEVHSQGLKTIL 58

Query: 83  TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
           T R   EGG+   +  E  +     +   +DY D+EL             K    K+I+S
Sbjct: 59  TIRSPEEGGREVKNREELFE----ELSPLSDYTDIELSSRGLLVKLYNITKEAGKKLIIS 114

Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGL 202
            HN++ TP    +  ++      G  I K A  A    DVAR+  I+   +      I +
Sbjct: 115 YHNFELTPPNWIIREVLREGYRYG-GIPKIAVKANSYEDVARLLCISRQVE---GEKILI 170

Query: 203 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 248
            MG+ G ISR+    FG  +T+ +LE     APGQ  ++++++L  
Sbjct: 171 SMGDYGKISRLAGYVFGSVITYCSLEKA--FAPGQIPLEEMVELRK 214

>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1} Length = 231

 Score =  213 bits (543), Expect = 4e-66
 Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 13/237 (5%)

Query: 22  NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SPVPT 80
           N   I  P+M    D+    +  +     +L+E R D L           + ++ +    
Sbjct: 2   NAMRIVAPVMPRHFDEAQ-AIDISKYEDVNLIEWRADFLPKDEIVAVAPAIFEKFAGKEI 60

Query: 81  LFTYRPIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKV 139
           +FT R + EGG       E VD++  +      DYID E    +     +     +   +
Sbjct: 61  IFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYIDFEYFTHKSVFQEML----DFPNL 116

Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT--VHSQVSHV 197
           I+S HN++ TP  E+L    + +      +VK A       DV  +   T    +     
Sbjct: 117 ILSYHNFEETP--ENLMEAFSEMTKLAPRVVKIAVMPQSEQDVLDLMNYTRGFKTLNPEQ 174

Query: 198 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGP 254
               + MG+ G +SR      G   T+ +L++  VS PGQ T+ D+  +    +M  
Sbjct: 175 EFATISMGKLGRLSRFAGDVIGSSWTYVSLDH--VSGPGQVTLNDMKRIIEVLEMDI 229

>3js3_A 3-dehydroquinate dehydratase; AROD, covalent reaction intermediate, amino-acid biosynthesis, aromatic amino acid biosynthesis, lyase; HET: DHS; 2.20A {Clostridium difficile} Length = 258

 Score =  214 bits (545), Expect = 4e-66
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 11/235 (4%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPV 78
             ICVPI+G++   ++ +  +   +  D++E R+D  +N    + +K ++ E       +
Sbjct: 20  PKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDI 79

Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRGK-KPEK 136
           P LFT+R + EGG+     +    + +     G  D IDVEL +  E  D +      ++
Sbjct: 80  PLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKE 139

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT--VHSQV 194
            KVI+S+H++  TP  E++ + + R+Q  GAD+ K A    +  DV  + + T  +    
Sbjct: 140 VKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIY 199

Query: 195 SHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 249
           +  PII + M   G+ISR+    FG  LTFG  ++  VSAPGQ + K+L  + N 
Sbjct: 200 ADRPIITMSMSGMGVISRLCGEIFGSALTFGAAKS--VSAPGQISFKELNSVLNL 252

>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 3nnt_A* 3oex_A 3m7w_A 1gqn_A 1l9w_A* 1qfe_A* Length = 276

 Score =  212 bits (541), Expect = 3e-65
 Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 11/237 (4%)

Query: 21  KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE----- 75
           +    I V +MG+++  +  +      +  D++E R+D   N    E++           
Sbjct: 37  EGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREII 96

Query: 76  SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDS-IRGKK 133
           +  P LFT+R   EGG+      + +D+ R A++ G  D ID+EL    +   + +    
Sbjct: 97  TDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAH 156

Query: 134 PEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT--VH 191
                VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   T  + 
Sbjct: 157 QHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQ 216

Query: 192 SQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 248
            + +  PII + M + G+ISR+    FG   TFG ++    SAPG  ++ DL  +  
Sbjct: 217 ERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGAISVADLRTVLT 271

>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans} Length = 259

 Score =  210 bits (536), Expect = 8e-65
 Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 13/234 (5%)

Query: 19  MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SP 77
           M +    I VP+M +++++    +        D++E R D L   +       + ++ S 
Sbjct: 30  MGRGSMKIVVPVMPQNIEEAN-QLDLTRIDSTDIIEWRADYLVKDDILTVAPAIFEKFSG 88

Query: 78  VPTLFTYRPIWEGGQYDGDENERVDVLR-LAMELGADYIDVELQVAREFNDSIRGKKPEK 136
              +FT R   EGG       + + ++R +A     DYID E    R+  + +     + 
Sbjct: 89  HEVIFTLRTEKEGGNISLSNEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMY----DF 144

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT--VHSQV 194
             +I+S HN++ TP  E+L  + + + A    +VK A    +  DV  +   T    +  
Sbjct: 145 SNLILSYHNFEETP--ENLMEVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLN 202

Query: 195 SHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 248
            +   + + M + G ISR+     G   TF +LE    SAPGQ ++ D+  +  
Sbjct: 203 PNQEYVTMSMSKLGRISRLAADLIGSSWTFASLEQE--SAPGQISLADMRKIKE 254

>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus} Length = 196

 Score =  195 bits (497), Expect = 8e-60
 Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 34/224 (15%)

Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
           +   +      ++        A  AD+VE+R+D       R +            + T R
Sbjct: 3   LVATLSSPEELEL--------AEKADVVELRIDLFDFSGARVDK---------EKILTCR 45

Query: 86  PIWEGGQYDGDENERVDVLRLAME-LGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
            + +GG+++GDE ER++ ++ A + L  DY+D+E  +     D         C++I S H
Sbjct: 46  RVSDGGKFEGDERERIEKMKRAFDSLNPDYVDLESDLPDSAFDF-------NCRIIESYH 98

Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVM 204
           N+  TP   +L      ++    D+VK AT      DV  + +I  +       ++  +M
Sbjct: 99  NFIRTPDYSEL---KGIVEGRRGDLVKIATMGKSKRDVETIVRILTNYD----DVVAFLM 151

Query: 205 GERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 248
           GER   +R+L A  G    +  + +    APGQ ++ D  ++ +
Sbjct: 152 GERFSFTRVLAAYLGSPFIYCYVGS--PKAPGQISLDDAREIIS 193

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Length = 144

 Score = 64.0 bits (157), Expect = 2e-12
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 9/73 (12%)

Query: 374 VSGGVSSA---LAGKLF----VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 426
           VS  + S    +  K      +++G G     +A        +V +A R  D  R  AE 
Sbjct: 6   VS--IPSIVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK 63

Query: 427 VGGHALSLADLEN 439
                + + D+++
Sbjct: 64  YEYEYVLINDIDS 76

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 Length = 404

 Score = 59.9 bits (146), Expect = 7e-10
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 14/78 (17%)

Query: 374 VSGGVSSA---LAGKLF--------VVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRAR 421
           VS  + SA   LA +          +V+GAG  GK +A     +G   V++ANRTY+RA 
Sbjct: 148 VS--IGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAV 205

Query: 422 ELAETVGGHALSLADLEN 439
           ELA  +GG A+   +L +
Sbjct: 206 ELARDLGGEAVRFDELVD 223

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 49.1 bits (118), Expect = 8e-07
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           ++    +V GAG G G+AL  G   +G +V +  R Y R ++    +G   + + 
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIV 55

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 2e-06
 Identities = 81/527 (15%), Positives = 156/527 (29%), Gaps = 165/527 (31%)

Query: 3   SPNLLV----ASG-SKLVSGGMRKNPTLICVPIMGESVDKMV-VDMGKANASGADLVEI- 55
           + N+L+     SG + +             +        K+  +++   N S   ++E+ 
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD------FKIFWLNLKNCN-SPETVLEML 202

Query: 56  -----RLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110
                ++D   N+  R +  + IK          R + +   Y       + VL      
Sbjct: 203 QKLLYQID--PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY----ENCLLVLL----- 251

Query: 111 GADYIDV-ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADI 169
                +V   +    FN          CK+++++                        D 
Sbjct: 252 -----NVQNAKAWNAFN--------LSCKILLTTRF------------------KQVTDF 280

Query: 170 VKFATTALDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLEN 229
           +  AT              T H  + H   + L   E     + L  K+        L+ 
Sbjct: 281 LSAAT--------------TTHISLDHHS-MTLTPDE----VKSLLLKY--------LDC 313

Query: 230 GIVSAPGQ-----P--------TIKDLLDLY-NFRQMGPDTKVFGIIGKPVGHSKSPILY 275
                P +     P        +I+D L  + N++ +  D K+  II   +   + P  Y
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD-KLTTIIESSLNVLE-PAEY 371

Query: 276 NEAFKSVGFNGVF---VH----LL-----------VDDIAKFFQTYS--SNDFAGFSCTI 315
            + F  +    VF    H    LL           V  +      YS         + +I
Sbjct: 372 RKMFDRL---SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428

Query: 316 P--HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDG----KLFGYNTDYVGA-ISAIEDGL 368
           P  + E  VK  +E       +   N      SD      L  Y   ++G  +  IE   
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488

Query: 369 RGRLNVSGGVSSALAGKLFV---VIGAGGAGKALAYGAKAKGARVVIAN-----RTYDRA 420
           R            L   +F+    +      K + + + A  A   I N     + Y   
Sbjct: 489 R----------MTLFRMVFLDFRFLEQ----K-IRHDSTAWNASGSILNTLQQLKFYK-- 531

Query: 421 RELAETVGGHALSLADLENF--NPEDGMILANTTSI---GMQPKVDE 462
             + +    +   +  + +F    E+ +I +  T +    +  + + 
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEA 578

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 3e-06
 Identities = 46/327 (14%), Positives = 85/327 (25%), Gaps = 85/327 (25%)

Query: 240 IKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKF 299
            KD+ D+   + +    ++  II      S +  L+     S     V          KF
Sbjct: 35  CKDVQDM--PKSILSKEEIDHIIMSKDAVSGTLRLF-WTLLSKQEEMV---------QKF 82

Query: 300 FQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFG-YNTDYV 358
            +     ++  F  +    E              +   +    R  +D ++F  YN   +
Sbjct: 83  VEEVLRINY-KFLMSPIKTEQ-------RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134

Query: 359 GAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGK-ALAYGAKAKGARVVIANRTY 417
                +   L   L  +  V         ++ G  G+GK  +A         V     +Y
Sbjct: 135 QPYLKLRQALL-ELRPAKNV---------LIDGVLGSGKTWVA-------LDVC---LSY 174

Query: 418 DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE-------TPIPKHAL 470
               ++   +    L+L      +PE  + +       + P             +  H++
Sbjct: 175 KVQCKMDFKI--FWLNLK--NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 471 GH----------YA---LVFDAVYTPKI-------------TRLLREAEESGATIVSGLE 504
                       Y    LV   V   K              TR      +     +S   
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR-----FKQVTDFLSAAT 285

Query: 505 MFIGQAYEQYERFTGLPAPKELFQKIM 531
                        T     K L  K +
Sbjct: 286 TTHISLDHHSMTLT-PDEVKSLLLKYL 311

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH----ALSLAD 436
            A +  V+ GA  G G   A     +GA V++A R   +    A T+ G      L L D
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQD 73

Query: 437 LE 438
           L 
Sbjct: 74  LS 75

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 439
           + G    V+G G  G ++A    A GA+V +  R           +G     ++    
Sbjct: 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARES-DLLARIAEMGMEPFHISKAAQ 209

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 46.8 bits (112), Expect = 8e-06
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 380 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           S    K+ +V GAG G G+A+A      G  V +A R  D  +E A  +G  AL + 
Sbjct: 24  SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVP 80

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 44.8 bits (107), Expect = 3e-05
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 437
           LAG+  +V GAG G G+       A GARVV  +RT      L     G      DL
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDL 61

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 439
           + G    V+G G  G  +A    A GA V +  R+      + E +G       +L+ 
Sbjct: 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLVPFHTDELKE 211

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467

 Score = 45.2 bits (106), Expect = 4e-05
 Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 388 VVIGAGGAGKALA-YGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 446
           +++G+G   + +    A      V +A RT   A+ LA+  G  A+SL D+ + +  D +
Sbjct: 27  LLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISL-DVTDDSALDKV 85

Query: 447 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE-AEESGATIVSGLEM 505
           +  N   I + P      + K A+     V  + Y     R L     ++G T+++ + +
Sbjct: 86  LADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGL 145

Query: 506 FIG 508
             G
Sbjct: 146 DPG 148

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6 Length = 276

 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 388 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 447
             +G G   +      K +     I +R+ DRAR LAE  GG A +L           + 
Sbjct: 6   NFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKH--PELNGVVF 63

Query: 448 LA 449
           + 
Sbjct: 64  VI 65

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 45.3 bits (106), Expect = 4e-05
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 1/122 (0%)

Query: 388 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 447
           +++G+G   +         G +V +A RT + A++L+  V        D+ +    D  +
Sbjct: 7   LMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV 66

Query: 448 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE-AEESGATIVSGLEMF 506
             +   I + P      + K A+     V    Y       L + A+++G T+++ + + 
Sbjct: 67  AKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGLD 126

Query: 507 IG 508
            G
Sbjct: 127 PG 128

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 44.0 bits (105), Expect = 5e-05
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 437
            +G   +V GAG G G+       A GA+VV   RT      LA+   G      DL
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDL 61

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Length = 215

 Score = 43.4 bits (102), Expect = 6e-05
 Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 389 VIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 436
           ++G+G   ++LA      G +VV+ +R   R   L  +         +
Sbjct: 33  ILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-AAQVTFQEE 79

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 43.3 bits (103), Expect = 8e-05
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 376 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 434
           G  S +L GK+ ++ GAG G G+ +A      GA+VVI +R    A  +A  +G  AL++
Sbjct: 1   GPGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV 60

Query: 435 A 435
           A
Sbjct: 61  A 61

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 435
           + G++ VV GA  G G+ +A      GA V I  R  D  R +A+     GG  + + 
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV 60

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 43.3 bits (103), Expect = 9e-05
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L GK  ++ G+  G G+A A     +GA V IA+   +RAR+ A  +G  A ++ 
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQ 60

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           LAGK+ +V GAG G G A+A     +G  V+ A+   D A   A  +G  A +  
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACR 81

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 379 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL 434
           S         VIGAG   G  +A    A+G  V    R  ++   L   +   GG  ++ 
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR 61

Query: 435 A 435
           +
Sbjct: 62  S 62

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Length = 266

 Score = 42.8 bits (100), Expect = 1e-04
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 388 VVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGG-HALSLADL 437
           V+IGAG     LA     KG R+V + +RT + ARELA+ V   +   LA++
Sbjct: 14  VLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEV 65

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 375 SGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGH 430
            G +   L  K+ V+ G G   G  LA     +GA +V+A RT +R  ++A+ V   G  
Sbjct: 2   PGSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR 61

Query: 431 ALSLA 435
           ALS+ 
Sbjct: 62  ALSVG 66

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Length = 201

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 12/47 (25%), Positives = 16/47 (34%)

Query: 389 VIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           + G G  GK+L       G  VV  +R    +  L         S A
Sbjct: 24  IFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEA 70

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHALSLA 435
             GK+  + G G G GK +     + GA+ VIA+R  D     A +++   G    ++ 
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Length = 245

 Score = 42.4 bits (99), Expect = 2e-04
 Identities = 12/49 (24%), Positives = 16/49 (32%)

Query: 389 VIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 437
           V+G G  G+ +A      G  V I  R        AE     A   +  
Sbjct: 24  VLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQW 72

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHALSLA 435
           L GK  ++ GA  G G  +A    A GAR+V++ R         R L E  G    ++A
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 376 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 434
           G +++ L  K+ ++ GA  G G   +      GARVV+A+         A +VG  A+  
Sbjct: 3   GSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHH 62

Query: 435 A 435
            
Sbjct: 63  V 63

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)

Query: 379 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---------- 427
           +  LAG    + GA  G GKA+A  A   GA +VIA +T     +L  T+          
Sbjct: 40  TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV 99

Query: 428 GGHALSL-ADLENFNPEDGMI 447
           GG AL    D+ +       +
Sbjct: 100 GGKALPCIVDVRDEQQISAAV 120

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 41.7 bits (99), Expect = 3e-04
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG 429
           L G    V GAG G G  +     A GAR+++ +R        A+ +G 
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA 57

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 41.7 bits (99), Expect = 3e-04
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 379 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL 434
           S+A+  K+ ++ G   G GK +A     +GARVVI  RT ++  E    +    G  L++
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTV 60

Query: 435 A 435
            
Sbjct: 61  Q 61

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 376 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 431
            G  S   G+  VV G   G G A A     +GAR+V+++       +    +   G  A
Sbjct: 23  DGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDA 82

Query: 432 LSLA 435
             + 
Sbjct: 83  HGVV 86

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L  ++ +V G G G G+A A      GA VV+A+   D A  +A  +G  A  + 
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVR 79

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L G++ ++ G   G G+AL     A+GARV + +++ +R REL    GG+A+ + 
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVV 57

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 14/91 (15%)

Query: 351 FGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGAR 409
            G NT     ++ +                ++ GK  VV+   G  G   A     +GA 
Sbjct: 96  NGSNTTAAAGVALVVKAA----------GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAE 145

Query: 410 VVIANRTYDRARELAETV---GGHALSLADL 437
           VV+  R  D+A+  A++V       ++ A+ 
Sbjct: 146 VVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 382 LAGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 432
             G   +V G AGG G+A      A G  VVIA+   ++ + LA+ +G  A 
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAE 79

>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Length = 453

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 22/124 (17%)

Query: 388 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRA---RELAETVGGHALSLADLENFNPED 444
           ++IG G AG + AY    +G ++++     D     R   +  G  A+S A  +      
Sbjct: 10  LIIGGGFAGSSAAYQLSRRGLKILLV----DSKPWNRIGDKPCGD-AVSKAHFDKLGMPY 64

Query: 445 GM---ILANTTSIGMQPKVDETPIPKHALGHYAL---VFDAVYTPKITRLLREAEESGAT 498
                +      I +     +T    +  G + L   +++        R+L+EA++ G  
Sbjct: 65  PKGEELENKINGIKLYSPDMQTVWTVNGEG-FELNAPLYNQ-------RVLKEAQDRGVE 116

Query: 499 IVSG 502
           I   
Sbjct: 117 IWDL 120

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 41.3 bits (98), Expect = 4e-04
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)

Query: 382 LAGKLFVVIGAG-GAGKALAYG-AKAKGARVVIANRTYDR----ARELAETVGGHALSL- 434
           L G++ +V G   G G  +A G A+A G  VV+A+R  +     A++L E  G   ++  
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 435 ADLENFNPEDGMI 447
            D+ N+     ++
Sbjct: 78  CDVSNYEEVKKLL 90

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L+G+  +V G   G G A+A      GA V IA+     A+ +   +     ++ 
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVE 64

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 434
           L  K+ VV GA GG G  +     ++   V    R  +    LAE  G   +  
Sbjct: 3   LKKKIAVVTGATGGMGIEIVK-DLSRDHIVYALGRNPEHLAALAEIEGVEPIES 55

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 427
            AG+   V G   G G  L      +G +V IA+   D   +   T+
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATL 52

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL-AD 436
           L+GK  ++ GA  G GK +A      GA+V +A R  D  + +A+ +   GG AL +  D
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89

Query: 437 LENFNPEDGMI 447
           +   +   GM+
Sbjct: 90  VTQPDQVRGML 100

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 376 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 427
           G +  +   + ++V G G G GK +A G  A GA V+I  R  D+     + +
Sbjct: 3   GSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQEL 55

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 40.6 bits (96), Expect = 6e-04
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 6/77 (7%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL--A 435
           L  ++ +V GA  G G+  A      GA V++  R  ++ R++A  +    G        
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 436 DLENFNPEDGMILANTT 452
           DL     E+   LA   
Sbjct: 70  DLLTCTSENCQQLAQRI 86

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 9/63 (14%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAE--------TVGGHAL 432
           L G++ +V G   G GKA+       G+ VVIA+R  +R +  A+        T     +
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75

Query: 433 SLA 435
            + 
Sbjct: 76  PIQ 78

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 40.6 bits (96), Expect = 6e-04
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 432
           L+GK  ++ G   G G   A  A A GARVV+A+   +     A  +G  A 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAAR 54

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 382 LAGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 432
           + G + V+ G A G G A A     +GA  V+ +         A+ +G + +
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCV 61

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 40.6 bits (96), Expect = 7e-04
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L  K+ V+ GA  G G A A    A+GARV I  R  D        +GG A+ + 
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQ 81

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHALSLA 435
           L  K+  + G G G G  +A      G   VIA+R+  R    AR+LA   G   L L+
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLS 83

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 40.6 bits (96), Expect = 8e-04
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 435
           L GK+ +V GA  G G+A A     +GA+VV+  R  +   EL + +   GG A +LA
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA 63

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 380 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 435
           S+L+G++ VV GA  G G A+A    + GARVV+  R  ++ R +   +   GG A S A
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 40.2 bits (95), Expect = 8e-04
 Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-ADLEN 439
           L GK+ +V GA  G GKA+A     +GA+V+    +   A+ +++ +G +   +  ++ N
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 66

Query: 440 FNPEDGMI 447
               + ++
Sbjct: 67  PESIEAVL 74

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 40.3 bits (95), Expect = 9e-04
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAE 425
           L GK  +V GA  G G+ +AY     GA VV+  R+ +  +++  
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS 70

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	534
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	100.0
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	100.0
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	100.0
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	100.0
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	100.0
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	100.0
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	100.0
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	100.0
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	100.0
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	100.0
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	100.0
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	100.0
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	100.0
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	100.0
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	100.0
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	100.0
4h3d_A	258	3-dehydroquinate dehydratase; structural genomics,	100.0
2yr1_A	257	3-dehydroquinate dehydratase; amino acid biosynthe	100.0
3o1n_A	276	3-dehydroquinate dehydratase; structural genomics,	100.0
1sfl_A	238	3-dehydroquinate dehydratase; 3-dehydroquinase, en	100.0
2ocz_A	231	3-dehydroquinate dehydratase; structural genomics,	100.0
3l9c_A	259	3-dehydroquinate dehydratase; AROD, amino-acid bio	100.0
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	100.0
2egz_A	219	3-dehydroquinate dehydratase; aquifex aeolicus VF5	100.0
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	100.0
2ox1_A	196	3-dehydroquinate dehydratase; (beta-alpha)8 barrel	100.0
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	100.0
2dvm_A	439	Malic enzyme, 439AA long hypothetical malate oxido	100.0
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.68
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	99.4
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	99.35
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.32
3l07_A	285	Bifunctional protein fold; structural genomics, ID	99.31
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	99.29
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	99.29
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	99.15
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	99.13
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	99.04
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	98.98
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.97
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.93
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.88
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	98.81
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.81
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.8
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.68
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.68
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.68
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.55
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.53
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	98.51
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	98.45
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	98.44
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.41
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.37
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	98.34
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.33
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.32
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.3
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.29
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.28
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.28
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.26
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.24
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.24
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.23
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.22
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.22
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.21
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.21
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.21
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.21
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.19
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.19
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.19
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.19
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.19
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.18
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	98.18
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.18
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.18
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.18
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.17
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.17
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.17
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.17
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.16
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	98.16
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.16
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	98.16
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.16
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.16
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.15
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.15
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.14
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.14
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.14
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.14
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.14
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.14
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.13
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.13
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.13
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.13
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.13
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.13
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.12
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.11
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.11
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.1
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.1
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.1
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.09
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.09
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.09
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.09
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.09
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.09
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.08
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	98.08
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.08
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	98.08
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.07
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.07
1spx_A	278	Short-chain reductase family member (5L265); paral	98.07
3cxt_A	291	Dehydrogenase with different specificities; rossma	98.06
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.06
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	98.05
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.05
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	98.05
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.05
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.05
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.05
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.04
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.04
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.04
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.04
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.03
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	98.03
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.03
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	98.02
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	98.02
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.02
1xkq_A	280	Short-chain reductase family member (5D234); parra	98.02
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.02
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.02
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	98.02
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.01
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	98.01
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.01
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.01
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.01
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	98.0
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	98.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	98.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.99
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.99
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.98
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.98
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.98
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.98
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.98
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.98
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.97
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.97
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.97
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.96
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.96
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.96
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.96
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.96
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.96
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.95
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.95
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.95
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.94
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.94
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.93
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.93
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.92
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.91
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.91
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.91
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.91
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.9
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.9
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.89
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	97.89
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.89
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.88
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.87
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.87
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.87
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.86
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.86
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.86
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.85
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.85
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.85
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.85
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	97.85
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.84
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.83
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.83
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.82
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.81
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.81
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.8
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.79
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.79
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.79
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.78
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.78
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.77
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.77
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.77
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.76
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.76
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.75
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.75
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.74
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.74
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.74
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.74
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.73
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.73
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.73
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.73
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.72
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.72
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.71
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.71
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.71
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.71
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.7
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.7
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.69
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.69
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.69
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.68
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.68
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.68
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.66
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.66
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.66
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.65
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.65
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.64
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.64
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.64
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.63
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.63
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.62
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.62
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.62
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.61
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.6
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.6
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.6
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.59
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.59
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.59
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.59
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.59
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.57
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.57
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.57
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	97.57
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.55
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	97.54
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.54
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.52
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.52
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.52
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.51
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.51
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.5
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.5
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.47
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.47
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.44
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.44
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	97.43
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.43
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.42
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.41
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	97.41
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	97.4
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.39
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.39
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.39
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.39
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.37
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.36
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	97.36
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.36
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	97.35
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	97.33
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	97.32
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.32
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.31
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.31
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	97.31
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.31
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.28
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	97.27
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.26
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.25
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.25
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.24
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.24
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.24
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	97.24
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	97.24
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.24
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.23
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.23
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	97.23
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.23
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	97.23
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.22
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.21
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.21
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.21
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.21
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.21
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.19
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	97.19
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.18
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	97.17
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.17
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.17
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.17
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	97.15
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.14
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.14
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.13
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	97.13
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	97.13
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.12
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	97.12
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	97.11
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.11
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	97.1
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	97.1
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	97.08
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	97.08
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.07
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	97.07
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.07
3oet_A	381	Erythronate-4-phosphate dehydrogenase; structural	97.07
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	97.04
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	97.02
3aog_A	440	Glutamate dehydrogenase; NAD(H), oxidoreducta; HET	97.02
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.02
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	97.01
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	97.01
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	97.01
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	97.01
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	97.01
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.0
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.99
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.99
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	96.98
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.97
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	96.97
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.97
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.96
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.95
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.94
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	96.94
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.92
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.92
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.91
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.91
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.91
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.9
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.9
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.9
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	96.9
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.89
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.89
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	96.87
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	96.87
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.87
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.85
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	96.85
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.85
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	96.85
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	96.84
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.83
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.82
2o4c_A	380	Erythronate-4-phosphate dehydrogenase; erythronate	96.82
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	96.81
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.81
2v82_A	212	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; l	96.81
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.81
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.8
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.79
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.78
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.78
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	96.77
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.77
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	96.76
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.75
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.75
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.73
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.72
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.72
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.71
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.7
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	96.7
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.68
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.68
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.66
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.66
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	96.65
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.64
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.64
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.63
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.62
1ygy_A	529	PGDH, D-3-phosphoglycerate dehydrogenase; oxidored	96.62
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.61
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.6
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.6
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.59
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	96.58
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.58
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.57
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.57
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.57
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.57
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.57
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	96.57
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.56
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	96.54
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.54
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.53
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.52
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.52
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	96.52
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.51
4f6c_A	427	AUSA reductase domain protein; thioester reductase	96.51
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	96.51
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	96.5
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.49
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.48
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	96.48
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.48
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	96.46
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.46
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	96.45
1v9l_A	421	Glutamate dehydrogenase; protein-NAD complex, oxid	96.44
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.44
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.43
2tmg_A	415	Protein (glutamate dehydrogenase); metabolic role,	96.42
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	96.41
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.41
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.4
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.4
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.39
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.39
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	96.39
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.38
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.37
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.36
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.35
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.35
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	96.35
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.34
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.34
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	96.33
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.33
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.32
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.32
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.32
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.32
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.32
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	96.32
3k92_A	424	NAD-GDH, NAD-specific glutamate dehydrogenase; ROC	96.28
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.24
2yfq_A	421	Padgh, NAD-GDH, NAD-specific glutamate dehydrogena	96.24
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.23
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.23
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.23
4hv4_A	494	UDP-N-acetylmuramate--L-alanine ligase; MURC, yers	96.2
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.19
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.17
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.13
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	96.13
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	96.12
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.11
1gtm_A	419	Glutamate dehydrogenase; oxidoreductase, NAD, NADP	96.1
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	96.1

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=100.00  E-value=3.2e-113  Score=935.05  Aligned_cols=511  Identities=77%  Similarity=1.189  Sum_probs=452.4

Q ss_pred             CCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHH
Q 009464           21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENER  100 (534)
Q Consensus        21 ~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~  100 (534)
                      +++|+|||||+++|+++++.+++++.+.|+|+||||+|+|.+.++.++++.+++..++|+|||+|+++|||+|+.++++|
T Consensus         2 ~~~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRvD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~   81 (523)
T 2o7s_A            2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENER   81 (523)
T ss_dssp             CSCCEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEEGGGCSSCCHHHHHHHHHHHCSSCEEEECCBGGGTSSBCSCHHHH
T ss_pred             CCCCEEEEEecCCCHHHHHHHHHHhhhcCCCEEEEEEecccccChHHHHHHHHhcCCCcEEEEecccccCCCCCCCHHHH
Confidence            56899999999999999999999888899999999999999877666888888888999999999999999999999999


Q ss_pred             HHHHHHHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCCHH
Q 009464          101 VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDIT  180 (534)
Q Consensus       101 ~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~~~  180 (534)
                      +++|+.++++|+||||||++.+++.++.+...++.++|||+|||||++||+++++.++|++|.++||||+|||+||++.+
T Consensus        82 ~~ll~~~~~~~~~yiDvEl~~~~~~~~~~~~~~~~~~kiI~S~H~f~~tp~~~~~~~~~~~~~~~gaDivKia~~a~~~~  161 (523)
T 2o7s_A           82 RDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIA  161 (523)
T ss_dssp             HHHHHHHHHHTCSEEEEEHHHHHHHHHHTTTCCCTTCEEEEEEECSSCCCCHHHHHHHHHHHHTTTCSEEEEEEECSSGG
T ss_pred             HHHHHHHHHhCCCEEEEECCCchHHHHHHHHhccCCCEEEEEcccCCCCcCHHHHHHHHHHHHHhCCCEEEEEecCCCHH
Confidence            99999999999999999999998888887665556899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhccccCCCccEEE
Q 009464          181 DVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG  260 (534)
Q Consensus       181 D~~~l~~~~~~~~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~~~~~~~t~~~~  260 (534)
                      |+++|++++.+.+   .|+|+||||+.|++||+++++|||++||++++++.++||||+++++++++|++.+++++|++||
T Consensus       162 D~~~l~~~~~~~~---~p~i~~~MG~~G~~SRil~~~~gs~lt~~~l~~~~~sApGQ~~~~~l~~~~~~~~~~~~~~~~~  238 (523)
T 2o7s_A          162 DVARMFHITSKAQ---VPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYG  238 (523)
T ss_dssp             GHHHHHHHHHHCS---SCEEEEEESGGGTHHHHCTTTTTCSEEECBSSTTCCSSTTCCBHHHHHHTSCGGGCCTTCEEEE
T ss_pred             HHHHHHHHHhhcC---CCEEEEEcCCCCchhhhhhhhcCCceeecCCCccccCCCCCCcHHHHHHHHhhhhccccceEEE
Confidence            9999999988764   8999999999999999999999999999999865559999999999999999999999999999


Q ss_pred             ecCCCccccCCHHHHHHHHHHcCCCeEEEecccccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeE
Q 009464          261 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC  340 (534)
Q Consensus       261 liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNT  340 (534)
                      |||+||+||+||.|||++|+++|+|+.|.++++++++++++.++.++|.|+|||||||++|++++|++++.|+.+|||||
T Consensus       239 viG~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~~l~~~~~~~~~~~~~G~nVTiP~K~~i~~~ld~~~~~A~~iGAvNt  318 (523)
T 2o7s_A          239 IIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNT  318 (523)
T ss_dssp             EEESSCTTCCHHHHHHHHHHHTTCSEEEEEEECSCHHHHHHHTCSTTEEEEEECTTCHHHHHHHCSEECHHHHHHTCCSE
T ss_pred             EECCCccCCccHHHHHHHHHHcCCCcEEEeEEcchHHHHHHHHhcCCCCEEEECCCCHHHHHHHhcccCHHHHHhCCCeE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCC--CcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          341 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG--GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       341 i~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~--~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      |+++..+|+|+||||||.|++.+|+..+....+...  ....++++|+++|+|+||+|++++++|++.|++|+++||+.+
T Consensus       319 i~~~~~~gk~~g~nTD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~  398 (523)
T 2o7s_A          319 ILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYE  398 (523)
T ss_dssp             EEECTTTCCEEEECCHHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHH
T ss_pred             EEEecCCCeEEEEcCCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            998622689999999999999999865321000000  001246789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCe
Q 009464          419 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT  498 (534)
Q Consensus       419 ~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~  498 (534)
                      +++++++.++.....++++.++....+|+||||||+++.|..+..+++...+.....++|++|.|..|++++.|+++||.
T Consensus       399 ~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a~~~G~~  478 (523)
T 2o7s_A          399 RALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAI  478 (523)
T ss_dssp             HHHHHHHHTTC-CEETTTTTTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHHHTTTCE
T ss_pred             HHHHHHHHcCCceeeHHHhhhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHHHHCCCE
Confidence            99999998865544455544322235899999999998764444456655666678999999999999999999999999


Q ss_pred             EeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhC
Q 009464          499 IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY  534 (534)
Q Consensus       499 ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~~  534 (534)
                      +++|++|+++||+.||++|||.++|.+.|++++.+|
T Consensus       479 ~i~Gl~mlv~Qa~~~f~lwtg~~~~~~~~~~~~~~~  514 (523)
T 2o7s_A          479 TVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIMSKY  514 (523)
T ss_dssp             EECHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred             EECcHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence            999999999999999999999999999999988764

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=100.00  E-value=8.4e-68  Score=530.69  Aligned_cols=264  Identities=28%  Similarity=0.469  Sum_probs=241.9

Q ss_pred             cCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccC
Q 009464          252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  329 (534)
Q Consensus       252 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~  329 (534)
                      ++.+|++|||||+||+||+||.|||++|+++|+|+.|.++++  +++.++++.++.++|.|+|||||||+++++++|++|
T Consensus         1 ~s~~t~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~v~~l~~~~~~G~nVTiP~K~~v~~~ld~ls   80 (282)
T 3fbt_A            1 MSLNTSIYGLIGEKLGHSHSSYIHKLIFEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCGGLNVTIPYKVEVMKELYEIS   80 (282)
T ss_dssp             --CCCEEEEEEESSCCCCHHHHHHHHHHHHHTCCEEEEEEECCGGGHHHHHHHHHHTTCCEEEECTTCTTGGGGGCSEEC
T ss_pred             CCCcceEEEEECCCccccchHHHHHHHHHHcCCCcEEEEEECCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhcC
Confidence            357899999999999999999999999999999999999998  479999999988999999999999999999999999


Q ss_pred             HHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-
Q 009464          330 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  408 (534)
Q Consensus       330 ~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-  408 (534)
                      +.|+.+||||||+++  +|+|+||||||.||+++|++.           +.++++|+++|+|+||+||+++++|.+.|+ 
T Consensus        81 ~~A~~iGAVNTv~~~--~g~l~G~NTD~~G~~~~L~~~-----------~~~~~~k~vlvlGaGGaaraia~~L~~~G~~  147 (282)
T 3fbt_A           81 EKARKIGAVNTLKFS--REGISGFNTDYIGFGKMLSKF-----------RVEIKNNICVVLGSGGAARAVLQYLKDNFAK  147 (282)
T ss_dssp             HHHHHHTCCCEEEEC--SSCEEEECCHHHHHHHHHHHT-----------TCCCTTSEEEEECSSTTHHHHHHHHHHTTCS
T ss_pred             HHHHHcCCcceEEee--CCEEEeeCCcHHHHHHHHHHc-----------CCCccCCEEEEECCcHHHHHHHHHHHHcCCC
Confidence            999999999999987  899999999999999998752           246789999999999999999999999999 


Q ss_pred             eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHH
Q 009464          409 RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL  488 (534)
Q Consensus       409 ~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~l  488 (534)
                      +|+|+||+.++++++++.+.  ...++++.+  . .+|+||||||+||.|..+..|++.+.+++..+|+|++|+|.+|+|
T Consensus       148 ~v~v~nRt~~ka~~La~~~~--~~~~~~l~~--l-~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~l  222 (282)
T 3fbt_A          148 DIYVVTRNPEKTSEIYGEFK--VISYDELSN--L-KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLF  222 (282)
T ss_dssp             EEEEEESCHHHHHHHCTTSE--EEEHHHHTT--C-CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCHH
T ss_pred             EEEEEeCCHHHHHHHHHhcC--cccHHHHHh--c-cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCHH
Confidence            99999999999999987653  334555554  3 789999999999998766677888889999999999999999999


Q ss_pred             HHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          489 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       489 l~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +++|+++||++++|++||++||+.||++|||+++|.+.|++++.+
T Consensus       223 l~~A~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~~~~~~~  267 (282)
T 3fbt_A          223 LKYARESGVKAVNGLYMLVSQAAASEEIWNDISIDEIIVDEIFEV  267 (282)
T ss_dssp             HHHHHHTTCEEECSHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             HHHHHHCcCeEeCcHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998764

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=100.00  E-value=1.6e-67  Score=535.97  Aligned_cols=267  Identities=31%  Similarity=0.519  Sum_probs=236.5

Q ss_pred             cccCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccc
Q 009464          250 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  327 (534)
Q Consensus       250 ~~~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~  327 (534)
                      ..++++|++|||||+||+||+||.|||++|+++|+|++|.++++  ++++++++.++.++|+|+|||||||++|++++|+
T Consensus        25 ~~i~~~t~~~gviG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~  104 (312)
T 3t4e_A           25 MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPYTYMAFEVDNTTFASAIEGLKALKMRGTGVSMPNKQLACEYVDE  104 (312)
T ss_dssp             -----CCEEEEEEESCCTTCSHHHHHHHHHHHHTCSEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTSHHHHGGGCSE
T ss_pred             cccCCCceEEEEECCCccccccHHHHHHHHHHcCCCcEEEeEecCHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHhhh
Confidence            35788899999999999999999999999999999999999998  4899999999989999999999999999999999


Q ss_pred             cCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCC
Q 009464          328 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG  407 (534)
Q Consensus       328 ~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G  407 (534)
                      +|+.|+.+||||||+++  +|+|+||||||.||+++|++.           +.++++|+++|+|+||+||+++++|++.|
T Consensus       105 ls~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-----------~~~l~gk~~lVlGAGGaaraia~~L~~~G  171 (312)
T 3t4e_A          105 LTPAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-----------GFDMRGKTMVLLGAGGAATAIGAQAAIEG  171 (312)
T ss_dssp             ECHHHHHHTCCSEEEEE--TTEEEEECHHHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred             cCHHHHHhCceeEEEec--CCEEEEeCCcHHHHHHHHHhc-----------CCCcCCCEEEEECcCHHHHHHHHHHHHcC
Confidence            99999999999999987  899999999999999998752           24678999999999999999999999999


Q ss_pred             C-eEEEEeCC---HHHHHHHHHHHcCc------ccccccc---cccCCCCceEEEEcCCCCCCCCCCCCCC--CccccCC
Q 009464          408 A-RVVIANRT---YDRARELAETVGGH------ALSLADL---ENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGH  472 (534)
Q Consensus       408 ~-~v~i~~R~---~~~a~~la~~~~~~------~~~~~~~---~~~~~~~~divVn~t~~g~~~~~~~~~i--~~~~l~~  472 (534)
                      + +|+|+||+   .++++++++++...      ..+++++   .+ ....+|+||||||+||.|.. ..|+  +.+.+.+
T Consensus       172 ~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~-~l~~~DiIINaTp~Gm~~~~-~~~~~~~~~~l~~  249 (312)
T 3t4e_A          172 IKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE-ALASADILTNGTKVGMKPLE-NESLIGDVSLLRP  249 (312)
T ss_dssp             CSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH-HHHHCSEEEECSSTTSTTST-TCCSCCCGGGSCT
T ss_pred             CCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh-hccCceEEEECCcCCCCCCC-CCcccCCHHHcCC
Confidence            9 89999999   99999999887531      1233332   22 23458999999999998753 3444  5678888


Q ss_pred             CCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 009464          473 YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM  531 (534)
Q Consensus       473 ~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~  531 (534)
                      ..+|+|++|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|++++
T Consensus       250 ~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~af~lwtg~~~~~~~~~~~l  308 (312)
T 3t4e_A          250 ELLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFELWTGKAFPLDYVKQVM  308 (312)
T ss_dssp             TCEEEECCCSSSSCHHHHHHHHTTCEEECHHHHHHHHHHHHHHHHHSSCCCHHHHHHHT
T ss_pred             CCEEEEeccCCCCCHHHHHHHHCCCeEECcHHHHHHHHHHHHHHHhCCCCCHHHHHHHh
Confidence            89999999999999999999999999999999999999999999999999999999875

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=100.00  E-value=1.5e-67  Score=530.82  Aligned_cols=265  Identities=27%  Similarity=0.396  Sum_probs=239.6

Q ss_pred             CccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc-------ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccc
Q 009464          255 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  327 (534)
Q Consensus       255 ~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~-------~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~  327 (534)
                      +|++|||||+||+||+||.|||++|+++|+|+.|.++++       ++++++++.++.++|+|+|||||||+++++++|+
T Consensus         3 ~t~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~   82 (283)
T 3jyo_A            3 DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDE   82 (283)
T ss_dssp             CCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEETTSTTTTTCCHHHHHHHHHHTTCCEEEECTTCTTTTGGGSSE
T ss_pred             CceEEEEECCCccccccHHHHHHHHHHcCCCeEEEEEEccccCCCHHHHHHHHHHHhhCCCCEEEECcccHHHHHHHhhh
Confidence            589999999999999999999999999999999999942       5899999999989999999999999999999999


Q ss_pred             cCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCC
Q 009464          328 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG  407 (534)
Q Consensus       328 ~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G  407 (534)
                      +|+.|+.+||||||++++ +|+|+||||||.||+++|++.           +.++++|+++|+|+||+|++++++|++.|
T Consensus        83 l~~~A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~l~~~-----------~~~l~~k~vlVlGaGG~g~aia~~L~~~G  150 (283)
T 3jyo_A           83 VSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEG-----------LPNAKLDSVVQVGAGGVGNAVAYALVTHG  150 (283)
T ss_dssp             ECHHHHHHTCCCEEEECT-TSCEEEECHHHHHHHHHHHHH-----------CTTCCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred             CCHHHHHhCcceEEEECC-CCeEEEecCCHHHHHHHHHHh-----------CcCcCCCEEEEECCcHHHHHHHHHHHHCC
Confidence            999999999999999874 789999999999999998753           23578999999999999999999999999


Q ss_pred             C-eEEEEeCCHHHHHHHHHHHcCc-------ccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEE
Q 009464          408 A-RVVIANRTYDRARELAETVGGH-------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  479 (534)
Q Consensus       408 ~-~v~i~~R~~~~a~~la~~~~~~-------~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv  479 (534)
                      + +|+|+||+.++++++++.+...       ..+++++.+ ....+|+||||||+||.|. +..|++.+++++..+|+|+
T Consensus       151 ~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~-~l~~~DiVInaTp~Gm~~~-~~~pi~~~~l~~~~~v~Dl  228 (283)
T 3jyo_A          151 VQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIED-VIAAADGVVNATPMGMPAH-PGTAFDVSCLTKDHWVGDV  228 (283)
T ss_dssp             CSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHH-HHHHSSEEEECSSTTSTTS-CSCSSCGGGCCTTCEEEEC
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHH-HHhcCCEEEECCCCCCCCC-CCCCCCHHHhCCCCEEEEe
Confidence            9 8999999999999999887532       112234433 3346899999999999886 4567888889988999999


Q ss_pred             ecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          480 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       480 ~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|++++.+
T Consensus       229 vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~~~~~~~  282 (283)
T 3jyo_A          229 VYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRMRETFLS  282 (283)
T ss_dssp             CCSSSSCHHHHHHHHHTCCEECTHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHT
T ss_pred             cCCCCCCHHHHHHHHCcCeEeCcHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999998875

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=100.00  E-value=5.8e-67  Score=532.44  Aligned_cols=267  Identities=31%  Similarity=0.536  Sum_probs=241.6

Q ss_pred             ccCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccc--cHHHHHHHhcCCCCCEEEeccchHHHHhhccccc
Q 009464          251 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEV  328 (534)
Q Consensus       251 ~~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~  328 (534)
                      +++++|++|||||+||+||+||.|||++|+++|+|+.|.+|+++  +++++++.++.++|+|+|||||||+++++++|++
T Consensus        32 ~i~~~t~~~gviG~Pi~hS~SP~ihn~~f~~~Gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~l  111 (315)
T 3tnl_A           32 RITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKL  111 (315)
T ss_dssp             CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCCEEEEEEECCHHHHHHHHHHHHHTTCCEEEECTTSTTTGGGGCSEE
T ss_pred             hcCCcccEEEEECCCccccccHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHhc
Confidence            57888999999999999999999999999999999999999984  8999999999899999999999999999999999


Q ss_pred             CHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC
Q 009464          329 DTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA  408 (534)
Q Consensus       329 ~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~  408 (534)
                      |+.|+.+||||||+++  +|+|+||||||.||+++|++.           +.++++|+++|+|+||+|++++++|++.|+
T Consensus       112 s~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-----------~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga  178 (315)
T 3tnl_A          112 SPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA-----------GHDIIGKKMTICGAGGAATAICIQAALDGV  178 (315)
T ss_dssp             CHHHHHHTCCSEEEEE--TTEEEEECCHHHHHHHHHHHT-----------TCCCTTSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred             CHHHHHhCccceEEec--CCEEEEeCCCHHHHHHHHHHc-----------CCCccCCEEEEECCChHHHHHHHHHHHCCC
Confidence            9999999999999987  899999999999999998752           256789999999999999999999999999


Q ss_pred             -eEEEEeCC---HHHHHHHHHHHcC------ccccccc---ccccCCCCceEEEEcCCCCCCCCCCCCCC-CccccCCCC
Q 009464          409 -RVVIANRT---YDRARELAETVGG------HALSLAD---LENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYA  474 (534)
Q Consensus       409 -~v~i~~R~---~~~a~~la~~~~~------~~~~~~~---~~~~~~~~~divVn~t~~g~~~~~~~~~i-~~~~l~~~~  474 (534)
                       +|+|+||+   .++++++++++..      ...++++   +.+ ....+|+||||||+||.|..+..|+ +..++++..
T Consensus       179 ~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~-~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~  257 (315)
T 3tnl_A          179 KEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK-EIAESVIFTNATGVGMKPFEGETLLPSADMLRPEL  257 (315)
T ss_dssp             SEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH-HHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTC
T ss_pred             CEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh-hhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCC
Confidence             99999999   9999999988752      1223333   222 2346899999999999886555667 677888889


Q ss_pred             EEEEEecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 009464          475 LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM  531 (534)
Q Consensus       475 ~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~  531 (534)
                      +|+|++|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|++++
T Consensus       258 ~V~DlvY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~af~lwtG~~~p~~~~~~~l  314 (315)
T 3tnl_A          258 IVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL  314 (315)
T ss_dssp             EEEESCCSSSSCHHHHHHHHTTCEEECSHHHHHHHHHHHHHHHHSSCCCHHHHHHHH
T ss_pred             EEEEeccCCCCCHHHHHHHHCCCeEeCcHHHHHHHHHHHHHHHhCCCCCHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999876

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=100.00  E-value=1.7e-65  Score=512.70  Aligned_cols=259  Identities=25%  Similarity=0.369  Sum_probs=235.5

Q ss_pred             cEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHHH
Q 009464          257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS  334 (534)
Q Consensus       257 ~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~  334 (534)
                      .+|||||+||+||+||.|||++|+++|+|++|.++++  ++++++++.++.++|+|+|||||||+++++++|++|+.|+.
T Consensus         3 ~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~   82 (272)
T 3pwz_A            3 DRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNITAPFKLRAFELADRRSERAQL   82 (272)
T ss_dssp             EEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred             cEEEEECCCcCCcccHHHHHHHHHHcCCCcEEEEEEcCHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHHhhCCHHHHH
Confidence            4899999999999999999999999999999999998  47999999998899999999999999999999999999999


Q ss_pred             hcCeeEEEEeccCCeEEEEeccHHHHHHH-HHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEE
Q 009464          335 IGAVNCIIRRQSDGKLFGYNTDYVGAISA-IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVI  412 (534)
Q Consensus       335 iGAvNTi~~~~~~g~l~G~NTD~~G~~~~-l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i  412 (534)
                      +||||||+++  +|+|+||||||.||+++ |++.           +.++++|+++|+|+||+|++++++|++.|+ +|+|
T Consensus        83 iGAvNTv~~~--~g~l~G~NTD~~G~~~~lL~~~-----------~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i  149 (272)
T 3pwz_A           83 ARAANALKFE--DGRIVAENFDGIGLLRDIEENL-----------GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVI  149 (272)
T ss_dssp             HTCCSEEEEE--TTEEEEECCHHHHHHHHHHTTS-----------CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEE
T ss_pred             hCccceEEcc--CCeEEEecCCHHHHHHHHHHHc-----------CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEE
Confidence            9999999877  89999999999999999 7531           246789999999999999999999999997 9999


Q ss_pred             EeCCHHHHHHHHHHHcC---cccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHH
Q 009464          413 ANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL  489 (534)
Q Consensus       413 ~~R~~~~a~~la~~~~~---~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll  489 (534)
                      +||+.++++++++++..   ...+++++..   ..+|+||||||+||.+.  ..+++.+++++..+|+|++|+|.+|+|+
T Consensus       150 ~~R~~~~a~~la~~~~~~~~~~~~~~~l~~---~~~DivInaTp~gm~~~--~~~i~~~~l~~~~~V~DlvY~P~~T~ll  224 (272)
T 3pwz_A          150 ANRDMAKALALRNELDHSRLRISRYEALEG---QSFDIVVNATSASLTAD--LPPLPADVLGEAALAYELAYGKGLTPFL  224 (272)
T ss_dssp             ECSCHHHHHHHHHHHCCTTEEEECSGGGTT---CCCSEEEECSSGGGGTC--CCCCCGGGGTTCSEEEESSCSCCSCHHH
T ss_pred             EeCCHHHHHHHHHHhccCCeeEeeHHHhcc---cCCCEEEECCCCCCCCC--CCCCCHHHhCcCCEEEEeecCCCCCHHH
Confidence            99999999999999864   2334444432   56899999999999754  2357778899999999999999999999


Q ss_pred             HHHHHCCCe-EeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          490 REAEESGAT-IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       490 ~~A~~~G~~-ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      ++|+++||+ +++|++||++||+.||++|||+++|.+.|++.+++
T Consensus       225 ~~A~~~G~~~~~~Gl~ML~~Qa~~~f~lwtg~~~~~~~~~~~l~~  269 (272)
T 3pwz_A          225 RLAREQGQARLADGVGMLVEQAAEAFAWWRGVRPDTRAVINQLTI  269 (272)
T ss_dssp             HHHHHHSCCEEECTHHHHHHHHHHHHHHHHSCCCCCHHHHHHHCC
T ss_pred             HHHHHCCCCEEECCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            999999998 99999999999999999999999999999988764

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=100.00  E-value=2.9e-65  Score=513.36  Aligned_cols=264  Identities=25%  Similarity=0.411  Sum_probs=233.3

Q ss_pred             cCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccC
Q 009464          252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  329 (534)
Q Consensus       252 ~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~  329 (534)
                      ++.++++|||||+||+||+||.|||++|+++|+|++|.++++  ++++++++.++.++|+|+|||||||+++++++|++|
T Consensus         4 ~~~~m~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~ld~l~   83 (281)
T 3o8q_A            4 MASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLT   83 (281)
T ss_dssp             ----CEEEEEECCSSSCCCHHHHHHHHHHHTTCCEEEEEECCCTTCHHHHHHHHHHTTCCEEEECTTSHHHHHHHCSEEC
T ss_pred             ccccccEEEEECCCCCccCcHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHHhCCCCEEEECCccHHHHHHHHhhcC
Confidence            456688999999999999999999999999999999999998  489999999988999999999999999999999999


Q ss_pred             HHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-
Q 009464          330 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  408 (534)
Q Consensus       330 ~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-  408 (534)
                      +.|+.+||||||++.+ +|+|+||||||.||+++|++.           +.++++|+++|+|+||+|++++++|++.|+ 
T Consensus        84 ~~A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~L~~~-----------~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~  151 (281)
T 3o8q_A           84 ERARLAGAVNTLKKLD-DGEILGDNTDGEGLVQDLLAQ-----------QVLLKGATILLIGAGGAARGVLKPLLDQQPA  151 (281)
T ss_dssp             HHHHHHTCCSEEEECT-TSCEEEECCHHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHHHHHHHHTTCCS
T ss_pred             HHHHhhCeeeEEEEcC-CCcEEEEecHHHHHHHHHHHh-----------CCCccCCEEEEECchHHHHHHHHHHHhcCCC
Confidence            9999999999999753 899999999999999998652           246789999999999999999999999998 


Q ss_pred             eEEEEeCCHHHHHHHHHHHcC----cccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC
Q 009464          409 RVVIANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK  484 (534)
Q Consensus       409 ~v~i~~R~~~~a~~la~~~~~----~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~  484 (534)
                      +|+|+||+.++++++++.++.    ...+++++.    ..+|+||||||+||.+.  ..+++.++++++.+|+|++|+|.
T Consensus       152 ~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~----~~aDiIInaTp~gm~~~--~~~l~~~~l~~~~~V~DlvY~P~  225 (281)
T 3o8q_A          152 SITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK----QSYDVIINSTSASLDGE--LPAIDPVIFSSRSVCYDMMYGKG  225 (281)
T ss_dssp             EEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC----SCEEEEEECSCCCC------CSCCGGGEEEEEEEEESCCCSS
T ss_pred             eEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhc----CCCCEEEEcCcCCCCCC--CCCCCHHHhCcCCEEEEecCCCc
Confidence            999999999999999998863    223333332    56899999999999753  23567778888889999999999


Q ss_pred             hhHHHHHHHHCCCe-EeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          485 ITRLLREAEESGAT-IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       485 ~T~ll~~A~~~G~~-ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +|+|+++|+++||+ +++|++||++||+.||++|||+++|.+.|++.+++
T Consensus       226 ~T~ll~~A~~~G~~~~~~Gl~Mlv~Qa~~~f~lwtg~~~~~~~~~~~l~~  275 (281)
T 3o8q_A          226 YTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILRELRK  275 (281)
T ss_dssp             CCHHHHHHHHTTCSEEECTHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred             cCHHHHHHHHCCCCEEECcHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            99999999999998 99999999999999999999999999998887764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=100.00  E-value=7.2e-66  Score=516.15  Aligned_cols=259  Identities=32%  Similarity=0.537  Sum_probs=228.3

Q ss_pred             EEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHHHh
Q 009464          258 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSI  335 (534)
Q Consensus       258 ~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~i  335 (534)
                      .|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++.++|+|+|||||||+++++++|++|+.|+.+
T Consensus         2 ~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~i   81 (277)
T 3don_A            2 KFAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKSV   81 (277)
T ss_dssp             EEEEEESSCTTCCHHHHHHHHHHHTTCCCEEEEEECCGGGGGGHHHHHHHTTCSEEEECTTCTTTTGGGCSEECHHHHHH
T ss_pred             EEEEECCCccccccHHHHHHHHHHcCcCcEEEEEEcCHHHHHHHHHHHhhCCCCEEEECcCCHHHHHHHhhhCCHHHHHh
Confidence            499999999999999999999999999999999998  479999999998999999999999999999999999999999


Q ss_pred             cCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEe
Q 009464          336 GAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIAN  414 (534)
Q Consensus       336 GAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~  414 (534)
                      ||||||+++  +|+|+||||||.||+++|++.           +.++++|+++|+|+||+|++++++|.+.|+ +|+|+|
T Consensus        82 GAVNTv~~~--~g~l~G~NTD~~G~~~~L~~~-----------~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~  148 (277)
T 3don_A           82 GAVNTVLVK--DGKWIGYNTDGIGYVNGLKQI-----------YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVAN  148 (277)
T ss_dssp             TCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-----------STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEEC
T ss_pred             CceeEEEec--CCEEEEECChHHHHHHHHHHh-----------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            999999987  899999999999999998753           245788999999999999999999999999 999999


Q ss_pred             CCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHH
Q 009464          415 RTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE  494 (534)
Q Consensus       415 R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~  494 (534)
                      |+.++++++++.+  ....++++.+ ....+|+||||||+||.|... .+++.+.+++..+|+|++|+|..|+|+++|++
T Consensus       149 R~~~~a~~la~~~--~~~~~~~~~~-~~~~aDiVInaTp~Gm~~~~~-~~l~~~~l~~~~~V~D~vY~P~~T~ll~~A~~  224 (277)
T 3don_A          149 RTMSRFNNWSLNI--NKINLSHAES-HLDEFDIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIEAEQ  224 (277)
T ss_dssp             SCGGGGTTCCSCC--EEECHHHHHH-TGGGCSEEEECCC-------C-CSSCCTTCCSSCEEEESCCSSSSCHHHHHHHH
T ss_pred             CCHHHHHHHHHhc--ccccHhhHHH-HhcCCCEEEECccCCCCCCCc-CCCCHHHcCCCCEEEEecCCCCCCHHHHHHHH
Confidence            9999988876532  2234455544 345789999999999987533 34677788888999999999999999999999


Q ss_pred             CCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          495 SGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       495 ~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +||++++|++||++||+.||++|||+++|.+.|++++++
T Consensus       225 ~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~~~~l~~  263 (277)
T 3don_A          225 RGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQ  263 (277)
T ss_dssp             TTCCEECTHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred             CcCEEeCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999997764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=100.00  E-value=1.9e-65  Score=509.44  Aligned_cols=251  Identities=28%  Similarity=0.447  Sum_probs=227.7

Q ss_pred             CccEEEecCCCccccCCHHHHHHHH----HHcCCCeEEEecccccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCH
Q 009464          255 DTKVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT  330 (534)
Q Consensus       255 ~t~~~~liG~pi~hS~SP~~hn~~f----~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~  330 (534)
                      +|++|||||+||+||+||.|||++|    +++|+|+.|.++++++++++++.++.++|.|+|||||||+++++++|++|+
T Consensus         2 k~~~~~viG~Pi~hS~SP~~hn~~f~~~~~~~gl~~~Y~~~~v~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~   81 (269)
T 3phh_A            2 KLKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKG   81 (269)
T ss_dssp             CEEEEEEEESSCTTCCHHHHHHHHHHHHHHHHSSEEEEEEEECCSSSCHHHHHHHTTEEEEEECTTCHHHHHHHSSEECG
T ss_pred             CceEEEEECCCccccccHHHHHHHHHHHHHHcCCCCEEeeEEhhhHHHHHHHHhhCCCCEEEEccccHHHHHHHHhhcCH
Confidence            5789999999999999999999999    999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeE
Q 009464          331 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARV  410 (534)
Q Consensus       331 ~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v  410 (534)
                      .|+.+||||||+++  +|+|+||||||.||+++|++.               .+|+++|+|+||+||+++++|.+.|.+|
T Consensus        82 ~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~---------------~~k~vlvlGaGGaaraia~~L~~~G~~v  144 (269)
T 3phh_A           82 IALECGAVNTLVLE--NDELVGYNTDALGFYLSLKQK---------------NYQNALILGAGGSAKALACELKKQGLQV  144 (269)
T ss_dssp             GGGGTTCCCEEEEE--TTEEEEECCHHHHHHHHCC------------------CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred             HHHHhCceeEEEee--CCEEEEecChHHHHHHHHHHc---------------CCCEEEEECCCHHHHHHHHHHHHCCCEE
Confidence            99999999999987  899999999999999996431               1789999999999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCcc----ccCCCCEEEEEecCCChh
Q 009464          411 VIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKH----ALGHYALVFDAVYTPKIT  486 (534)
Q Consensus       411 ~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~----~l~~~~~v~Dv~y~p~~T  486 (534)
                      +|+||+.+++++++ +++....+++++.     .+|+||||||+||.+.   .+++.+    .+++..+|+|++|+| .|
T Consensus       145 ~V~nRt~~ka~~la-~~~~~~~~~~~l~-----~~DiVInaTp~Gm~~~---~~l~~~~l~~~l~~~~~v~D~vY~P-~T  214 (269)
T 3phh_A          145 SVLNRSSRGLDFFQ-RLGCDCFMEPPKS-----AFDLIINATSASLHNE---LPLNKEVLKGYFKEGKLAYDLAYGF-LT  214 (269)
T ss_dssp             EEECSSCTTHHHHH-HHTCEEESSCCSS-----CCSEEEECCTTCCCCS---CSSCHHHHHHHHHHCSEEEESCCSS-CC
T ss_pred             EEEeCCHHHHHHHH-HCCCeEecHHHhc-----cCCEEEEcccCCCCCC---CCCChHHHHhhCCCCCEEEEeCCCC-ch
Confidence            99999999999999 8775444444332     6899999999999864   456666    667788999999999 99


Q ss_pred             HHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 009464          487 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMA  532 (534)
Q Consensus       487 ~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~  532 (534)
                      +|+++|+++||++++|++||++||+.||++|||+++|.+.+.+.++
T Consensus       215 ~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lw~g~~~~~~~~~~~~~  260 (269)
T 3phh_A          215 PFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIPYSKAFEVMR  260 (269)
T ss_dssp             HHHHHHHHTTCCEECSHHHHHHHHHHHHHHHTTTSSCHHHHHHHHH
T ss_pred             HHHHHHHHCcCEEECCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999996555443

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=100.00  E-value=1.4e-62  Score=491.66  Aligned_cols=260  Identities=27%  Similarity=0.419  Sum_probs=233.3

Q ss_pred             cCCCccE-EEecCCCccccCCHHHHHHHHHHcCCCeEEEecccccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCH
Q 009464          252 MGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT  330 (534)
Q Consensus       252 ~~~~t~~-~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~  330 (534)
                      ++++|++ |||||+|  ||+||.|||++|+++|+|+.|.+++.++++++++.++..+|.|+|||||||++|++++|++|+
T Consensus         2 i~~~t~~~~~viG~P--hS~SP~~hn~~~~~~gl~~~Y~~~~~~~l~~~~~~~~~~~~~G~nVTiP~K~~i~~~~d~~~~   79 (271)
T 1npy_A            2 INKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRGCAVSMPFKETCMPFLDEIHP   79 (271)
T ss_dssp             CCTTCEEEEEECSSC--CSHHHHHHHHHHHHHTCCEEEEEECCSCHHHHHHHHHHHTCCEEEECTTCTTTTGGGCSEECH
T ss_pred             cCCCceEEEEEECCC--CcccHHHHHHHHHHcCCCcEEEeechhhHHHHHHHhccCCCCeEEECcCCHHHHHHHHHHhhH
Confidence            6788999 9999999  999999999999999999999999988999999999888999999999999999999999999


Q ss_pred             HHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-e
Q 009464          331 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-R  409 (534)
Q Consensus       331 ~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~  409 (534)
                      .|+.+||||||+++  +|+|+||||||.||..+|++.           +.. .+++++|+|+||+||+++++|.+.|+ +
T Consensus        80 ~A~~iGAvNTi~~~--~g~l~g~NTD~~G~~~~l~~~-----------~~~-~~~~vlvlGaGgaarav~~~L~~~G~~~  145 (271)
T 1npy_A           80 SAQAIESVNTIVND--NGFLRAYNTDYIAIVKLIEKY-----------HLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEK  145 (271)
T ss_dssp             HHHTTTCCCEEEEE--TTEEEEECHHHHHHHHHHHHT-----------TCC-TTSCEEEECSSTTHHHHHHHHHHTTCCC
T ss_pred             HHHHhCCCCceECc--CCEEEeecCCHHHHHHHHHHh-----------CCC-CCCEEEEECCcHHHHHHHHHHHHCCCCE
Confidence            99999999999987  899999999999999998652           122 46899999999999999999999998 8


Q ss_pred             EEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC--CCCCCCCccccCCCCEEEEEecCCChhH
Q 009464          410 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK--VDETPIPKHALGHYALVFDAVYTPKITR  487 (534)
Q Consensus       410 v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~--~~~~~i~~~~l~~~~~v~Dv~y~p~~T~  487 (534)
                      |+|+||+.++++++++.++..   +.+  ......+|+||||||+||.|.  .+..|++...+.+..+|+|++|+|.+|+
T Consensus       146 i~v~nRt~~ka~~la~~~~~~---~~~--~~~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T~  220 (271)
T 1npy_A          146 LKIYARNVKTGQYLAALYGYA---YIN--SLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETP  220 (271)
T ss_dssp             EEEECSCHHHHHHHHHHHTCE---EES--CCTTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCH
T ss_pred             EEEEeCCHHHHHHHHHHcCCc---cch--hhhcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCCH
Confidence            999999999999999988642   221  111246899999999999764  2334566667777789999999999999


Q ss_pred             HHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 009464          488 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMA  532 (534)
Q Consensus       488 ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~  532 (534)
                      |+++|+++||++++|++||++||+.||++|||+++|.+.|++++.
T Consensus       221 ll~~A~~~G~~~i~Gl~MLv~Qa~~~f~lw~g~~~~~~~~~~~~~  265 (271)
T 1npy_A          221 FIRYAQARGKQTISGAAVIVLQAVEQFELYTHQRPSDELIAEAAA  265 (271)
T ss_dssp             HHHHHHHTTCEEECHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred             HHHHHHHCCCEEECCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999999998764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=100.00  E-value=3.3e-60  Score=481.57  Aligned_cols=275  Identities=35%  Similarity=0.543  Sum_probs=242.6

Q ss_pred             hhhccccCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhh
Q 009464          246 LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVK  323 (534)
Q Consensus       246 ~~~~~~~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~  323 (534)
                      -|++.+++..|++||+||+|++||+||.|||++|+++|+|+.|.++++  +++.++++.++..++.|+|||||||++|++
T Consensus        13 ~~~~~~~~~~t~~~~viG~pi~hS~Sp~~hn~~~~~~Gl~~~Y~~~~~~~~~l~~~v~~l~~~~~~G~nVTiP~K~~i~~   92 (297)
T 2egg_A           13 GENLYFQGHMEKVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRALGIAGVNVTIPHKLAVIP   92 (297)
T ss_dssp             -------CCCCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCTTCHHHHHHHHHHHTCCEEEECTTCTTTTGG
T ss_pred             cccceecCCceeEEEEECCCcccccCHHHHHHHHHHcCcCcEEEEEEcCHHHHHHHHHHHhhCCCCeEEECCcCHHHHHH
Confidence            477889999999999999999999999999999999999999999998  589999999988899999999999999999


Q ss_pred             cccccCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHH
Q 009464          324 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGA  403 (534)
Q Consensus       324 ~ld~~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L  403 (534)
                      ++|++++.|+.+||||||+++  +|+|+|+||||.||..+|+.. .         ..++.+++++|+|+||+|++++++|
T Consensus        93 ~ld~~~~~A~~iGavNti~~~--~g~l~g~nTd~~G~~~~l~~~-~---------~~~l~~~~vlVlGaGg~g~aia~~L  160 (297)
T 2egg_A           93 FLDEVDEHARRIGAVNTIINN--DGRLVGYNTDGLGYVQALEEE-M---------NITLDGKRILVIGAGGGARGIYFSL  160 (297)
T ss_dssp             GCSEECHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-T---------TCCCTTCEEEEECCSHHHHHHHHHH
T ss_pred             HHHHHhHHHHHhCCCCeEECc--CCeEeeccCCHHHHHHHHHHh-C---------CCCCCCCEEEEECcHHHHHHHHHHH
Confidence            999999999999999999987  899999999999999998752 1         0356789999999999999999999


Q ss_pred             HHCCC-eEEEEeCCHHHHHHHHHHHcC---cccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEE
Q 009464          404 KAKGA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  479 (534)
Q Consensus       404 ~~~G~-~v~i~~R~~~~a~~la~~~~~---~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv  479 (534)
                      .+.|+ +|+|+||+.++++++++.++.   ...+++++.+ ....+|+||||||.+|.|..+..+++...++++.+|+|+
T Consensus       161 ~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~-~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~  239 (297)
T 2egg_A          161 LSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAET-RLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDI  239 (297)
T ss_dssp             HTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHH-TGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEEC
T ss_pred             HHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHh-hhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEc
Confidence            99999 999999999999999998864   3333444444 456789999999999987544445666778888999999


Q ss_pred             ecCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          480 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       480 ~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +|+|..|+|+++|+++||++++|++||++|++.||++|||.++|.+.|++.+++
T Consensus       240 ~y~P~~T~ll~~A~~~G~~~v~Gl~MLv~Qa~~af~~w~g~~~~~~~~~~~~~~  293 (297)
T 2egg_A          240 IYNPLETKWLKEAKARGARVQNGVGMLVYQGALAFEKWTGQWPDVNRMKQLVIE  293 (297)
T ss_dssp             CCSSSSCHHHHHHHHTTCEEECSHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHCcCEEECCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999997764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=100.00  E-value=3.3e-59  Score=468.91  Aligned_cols=263  Identities=23%  Similarity=0.348  Sum_probs=227.7

Q ss_pred             cEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHHH
Q 009464          257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS  334 (534)
Q Consensus       257 ~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~  334 (534)
                      ++|||||+||+||+||.|||++|+++|+|+.|.++++  +++.++++.++.++|.|+|||||||+++++++|++|+.|+.
T Consensus         2 ~~~~viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~~~~~~l~~~i~~~~~~~~~G~nVT~P~K~~v~~~ld~~~~~A~~   81 (272)
T 1p77_A            2 DLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKL   81 (272)
T ss_dssp             EEEEEEESSCTTCCHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred             cEEEEECCCcccccCHHHHHHHHHHCCcCeEEEEEEcCHHHHHHHHHHHHhCCCCEEEECcCCHHHHHHHHhhcCHHHHH
Confidence            6899999999999999999999999999999999998  58999999998899999999999999999999999999999


Q ss_pred             hcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEe
Q 009464          335 IGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN  414 (534)
Q Consensus       335 iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~  414 (534)
                      +||||||+++. +|+|+||||||.||+.+|++.           +.++++|+++|+|+||+|++++++|++.|++|+|+|
T Consensus        82 igavNti~~~~-~g~l~g~NTD~~G~~~~L~~~-----------~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~  149 (272)
T 1p77_A           82 AEACNTLKKLD-DGKLYADNTDGIGLVTDLQRL-----------NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLAN  149 (272)
T ss_dssp             HTCCSEEEECT-TSCEEEECCHHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEE
T ss_pred             hCCceEEEEcc-CCEEEEecCCHHHHHHHHHHh-----------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEE
Confidence            99999999842 899999999999999998752           245778999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHcCc-ccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCCh-hHHHHHH
Q 009464          415 RTYDRARELAETVGGH-ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-TRLLREA  492 (534)
Q Consensus       415 R~~~~a~~la~~~~~~-~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~-T~ll~~A  492 (534)
                      |+.++++++++.++.. .....++++.....+|+||||||.++.+..  .+++.+.+.++.+++|++|+|.. |+|+++|
T Consensus       150 R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~~--~~i~~~~l~~~~~v~D~~y~p~~~t~ll~~a  227 (272)
T 1p77_A          150 RTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGGT--ASVDAEILKLGSAFYDMQYAKGTDTPFIALC  227 (272)
T ss_dssp             SSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC---------CCCHHHHHHCSCEEESCCCTTSCCHHHHHH
T ss_pred             CCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCCCC--CCCCHHHcCCCCEEEEeeCCCCcCCHHHHHH
Confidence            9999999999887531 011122222101378999999999987632  24555667777899999999998 9999999


Q ss_pred             HHCCCe-EeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          493 EESGAT-IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       493 ~~~G~~-ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +++||+ +++|++||++|++.+|++|+|.++|.+.|++.+++
T Consensus       228 ~~~G~~~~v~G~~mLv~Qa~~af~~w~g~~~~~~~~~~~l~~  269 (272)
T 1p77_A          228 KSLGLTNVSDGFGMLVAQAAHSFHLWRGVMPDFVSVYEQLKK  269 (272)
T ss_dssp             HHTTCCCEECSHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred             HHcCCCEeeCCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            999999 99999999999999999999999999999988765

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=100.00  E-value=3.2e-58  Score=461.53  Aligned_cols=262  Identities=28%  Similarity=0.420  Sum_probs=232.3

Q ss_pred             cEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHHH
Q 009464          257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS  334 (534)
Q Consensus       257 ~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~  334 (534)
                      ++|||||+||+||+||.|||++|+++|+|+.|.++++  +++.++++.++.++|.|+|||||||+++++++|++|+.|+.
T Consensus         2 ~~~~viG~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nVT~P~K~~~~~~ld~~~~~A~~   81 (271)
T 1nyt_A            2 ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAAL   81 (271)
T ss_dssp             CSEEEEESSCTTCSHHHHHHHHHHHHTCCCCEEEEECCTTCHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred             CEEEEECCCcccccCHHHHHHHHHHCCCCcEEEEEEcCHHHHHHHHHHHHhCCCCeEEEccCCHHHHHHHHhhcCHHHHH
Confidence            5799999999999999999999999999999999998  58999999998899999999999999999999999999999


Q ss_pred             hcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEe
Q 009464          335 IGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN  414 (534)
Q Consensus       335 iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~  414 (534)
                      +||||||+++. +|+|+||||||.||+.+|++.           +.++++|+++|+|+||+|++++++|++.|++|+++|
T Consensus        82 igavNti~~~~-~g~l~G~ntD~~G~~~~L~~~-----------~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~  149 (271)
T 1nyt_A           82 AGAVNTLMRLE-DGRLLGDNTDGVGLLSDLERL-----------SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITN  149 (271)
T ss_dssp             HTCCSEEEECT-TSCEEEECCHHHHHHHHHHHH-----------TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             hCCceEEEEcC-CCeEEEeCCCHHHHHHHHHhc-----------CcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEE
Confidence            99999999842 899999999999999998752           245778999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHcCc-ccccccccccCC-CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHH
Q 009464          415 RTYDRARELAETVGGH-ALSLADLENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA  492 (534)
Q Consensus       415 R~~~~a~~la~~~~~~-~~~~~~~~~~~~-~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A  492 (534)
                      |+.++++++++.++.. .....+..+ .. ..+|+||||||.++.+..  .+++.+.+.++.+++|++|+|..|+|++.|
T Consensus       150 R~~~~~~~la~~~~~~~~~~~~~~~~-~~~~~~DivVn~t~~~~~~~~--~~i~~~~l~~~~~v~D~~y~p~~t~~~~~a  226 (271)
T 1nyt_A          150 RTVSRAEELAKLFAHTGSIQALSMDE-LEGHEFDLIINATSSGISGDI--PAIPSSLIHPGIYCYDMFYQKGKTPFLAWC  226 (271)
T ss_dssp             SSHHHHHHHHHHTGGGSSEEECCSGG-GTTCCCSEEEECCSCGGGTCC--CCCCGGGCCTTCEEEESCCCSSCCHHHHHH
T ss_pred             CCHHHHHHHHHHhhccCCeeEecHHH-hccCCCCEEEECCCCCCCCCC--CCCCHHHcCCCCEEEEeccCCcCCHHHHHH
Confidence            9999999999887531 111112222 11 478999999999987532  346667788889999999999999999999


Q ss_pred             HHCCCe-EeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          493 EESGAT-IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       493 ~~~G~~-ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +++||+ +++|++||++|++.+|++|+|.++|.+.|++.+++
T Consensus       227 ~~~G~~~~~~G~~mLv~Q~~~af~~w~g~~~~~~~~~~~l~~  268 (271)
T 1nyt_A          227 EQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQE  268 (271)
T ss_dssp             HHTTCCEEECTHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred             HHcCCCeecCCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            999999 99999999999999999999999999999988765

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=100.00  E-value=1e-59  Score=466.44  Aligned_cols=245  Identities=36%  Similarity=0.565  Sum_probs=218.4

Q ss_pred             EEEecCCCccccCCHHHHHHHHHHcCCCeEEEecccc--cHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHHHh
Q 009464          258 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSI  335 (534)
Q Consensus       258 ~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~--~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~i  335 (534)
                      +|||||+||+||+||.|||++|+++|+|++|.+++++  +++++++.++ ++|+|+|||||||+++++++|+ |+.|+.+
T Consensus         2 ~~~viG~pi~hS~SP~~hn~~~~~~gl~~~Y~~~~v~~~~l~~~~~~~~-~~~~G~nVT~P~K~~v~~~~d~-~~~A~~i   79 (253)
T 3u62_A            2 KFCIIGYPVRHSISPRLYNEYFKRAGMNHSYGMEEIPPESFDTEIRRIL-EEYDGFNATIPHKERVMRYVEP-SEDAQRI   79 (253)
T ss_dssp             EEEEEESSCTTCSHHHHHHHHHHHHTCCCEEEEEECCGGGHHHHHHHHH-HHCSEEEECTTCTTGGGGGSEE-CHHHHHH
T ss_pred             EEEEECCCccccccHHHHHHHHHHcCCCCEEEeEecCHHHHHHHHHHHh-hCCCceeecCChHHHHHHHhCC-CHHHHHc
Confidence            5999999999999999999999999999999999984  8999999999 9999999999999999999999 9999999


Q ss_pred             cCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEe
Q 009464          336 GAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIAN  414 (534)
Q Consensus       336 GAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~  414 (534)
                      ||||||++   +   +||||||.||+++|++.             ++++ +++|+|+||+|++++++|.+.|+ +|+|+|
T Consensus        80 GAvNTi~~---~---~G~NTD~~G~~~~l~~~-------------~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~n  139 (253)
T 3u62_A           80 KAVNCVFR---G---KGYNTDWVGVVKSLEGV-------------EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVN  139 (253)
T ss_dssp             TCCCEEET---T---EEECCHHHHHHHHTTTC-------------CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred             CcceEeec---C---EEEcchHHHHHHHHHhc-------------CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEe
Confidence            99999985   3   99999999999997431             3567 89999999999999999999999 999999


Q ss_pred             CCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHH
Q 009464          415 RTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE  494 (534)
Q Consensus       415 R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~  494 (534)
                      |+.+++++++++++.  ..++++.+ ....+|+||||||+||.|.  ..+++.+.+++..+|+|++|+  .|+|+++|++
T Consensus       140 R~~~ka~~la~~~~~--~~~~~~~~-~~~~aDiVInatp~gm~p~--~~~i~~~~l~~~~~V~Divy~--~T~ll~~A~~  212 (253)
T 3u62_A          140 RTIERAKALDFPVKI--FSLDQLDE-VVKKAKSLFNTTSVGMKGE--ELPVSDDSLKNLSLVYDVIYF--DTPLVVKARK  212 (253)
T ss_dssp             SCHHHHHTCCSSCEE--EEGGGHHH-HHHTCSEEEECSSTTTTSC--CCSCCHHHHTTCSEEEECSSS--CCHHHHHHHH
T ss_pred             CCHHHHHHHHHHccc--CCHHHHHh-hhcCCCEEEECCCCCCCCC--CCCCCHHHhCcCCEEEEeeCC--CcHHHHHHHH
Confidence            999999988776532  23444433 2346899999999999876  346777778888999999999  8999999999


Q ss_pred             CCCe-EeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          495 SGAT-IVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       495 ~G~~-ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +||+ +++|++||++||+.||++|||  .+++.|++.+.+
T Consensus       213 ~G~~~~~~Gl~MLv~Qa~~af~~wtg--~~~~~~~~~~~~  250 (253)
T 3u62_A          213 LGVKHIIKGNLMFYYQAMENLKIWGI--YDEEVFKEVFGE  250 (253)
T ss_dssp             HTCSEEECTHHHHHHHHHHHHHHTTC--CCHHHHHHHHGG
T ss_pred             CCCcEEECCHHHHHHHHHHHHHHHhC--CCHHHHHHHHHH
Confidence            9999 999999999999999999999  467888887765

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=100.00  E-value=1.2e-57  Score=460.98  Aligned_cols=268  Identities=37%  Similarity=0.576  Sum_probs=239.6

Q ss_pred             ccCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhccccc
Q 009464          251 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEV  328 (534)
Q Consensus       251 ~~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~  328 (534)
                      +++++|++|||||+|++||+||.|||++|+++|+|+.|.++++  +++.++++.++..+|.|+|||+|||+++++++|++
T Consensus         6 m~~~~~~~~~viG~pi~hS~Sp~~h~~~~~~~gi~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nVtiP~k~~i~~~~d~~   85 (287)
T 1nvt_A            6 MINAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEI   85 (287)
T ss_dssp             CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGGGGHHHHHHHHTCCEEEECTTSTTGGGGGCSEE
T ss_pred             hhcCCccEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEEcCHHHHHHHHHHHHhCCCCEEEEccCCHHHHHHHHHhc
Confidence            3677889999999999999999999999999999999999998  58999999998779999999999999999999999


Q ss_pred             CHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC
Q 009464          329 DTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA  408 (534)
Q Consensus       329 ~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~  408 (534)
                      ++.|+.+|||||++++  +|+|+|+|||+.||+.+|++.           +.++++|+++|+|+||+|++++++|++.| 
T Consensus        86 ~~~a~~igavnt~~~~--~g~l~g~nTd~~G~~~~L~~~-----------~~~l~~k~vlV~GaGgiG~aia~~L~~~G-  151 (287)
T 1nvt_A           86 DKDAQLIGAVNTIKIE--DGKAIGYNTDGIGARMALEEE-----------IGRVKDKNIVIYGAGGAARAVAFELAKDN-  151 (287)
T ss_dssp             CHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-----------HCCCCSCEEEEECCSHHHHHHHHHHTSSS-
T ss_pred             CHHHHHhCceeeEEee--CCEEEEecCCHHHHHHHHHHh-----------CCCcCCCEEEEECchHHHHHHHHHHHHCC-
Confidence            9999999999999987  899999999999999998752           24578899999999999999999999999 


Q ss_pred             eEEEEeCCHHHHHHHHHHHcCc-------ccccccccccCCCCceEEEEcCCCCCCCCCCCCCC-CccccCCCCEEEEEe
Q 009464          409 RVVIANRTYDRARELAETVGGH-------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYALVFDAV  480 (534)
Q Consensus       409 ~v~i~~R~~~~a~~la~~~~~~-------~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i-~~~~l~~~~~v~Dv~  480 (534)
                      +|++++|+.++++++++.++..       ..+..++.+ ..+.+|+||||||+++.|..+..++ +.++++++.+++|++
T Consensus       152 ~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~-~~~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~  230 (287)
T 1nvt_A          152 NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDV-DLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLI  230 (287)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTC-CCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred             CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHH-hhCCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            9999999999999998876421       112223333 4567999999999998765444556 667788889999999


Q ss_pred             cCCChhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          481 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       481 y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      |+|..|+|++.|+++||.+++|++||++|++.+|++|||.++|.+.|++++++
T Consensus       231 y~p~~t~ll~~a~~~G~~~~~Gl~mL~~Qa~~af~~w~g~~~~~~~~~~~~~~  283 (287)
T 1nvt_A          231 YNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIID  283 (287)
T ss_dssp             CSSSSCHHHHHHHTTTCEEECTHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred             eCCccCHHHHHHHHCCCEEeCcHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998765

>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*

Probab=100.00  E-value=1.5e-57  Score=450.99  Aligned_cols=229  Identities=31%  Similarity=0.475  Sum_probs=205.6

Q ss_pred             CCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh----hHHHHHhhhC-CCcEEEEeccCCCCCCCCC
Q 009464           21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR----ENIKTLIKES-PVPTLFTYRPIWEGGQYDG   95 (534)
Q Consensus        21 ~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~   95 (534)
                      ..+|+|||||+++|.++++++++.+...|+|+||||+|+|.+.++.    +++..+++.. ++|+|||+|+++|||++++
T Consensus        17 ~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~   96 (258)
T 4h3d_A           17 EGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLI   96 (258)
T ss_dssp             SSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCC
T ss_pred             CCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCC
Confidence            4579999999999999999999998889999999999999986543    3344555544 7999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhC-CcEEEEeccccchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEE
Q 009464           96 DENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFA  173 (534)
Q Consensus        96 ~~~~~~~~l~~~~~~~-~~~iDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia  173 (534)
                      ++++|+++++.+++.+ +||||||+..+++..+++.. .++.++|||+|||||++||++++|.+++.+|.++||||+|||
T Consensus        97 ~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia  176 (258)
T 4h3d_A           97 SRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIA  176 (258)
T ss_dssp             CHHHHHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             CHHHHHHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEE
Confidence            9999999999999988 99999999999988888764 456899999999999999999999999999999999999999


Q ss_pred             cccCCHHHHHHHHHHHhhc--cCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhccc
Q 009464          174 TTALDITDVARVFQITVHS--QVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQ  251 (534)
Q Consensus       174 ~~~~~~~D~~~l~~~~~~~--~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~~~  251 (534)
                      +||++.+|+++|++++.++  ...++|+|+|+||+.|++||+++++|||++||+++++  ++||||+++++|+++|++.+
T Consensus       177 ~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~fGS~lTf~~~~~--~sAPGQl~~~el~~~l~lL~  254 (258)
T 4h3d_A          177 VMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVISRLCGEIFGSALTFGAAKS--VSAPGQISFKELNSVLNLLH  254 (258)
T ss_dssp             ECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECTGGGGGGGTCHHHHCBCEEECBCC-----CTTCCBHHHHHHHHHHHH
T ss_pred             EccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChHHHHHHHHhCCceEeccCCC--CCCCCCCCHHHHHHHHHHHH
Confidence            9999999999999998775  2356899999999999999999999999999999976  49999999999999998653

>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}

Probab=100.00  E-value=1.1e-56  Score=444.53  Aligned_cols=236  Identities=28%  Similarity=0.364  Sum_probs=211.5

Q ss_pred             ccccccCCCCCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh----hHHHHHhhhC-CCcEEEEecc
Q 009464           12 SKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR----ENIKTLIKES-PVPTLFTYRP   86 (534)
Q Consensus        12 ~~~~~~~~~~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~R~   86 (534)
                      .|+......+..|+|||||+++|.++++.+++.+.+.|+|+||||+|+|.+.++.    +++..+++.. ++|+|||+|+
T Consensus         8 ~~v~~~~~g~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt   87 (257)
T 2yr1_A            8 IKVRNIWIGGTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRS   87 (257)
T ss_dssp             EEETTEEESSSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCC
T ss_pred             EEEeeeeeCCCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEee
Confidence            3455566668899999999999999999999998889999999999999876432    3456677766 8999999999


Q ss_pred             CCCCCCC-CCCHHHHHHHHHHHHHhC-CcEEEEeccccchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHH
Q 009464           87 IWEGGQY-DGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQ  163 (534)
Q Consensus        87 ~~eGG~~-~~~~~~~~~~l~~~~~~~-~~~iDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~  163 (534)
                      .+|||.+ ..++++|+++++.++++| +||||||++.++ .++++.. .+++++|||+|||||++||+.++|.++|++|.
T Consensus        88 ~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~  166 (257)
T 2yr1_A           88 EREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAE  166 (257)
T ss_dssp             TTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHH
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHH
Confidence            9999999 999999999999999999 999999999877 5666653 35689999999999999999999999999999


Q ss_pred             HcCCCEEEEEcccCCHHHHHHHHHHHhhc-cCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHH
Q 009464          164 ASGADIVKFATTALDITDVARVFQITVHS-QVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD  242 (534)
Q Consensus       164 ~~gaDi~Kia~~~~~~~D~~~l~~~~~~~-~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~  242 (534)
                      ++||||+|||+||++.+|+++|++++.+. ...+.|+|+||||+.|++||+++++|||++||+++++  ++||||+++++
T Consensus       167 ~~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~Tf~~l~~--~sAPGQl~~~e  244 (257)
T 2yr1_A          167 RYGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMGGLGAITRLAGWLFGSAVTFAVGNQ--SSAPGQIPIDD  244 (257)
T ss_dssp             HTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECTTTTHHHHHHGGGGTBCEEECBSSS--CSSTTCCBHHH
T ss_pred             hcCCCEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHHHHhCCceEecCCCC--CCCCCCCCHHH
Confidence            99999999999999999999999998876 2346899999999999999999999999999999975  59999999999


Q ss_pred             HHhhhhcc
Q 009464          243 LLDLYNFR  250 (534)
Q Consensus       243 l~~~~~~~  250 (534)
                      ++++|+..
T Consensus       245 l~~~l~~l  252 (257)
T 2yr1_A          245 VRTVLSIL  252 (257)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998754

>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*

Probab=100.00  E-value=1.3e-56  Score=447.50  Aligned_cols=235  Identities=28%  Similarity=0.428  Sum_probs=211.4

Q ss_pred             ccccCCCCCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh----hHHHHHhhhC-CCcEEEEeccCC
Q 009464           14 LVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR----ENIKTLIKES-PVPTLFTYRPIW   88 (534)
Q Consensus        14 ~~~~~~~~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~R~~~   88 (534)
                      +..-.+-..+|+|||||+++|.++++.+++.+...|+|+||||+|+|.+.++.    +++..+|+.. ++|+|||+|+++
T Consensus        30 v~~~~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~  109 (276)
T 3o1n_A           30 VRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAK  109 (276)
T ss_dssp             ETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGG
T ss_pred             ECCEEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhh
Confidence            44444556689999999999999999999998768999999999999976542    3455666666 899999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhC-CcEEEEeccccchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcC
Q 009464           89 EGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASG  166 (534)
Q Consensus        89 eGG~~~~~~~~~~~~l~~~~~~~-~~~iDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~g  166 (534)
                      |||.|+.++++|+++++.++++| |||||||+..+++.++++.. .+++++|||+|||||++||+.++|.++|++|.++|
T Consensus       110 eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~G  189 (276)
T 3o1n_A          110 EGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELG  189 (276)
T ss_dssp             GTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTT
T ss_pred             hCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcC
Confidence            99999999999999999999999 99999999999988888874 35689999999999999999999999999999999


Q ss_pred             CCEEEEEcccCCHHHHHHHHHHHhhcc--CCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHH
Q 009464          167 ADIVKFATTALDITDVARVFQITVHSQ--VSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLL  244 (534)
Q Consensus       167 aDi~Kia~~~~~~~D~~~l~~~~~~~~--~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~  244 (534)
                      |||+|||+||++.+|+++|++++.+..  ..++|+|+||||+.|++||+++++|||++||+++++  ++||||+++++|+
T Consensus       190 aDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G~~SRi~~~~~GS~vTf~~l~~--~sAPGQl~~~~l~  267 (276)
T 3o1n_A          190 ADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKK--ASAPGAISVADLR  267 (276)
T ss_dssp             CSEEEEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECSGGGTHHHHCHHHHTCCEEECBSSC--CSSTTCCBHHHHH
T ss_pred             CCEEEEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECCCchhhHHHHHHHhCCceEecCCCC--CCCCCCCCHHHHH
Confidence            999999999999999999999987752  256899999999999999999999999999999975  5999999999999


Q ss_pred             hhhhcc
Q 009464          245 DLYNFR  250 (534)
Q Consensus       245 ~~~~~~  250 (534)
                      ++|+..
T Consensus       268 ~~l~~l  273 (276)
T 3o1n_A          268 TVLTIL  273 (276)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998753

>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*

Probab=100.00  E-value=1.6e-56  Score=439.08  Aligned_cols=225  Identities=26%  Similarity=0.388  Sum_probs=198.5

Q ss_pred             CeEEEEeccC-CCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh---hHHHHHhhhC-CCcEEEEeccCCCCCCCCCCH
Q 009464           23 PTLICVPIMG-ESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKES-PVPTLFTYRPIWEGGQYDGDE   97 (534)
Q Consensus        23 ~~~icv~l~~-~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~---~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~   97 (534)
                      .|+|||||++ +|.+++++++..+.+.|+|+||||+|+|.+.+..   +++..+++.. ++|+|||+|+.+|||.++.++
T Consensus         3 ~p~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~   82 (238)
T 1sfl_A            3 HVEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTN   82 (238)
T ss_dssp             CCEEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCH
T ss_pred             CCeEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCH
Confidence            5799999999 9999999999988888999999999999876532   3344565555 799999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCcEEEEeccc--cchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEE
Q 009464           98 NERVDVLRLAMEL-GADYIDVELQV--AREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFA  173 (534)
Q Consensus        98 ~~~~~~l~~~~~~-~~~~iDiEl~~--~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia  173 (534)
                      ++|+++++.+++. ++||||||++.  +++..+++.. .+++++|||+|||||++||+.++|.++|++|.++||||+|||
T Consensus        83 ~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia  162 (238)
T 1sfl_A           83 DSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLA  162 (238)
T ss_dssp             HHHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence            9999999999998 59999999999  8877777764 356789999999999999999999999999999999999999


Q ss_pred             cccCCHHHHHHHHHHHhhc-cCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhc
Q 009464          174 TTALDITDVARVFQITVHS-QVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF  249 (534)
Q Consensus       174 ~~~~~~~D~~~l~~~~~~~-~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~  249 (534)
                      +||++.+|+++|++++.++ ...+.|+|+||||+.|++||+++++|||++||++++.  ++||||+++++++++|+.
T Consensus       163 ~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~tf~~l~~--~sAPGQl~~~el~~~l~~  237 (238)
T 1sfl_A          163 VMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGE--PQAPGQIDVTDLKAQVTL  237 (238)
T ss_dssp             ECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGGGHHHHHTGGGGTBCEEEEBSSC--CSSTTCCBHHHHHHHHTT
T ss_pred             ecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCCCchHHHHHHHHhCCCeeecCCCC--CCCCCCCCHHHHHHHHHh
Confidence            9999999999999998875 2246899999999999999999999999999999976  499999999999999864

>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}

Probab=100.00  E-value=8.8e-55  Score=424.46  Aligned_cols=220  Identities=25%  Similarity=0.317  Sum_probs=189.2

Q ss_pred             CCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhh-C-CCcEEEEeccCCCCCCCCCCHHH
Q 009464           22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-S-PVPTLFTYRPIWEGGQYDGDENE   99 (534)
Q Consensus        22 ~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~-~-~~PiI~T~R~~~eGG~~~~~~~~   99 (534)
                      +.|+|||||+++|.++++.+++.+. .++|+||||+|+|.+.+ .+.+...++. . ++|+|||+|+.+|||.|+.++++
T Consensus         2 ~~~~Icvpi~~~t~~e~~~~~~~~~-~~~D~vElRvD~l~~~~-~~~v~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~~   79 (231)
T 2ocz_A            2 NAMRIVAPVMPRHFDEAQAIDISKY-EDVNLIEWRADFLPKDE-IVAVAPAIFEKFAGKEIIFTLRTVQEGGNITLSSQE   79 (231)
T ss_dssp             -CCEEEEEECCSSHHHHHTCCGGGG-TTCSEEEEEGGGSCGGG-HHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCHHH
T ss_pred             CCCEEEEEeCCCCHHHHHHHHHHhc-cCCCEEEEEeccccccC-HHHHHHHHHHHcCCCcEEEEEeecccCCCCCCCHHH
Confidence            5789999999999999999988854 48999999999998654 2344433322 3 39999999999999999999999


Q ss_pred             HHHHHHHHHHhC-CcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCC
Q 009464          100 RVDVLRLAMELG-ADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALD  178 (534)
Q Consensus       100 ~~~~l~~~~~~~-~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~  178 (534)
                      |+++++.++++| +||||||++.++++++.+   +. .+|||+|||||++||  ++|.++|++|.++||||+|||+||++
T Consensus        80 ~~~ll~~~~~~g~~d~iDvEl~~~~~~i~~~---~~-~~kvI~S~Hdf~~tp--~el~~~~~~~~~~gaDivKia~~a~~  153 (231)
T 2ocz_A           80 YVDIIKEINAIYNPDYIDFEYFTHKSVFQEM---LD-FPNLILSYHNFEETP--ENLMEAFSEMTKLAPRVVKIAVMPQS  153 (231)
T ss_dssp             HHHHHHHHHHHHCCSEEEEETTTTGGGGGGG---TT-CSSEEEEEEESSCCC--TTHHHHHHHHHHTCCSEEEEEECCSS
T ss_pred             HHHHHHHHHHcCCCCEEEEECCCCHHHHHHh---hc-CCeEEEEecCCCCCH--HHHHHHHHHHHHcCCCEEEEEeecCC
Confidence            999999999998 999999999987665544   33 499999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcc--CCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhccc
Q 009464          179 ITDVARVFQITVHSQ--VSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQ  251 (534)
Q Consensus       179 ~~D~~~l~~~~~~~~--~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~~~  251 (534)
                      .+|+++|++++.+++  ..++|+|+|+||+.|++||+++++|||++||++++.  ++||||+++++++++++...
T Consensus       154 ~~D~l~ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~Tf~~l~~--~sAPGQl~~~el~~~l~~l~  226 (231)
T 2ocz_A          154 EQDVLDLMNYTRGFKTLNPEQEFATISMGKLGRLSRFAGDVIGSSWTYVSLDH--VSGPGQVTLNDMKRIIEVLE  226 (231)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEEEEEECHHHHGGGGGCHHHHTCCEEECBC--------CCCBHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhhccCCCCEEEEEcCCCchhHHHHHHHhCCceEeccCCC--CCCCCCCCHHHHHHHHHHhh
Confidence            999999999998752  357899999999999999999999999999999976  49999999999999987643

>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}

Probab=100.00  E-value=1.1e-54  Score=428.76  Aligned_cols=223  Identities=24%  Similarity=0.362  Sum_probs=188.9

Q ss_pred             CCCCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhh-CCCcEEEEeccCCCCCCCCCCH
Q 009464           19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SPVPTLFTYRPIWEGGQYDGDE   97 (534)
Q Consensus        19 ~~~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~   97 (534)
                      +...+|+|||||+++|.++++ ++..+...|+|+||||+|+|.+.+..+....+++. .++|+|||+|+++|||.|+.++
T Consensus        30 ~g~g~pkIcvpl~~~t~~e~~-~~~~~~~~gaD~VElRvD~l~~~~~~~v~~~l~~~~~~~PiI~T~Rt~~EGG~~~~~~  108 (259)
T 3l9c_A           30 MGRGSMKIVVPVMPQNIEEAN-QLDLTRIDSTDIIEWRADYLVKDDILTVAPAIFEKFSGHEVIFTLRTEKEGGNISLSN  108 (259)
T ss_dssp             ----CCEEEEEECCSSHHHHH-HCCCTTCCTTCEEEEEGGGSCGGGHHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCH
T ss_pred             ECCCCcEEEEEecCCCHHHHH-HHHHhhccCCCEEEEEeccccchhHHHHHHHHHHhcCCCcEEEEEeehhhCCCCCCCH
Confidence            445689999999999999997 55555567999999999999854333333445544 5899999999999999999999


Q ss_pred             HHHHHHHHHHHH-hCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEccc
Q 009464           98 NERVDVLRLAME-LGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTA  176 (534)
Q Consensus        98 ~~~~~~l~~~~~-~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~  176 (534)
                      ++|+++++.+++ +++||||||++.+++.++++.    +..|||+|||||++||+  +|.++|++|.++||||+|||+||
T Consensus       109 ~~y~~ll~~~~~~~~~dyIDVEl~~~~~~~~~l~----~~~kiI~S~Hdf~~tp~--el~~~~~~~~~~GaDIvKia~~a  182 (259)
T 3l9c_A          109 EDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMY----DFSNLILSYHNFEETPE--NLMEVFSELTALAPRVVKIAVMP  182 (259)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEEEHHHHGGGGGGGT----TCSSEEEEEEESSCCCT--THHHHHHHHHHTCCSEEEEEECC
T ss_pred             HHHHHHHHHHHHhcCCCEEEEECcCCHHHHHHHH----hcCeEEEEeccCCCCHH--HHHHHHHHHHHcCCCEEEEEecC
Confidence            999999999998 789999999999888877774    34599999999999998  89999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhhcc--CCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhcc
Q 009464          177 LDITDVARVFQITVHSQ--VSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR  250 (534)
Q Consensus       177 ~~~~D~~~l~~~~~~~~--~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~~  250 (534)
                      ++.+|+++|++++.+++  ..+.|+|+||||+.|++||+++++|||++||+++++  ++||||+++++|+++|+..
T Consensus       183 ~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G~~SRi~~~~~GS~lTf~~l~~--~sAPGQl~~~el~~~l~~l  256 (259)
T 3l9c_A          183 KNEQDVLDLMNYTRGFKTLNPNQEYVTMSMSKLGRISRLAADLIGSSWTFASLEQ--ESAPGQISLADMRKIKEVL  256 (259)
T ss_dssp             SSHHHHHHHHHHHHHHHHHCTTSEEEEEECTGGGHHHHHTHHHHTBSEEECBC---------CCBHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhccCCCCEEEEECCCCcccHHHHHHHhCCccccccCCC--CCCCCCCCHHHHHHHHHHH
Confidence            99999999999998752  356899999999999999999999999999999986  4999999999999998754

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=100.00  E-value=3.6e-53  Score=425.71  Aligned_cols=265  Identities=31%  Similarity=0.542  Sum_probs=235.5

Q ss_pred             cccCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccc
Q 009464          250 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  327 (534)
Q Consensus       250 ~~~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~  327 (534)
                      .+++.+|++||+||+|++||+||.|||++|+++|+|+.|.++++  +++.++++.++.++|.|+|||+|||+++++++|+
T Consensus         6 ~~~~~~t~~~~liG~pi~hs~sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nvtiP~k~~i~~~ld~   85 (275)
T 2hk9_A            6 HMINAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDY   85 (275)
T ss_dssp             -CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCSEEEEEEECCGGGHHHHHHHHHHHTCCEEEECTTSTTTTGGGCSE
T ss_pred             ccccCCceEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEECCHHHHHHHHHHHHhCCCCEEEECccCHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999998  4899999999888999999999999999999999


Q ss_pred             cCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCC
Q 009464          328 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG  407 (534)
Q Consensus       328 ~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G  407 (534)
                      +++.|+.+||||||+++  +|++.|+|||+.||+.+|++.           +.++++++++|+|+|++|+++++.|.+.|
T Consensus        86 l~~~A~~~gavnti~~~--~g~~~g~nTd~~G~~~~l~~~-----------~~~~~~~~v~iiGaG~~g~aia~~L~~~g  152 (275)
T 2hk9_A           86 VEDTAKEIGAVNTVKFE--NGKAYGYNTDWIGFLKSLKSL-----------IPEVKEKSILVLGAGGASRAVIYALVKEG  152 (275)
T ss_dssp             ECHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-----------CTTGGGSEEEEECCSHHHHHHHHHHHHHT
T ss_pred             hhHHHHHhCCcceEEee--CCEEEeecCCHHHHHHHHHHh-----------CCCcCCCEEEEECchHHHHHHHHHHHHcC
Confidence            99999999999999987  899999999999999998752           23567899999999999999999999999


Q ss_pred             CeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhH
Q 009464          408 ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR  487 (534)
Q Consensus       408 ~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~  487 (534)
                      ++|+++||+.++++++++.++....  +++.+ ....+|+||+|||.++.+.... +++...++++.+++|++|  ..|+
T Consensus       153 ~~V~v~~r~~~~~~~l~~~~g~~~~--~~~~~-~~~~aDiVi~atp~~~~~~~~~-~i~~~~l~~g~~viDv~~--~~t~  226 (275)
T 2hk9_A          153 AKVFLWNRTKEKAIKLAQKFPLEVV--NSPEE-VIDKVQVIVNTTSVGLKDEDPE-IFNYDLIKKDHVVVDIIY--KETK  226 (275)
T ss_dssp             CEEEEECSSHHHHHHHTTTSCEEEC--SCGGG-TGGGCSEEEECSSTTSSTTCCC-SSCGGGCCTTSEEEESSS--SCCH
T ss_pred             CEEEEEECCHHHHHHHHHHcCCeee--hhHHh-hhcCCCEEEEeCCCCCCCCCCC-CCCHHHcCCCCEEEEcCC--ChHH
Confidence            9999999999999998876643221  13333 3457899999999998764222 455567888899999999  7899


Q ss_pred             HHHHHHHCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          488 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       488 ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +++.++++|+++++|+.|+++|++.+|++|+|.++|.+.|++.+++
T Consensus       227 ll~~a~~~g~~~v~g~~mlv~q~~~a~~~w~g~~~~~~~~~~~~~~  272 (275)
T 2hk9_A          227 LLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVPYSVAERSVRD  272 (275)
T ss_dssp             HHHHHHHTTCEEECSHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred             HHHHHHHCcCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998765

>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A

Probab=100.00  E-value=3.5e-52  Score=403.16  Aligned_cols=211  Identities=28%  Similarity=0.420  Sum_probs=182.4

Q ss_pred             EEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh---hHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHH
Q 009464           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERV  101 (534)
Q Consensus        25 ~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~  101 (534)
                      +|||||+++|.++++++++.   .|+|+||||+|+|.+.+..   +++..+++. ++|+|||+|+++|||.   ++++|+
T Consensus         2 ~icv~l~~~~~~~~~~~~~~---~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~-~~PiI~T~R~~~eGG~---~~~~~~   74 (219)
T 2egz_A            2 LIAVPLDDTNFSENLKKAKE---KGADIVELRVDQFSDTSLNYVKEKLEEVHSQ-GLKTILTIRSPEEGGR---EVKNRE   74 (219)
T ss_dssp             EEEEEECSTTHHHHHHHHHH---HTCSEEEEEGGGCSCCCHHHHHHHHHHHHHT-TCEEEEECCCGGGTCC---CCTTHH
T ss_pred             EEEEEeCCCCHHHHHHHHHH---cCCCEEEEEeccccccCHHHHHHHHHHHHhc-CCcEEEEEeehhccCC---CHHHHH
Confidence            59999999999999887765   4899999999999876542   345556654 7999999999999999   678899


Q ss_pred             HHHHHHHHhCCcEEEEeccccchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCCHH
Q 009464          102 DVLRLAMELGADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDIT  180 (534)
Q Consensus       102 ~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~~~  180 (534)
                      ++++.++++ +||||||++.++ ..+.+.. .+..++|+|+|||||++||+.+++.+++++|.++|| |+|||+||++.+
T Consensus        75 ~ll~~~~~~-~d~iDvEl~~~~-~~~~l~~~~~~~g~kvI~S~Hdf~~tp~~~el~~~~~~~~~~ga-ivKia~~a~~~~  151 (219)
T 2egz_A           75 ELFEELSPL-SDYTDIELSSRG-LLVKLYNITKEAGKKLIISYHNFELTPPNWIIREVLREGYRYGG-IPKIAVKANSYE  151 (219)
T ss_dssp             HHHHHHTTT-SSEEEEETTCHH-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTS-EEEEEEECSSHH
T ss_pred             HHHHHHHhc-CCEEEEEccCCc-cHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCC-EEEEEEccCCHH
Confidence            999999999 999999999851 1122221 223568999999999999999999999999999998 999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhcc
Q 009464          181 DVARVFQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR  250 (534)
Q Consensus       181 D~~~l~~~~~~~~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~~  250 (534)
                      |+++|++++.+.+   .|+|+||||+.|++||++|++|||++||+++++  ++||||+++++++++|+..
T Consensus       152 D~l~ll~~~~~~~---~P~I~~~MG~~G~~SRi~~~~~GS~~tf~~l~~--~sAPGQl~~~el~~~l~~l  216 (219)
T 2egz_A          152 DVARLLCISRQVE---GEKILISMGDYGKISRLAGYVFGSVITYCSLEK--AFAPGQIPLEEMVELRKKF  216 (219)
T ss_dssp             HHHHHHHHHTTSC---SCBEEEEESSGGGGHHHHGGGGTBCEEECBCC-----CTTCCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC---CCEEEEECCCcchhHHHHHHHhCCceEecCCCC--CCCCCCCCHHHHHHHHHHh
Confidence            9999999997763   799999999999999999999999999999975  5999999999999998754

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=100.00  E-value=1e-49  Score=398.02  Aligned_cols=257  Identities=33%  Similarity=0.535  Sum_probs=230.3

Q ss_pred             ccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHH
Q 009464          256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK  333 (534)
Q Consensus       256 t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~  333 (534)
                      +++|||||+|++||+||.|||++|+++|+++.|.++++  +++.++++.++.. +.|+|||+|||+++++++|++++.|+
T Consensus         1 ~~~~~~~G~pi~hs~sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~-~~G~~vt~P~k~~i~~~~~~l~~~a~   79 (263)
T 2d5c_A            1 MLRFAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-FRGVNLTLPLKEAALAHLDWVSPEAQ   79 (263)
T ss_dssp             CEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGHHHHHHHHHHH-CSEEEECTTCTTGGGGGCSEECHHHH
T ss_pred             CeEEEEECCCcccccCHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHhcccc-CceEEEcccCHHHHHHHHHHHhHHHH
Confidence            36899999999999999999999999999999999987  4799999988776 99999999999999999999999999


Q ss_pred             HhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEE
Q 009464          334 SIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA  413 (534)
Q Consensus       334 ~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~  413 (534)
                      .+|+|||++++  +|++.|+|||+.|++.+|++.           +.++++ +++|+|+|++|+++++.|.+.|++|+++
T Consensus        80 ~~gavn~i~~~--~g~~~g~ntd~~g~~~~l~~~-----------~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~  145 (263)
T 2d5c_A           80 RIGAVNTVLQV--EGRLFGFNTDAPGFLEALKAG-----------GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVW  145 (263)
T ss_dssp             HHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHT-----------TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred             HhCCCCcEEcc--CCeEEEeCCCHHHHHHHHHHh-----------CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEE
Confidence            99999999986  899999999999999998752           245778 9999999999999999999999999999


Q ss_pred             eCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHH
Q 009464          414 NRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE  493 (534)
Q Consensus       414 ~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~  493 (534)
                      ||+.++++++++.++..   ++++.+ . ..+|+||++||.++.+... .+++...++++.+++|++|+|.+|++++.++
T Consensus       146 ~r~~~~~~~l~~~~~~~---~~~~~~-~-~~~Divi~~tp~~~~~~~~-~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~  219 (263)
T 2d5c_A          146 NRTPQRALALAEEFGLR---AVPLEK-A-REARLLVNATRVGLEDPSA-SPLPAELFPEEGAAVDLVYRPLWTRFLREAK  219 (263)
T ss_dssp             CSSHHHHHHHHHHHTCE---ECCGGG-G-GGCSEEEECSSTTTTCTTC-CSSCGGGSCSSSEEEESCCSSSSCHHHHHHH
T ss_pred             ECCHHHHHHHHHHhccc---hhhHhh-c-cCCCEEEEccCCCCCCCCC-CCCCHHHcCCCCEEEEeecCCcccHHHHHHH
Confidence            99999999999888654   334444 3 5689999999999876422 3345567788889999999999999999999


Q ss_pred             HCCCeEeccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          494 ESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       494 ~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      ++|+++++|+.|+++|++.+|++|+|.++|.+.|++.+++
T Consensus       220 ~~g~~~v~g~~mlv~q~~~a~~~w~g~~~~~~~~~~~~~~  259 (263)
T 2d5c_A          220 AKGLKVQTGLPMLAWQGALAFRLWTGLLPDPSGMEEAARR  259 (263)
T ss_dssp             HTTCEEECSHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred             HCcCEEECcHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999998765

>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}

Probab=100.00  E-value=1.5e-50  Score=384.49  Aligned_cols=192  Identities=28%  Similarity=0.439  Sum_probs=175.9

Q ss_pred             EEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHH
Q 009464           27 CVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRL  106 (534)
Q Consensus        27 cv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~  106 (534)
                      +|||+++|.++ +++++.     +|+||||+|+|.+.        ++ ..++|+|||+|+++|||.++.++++|+++++.
T Consensus         2 ~vpl~~~t~~~-~~~~~~-----aD~vElRvD~l~~~--------lr-~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~   66 (196)
T 2ox1_A            2 KLVATLSSPEE-LELAEK-----ADVVELRIDLFDFS--------GA-RVDKEKILTCRRVSDGGKFEGDERERIEKMKR   66 (196)
T ss_dssp             EEEEEECSHHH-HHHTTT-----CSEEEEETTTSCCT--------TS-CCCSEEEEECCBGGGTSSBCSCHHHHHHHHHH
T ss_pred             eeeEcCCCHHH-HHHHhc-----CCEEEEEEchhhhh--------HH-hcCCcEEEEEeecccCCCCCCCHHHHHHHHHH
Confidence            68999999999 876553     79999999999853        33 56899999999999999999999999999999


Q ss_pred             HHHhCC-cEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCCHHHHHHH
Q 009464          107 AMELGA-DYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARV  185 (534)
Q Consensus       107 ~~~~~~-~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~~~D~~~l  185 (534)
                      ++++|+ ||||||++.+++.+       ++++|||+|||||++||+++++.++++  .++| ||+|||+||++.+|+++|
T Consensus        67 ~~~~g~~d~iDvEl~~~~~~i-------~~~~kvI~S~Hdf~~tp~~~~l~~~~~--~~~g-DivKia~~a~~~~D~l~l  136 (196)
T 2ox1_A           67 AFDSLNPDYVDLESDLPDSAF-------DFNCRIIESYHNFIRTPDYSELKGIVE--GRRG-DLVKIATMGKSKRDVETI  136 (196)
T ss_dssp             HHHHHCCSEEEEETTSCGGGC-------CCSSEEEEEEEESSCCCCHHHHHHHHH--TCCS-SEEEEEEECCSHHHHHHH
T ss_pred             HHHhCCCcEEEEECCCCHhHH-------hCCCEEEEEecCCCCCcCHHHHHHHHH--HHcC-CEEEEEEcCCCHHHHHHH
Confidence            999997 99999999887652       178999999999999999999999999  8899 999999999999999999


Q ss_pred             HHHHhhccCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhc
Q 009464          186 FQITVHSQVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF  249 (534)
Q Consensus       186 ~~~~~~~~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~  249 (534)
                      ++++.+.+    |+|+||||+.|++||+++++|||++||+++++  ++||||+++++++++|+.
T Consensus       137 l~~~~~~~----p~I~~~MG~~G~~SRi~~~~~gs~~t~~~~~~--~sAPGQl~~~el~~~l~~  194 (196)
T 2ox1_A          137 VRILTNYD----DVVAFLMGERFSFTRVLAAYLGSPFIYCYVGS--PKAPGQISLDDAREIISR  194 (196)
T ss_dssp             HHHHHHCS----SEEEEEESGGGTHHHHHHHHTTCSEEEEESSS--CSSTTCCBHHHHHHHHHH
T ss_pred             HHHHhhCC----CeEEEEcCCCchhHHHhHhhhCCceEeccCCC--CCCCCCCCHHHHHHHHHH
Confidence            99998763    99999999999999999999999999999965  599999999999999875

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=100.00  E-value=5e-38  Score=317.33  Aligned_cols=248  Identities=18%  Similarity=0.171  Sum_probs=197.4

Q ss_pred             CCccccCCHHHHHHHHH-----HcCCCeEEEeccc--ccHHHHHHHh-cCCCCCEEEeccchHH-HHhhcccccCHHHHH
Q 009464          264 KPVGHSKSPILYNEAFK-----SVGFNGVFVHLLV--DDIAKFFQTY-SSNDFAGFSCTIPHKE-AAVKCCDEVDTVAKS  334 (534)
Q Consensus       264 ~pi~hS~SP~~hn~~f~-----~~gl~~~y~~~~~--~~~~~~~~~~-~~~~~~G~~VT~P~K~-~v~~~ld~~~~~A~~  334 (534)
                      .||.||+||.|||.+|+     .+|+++.|.++++  ++++++++.+ ...+..|+|||.|||. ..+..++++.+.++.
T Consensus         2 ~~i~hs~sp~~h~~~~~~~~~~~~g~~~~y~~~~v~~~~~~~~~~~~~~~~~~~g~~~t~~~~~G~~~~~~~~~~~~~~~   81 (287)
T 1lu9_A            2 KKLLFQFDTDATPSVFDVVVGYDGGADHITGYGNVTPDNVGAYVDGTIYTRGGKEKQSTAIFVGGGDMAAGERVFEAVKK   81 (287)
T ss_dssp             CCEEEEEESSSSCCHHHHHHHHHTTCSEEEEESSCCTTTHHHHHHHHHSSCCGGGGGGEEEEEECSCHHHHHHHHHHHHH
T ss_pred             CceEEEccCCCCCCchhhheeeccCcceEeccCCcCHHHHHhhhcceEEecCccccccceEEEccchHHHHHHHHHHHHH
Confidence            69999999999999999     5999999999998  5899999885 5778999999999965 334455555555554


Q ss_pred             --hcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEc-CchhHHHHHHHHHHCCCeEE
Q 009464          335 --IGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIG-AGGAGKALAYGAKAKGARVV  411 (534)
Q Consensus       335 --iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlG-aGG~graia~~L~~~G~~v~  411 (534)
                        +|||||++..  +  +.|+|||+.||+.+|++.+          +.++++|+++|+| +||+|+++++.|++.|++|+
T Consensus        82 ~~~gavnt~~~~--~--~~G~nTd~~g~~~~l~~~~----------~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~  147 (287)
T 1lu9_A           82 RFFGPFRVSCML--D--SNGSNTTAAAGVALVVKAA----------GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVV  147 (287)
T ss_dssp             HCBTTBCCEEEE--C--STTHHHHHHHHHHHHHHHT----------TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE
T ss_pred             hcCCCeEEEEec--C--CCcCCchHHHHHHHHHHhh----------ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEE
Confidence              5999999876  4  5799999999999987531          1346789999999 69999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHHcC----cc--ccc---ccccccCCCCceEEEEcCCCCCCCCCCCCCC-CccccCCCCEEEEEec
Q 009464          412 IANRTYDRARELAETVGG----HA--LSL---ADLENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYALVFDAVY  481 (534)
Q Consensus       412 i~~R~~~~a~~la~~~~~----~~--~~~---~~~~~~~~~~~divVn~t~~g~~~~~~~~~i-~~~~l~~~~~v~Dv~y  481 (534)
                      +++|+.++++++++++..    ..  .++   +++.+ ....+|+||||||+++.+.    ++ +...+.....++|++|
T Consensus       148 i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~DvlVn~ag~g~~~~----~~~~~~~~~~~~~~~dvn~  222 (287)
T 1lu9_A          148 LCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAE-AVKGAHFVFTAGAIGLELL----PQAAWQNESSIEIVADYNA  222 (287)
T ss_dssp             EEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHH-HTTTCSEEEECCCTTCCSB----CHHHHTTCTTCCEEEECCC
T ss_pred             EEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHH-HHHhCCEEEECCCccccCC----ChhHcCchHHHHHHHHhhh
Confidence            999999999998877632    11  122   22223 3456899999999887531    22 2223466789999999


Q ss_pred             CCCh----hHHHHHH------HHCCCeEeccHHHHHHHHHHHHHHhcCCCC--CHHHHHHHH
Q 009464          482 TPKI----TRLLREA------EESGATIVSGLEMFIGQAYEQYERFTGLPA--PKELFQKIM  531 (534)
Q Consensus       482 ~p~~----T~ll~~A------~~~G~~ii~Gl~ml~~Qa~~qf~lwtg~~~--p~~~~~~~~  531 (534)
                      .|..    |++++.|      +++|+++++|++|+++||+.+ ++|+|+++  +.+...+..
T Consensus       223 ~~~~~i~~t~ll~~a~~~~~~~~~G~~~v~gl~ml~~qa~~a-~~~~~~~~~~d~~~a~~~a  283 (287)
T 1lu9_A          223 QPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIA-KLFESSEGVFDAEEIYKLA  283 (287)
T ss_dssp             SSSCSBTTSCTTCEEEEETTEEEECHHHHHHHHHHHHHHHHH-HHTSCSCCEESHHHHHHHH
T ss_pred             hhhHHhhcchHHhhccccCCCccccceeECchHHHHHHHHHH-HHhhCCCcccCHHHHHHHH
Confidence            9999    9999999      999999999999999999999 99999875  344444433

>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*

Probab=100.00  E-value=1.3e-35  Score=312.55  Aligned_cols=235  Identities=18%  Similarity=0.231  Sum_probs=186.6

Q ss_pred             ccCCCccEEE--ecCCCccccCCHHHHHHH--HHHc-CCCeEEEecccc---cHHHHHHHhcCCCCCEEEe---ccchHH
Q 009464          251 QMGPDTKVFG--IIGKPVGHSKSPILYNEA--FKSV-GFNGVFVHLLVD---DIAKFFQTYSSNDFAGFSC---TIPHKE  319 (534)
Q Consensus       251 ~~~~~t~~~~--liG~pi~hS~SP~~hn~~--f~~~-gl~~~y~~~~~~---~~~~~~~~~~~~~~~G~~V---T~P~K~  319 (534)
                      -++..|+++|  ++|+   ||.||.|||++  |+++ |+|+.|++++++   ++.++++.+. ++|.|+||   |+|||+
T Consensus        68 vvtdgt~ilGlG~iG~---hS~sPvmh~ka~lf~~~gGid~~yi~ldv~d~de~~~~v~~l~-~~f~GinvED~T~P~k~  143 (439)
T 2dvm_A           68 VVSDGSRILGLGNIGP---LAGLPVMEGKALLFKRFGGVDAFPIMIKEQEPNKFIDIVKAIA-PTFGGINLEDIASPKCF  143 (439)
T ss_dssp             EEECSTTBTTTBCCCH---HHHHHHHHHHHHHHHHHHCCEEEEEECSCCSHHHHHHHHHHTG-GGCSEEEECSCCTTHHH
T ss_pred             EEECCCeEecccceec---cccCHHHHHHHHHHHHhCCCCCeeeeeecCCHHHHHHHHHHhC-ccCcEEEEEeCCCchHH
Confidence            4566678877  8998   99999999966  9999 899999999994   5666666665 79999999   999999


Q ss_pred             HHhhcccccCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHH
Q 009464          320 AAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKAL  399 (534)
Q Consensus       320 ~v~~~ld~~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~grai  399 (534)
                      ++++++|+         ||||+++.. |++++| |||+.||+++|+..           +.++++++++|+||||+|+++
T Consensus       144 ~il~~l~~---------avNt~vf~d-D~~gtg-ntd~aG~~~AL~~~-----------g~~l~~~rvlvlGAGgAg~ai  201 (439)
T 2dvm_A          144 YILERLRE---------ELDIPVFHD-DQQGTA-AVVLAGLLNALKVV-----------GKKISEITLALFGAGAAGFAT  201 (439)
T ss_dssp             HHHHHHHH---------HCSSCEEEH-HHHHHH-HHHHHHHHHHHHHH-----------TCCTTTCCEEEECCSHHHHHH
T ss_pred             HHHHHHHH---------hcCEEEEeC-CCcEEe-ehHHHHHHHHHHHh-----------CCCccCCEEEEECccHHHHHH
Confidence            99999986         999999863 788999 99999999998752           245788999999999999999


Q ss_pred             HHHHHHCCC---eEEEEe----CC--HHHHHH---HH---HHHcCcc---cccccccccCCCCceEEEEcCCC--CCCCC
Q 009464          400 AYGAKAKGA---RVVIAN----RT--YDRARE---LA---ETVGGHA---LSLADLENFNPEDGMILANTTSI--GMQPK  459 (534)
Q Consensus       400 a~~L~~~G~---~v~i~~----R~--~~~a~~---la---~~~~~~~---~~~~~~~~~~~~~~divVn~t~~--g~~~~  459 (534)
                      ++.|.+.|+   +|+++|    |+  .+++++   +.   ..+....   ..+.++.+ ....+|++||+|++  |+.+.
T Consensus       202 a~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e-~l~~aDVlInaT~~~~G~~~~  280 (439)
T 2dvm_A          202 LRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQE-ALKDADVLISFTRPGPGVIKP  280 (439)
T ss_dssp             HHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHH-HHTTCSEEEECSCCCSSSSCH
T ss_pred             HHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHH-HhccCCEEEEcCCCccCCCCh
Confidence            999999998   799999    98  333222   21   2221110   01223333 34568999999998  77542


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEe-ccHHHHHHHHHHHHHHhcC
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV-SGLEMFIGQAYEQYERFTG  519 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii-~Gl~ml~~Qa~~qf~lwtg  519 (534)
                         .  ....+.+..+|||+ |+|..|+++++|++.|+.++ +|++|+++|+..+| .|.|
T Consensus       281 ---e--~v~~m~~~~iVfDL-ynP~~t~~~~~A~~~G~~ivatG~~ml~~Q~nn~~-~FPG  334 (439)
T 2dvm_A          281 ---Q--WIEKMNEDAIVFPL-ANPVPEILPEEAKKAGARIVATGRSDYPNQINNLL-GFPG  334 (439)
T ss_dssp             ---H--HHTTSCTTCEEEEC-CSSSCSSCHHHHHHHTCSEECBSCSSSSSBCCGGG-THHH
T ss_pred             ---H--HHHhcCCCCEEEEC-CCCCCcchHHHHHHcCCeEEcCCCchhHHHHHHHh-cccC
Confidence               1  12345667899999 99999999999999999998 99999999998766 4444

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.68  E-value=1.4e-18  Score=180.61  Aligned_cols=191  Identities=16%  Similarity=0.195  Sum_probs=143.9

Q ss_pred             CCccccCCHHHHHHHHHHcCC-CeEEEecccccHHHHHHHhcCCCCCEEEe-ccchHHHHhhcccccCHHHHHh----cC
Q 009464          264 KPVGHSKSPILYNEAFKSVGF-NGVFVHLLVDDIAKFFQTYSSNDFAGFSC-TIPHKEAAVKCCDEVDTVAKSI----GA  337 (534)
Q Consensus       264 ~pi~hS~SP~~hn~~f~~~gl-~~~y~~~~~~~~~~~~~~~~~~~~~G~~V-T~P~K~~v~~~ld~~~~~A~~i----GA  337 (534)
                      +.|-+++||.+||..|.+.|+ ++.|..+.++.  ++++.++..++.|+|+ |+|||..+++++|.+++.|..+    ||
T Consensus        68 d~i~~vksP~~~~~~~~~~g~~~~~y~~~~~~~--~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA  145 (361)
T 1pjc_A           68 EMVVKVKEPLPAEYDLMQKDQLLFTYLHLAAAR--ELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGA  145 (361)
T ss_dssp             SEEECSSCCCGGGGGGCCTTCEEEECCCGGGCH--HHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCHHHHHhhcCCCEEEEEeccccCH--HHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHH
Confidence            334478999999999999997 89999988752  4566666779999999 9999999999999999999999    99


Q ss_pred             eeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          338 VNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       338 vNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +||+...  +|+  |+..      ..    +           ..+++++++|+|+||+|+++++.+...|++|++++|+.
T Consensus       146 ~nt~~~~--~g~--G~~l------~~----l-----------~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~  200 (361)
T 1pjc_A          146 RFLERQQ--GGR--GVLL------GG----V-----------PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV  200 (361)
T ss_dssp             HHTSGGG--TSC--CCCT------TC----B-----------TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             HHHhhcc--CCC--ceec------cC----C-----------CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            9999765  554  3321      01    1           12456899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCcc--c--ccccccccCCCCceEEEEcCCCCCCCCCCCCCCC---ccccCCCCEEEEEecCCC
Q 009464          418 DRARELAETVGGHA--L--SLADLENFNPEDGMILANTTSIGMQPKVDETPIP---KHALGHYALVFDAVYTPK  484 (534)
Q Consensus       418 ~~a~~la~~~~~~~--~--~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~---~~~l~~~~~v~Dv~y~p~  484 (534)
                      ++++.+.+.+....  .  ..+++.+ ....+|+||||++.++.+.  ...+.   ...++++.+++|+.|.+.
T Consensus       201 ~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~DvVI~~~~~~~~~~--~~li~~~~~~~~~~g~~ivdv~~~~g  271 (361)
T 1pjc_A          201 ERLSYLETLFGSRVELLYSNSAEIET-AVAEADLLIGAVLVPGRRA--PILVPASLVEQMRTGSVIVDVAVDQG  271 (361)
T ss_dssp             HHHHHHHHHHGGGSEEEECCHHHHHH-HHHTCSEEEECCCCTTSSC--CCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred             HHHHHHHHhhCceeEeeeCCHHHHHH-HHcCCCEEEECCCcCCCCC--CeecCHHHHhhCCCCCEEEEEecCCC
Confidence            99988876654321  1  1122322 2346899999998765321  11112   234677889999999763

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.40  E-value=4.7e-15  Score=158.65  Aligned_cols=142  Identities=21%  Similarity=0.340  Sum_probs=106.8

Q ss_pred             cccccCCcEEEEEcCchhHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHcCcc--ccc---ccccccCCCCceEEEEc
Q 009464          378 VSSALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA--LSL---ADLENFNPEDGMILANT  451 (534)
Q Consensus       378 ~~~~l~~k~vlVlGaGG~graia~~L~~~-G~~v~i~~R~~~~a~~la~~~~~~~--~~~---~~~~~~~~~~~divVn~  451 (534)
                      .+.++++++++|+|+|++|++++.+|++. |++|++++|+.++++++++..+...  .++   +++.+ ....+|+||||
T Consensus        17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~-~l~~~DvVIn~   95 (467)
T 2axq_A           17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDK-VLADNDVVISL   95 (467)
T ss_dssp             ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHH-HHHTSSEEEEC
T ss_pred             cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHH-HHcCCCEEEEC
Confidence            45667889999999999999999999998 5699999999999999886532221  122   22222 23468999999


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCEEEEEec-CCChhHHHHHHHHCCCeEeccHHH-----------HHHHH------HHH
Q 009464          452 TSIGMQPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESGATIVSGLEM-----------FIGQA------YEQ  513 (534)
Q Consensus       452 t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y-~p~~T~ll~~A~~~G~~ii~Gl~m-----------l~~Qa------~~q  513 (534)
                      +|.++.+     ++....+..+..++|++| .|..|.+++.|+++|+.+++|+.|           +++|+      +.+
T Consensus        96 tp~~~~~-----~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~PG~~~~~a~~li~q~~~~g~~~~s  170 (467)
T 2axq_A           96 IPYTFHP-----NVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEVHRAGGKLKS  170 (467)
T ss_dssp             SCGGGHH-----HHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             CchhhhH-----HHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCcCccchHHHHHHHHHHHHhccCcceE
Confidence            9987542     133445666678999998 677899999999999999999999           99998      568


Q ss_pred             HHHhcCCCCCHH
Q 009464          514 YERFTGLPAPKE  525 (534)
Q Consensus       514 f~lwtg~~~p~~  525 (534)
                      |++|+|..+|.+
T Consensus       171 ~~~wtG~~p~~~  182 (467)
T 2axq_A          171 FLSYCGGLPAPE  182 (467)
T ss_dssp             EEEEEEEEECGG
T ss_pred             EEEEecccCCcc
Confidence            899999865543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=99.35  E-value=2.5e-12  Score=127.28  Aligned_cols=220  Identities=15%  Similarity=0.158  Sum_probs=154.1

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHH-----HHhhcccc
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKE-----AAVKCCDE  327 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~-----~v~~~ld~  327 (534)
                      .-++| +|-+++-- ..-.+.++++|++..+..++-    +++.+.++.+ .++++.|+.|.+|+..     .++..++-
T Consensus        40 vilvg~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p  118 (286)
T 4a5o_A           40 VILVGTDPASQVYV-AHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHP  118 (286)
T ss_dssp             EEEESCCHHHHHHH-HHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCG
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCc
Confidence            44567 55555422 234568899999999998864    3566677767 4678999999999876     66666654


Q ss_pred             cCHHHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHHHHHHHHHC
Q 009464          328 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKAK  406 (534)
Q Consensus       328 ~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~graia~~L~~~  406 (534)
                       +..+.-+..+|+-..-  .|.....+++..|++..|++.           +.+++||+++|+|.|+ +|+.++..|...
T Consensus       119 -~KDVDG~~~~N~g~l~--~g~~~~~PcTp~gv~~lL~~~-----------~i~l~Gk~vvVvGrs~iVG~plA~lL~~~  184 (286)
T 4a5o_A          119 -DKDVDGFHPYNIGRLA--QRMPLLRPCTPKGIMTLLAST-----------GADLYGMDAVVVGASNIVGRPMALELLLG  184 (286)
T ss_dssp             -GGCTTCCSHHHHHHHH--TTCCSSCCHHHHHHHHHHHHT-----------TCCCTTCEEEEECTTSTTHHHHHHHHHHT
T ss_pred             -ccccccCChhhhHHHh--cCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCchhHHHHHHHHHHC
Confidence             4555566677764322  233446788999999998753           3578999999999987 799999999999


Q ss_pred             CCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC--
Q 009464          407 GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK--  484 (534)
Q Consensus       407 G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~--  484 (534)
                      |++|+++++.....+                 + ....+|+||+++|.   |    ..+..++++++.+|+|+.+++.  
T Consensus       185 gAtVtv~hs~T~~L~-----------------~-~~~~ADIVI~Avg~---p----~~I~~~~vk~GavVIDvgi~~~~~  239 (286)
T 4a5o_A          185 GCTVTVTHRFTRDLA-----------------D-HVSRADLVVVAAGK---P----GLVKGEWIKEGAIVIDVGINRQAD  239 (286)
T ss_dssp             TCEEEEECTTCSCHH-----------------H-HHHTCSEEEECCCC---T----TCBCGGGSCTTCEEEECCSCSSCC
T ss_pred             CCeEEEEeCCCcCHH-----------------H-HhccCCEEEECCCC---C----CCCCHHHcCCCeEEEEeccccccc
Confidence            999999987432221                 1 12357999999974   2    1367889999999999999873  


Q ss_pred             -----hhHHHHHHHHCCCe-Eec-c-----HHHHHHHHHHHHHHhc
Q 009464          485 -----ITRLLREAEESGAT-IVS-G-----LEMFIGQAYEQYERFT  518 (534)
Q Consensus       485 -----~T~ll~~A~~~G~~-ii~-G-----l~ml~~Qa~~qf~lwt  518 (534)
                           +..|-...+..++- -++ |     ..||+.+-+.+.+.|.
T Consensus       240 gkl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~~~  285 (286)
T 4a5o_A          240 GRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLH  285 (286)
T ss_dssp             CCSSCSBCHHHHHHHCSEECCSSCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCcccCccHHHHHhhceEeCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence                 23443333444431 233 2     3677877777776654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.32  E-value=5.9e-13  Score=140.19  Aligned_cols=146  Identities=25%  Similarity=0.337  Sum_probs=109.8

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ++.|++++|+|+|++|++++..|...|+ +|+++||+.++++++++.++....+++++.+ ....+|+||++||.+....
T Consensus       164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~-~l~~aDvVi~at~~~~~~~  242 (404)
T 1gpj_A          164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVD-HLARSDVVVSATAAPHPVI  242 (404)
T ss_dssp             CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHH-HHHTCSEEEECCSSSSCCB
T ss_pred             cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHH-HhcCCCEEEEccCCCCcee
Confidence            3578999999999999999999999999 9999999999999999998765544555444 3356899999998654211


Q ss_pred             CCCCCCCcccc----CCCCEEEEEecCCCh-h------------------HHHHHHHHCCCeEeccHHHHHHHHHHHHHH
Q 009464          460 VDETPIPKHAL----GHYALVFDAVYTPKI-T------------------RLLREAEESGATIVSGLEMFIGQAYEQYER  516 (534)
Q Consensus       460 ~~~~~i~~~~l----~~~~~v~Dv~y~p~~-T------------------~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~l  516 (534)
                       +...+....+    .+..+++|+.+ |.+ +                  .+.+++++.|+..++|++|+++|++.+|+.
T Consensus       243 -~~~~l~~~~lk~r~~~~~v~vdia~-P~~i~~~l~~l~~v~l~d~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~  320 (404)
T 1gpj_A          243 -HVDDVREALRKRDRRSPILIIDIAN-PRDVEEGVENIEDVEVRTIDDLRVIARENLERRRKEIPKVEKLIEEELSTVEE  320 (404)
T ss_dssp             -CHHHHHHHHHHCSSCCCEEEEECCS-SCSBCTTGGGSTTEEEEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             -cHHHHHHHHHhccCCCCEEEEEccC-CCCCCccccccCCeEEEeHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             1011111012    24468999987 653 3                  455666677888999999999999999999


Q ss_pred             hcCCCCCHHHHHH
Q 009464          517 FTGLPAPKELFQK  529 (534)
Q Consensus       517 wtg~~~p~~~~~~  529 (534)
                      |++...+...|++
T Consensus       321 w~~~~~~~~~I~~  333 (404)
T 1gpj_A          321 ELEKLKERRLVAD  333 (404)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHhcccHHHHHH
Confidence            9988766666654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=99.31  E-value=1.6e-12  Score=128.70  Aligned_cols=219  Identities=14%  Similarity=0.157  Sum_probs=153.7

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchH-----HHHhhcccc
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHK-----EAAVKCCDE  327 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~ld~  327 (534)
                      .-++| +|-+++-- ..-.+.++++|++..+..++-    +++.+.++.+ .++++.|+.|.+|+.     +.++..++-
T Consensus        39 vilvg~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p  117 (285)
T 3l07_A           39 AIIVGNDPASKTYV-ASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKP  117 (285)
T ss_dssp             EEEESCCHHHHHHH-HHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCG
T ss_pred             EEEECCCHHHHHHH-HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCc
Confidence            44557 45544332 344668899999999998864    3676777767 467899999999997     777777765


Q ss_pred             cCHHHHHhcCeeEEEEeccCCe-EEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHHHHHHHHH
Q 009464          328 VDTVAKSIGAVNCIIRRQSDGK-LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKA  405 (534)
Q Consensus       328 ~~~~A~~iGAvNTi~~~~~~g~-l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~graia~~L~~  405 (534)
                       +..+.-+..+|+-..-  .|. ....+++-.|++..|++.           +.+++||+++|+|+|+ +|+.++..|..
T Consensus       118 -~KDVDG~~~~N~G~l~--~g~~~~~~PcTp~gv~~lL~~~-----------~i~l~Gk~vvVIG~s~iVG~p~A~lL~~  183 (285)
T 3l07_A          118 -EKDVDGFHPTNVGRLQ--LRDKKCLESCTPKGIMTMLREY-----------GIKTEGAYAVVVGASNVVGKPVSQLLLN  183 (285)
T ss_dssp             -GGBTTCCSHHHHHHHH--HTCTTCCCCHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHHHHHHHHH
T ss_pred             -ccccccCChhheeehh--cCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCchhHHHHHHHHHH
Confidence             5566667777765432  232 346788999999988753           3578999999999988 69999999999


Q ss_pred             CCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC-
Q 009464          406 KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK-  484 (534)
Q Consensus       406 ~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~-  484 (534)
                      .|++|++++|+....                 .+ ....+|+||+++|.   |.    .+..++++++.+|+|+.+++. 
T Consensus       184 ~gAtVtv~hs~t~~L-----------------~~-~~~~ADIVI~Avg~---p~----~I~~~~vk~GavVIDvgi~~~~  238 (285)
T 3l07_A          184 AKATVTTCHRFTTDL-----------------KS-HTTKADILIVAVGK---PN----FITADMVKEGAVVIDVGINHVD  238 (285)
T ss_dssp             TTCEEEEECTTCSSH-----------------HH-HHTTCSEEEECCCC---TT----CBCGGGSCTTCEEEECCCEEET
T ss_pred             CCCeEEEEeCCchhH-----------------HH-hcccCCEEEECCCC---CC----CCCHHHcCCCcEEEEecccCcC
Confidence            999999998753221                 12 23458999999974   21    367889999999999999872 


Q ss_pred             -----hhHHHHHHHHCCC-eEecc------HHHHHHHHHHHHHHh
Q 009464          485 -----ITRLLREAEESGA-TIVSG------LEMFIGQAYEQYERF  517 (534)
Q Consensus       485 -----~T~ll~~A~~~G~-~ii~G------l~ml~~Qa~~qf~lw  517 (534)
                           +..|-...+..++ .-++|      ..||+.+.+.+.+.|
T Consensus       239 g~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~~~~  283 (285)
T 3l07_A          239 GKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQEL  283 (285)
T ss_dssp             TEEECSBCHHHHTTTCSEECCSSSSSHHHHHHHHHHHHHHHHHHT
T ss_pred             CceecCccHHHHHhhheEeCCCCCcChHHHHHHHHHHHHHHHHHh
Confidence                 3334322222332 11332      367777777766654

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=99.29  E-value=2.2e-12  Score=127.74  Aligned_cols=185  Identities=15%  Similarity=0.185  Sum_probs=135.6

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchH-----HHHhhcccc
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHK-----EAAVKCCDE  327 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~ld~  327 (534)
                      .-++| +|-+++-- ..-.+.++++|++..+..++-    +++.+.++.+ .++++.|+.|.+|+.     +.++..++-
T Consensus        38 vilvg~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p  116 (285)
T 3p2o_A           38 VILVGDNPASQTYV-KSKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIIS  116 (285)
T ss_dssp             EEEESCCHHHHHHH-HHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCG
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCc
Confidence            44567 45444332 334568899999999998884    3677777777 467999999999997     567766654


Q ss_pred             cCHHHHHhcCeeEEEEeccCCeEEE-EeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHHHHHHHHH
Q 009464          328 VDTVAKSIGAVNCIIRRQSDGKLFG-YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKA  405 (534)
Q Consensus       328 ~~~~A~~iGAvNTi~~~~~~g~l~G-~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~graia~~L~~  405 (534)
                       +..+.-+..+|+-..-  .|...| .+++..|++..|++.           +.+++||+++|+|+|+ +|+.++..|..
T Consensus       117 -~KDVDg~~~~N~g~l~--~g~~~g~~PcTp~gv~~lL~~~-----------~i~l~Gk~vvVvGrs~iVG~p~A~lL~~  182 (285)
T 3p2o_A          117 -SKDVDGFHPINVGYLN--LGLESGFLPCTPLGVMKLLKAY-----------EIDLEGKDAVIIGASNIVGRPMATMLLN  182 (285)
T ss_dssp             -GGCTTCCSHHHHHHHH--TTCCSSCCCHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHHHHHHHHH
T ss_pred             -ccccccCCHhhhhhhh--cCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCchHHHHHHHHHHH
Confidence             4445555666654322  233333 788999999998753           3578999999999987 69999999999


Q ss_pred             CCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          406 KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       406 ~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                      .|++|++++|+....+                 + ....+|+||+++|..   .    .+..++++++.+|+|+.+++
T Consensus       183 ~gAtVtv~h~~t~~L~-----------------~-~~~~ADIVI~Avg~p---~----~I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          183 AGATVSVCHIKTKDLS-----------------L-YTRQADLIIVAAGCV---N----LLRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             TTCEEEEECTTCSCHH-----------------H-HHTTCSEEEECSSCT---T----CBCGGGSCTTEEEEECCCEE
T ss_pred             CCCeEEEEeCCchhHH-----------------H-HhhcCCEEEECCCCC---C----cCCHHHcCCCeEEEEeccCc
Confidence            9999999997643221                 1 234589999999742   1    36788999999999999886

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=99.29  E-value=9e-12  Score=124.23  Aligned_cols=225  Identities=19%  Similarity=0.176  Sum_probs=155.8

Q ss_pred             EEEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchH-----HHHhhccc
Q 009464          258 VFGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHK-----EAAVKCCD  326 (534)
Q Consensus       258 ~~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~ld  326 (534)
                      ..-++| +|-+++-- ..-.+.++++|++..+..++-    +++.+.++.+ .++++.|+.|.+|+.     +.++..++
T Consensus        41 avilvg~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~  119 (300)
T 4a26_A           41 ASIIVGQRMDSKKYV-QLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIH  119 (300)
T ss_dssp             EEEEESCCHHHHHHH-HHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSC
T ss_pred             EEEEeCCCHHHHHHH-HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCC
Confidence            344567 55555433 234567899999999998854    3677777777 467999999999998     67777776


Q ss_pred             ccCHHHHHhcCeeEEEEeccCC-eEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHHHHHHHH
Q 009464          327 EVDTVAKSIGAVNCIIRRQSDG-KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAK  404 (534)
Q Consensus       327 ~~~~~A~~iGAvNTi~~~~~~g-~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~graia~~L~  404 (534)
                      - +..+.-+..+|+-..-. ++ .-.-.+++-.|++..|++.           +.+++||+++|+|+|+ +|+.++..|.
T Consensus       120 p-~KDVDG~~~~N~G~l~~-g~~~~~~~PcTp~gv~~lL~~~-----------~i~l~Gk~vvVIG~s~iVG~p~A~lL~  186 (300)
T 4a26_A          120 P-HKDADALLPVNVGLLHY-KGREPPFTPCTAKGVIVLLKRC-----------GIEMAGKRAVVLGRSNIVGAPVAALLM  186 (300)
T ss_dssp             G-GGCTTCCSHHHHHHHHC-TTCCCSCCCHHHHHHHHHHHHH-----------TCCCTTCEEEEECCCTTTHHHHHHHHH
T ss_pred             c-ccccccCCcceEEEeec-CCCcCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCchHHHHHHHHHH
Confidence            5 55566666777653220 11 1112688889999988763           3578999999999988 7999999999


Q ss_pred             HCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC
Q 009464          405 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK  484 (534)
Q Consensus       405 ~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~  484 (534)
                      ..|++|++++|.....+ +              .+ ....+|+||+++|..   .    .+..++++++.+|+|+.+++.
T Consensus       187 ~~gAtVtv~~~~T~~l~-l--------------~~-~~~~ADIVI~Avg~p---~----~I~~~~vk~GavVIDvgi~~~  243 (300)
T 4a26_A          187 KENATVTIVHSGTSTED-M--------------ID-YLRTADIVIAAMGQP---G----YVKGEWIKEGAAVVDVGTTPV  243 (300)
T ss_dssp             HTTCEEEEECTTSCHHH-H--------------HH-HHHTCSEEEECSCCT---T----CBCGGGSCTTCEEEECCCEEE
T ss_pred             HCCCeEEEEeCCCCCch-h--------------hh-hhccCCEEEECCCCC---C----CCcHHhcCCCcEEEEEeccCC
Confidence            99999999998433222 0              01 123579999999852   1    367889999999999998752


Q ss_pred             -------------hhHHHHHHHHCCCeE--ecc------HHHHHHHHHHHHHHhcCC
Q 009464          485 -------------ITRLLREAEESGATI--VSG------LEMFIGQAYEQYERFTGL  520 (534)
Q Consensus       485 -------------~T~ll~~A~~~G~~i--i~G------l~ml~~Qa~~qf~lwtg~  520 (534)
                                   +..| ..+++.-..+  ++|      ..||+.+.+.+.+.|.+.
T Consensus       244 ~~~~~~~g~kl~GDVdf-~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~~~  299 (300)
T 4a26_A          244 PDPSRKDGYRLVGDVCF-EEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAALGV  299 (300)
T ss_dssp             SCSCSTTSCEEECSBCH-HHHTTTCSEEECTTTSSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCCcccCCceeecCccH-HHHHhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHhcC
Confidence                         2234 3344432222  232      378888888888887653

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=99.15  E-value=8.7e-13  Score=140.67  Aligned_cols=134  Identities=18%  Similarity=0.284  Sum_probs=101.0

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cc--ccc---ccccccCCCCceEEEEcCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSL---ADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~--~~~---~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      +++++|+|+|++|++++.+|++.|++|++++|+.++++++++.++. ..  .++   +++.+ ....+|+|||++|.++.
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~-~l~~~DvVIn~a~~~~~   81 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDA-EVAKHDLVISLIPYTFH   81 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHH-HHTTSSEEEECCC--CH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHH-HHcCCcEEEECCccccc
Confidence            5789999999999999999999999999999999999888765532 11  122   22323 23478999999997654


Q ss_pred             CCCCCCCCCccccCCCCEEEEEe-cCCChhHHHHHHHHCCCeEeccHHH-----------HHHHH------HHHHHHhcC
Q 009464          458 PKVDETPIPKHALGHYALVFDAV-YTPKITRLLREAEESGATIVSGLEM-----------FIGQA------YEQYERFTG  519 (534)
Q Consensus       458 ~~~~~~~i~~~~l~~~~~v~Dv~-y~p~~T~ll~~A~~~G~~ii~Gl~m-----------l~~Qa------~~qf~lwtg  519 (534)
                      +.     +....+..+..++|.+ |.|..+++++.|+++|+.+++|+.|           +++|+      +.+|++|+|
T Consensus        82 ~~-----i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li~q~~~~gg~i~~~~~~~G  156 (450)
T 1ff9_A           82 AT-----VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCG  156 (450)
T ss_dssp             HH-----HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred             hH-----HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHHHHhcccCCeeeEEEEEEc
Confidence            31     3334455555666665 4677899999999999999999999           88998      777889998


Q ss_pred             CCCC
Q 009464          520 LPAP  523 (534)
Q Consensus       520 ~~~p  523 (534)
                      ..+|
T Consensus       157 ~~p~  160 (450)
T 1ff9_A          157 GLPA  160 (450)
T ss_dssp             EEEC
T ss_pred             ccCc
Confidence            6554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=99.13  E-value=2e-10  Score=116.01  Aligned_cols=132  Identities=21%  Similarity=0.237  Sum_probs=104.0

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.+++++|+|+|++|+++++.|...|++|++++|+.++.+.+.+ ++.......++.+ ....+|+||+++|.++...
T Consensus       153 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~~~~~l~~-~l~~aDvVi~~~p~~~i~~  230 (300)
T 2rir_A          153 YTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLVPFHTDELKE-HVKDIDICINTIPSMILNQ  230 (300)
T ss_dssp             SCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCEEEEGGGHHH-HSTTCSEEEECCSSCCBCH
T ss_pred             CCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCeEEchhhHHH-HhhCCCEEEECCChhhhCH
Confidence            4678999999999999999999999999999999999988766543 4433222344444 3467899999999754311


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEe--ccHHHHHHHHHHHHHHhcC
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV--SGLEMFIGQAYEQYERFTG  519 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii--~Gl~ml~~Qa~~qf~lwtg  519 (534)
                         .  ....++++.+++|+.+.|..+.+ +.+++.|+.++  +|+.+.+.|+...+.+|..
T Consensus       231 ---~--~~~~mk~g~~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~~g~v~~a~a~~l~~~~  286 (300)
T 2rir_A          231 ---T--VLSSMTPKTLILDLASRPGGTDF-KYAEKQGIKALLAPGLPGIVAPKTAGQILANV  286 (300)
T ss_dssp             ---H--HHTTSCTTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCHHHHHCHHHHHHHHHHH
T ss_pred             ---H--HHHhCCCCCEEEEEeCCCCCcCH-HHHHHCCCEEEECCCCCCcHHHHHHHHHHHHH
Confidence               1  12346778899999999988877 88888999865  9999999999999999853

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=99.04  E-value=1.4e-10  Score=117.83  Aligned_cols=141  Identities=18%  Similarity=0.135  Sum_probs=108.0

Q ss_pred             CCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHH
Q 009464          347 DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELA  424 (534)
Q Consensus       347 ~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~-G~-~v~i~~R~~~~a~~la  424 (534)
                      .+.+.|+|||..|++.+.  .+.           ....+++.|+|+|.+|++++.+|.+. |. +|+++||+.+++++++
T Consensus       111 ~~~lt~~rT~a~~~la~~--~la-----------~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~  177 (312)
T 2i99_A          111 GNVITAKRTAAVSAIATK--FLK-----------PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFA  177 (312)
T ss_dssp             CHHHHHHHHHHHHHHHHH--HHS-----------CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHH--HhC-----------CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Confidence            567899999999999873  232           23467899999999999999999876 87 9999999999999999


Q ss_pred             HHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEE-ecCCChhHHHHHHHHCCCeEeccH
Q 009464          425 ETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA-VYTPKITRLLREAEESGATIVSGL  503 (534)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv-~y~p~~T~ll~~A~~~G~~ii~Gl  503 (534)
                      +.++......+++.+ ....+|+||++|+.. .     ..+...+++++..++|+ .|.|..+++.+.++++|+.++++.
T Consensus       178 ~~~~~~~~~~~~~~e-~v~~aDiVi~atp~~-~-----~v~~~~~l~~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~~  250 (312)
T 2i99_A          178 DTVQGEVRVCSSVQE-AVAGADVIITVTLAT-E-----PILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQ  250 (312)
T ss_dssp             HHSSSCCEECSSHHH-HHTTCSEEEECCCCS-S-----CCBCGGGSCTTCEEEECCCCSTTCCSBCHHHHHHSEEEESCH
T ss_pred             HHhhCCeEEeCCHHH-HHhcCCEEEEEeCCC-C-----cccCHHHcCCCcEEEeCCCCCCCceeccHHHHhcCEEEECCH
Confidence            887521112233333 234589999999842 1     12334678888999998 688888889899999999999998


Q ss_pred             HHHH
Q 009464          504 EMFI  507 (534)
Q Consensus       504 ~ml~  507 (534)
                      ++-.
T Consensus       251 ~~a~  254 (312)
T 2i99_A          251 EAAL  254 (312)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7543

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=98.98  E-value=4.7e-10  Score=114.43  Aligned_cols=135  Identities=16%  Similarity=0.090  Sum_probs=103.6

Q ss_pred             CCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHH
Q 009464          347 DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELA  424 (534)
Q Consensus       347 ~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~-~G~-~v~i~~R~~~~a~~la  424 (534)
                      .+.++++||++.|++.+..  +..           ...++++|+|+|++|+.++.+|.+ .+. +|.++||+.+++++++
T Consensus       101 ~~~lt~~RTaa~s~laa~~--la~-----------~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la  167 (322)
T 1omo_A          101 ATYTTSLRTGAAGGIAAKY--LAR-----------KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFV  167 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHHH--HSC-----------TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHh--ccC-----------CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHH
Confidence            4568889999999988752  321           246799999999999999999987 455 8999999999999999


Q ss_pred             HHHcC---cccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEE-ecCCChhHHHHHHHHCCCeEe
Q 009464          425 ETVGG---HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA-VYTPKITRLLREAEESGATIV  500 (534)
Q Consensus       425 ~~~~~---~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv-~y~p~~T~ll~~A~~~G~~ii  500 (534)
                      +.++.   ... .+++.+ .. ++|+||+|||.+. |     .+...+++++..++|+ .|.|..+++-....+++..++
T Consensus       168 ~~~~~~~~~~~-~~~~~e-~v-~aDvVi~aTp~~~-p-----v~~~~~l~~G~~V~~ig~~~p~~~el~~~~~~~a~v~v  238 (322)
T 1omo_A          168 SYCEDRGISAS-VQPAEE-AS-RCDVLVTTTPSRK-P-----VVKAEWVEEGTHINAIGADGPGKQELDVEILKKAKIVV  238 (322)
T ss_dssp             HHHHHTTCCEE-ECCHHH-HT-SSSEEEECCCCSS-C-----CBCGGGCCTTCEEEECSCCSTTCCCBCHHHHHTEEEEE
T ss_pred             HHHHhcCceEE-ECCHHH-Hh-CCCEEEEeeCCCC-c-----eecHHHcCCCeEEEECCCCCCCccccCHHHHhcCeEEE
Confidence            88752   222 444545 44 7999999999642 1     2445788899999999 899987777666666666677


Q ss_pred             ccH
Q 009464          501 SGL  503 (534)
Q Consensus       501 ~Gl  503 (534)
                      +-.
T Consensus       239 D~~  241 (322)
T 1omo_A          239 DDL  241 (322)
T ss_dssp             SCH
T ss_pred             CCH
Confidence            754

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.93  E-value=3e-09  Score=106.96  Aligned_cols=120  Identities=23%  Similarity=0.274  Sum_probs=93.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.+++++|+|+|++|++++..|...|++|++++|+.++.+.+. +++....+++++.+ ....+|+|++++|.++...
T Consensus       151 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~~~~~l~~-~l~~aDvVi~~~p~~~i~~  228 (293)
T 3d4o_A          151 FTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGMEPFHISKAAQ-ELRDVDVCINTIPALVVTA  228 (293)
T ss_dssp             SCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSEEEEGGGHHH-HTTTCSEEEECCSSCCBCH
T ss_pred             CCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCeecChhhHHH-HhcCCCEEEECCChHHhCH
Confidence            357899999999999999999999999999999999998766554 44444333344444 3567899999998754311


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEe--ccHHHHH
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV--SGLEMFI  507 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii--~Gl~ml~  507 (534)
                         .  ....++++.+++|+.+.|..+.+ +.+++.|+.++  +|+.+.+
T Consensus       229 ---~--~l~~mk~~~~lin~ar~~~~~~~-~~a~~~Gv~~~~~~~l~~~v  272 (293)
T 3d4o_A          229 ---N--VLAEMPSHTFVIDLASKPGGTDF-RYAEKRGIKALLVPGLPGIV  272 (293)
T ss_dssp             ---H--HHHHSCTTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCHHHHH
T ss_pred             ---H--HHHhcCCCCEEEEecCCCCCCCH-HHHHHCCCEEEECCCCCccc
Confidence               1  12345778899999999988887 88888998875  9999998

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.88  E-value=4.3e-10  Score=110.73  Aligned_cols=121  Identities=18%  Similarity=0.218  Sum_probs=81.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      .+|+||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++.   .+.    .++.+   +.++      ..
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999 799999999999999999999999999999988874   221    12211   1110      35


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEeccHH
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSGLE  504 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~Gl~  504 (534)
                      +..|++||++++... ......++.+.|   ..++|+|....   ...+++.++++| .+|||-.+
T Consensus        83 G~iDiLVNNAGi~~~-~~~~~~~~~e~~---~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS  144 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDG-VTPVAEVSDELW---ERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTAS  144 (254)
T ss_dssp             SCCCEEEECCCCCCT-TCCGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCCEEEECCcccCC-CCChhhCCHHHH---HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEec
Confidence            679999999986421 111122333333   45778876533   345666666543 46776443

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=98.81  E-value=1.9e-09  Score=111.14  Aligned_cols=140  Identities=14%  Similarity=0.039  Sum_probs=102.2

Q ss_pred             CCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHH
Q 009464          347 DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELA  424 (534)
Q Consensus       347 ~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~-~G~-~v~i~~R~~~~a~~la  424 (534)
                      ++.|+|+|||+.|++.+..  +.           ....+++.|+|+|++|++++.+|.. .+. +|+++||+.+++++++
T Consensus       105 ~~~lT~~RTaa~s~laa~~--la-----------~~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la  171 (350)
T 1x7d_A          105 LTIATALRTAATSLMAAQA--LA-----------RPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLI  171 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHHH--HS-----------CTTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHH
T ss_pred             CCEEEeehhhHHHHHHHHH--hc-----------cccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Confidence            5679999999999999863  32           1246899999999999999998764 466 8999999999999999


Q ss_pred             HHHcC----cccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEe-cCCChhHHHHHHHHCCCeE
Q 009464          425 ETVGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV-YTPKITRLLREAEESGATI  499 (534)
Q Consensus       425 ~~~~~----~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~-y~p~~T~ll~~A~~~G~~i  499 (534)
                      +.+..    .....+++.+ ....+|+||+||+.+..    ...+..++++++..+.++- |.|....+-....+++..+
T Consensus       172 ~~~~~~~g~~~~~~~~~~e-av~~aDiVi~aTps~~~----~pvl~~~~l~~G~~V~~vgs~~p~~~El~~~~~~~a~v~  246 (350)
T 1x7d_A          172 ANLKEYSGLTIRRASSVAE-AVKGVDIITTVTADKAY----ATIITPDMLEPGMHLNAVGGDCPGKTELHADVLRNARVF  246 (350)
T ss_dssp             HHHTTCTTCEEEECSSHHH-HHTTCSEEEECCCCSSE----EEEECGGGCCTTCEEEECSCCBTTBEEECHHHHHTSEEE
T ss_pred             HHHHhccCceEEEeCCHHH-HHhcCCEEEEeccCCCC----CceecHHHcCCCCEEEECCCCCCCceeeCHHHHhcCcEE
Confidence            98842    1222333333 33568999999997631    1124557888888888886 4566555555666677678


Q ss_pred             eccHH
Q 009464          500 VSGLE  504 (534)
Q Consensus       500 i~Gl~  504 (534)
                      ++-.+
T Consensus       247 vD~~~  251 (350)
T 1x7d_A          247 VEYEP  251 (350)
T ss_dssp             ESSHH
T ss_pred             ECCHH
Confidence            88654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.81  E-value=8.2e-10  Score=108.81  Aligned_cols=120  Identities=25%  Similarity=0.268  Sum_probs=81.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc----------ccccC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD----------LENFN  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~----------~~~~~  441 (534)
                      .+|+||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   +.    .++.+          +.+ .
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-~   83 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA-E   83 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH-T
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-H
Confidence            4689999999999 7999999999999999999999999999998887742   11    12211          112 4


Q ss_pred             CCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHH--CCCeEeccHHH
Q 009464          442 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEE--SGATIVSGLEM  505 (534)
Q Consensus       442 ~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~--~G~~ii~Gl~m  505 (534)
                      .+..|++||++++....  ....++.+.|   ..++|+|....   ...+++.+++  .|.+|||-.++
T Consensus        84 ~G~iDiLVNNAG~~~~~--~~~~~~~e~~---~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~  147 (255)
T 4g81_D           84 GIHVDILINNAGIQYRK--PMVELELENW---QKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL  147 (255)
T ss_dssp             TCCCCEEEECCCCCCCC--CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             CCCCcEEEECCCCCCCC--ChhhCCHHHH---HHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh
Confidence            67899999999875321  1122333333   55778876532   2345666643  34577764433

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.80  E-value=4e-09  Score=94.35  Aligned_cols=92  Identities=20%  Similarity=0.234  Sum_probs=74.1

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  463 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~  463 (534)
                      +++++|+|+|++|++++..|.+.|++|++++|+.+++++++++++......+++.+ ....+|+||++||... +     
T Consensus        21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~Divi~at~~~~-~-----   93 (144)
T 3oj0_A           21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDS-LIKNNDVIITATSSKT-P-----   93 (144)
T ss_dssp             CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHH-HHHTCSEEEECSCCSS-C-----
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHH-HhcCCCEEEEeCCCCC-c-----
Confidence            78999999999999999999999999999999999999999998754434444443 3346899999998652 1     


Q ss_pred             CCCccccCCCCEEEEEecC
Q 009464          464 PIPKHALGHYALVFDAVYT  482 (534)
Q Consensus       464 ~i~~~~l~~~~~v~Dv~y~  482 (534)
                      .+...+++++..++|+...
T Consensus        94 ~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           94 IVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             SBCGGGCCTTCEEEECCSS
T ss_pred             EeeHHHcCCCCEEEEccCC
Confidence            2445778888999999863

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.68  E-value=4.5e-09  Score=102.99  Aligned_cols=118  Identities=15%  Similarity=0.163  Sum_probs=78.4

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---cccccc---cccc------CCCCceEEEE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---ALSLAD---LENF------NPEDGMILAN  450 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~~~~~~---~~~~------~~~~~divVn  450 (534)
                      +|+|||+|+ +|+|+++|..|++.|++|++++|+.+++++++++....   ..++.+   +.++      ..+..|++||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            489999999 79999999999999999999999999998887765321   112211   1110      3467999999


Q ss_pred             cCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCeEeccHHHH
Q 009464          451 TTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       451 ~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                      +++++...  ....++.+.|   ..++|+|....   ...+++.+++.+..+||-.++.
T Consensus        82 NAG~~~~~--~~~~~~~e~~---~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~  135 (247)
T 3ged_A           82 NACRGSKG--ILSSLLYEEF---DYILSVGLKAPYELSRLCRDELIKNKGRIINIASTR  135 (247)
T ss_dssp             CCCCCCCC--GGGTCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred             CCCCCCCC--CcccCCHHHH---HHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecc
Confidence            99876421  1122333333   45777776432   2345556666666777754443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.68  E-value=3.8e-08  Score=97.78  Aligned_cols=76  Identities=32%  Similarity=0.375  Sum_probs=61.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc----cccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL----SLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~----~~~~---~~~~------~~~~~d  446 (534)
                      .|+||++||+|+ +|+|+++|..|++.|++|++++|+.+++++++++++.+..    ++.+   +.++      ..+..|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999 7999999999999999999999999999999999875431    2211   1110      356799


Q ss_pred             EEEEcCCCCC
Q 009464          447 ILANTTSIGM  456 (534)
Q Consensus       447 ivVn~t~~g~  456 (534)
                      ++||+++.+.
T Consensus       106 iLVNNAG~~~  115 (273)
T 4fgs_A          106 VLFVNAGGGS  115 (273)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCCCCC
Confidence            9999998753

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.68  E-value=7.4e-09  Score=101.29  Aligned_cols=122  Identities=26%  Similarity=0.345  Sum_probs=77.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHcCcc----ccccc---ccc-cCCCCceEEE
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHA----LSLAD---LEN-FNPEDGMILA  449 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~~~~----~~~~~---~~~-~~~~~~divV  449 (534)
                      .+|+||+++|+|+ +|+|+++|..|+++|++|++++|+.+ ++.+..++.+.+.    .++.+   ..+ +..+..|++|
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV   84 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV   84 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            4689999999999 79999999999999999999999853 3333333433322    22222   111 1345789999


Q ss_pred             EcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC--CCeEeccHHHH
Q 009464          450 NTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES--GATIVSGLEMF  506 (534)
Q Consensus       450 n~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~--G~~ii~Gl~ml  506 (534)
                      |++++....  ....++++.|   ..++|+|....   ...+++.++++  +.+|||-.++.
T Consensus        85 NNAGi~~~~--~~~~~~~~~w---~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~  141 (247)
T 4hp8_A           85 NNAGIIRRA--DSVEFSELDW---DEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLL  141 (247)
T ss_dssp             ECCCCCCCC--CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             ECCCCCCCC--CcccccHHHH---HHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechh
Confidence            999875321  1222333333   55788886533   23456666554  45788755443

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.55  E-value=1.2e-08  Score=100.63  Aligned_cols=123  Identities=15%  Similarity=0.075  Sum_probs=77.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH--HHcCcc----ccccc---cccc------CCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE--TVGGHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~--~~~~~~----~~~~~---~~~~------~~~  443 (534)
                      .+++||+++|+|+ +|+|+++|..|++.|++|++++|+.++.+.+.+  +.+.+.    +++.+   +.++      ..+
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4688999999999 799999999999999999999998765433321  122221    12211   1110      356


Q ss_pred             CceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCeEeccHHHHHH
Q 009464          444 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGATIVSGLEMFIG  508 (534)
Q Consensus       444 ~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii~Gl~ml~~  508 (534)
                      ..|++||++++...+   ....+.+.|   ..++|++....   ...+++.+++.|..|||-.++...
T Consensus        83 ~iDiLVNnAGi~~~~---~~~~~~e~~---~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~  144 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGI---GLDAGRDAF---VASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAV  144 (258)
T ss_dssp             CCCEEEECCCCCCCC---CTTSCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHH
T ss_pred             CCCEEEECCCCCCCC---CccCCHHHH---HHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhc
Confidence            899999999875322   122233333   34667765422   234556666666688886665543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.53  E-value=2.6e-09  Score=104.25  Aligned_cols=116  Identities=20%  Similarity=0.183  Sum_probs=74.6

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH-cCccccccc---c---cccCCCCceEEEEcCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHALSLAD---L---ENFNPEDGMILANTTS  453 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~-~~~~~~~~~---~---~~~~~~~~divVn~t~  453 (534)
                      ++||+++|+|+ +|+|++++..|+++|++|++++|+.+++++....- .....++.+   +   -+ ..++.|++||+++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~-~~g~iDiLVNNAG   87 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFE-ALPRLDVLVNNAG   87 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHH-HCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHH-hcCCCCEEEECCC
Confidence            68999999999 79999999999999999999999987654321100 000112211   1   12 4578999999998


Q ss_pred             CCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCeEeccHHH
Q 009464          454 IGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGATIVSGLEM  505 (534)
Q Consensus       454 ~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii~Gl~m  505 (534)
                      +.. |   ...++.+.|   ..++|+|....   ...+++.++++|.+|||-.++
T Consensus        88 i~~-~---~~~~~~~~w---~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           88 ISR-D---REEYDLATF---ERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             CCC-G---GGGGSHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             CCC-C---cccCCHHHH---HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            742 2   122333333   45777776432   234555666667778875444

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=98.51  E-value=3.1e-07  Score=90.38  Aligned_cols=174  Identities=13%  Similarity=0.113  Sum_probs=111.7

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchHHHHhhcccccCHHH
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  332 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K~~v~~~ld~~~~~A  332 (534)
                      .-++| +|-+++-- ..-.+..++.|+ .....++-    +++.+.++.+ .++++.|+-|-.|+-..+    |+    -
T Consensus        32 vilvg~dpaS~~Yv-~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~D~~v~GIlvqlPLP~~i----d~----~  101 (276)
T 3ngx_A           32 LIQIGDNEAASIYA-RAKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKDPQINGIMIENPLPKGF----DY----Y  101 (276)
T ss_dssp             EEEESCCHHHHHHH-HHHHHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTC----CH----H
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC----CH----H
Confidence            33566 55544433 233557789999 77666553    2565666666 578999999999963211    10    1


Q ss_pred             HHhcCeeEEEEeccCCeEEEEe-------------ccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHH
Q 009464          333 KSIGAVNCIIRRQSDGKLFGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKA  398 (534)
Q Consensus       333 ~~iGAvNTi~~~~~~g~l~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~gra  398 (534)
                      +.+.+++.-.--  || ++-+|             .--.|++..|++.            . ++||+++|+|+|+ +|+.
T Consensus       102 ~v~~~I~p~KDV--DG-~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~------------~-l~Gk~vvVvG~s~iVG~p  165 (276)
T 3ngx_A          102 EIVRNIPYYKDV--DA-LSPYNQGLIALNREFLVPATPRAVIDIMDYY------------G-YHENTVTIVNRSPVVGRP  165 (276)
T ss_dssp             HHHTTSCGGGBT--TC-CSHHHHHHHHTTCCSSCCHHHHHHHHHHHHH------------T-CCSCEEEEECCCTTTHHH
T ss_pred             HHHhhCCCCCcc--cC-CCccchhhhhcCCCCCCCCcHHHHHHHHHHh------------C-cCCCEEEEEcCChHHHHH
Confidence            111222111000  11 11111             1126777777652            2 7899999999987 7999


Q ss_pred             HHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEE
Q 009464          399 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  478 (534)
Q Consensus       399 ia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~D  478 (534)
                      ++..|...|++|++++|.....++.                  ...+|+||+++|.   |.    .+..++++++.+|+|
T Consensus       166 lA~lL~~~gAtVtv~~~~t~~L~~~------------------~~~ADIVI~Avg~---p~----~I~~~~vk~GavVID  220 (276)
T 3ngx_A          166 LSMMLLNRNYTVSVCHSKTKDIGSM------------------TRSSKIVVVAVGR---PG----FLNREMVTPGSVVID  220 (276)
T ss_dssp             HHHHHHHTTCEEEEECTTCSCHHHH------------------HHHSSEEEECSSC---TT----CBCGGGCCTTCEEEE
T ss_pred             HHHHHHHCCCeEEEEeCCcccHHHh------------------hccCCEEEECCCC---Cc----cccHhhccCCcEEEE
Confidence            9999999999999998754322221                  2347999999974   21    367789999999999


Q ss_pred             EecCC
Q 009464          479 AVYTP  483 (534)
Q Consensus       479 v~y~p  483 (534)
                      +.+++
T Consensus       221 vgi~~  225 (276)
T 3ngx_A          221 VGINY  225 (276)
T ss_dssp             CCCEE
T ss_pred             eccCc
Confidence            99887

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=98.45  E-value=7.6e-08  Score=97.19  Aligned_cols=240  Identities=13%  Similarity=0.100  Sum_probs=132.6

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccccc-HHHHHHHh-cCCCCCEEEeccchHH-----HHhhcc-----
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD-IAKFFQTY-SSNDFAGFSCTIPHKE-----AAVKCC-----  325 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~-~~~~~~~~-~~~~~~G~~VT~P~K~-----~v~~~l-----  325 (534)
                      .-++| +|-+++-- ..-.+..++.|++.....++-++ +.+.++.+ .++++.|+-|-.|.-.     .++..+     
T Consensus        41 vilvg~dpas~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~~l~~~i~~lN~d~~v~GIlvqlPlp~~~~~~~i~~~I~p~KD  119 (320)
T 1edz_A           41 GFLANNDPAAKMYA-TWTQKTSESMGFRYDLRVIEDKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKD  119 (320)
T ss_dssp             EEECCCCHHHHHHH-HHHHHHHHHHTCEEEEEECSSGGGHHHHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTB
T ss_pred             EEEECCchhHHHHH-HHHHHHHHHcCCEEEEEECCChHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccc
Confidence            33556 33333222 23355789999998877776644 87778777 5889999999998632     222221     


Q ss_pred             -cccCHH--HHHhcCeeEEEEeccCCeEEEE-eccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchh-HHHHH
Q 009464          326 -DEVDTV--AKSIGAVNCIIRRQSDGKLFGY-NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA-GKALA  400 (534)
Q Consensus       326 -d~~~~~--A~~iGAvNTi~~~~~~g~l~G~-NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~-graia  400 (534)
                       |-+++.  .+..--..-+...  ++ -.++ ----.|++..|++. .- -+..=+.+.++.+++++|+|+|.+ |+.+|
T Consensus       120 VDG~~~~n~g~l~~~~~~l~~~--~~-~~~~~PcTp~a~v~ll~~~-~~-~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A  194 (320)
T 1edz_A          120 VEGLNHVYYQNLYHNVRYLDKE--NR-LKSILPCTPLAIVKILEFL-KI-YNNLLPEGNRLYGKKCIVINRSEIVGRPLA  194 (320)
T ss_dssp             TTCCSHHHHHHHHTTCCBSSSS--SC-SBCCCCHHHHHHHHHHHHT-TC-SCTTSCTTCTTTTCEEEEECCCTTTHHHHH
T ss_pred             cCcCChhhhHHHhcCCcccccc--cc-CCCcCCCcHHHHHHHHHhh-cc-cccccccCCCCCCCEEEEECCCcchHHHHH
Confidence             222221  0100000000000  00 0000 01136666666541 00 000000134789999999999976 99999


Q ss_pred             HHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccc--------ccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCC
Q 009464          401 YGAKAKGARVVIANRTYDRARELAETVGGHALSL--------ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGH  472 (534)
Q Consensus       401 ~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~--------~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~  472 (534)
                      ..|...|++|+++||+..+..+.+..+.......        +++.+ ....+|+||++|+..   .   .-+..+++++
T Consensus       195 ~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e-~l~~ADIVIsAtg~p---~---~vI~~e~vk~  267 (320)
T 1edz_A          195 ALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKK-CSLDSDVVITGVPSE---N---YKFPTEYIKE  267 (320)
T ss_dssp             HHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHH-HHHHCSEEEECCCCT---T---CCBCTTTSCT
T ss_pred             HHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHH-HhccCCEEEECCCCC---c---ceeCHHHcCC
Confidence            9999999999999998433222222222211111        34444 445689999999852   1   1267788899


Q ss_pred             CCEEEEEecCCChhHHHHHHHHC-CCeEecc-----HHHHHHHHHHHHH
Q 009464          473 YALVFDAVYTPKITRLLREAEES-GATIVSG-----LEMFIGQAYEQYE  515 (534)
Q Consensus       473 ~~~v~Dv~y~p~~T~ll~~A~~~-G~~ii~G-----l~ml~~Qa~~qf~  515 (534)
                      +.+++|+......-   ..+++. ++ +.++     ..||+...+.+++
T Consensus       268 GavVIDVgi~rD~d---~~v~~~a~~-itPvVGpmT~a~Ll~n~~~a~~  312 (320)
T 1edz_A          268 GAVCINFACTKNFS---DDVKEKASL-YVPMTGKVTIAMLLRNMLRLVR  312 (320)
T ss_dssp             TEEEEECSSSCCBC---GGGGTTEEE-EESCCHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEcCCCcccc---hhHHhhCCe-eCCCccHHHHHHHHHHHHHHHH
Confidence            99999998654210   122222 22 3333     3677766666654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=98.44  E-value=9.4e-09  Score=101.63  Aligned_cols=116  Identities=14%  Similarity=0.085  Sum_probs=71.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc--Cccccccc-------ccccCCCCceEEE
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHALSLAD-------LENFNPEDGMILA  449 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~--~~~~~~~~-------~~~~~~~~~divV  449 (534)
                      .+++||+++|+|+ +|+|+++|..|+++|++|++++|+.++.  +.+.+.  .+..+.++       +.+ ..+..|++|
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~G~iDilV   83 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LPEELFVEADLTTKEGCAIVAEATRQ-RLGGVDVIV   83 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SCTTTEEECCTTSHHHHHHHHHHHHH-HTSSCSEEE
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CCcEEEEEcCCCCHHHHHHHHHHHHH-HcCCCCEEE
Confidence            4689999999999 7999999999999999999999975431  111111  11111111       112 457899999


Q ss_pred             EcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEec
Q 009464          450 NTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVS  501 (534)
Q Consensus       450 n~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~  501 (534)
                      |++++..........++.+.|   .-++|+|+...   ...+++.++++| ..+|+
T Consensus        84 nnAG~~~~~~~~~~~~~~e~~---~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~  136 (261)
T 4h15_A           84 HMLGGSSAAGGGFSALSDDDW---YNELSLNLFAAVRLDRQLVPDMVARGSGVVVH  136 (261)
T ss_dssp             ECCCCCCCCSSCGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             ECCCCCccCCCCcccCCHHHH---HHHHHHHhHHHHHHHHhhchhhhhcCCceEEE
Confidence            999875321111122333333   44677776432   235566666543 35554

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.41  E-value=5.7e-08  Score=96.73  Aligned_cols=74  Identities=30%  Similarity=0.399  Sum_probs=58.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----cccccc---ccc------CCCCceE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGMI  447 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~~---~~~------~~~~~di  447 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.++...    .++.+.   .++      ..+..|+
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57899999999 899999999999999999999999999999988775432    122221   110      2357899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      |||++++.
T Consensus        83 lvnnAg~~   90 (281)
T 3zv4_A           83 LIPNAGIW   90 (281)
T ss_dssp             EECCCCCC
T ss_pred             EEECCCcC
Confidence            99999875

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.37  E-value=4e-07  Score=89.43  Aligned_cols=76  Identities=17%  Similarity=0.202  Sum_probs=57.5

Q ss_pred             cccCCcEEEEEcC-c--hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----cc----ccccc---cccc-----
Q 009464          380 SALAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLAD---LENF-----  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-G--G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~----~~~~~---~~~~-----  440 (534)
                      .+++||+++|+|| |  |+|+++|..|+++|++|++++|+.+..+++++.+..    +.    +++.+   +.++     
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3578999999997 4  899999999999999999999998888887776531    11    12211   1110     


Q ss_pred             -CCCCceEEEEcCCCC
Q 009464          441 -NPEDGMILANTTSIG  455 (534)
Q Consensus       441 -~~~~~divVn~t~~g  455 (534)
                       ..+..|++||++++.
T Consensus        82 ~~~G~iD~lvnnAg~~   97 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFA   97 (256)
T ss_dssp             HHHCCCSEEEECCCCC
T ss_pred             HHhCCCCEEEeccccc
Confidence             346799999999865

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=98.34  E-value=1.2e-05  Score=79.70  Aligned_cols=214  Identities=16%  Similarity=0.191  Sum_probs=134.4

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchH-----HHHhhcc--
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHK-----EAAVKCC--  325 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~l--  325 (534)
                      .-++| +|-+++-- ..-.+..++.|++.....++-    +++.+.++.+ .++++.|+-|-.|+-     ..++..+  
T Consensus        38 vilvG~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p  116 (288)
T 1b0a_A           38 VVLVGSNPASQIYV-ASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHP  116 (288)
T ss_dssp             EEEESCCHHHHHHH-HHHHHHHHHHTCEECCEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCT
T ss_pred             EEEeCCChhHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCC
Confidence            34566 44444333 233556789999876665543    3566666666 578999999999963     3333322  


Q ss_pred             ----cccCHH--HHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-hHHH
Q 009464          326 ----DEVDTV--AKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKA  398 (534)
Q Consensus       326 ----d~~~~~--A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-~gra  398 (534)
                          |-+++.  .+..---...+           -.--.|++..|++.           +.+++||+++|+|+|+ +|+.
T Consensus       117 ~KDVDG~~p~n~g~l~~g~~~~~-----------PcTp~gi~~ll~~~-----------~i~l~gk~vvVIG~s~iVG~p  174 (288)
T 1b0a_A          117 DKDVDGFHPYNVGRLCQRAPRLR-----------PCTPRGIVTLLERY-----------NIDTFGLNAVVIGASNIVGRP  174 (288)
T ss_dssp             TTCTTCCSHHHHHHHHTTCCSSC-----------CHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHH
T ss_pred             ccCcccCCccchhHHhCCCCCCC-----------CCcHHHHHHHHHHc-----------CCCCCCCEEEEECCChHHHHH
Confidence                222221  01100000000           01145777776542           3578999999999997 5999


Q ss_pred             HHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEE
Q 009464          399 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  478 (534)
Q Consensus       399 ia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~D  478 (534)
                      ++..|...|++|++++++.+..++                  ....+|+||++++..   .    .+..++++++.+++|
T Consensus       175 ~A~lL~~~gAtVtv~hs~t~~L~~------------------~~~~ADIVI~Avg~p---~----lI~~~~vk~GavVID  229 (288)
T 1b0a_A          175 MSMELLLAGCTTTVTHRFTKNLRH------------------HVENADLLIVAVGKP---G----FIPGDWIKEGAIVID  229 (288)
T ss_dssp             HHHHHHTTTCEEEEECSSCSCHHH------------------HHHHCSEEEECSCCT---T----CBCTTTSCTTCEEEE
T ss_pred             HHHHHHHCCCeEEEEeCCchhHHH------------------HhccCCEEEECCCCc---C----cCCHHHcCCCcEEEE
Confidence            999999999999999866532222                  123479999999842   1    367788999999999


Q ss_pred             EecCCC-------hhHHHHHHHHCCCe-Eecc------HHHHHHHHHHHHHHhcCC
Q 009464          479 AVYTPK-------ITRLLREAEESGAT-IVSG------LEMFIGQAYEQYERFTGL  520 (534)
Q Consensus       479 v~y~p~-------~T~ll~~A~~~G~~-ii~G------l~ml~~Qa~~qf~lwtg~  520 (534)
                      +..++.       +..|-...+..++- -++|      ..||+.+.+.+.+.|...
T Consensus       230 Vgi~r~~~g~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~~~  285 (288)
T 1b0a_A          230 VGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDP  285 (288)
T ss_dssp             CCCEECTTSCEECSBCHHHHHHHCSEECCSSSSSHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccCCccCCCCccCCcCHHHHhhhccEecCCCCCccHHHHHHHHHHHHHHHHHhhcc
Confidence            987652       33454444445542 2333      378888888888876543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.33  E-value=6.9e-08  Score=101.41  Aligned_cols=113  Identities=19%  Similarity=0.253  Sum_probs=79.8

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHcC----cc----ccc---ccccccCCC--CceEE
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKG---ARVVIANRTYDRARELAETVGG----HA----LSL---ADLENFNPE--DGMIL  448 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G---~~v~i~~R~~~~a~~la~~~~~----~~----~~~---~~~~~~~~~--~~div  448 (534)
                      ++++|+|+|++|++++..|++.|   .+|++++|+.++++++++.+..    ..    .+.   +++.+ .+.  .+|+|
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~-~l~~~~~DvV   80 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVA-LINEVKPQIV   80 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHH-HHHHHCCSEE
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHH-HHHhhCCCEE
Confidence            47999999999999999999998   3899999999999999988742    11    122   22222 122  37999


Q ss_pred             EEcCCCCCCCCCCCCCCCccccCCCCEEEEE-ecCCC-h--------hHHHHHHHHCCCeEeccH
Q 009464          449 ANTTSIGMQPKVDETPIPKHALGHYALVFDA-VYTPK-I--------TRLLREAEESGATIVSGL  503 (534)
Q Consensus       449 Vn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv-~y~p~-~--------T~ll~~A~~~G~~ii~Gl  503 (534)
                      ||++|...     ..++....++.+..++|+ +|.+. .        ..+.+.|+++|+.++.|.
T Consensus        81 in~ag~~~-----~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~  140 (405)
T 4ina_A           81 LNIALPYQ-----DLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGS  140 (405)
T ss_dssp             EECSCGGG-----HHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECC
T ss_pred             EECCCccc-----ChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcC
Confidence            99997532     123334455666778887 45543 2        268888999998877654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.32  E-value=1.2e-07  Score=93.30  Aligned_cols=75  Identities=25%  Similarity=0.344  Sum_probs=57.8

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .++.+   +.++      ..+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999 8999999999999999999999999999998887631   11    12222   1110      245


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||+++..
T Consensus        88 ~id~lv~nAg~~   99 (264)
T 3ucx_A           88 RVDVVINNAFRV   99 (264)
T ss_dssp             CCSEEEECCCSC
T ss_pred             CCcEEEECCCCC
Confidence            789999999763

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.30  E-value=9.8e-07  Score=86.42  Aligned_cols=76  Identities=24%  Similarity=0.291  Sum_probs=59.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----cccccc---ccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~~---~~~------~~~~~d  446 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++...    .++.+.   .++      ..+..|
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            467899999999 899999999999999999999999999999988875322    122221   110      235789


Q ss_pred             EEEEcCCCCC
Q 009464          447 ILANTTSIGM  456 (534)
Q Consensus       447 ivVn~t~~g~  456 (534)
                      ++||++++..
T Consensus        85 ~lv~nAg~~~   94 (255)
T 4eso_A           85 LLHINAGVSE   94 (255)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCCCCC
Confidence            9999998753

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.29  E-value=1.4e-06  Score=86.38  Aligned_cols=77  Identities=27%  Similarity=0.375  Sum_probs=60.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~  445 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+..
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5678999999999 899999999999999999999999999999988875432    12222   1110      23478


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |+|||++++..
T Consensus       103 D~lv~nAg~~~  113 (277)
T 4dqx_A          103 DVLVNNAGFGT  113 (277)
T ss_dssp             CEEEECCCCCC
T ss_pred             CEEEECCCcCC
Confidence            99999998764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.28  E-value=1.1e-06  Score=85.63  Aligned_cols=75  Identities=35%  Similarity=0.454  Sum_probs=59.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+..|
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID   82 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            467899999999 899999999999999999999999999999988875432    12222   1110      235789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus        83 ~lv~nAg~~   91 (247)
T 3rwb_A           83 ILVNNASIV   91 (247)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999875

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.28  E-value=1.1e-06  Score=85.81  Aligned_cols=78  Identities=31%  Similarity=0.437  Sum_probs=60.7

Q ss_pred             ccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCC
Q 009464          379 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~  444 (534)
                      ...+++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   83 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGK   83 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35678999999999 899999999999999999999999999999998876432    12222   1110      2346


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||++++..
T Consensus        84 id~li~~Ag~~~   95 (261)
T 3n74_A           84 VDILVNNAGIGH   95 (261)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCccCC
Confidence            899999998764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.26  E-value=1.7e-06  Score=84.76  Aligned_cols=75  Identities=29%  Similarity=0.421  Sum_probs=59.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+..|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999999 899999999999999999999999999999988875432    12221   1110      245799


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus        85 ~lv~~Ag~~   93 (259)
T 4e6p_A           85 ILVNNAALF   93 (259)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCcC
Confidence            999999875

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.24  E-value=1.7e-06  Score=86.28  Aligned_cols=77  Identities=30%  Similarity=0.447  Sum_probs=60.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----cccccc---ccc--CCCCceEEE
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF--NPEDGMILA  449 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~~---~~~--~~~~~divV  449 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++...    .++.+.   .++  ..+..|+||
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv   91 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLI   91 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            4678999999999 899999999999999999999999999998887764321    222221   111  235789999


Q ss_pred             EcCCCCC
Q 009464          450 NTTSIGM  456 (534)
Q Consensus       450 n~t~~g~  456 (534)
                      |++++..
T Consensus        92 ~nAg~~~   98 (291)
T 3rd5_A           92 NNAGIMA   98 (291)
T ss_dssp             ECCCCCS
T ss_pred             ECCcCCC
Confidence            9998753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.24  E-value=1.2e-06  Score=85.29  Aligned_cols=76  Identities=29%  Similarity=0.415  Sum_probs=59.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~  445 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++.+....    .++.+   +.++      ..+..
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999999 899999999999999999999999999999988875321    12222   1110      23578


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+|||++++.
T Consensus        85 D~lv~nAg~~   94 (248)
T 3op4_A           85 DILVNNAGIT   94 (248)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.23  E-value=1.5e-06  Score=85.75  Aligned_cols=76  Identities=33%  Similarity=0.461  Sum_probs=60.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~  445 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+..
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999 899999999999999999999999999999988876432    12222   1110      23578


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+|||++++.
T Consensus       103 D~lvnnAg~~  112 (266)
T 3grp_A          103 DILVNNAGIT  112 (266)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.22  E-value=1.8e-06  Score=85.64  Aligned_cols=77  Identities=27%  Similarity=0.292  Sum_probs=59.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----cccccc---ccc------CCCCc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDG  445 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~~---~~~------~~~~~  445 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+.   .++      ..+..
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999 899999999999999999999999999999988875432    122221   110      23578


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |+|||++++..
T Consensus       105 D~lvnnAg~~~  115 (277)
T 3gvc_A          105 DKLVANAGVVH  115 (277)
T ss_dssp             CEEEECCCCCC
T ss_pred             CEEEECCCCCC
Confidence            99999998753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.21  E-value=1.7e-06  Score=84.77  Aligned_cols=75  Identities=25%  Similarity=0.377  Sum_probs=58.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---c----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---A----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~----~~~~~---~~~~------~~~  443 (534)
                      .+++|++||+|+ ||+|++++..|++.|++|++++|+.++++++.+++...   .    .++.+   +.++      ..+
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999999 89999999999999999999999999999998887431   1    12222   1110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus        83 ~id~lv~nAg~~   94 (257)
T 3imf_A           83 RIDILINNAAGN   94 (257)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999865

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.21  E-value=4.5e-07  Score=93.78  Aligned_cols=126  Identities=19%  Similarity=0.252  Sum_probs=88.7

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      +..+|+|+|||.+|+.++..|++ ..+|++++|+.++++++.+....   ++.+.+.+.+ ...+.|+|||++|..+.  
T Consensus        15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~-~~~~~DvVi~~~p~~~~--   90 (365)
T 3abi_A           15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVE-VMKEFELVIGALPGFLG--   90 (365)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHH-HHTTCSEEEECCCGGGH--
T ss_pred             CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHH-HHhCCCEEEEecCCccc--
Confidence            34579999999999999999865 47999999999988776543221   1112223333 34578999999975422  


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCCh-hHHHHHHHHCCCeEeccH-------HHHHHHHHHHHH
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKI-TRLLREAEESGATIVSGL-------EMFIGQAYEQYE  515 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~-T~ll~~A~~~G~~ii~Gl-------~ml~~Qa~~qf~  515 (534)
                         .++....++.+.-++|+.|.+.. ..+-+.|+++|+.++++.       .|++..+..++.
T Consensus        91 ---~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~a~~~~~~~~  151 (365)
T 3abi_A           91 ---FKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQELD  151 (365)
T ss_dssp             ---HHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCBTTTBHHHHHHHHHHHHSC
T ss_pred             ---chHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCCCCCchHHHHHHHHHHhcc
Confidence               13445566777889999998664 466678999999888643       677777777653

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.21  E-value=1.6e-06  Score=85.90  Aligned_cols=75  Identities=28%  Similarity=0.409  Sum_probs=57.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+..|
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999999 899999999999999999999999999999988875322    12222   1110      235789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus       105 ~lVnnAg~~  113 (272)
T 4dyv_A          105 VLFNNAGTG  113 (272)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.21  E-value=4.3e-07  Score=91.14  Aligned_cols=75  Identities=23%  Similarity=0.330  Sum_probs=56.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---C---cc----cccccc---ccc------
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---G---HA----LSLADL---ENF------  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~---~~----~~~~~~---~~~------  440 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   .   ..    .++.+.   .++      
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            467899999999 899999999999999999999999999888877652   1   11    122211   110      


Q ss_pred             CCCCceEEEEcCCCC
Q 009464          441 NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ~~~~~divVn~t~~g  455 (534)
                      ..+..|+|||++++.
T Consensus       103 ~~g~iD~lvnnAG~~  117 (297)
T 1xhl_A          103 KFGKIDILVNNAGAN  117 (297)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             hcCCCCEEEECCCcC
Confidence            134689999999875

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.19  E-value=4.1e-06  Score=80.46  Aligned_cols=73  Identities=25%  Similarity=0.397  Sum_probs=55.4

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----Ccc----ccccc---cccc------CCCCc
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~~----~~~~~---~~~~------~~~~~  445 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.    ...    .++.+   +.++      ..+..
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            689999999 899999999999999999999999999888877653    211    12222   1111      12478


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |+|||++++..
T Consensus        82 d~li~~Ag~~~   92 (235)
T 3l77_A           82 DVVVANAGLGY   92 (235)
T ss_dssp             SEEEECCCCCC
T ss_pred             CEEEECCcccc
Confidence            99999998753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.19  E-value=2.9e-06  Score=82.27  Aligned_cols=77  Identities=25%  Similarity=0.362  Sum_probs=58.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc--CCCCceEEE
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF--NPEDGMILA  449 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~--~~~~~divV  449 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+....    .++.+   +.++  ..+..|+||
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            5678999999999 899999999999999999999999999999988875422    12222   1110  335789999


Q ss_pred             EcCCCCC
Q 009464          450 NTTSIGM  456 (534)
Q Consensus       450 n~t~~g~  456 (534)
                      |++++..
T Consensus        90 ~~Ag~~~   96 (249)
T 3f9i_A           90 CNAGITS   96 (249)
T ss_dssp             ECCC---
T ss_pred             ECCCCCC
Confidence            9998753

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.19  E-value=1.9e-06  Score=83.28  Aligned_cols=73  Identities=23%  Similarity=0.345  Sum_probs=56.2

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMIL  448 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~div  448 (534)
                      ++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++...    .++.+   +.++      ..+..|+|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            3689999999 899999999999999999999999999999888774321    12221   1110      23578999


Q ss_pred             EEcCCCC
Q 009464          449 ANTTSIG  455 (534)
Q Consensus       449 Vn~t~~g  455 (534)
                      ||+++++
T Consensus        82 vnnAg~~   88 (235)
T 3l6e_A           82 LHCAGTG   88 (235)
T ss_dssp             EEECCCC
T ss_pred             EECCCCC
Confidence            9999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.19  E-value=2.6e-06  Score=83.61  Aligned_cols=77  Identities=18%  Similarity=0.237  Sum_probs=59.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----cc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~----~~~~~---~~~~------~  441 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..    ..    .++.+   +.++      .
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999 8999999999999999999999999999988887742    11    12222   1110      2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||++++..
T Consensus        86 ~g~id~lvnnAg~~~  100 (262)
T 3pk0_A           86 FGGIDVVCANAGVFP  100 (262)
T ss_dssp             HSCCSEEEECCCCCC
T ss_pred             hCCCCEEEECCCCCC
Confidence            347899999998753

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.19  E-value=1.5e-06  Score=85.80  Aligned_cols=75  Identities=27%  Similarity=0.333  Sum_probs=59.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+..|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999 899999999999999999999999999999888875432    12222   1110      234789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus        88 ~lv~nAg~~   96 (271)
T 3tzq_B           88 IVDNNAAHS   96 (271)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.18  E-value=1.7e-06  Score=85.29  Aligned_cols=73  Identities=26%  Similarity=0.443  Sum_probs=56.5

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----cccccc---ccc------CCCCc
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPEDG  445 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~~~~  445 (534)
                      .+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    +++.+.   .++      ..+..
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999 899999999999999999999999999999888773   111    222221   110      23578


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+|||++++.
T Consensus        83 D~lVnnAG~~   92 (264)
T 3tfo_A           83 DVLVNNAGVM   92 (264)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999875

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=98.18  E-value=7.6e-06  Score=80.70  Aligned_cols=176  Identities=16%  Similarity=0.233  Sum_probs=113.9

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchH-----HHHhhcc--
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHK-----EAAVKCC--  325 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~l--  325 (534)
                      .-++| +|-+++-- ..-.+..++.|++.....++-    +++.+.++.+ .++++.|+-|-.|+-     ..++..+  
T Consensus        37 vilvg~dpas~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p  115 (281)
T 2c2x_A           37 TILVGDDPGSQAYV-RGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDP  115 (281)
T ss_dssp             EEEESCCHHHHHHH-HHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCG
T ss_pred             EEEeCCChhhHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCc
Confidence            34556 44444332 233556789999987776664    3566666666 578999999999963     2333222  


Q ss_pred             ----cccCHH--HHHh-cCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchh-HH
Q 009464          326 ----DEVDTV--AKSI-GAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA-GK  397 (534)
Q Consensus       326 ----d~~~~~--A~~i-GAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~-gr  397 (534)
                          |-+++.  .+.. | -...+           -.--.|++..|++.           +.+++||+++|+|+|.+ |+
T Consensus       116 ~KDVDG~~p~n~g~l~~g-~~~~~-----------PcTp~gi~~ll~~~-----------~i~l~gk~vvVvG~s~iVG~  172 (281)
T 2c2x_A          116 AKDADGLHPTNLGRLVLG-TPAPL-----------PCTPRGIVHLLRRY-----------DISIAGAHVVVIGRGVTVGR  172 (281)
T ss_dssp             GGBTTSCCHHHHHHHHHT-CCCCC-----------CHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHH
T ss_pred             cCCccCCChhhHHHHhCC-CCCCC-----------CChHHHHHHHHHHc-----------CCCCCCCEEEEECCCcHHHH
Confidence                222221  0110 1 00010           01245667766542           35789999999999975 99


Q ss_pred             HHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCE
Q 009464          398 ALAYGAKAK--GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL  475 (534)
Q Consensus       398 aia~~L~~~--G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~  475 (534)
                      .++..|...  |++|++++|+.+.                 +.+ ....+|+||++++..   .    .+..++++++.+
T Consensus       173 p~A~lL~~~g~~atVtv~h~~t~~-----------------L~~-~~~~ADIVI~Avg~p---~----~I~~~~vk~Gav  227 (281)
T 2c2x_A          173 PLGLLLTRRSENATVTLCHTGTRD-----------------LPA-LTRQADIVVAAVGVA---H----LLTADMVRPGAA  227 (281)
T ss_dssp             HHHHHHTSTTTCCEEEEECTTCSC-----------------HHH-HHTTCSEEEECSCCT---T----CBCGGGSCTTCE
T ss_pred             HHHHHHhcCCCCCEEEEEECchhH-----------------HHH-HHhhCCEEEECCCCC---c----ccCHHHcCCCcE
Confidence            999999999  7899999876532                 222 234689999999842   2    377888999999


Q ss_pred             EEEEecCC
Q 009464          476 VFDAVYTP  483 (534)
Q Consensus       476 v~Dv~y~p  483 (534)
                      ++|+..++
T Consensus       228 VIDVgi~r  235 (281)
T 2c2x_A          228 VIDVGVSR  235 (281)
T ss_dssp             EEECCEEE
T ss_pred             EEEccCCC
Confidence            99998764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.18  E-value=2.4e-06  Score=83.98  Aligned_cols=77  Identities=25%  Similarity=0.237  Sum_probs=58.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----c-c----ccccccc---cc------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H-A----LSLADLE---NF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~-~----~~~~~~~---~~------  440 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..    . .    .++.+..   ++      
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4578999999999 8999999999999999999999999998888776532    1 1    1222211   10      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|+|||++++..
T Consensus        84 ~~g~id~lvnnAg~~~   99 (265)
T 3lf2_A           84 TLGCASILVNNAGQGR   99 (265)
T ss_dssp             HHCSCSEEEECCCCCC
T ss_pred             HcCCCCEEEECCCCCC
Confidence            2357899999998753

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.18  E-value=2.9e-06  Score=82.75  Aligned_cols=76  Identities=21%  Similarity=0.306  Sum_probs=58.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----c--c--ccc--cc---cccc-----
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H--A--LSL--AD---LENF-----  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~--~--~~~--~~---~~~~-----  440 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..    .  .  .++  .+   +.++     
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            4578999999999 8999999999999999999999999998888776531    1  1  122  11   1110     


Q ss_pred             -CCCCceEEEEcCCCC
Q 009464          441 -NPEDGMILANTTSIG  455 (534)
Q Consensus       441 -~~~~~divVn~t~~g  455 (534)
                       ..+..|+|||++++.
T Consensus        88 ~~~g~id~lv~nAg~~  103 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLL  103 (252)
T ss_dssp             HHCSCCSEEEECCCCC
T ss_pred             HhCCCCCEEEECCccC
Confidence             245789999999874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.18  E-value=1.7e-06  Score=84.56  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=57.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~  443 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+   +.++      . +
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g   82 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-A   82 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-C
Confidence            467899999999 899999999999999999999999999988888763   111    12222   1110      2 5


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||++++..
T Consensus        83 ~id~lv~nAg~~~   95 (252)
T 3h7a_A           83 PLEVTIFNVGANV   95 (252)
T ss_dssp             CEEEEEECCCCCC
T ss_pred             CceEEEECCCcCC
Confidence            7899999998764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.17  E-value=2e-06  Score=83.66  Aligned_cols=76  Identities=26%  Similarity=0.333  Sum_probs=58.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .++.+   +.++      ..
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5678999999999 8999999999999999999999999999988877631   11    12222   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus        85 g~id~li~~Ag~~   97 (253)
T 3qiv_A           85 GGIDYLVNNAAIF   97 (253)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence            4789999999873

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.17  E-value=2.7e-06  Score=83.00  Aligned_cols=76  Identities=24%  Similarity=0.329  Sum_probs=57.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc------Ccc----cccccc---ccc------
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG------GHA----LSLADL---ENF------  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~------~~~----~~~~~~---~~~------  440 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.      ...    .++.+.   .++      
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            457899999999 899999999999999999999999999988887662      111    122221   110      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|+|||++++..
T Consensus        84 ~~g~iD~lvnnAg~~~   99 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFM   99 (250)
T ss_dssp             HHCCEEEEEECCCCCC
T ss_pred             hcCCCCEEEECCCcCC
Confidence            2357899999998754

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.17  E-value=1.6e-06  Score=85.68  Aligned_cols=77  Identities=26%  Similarity=0.375  Sum_probs=59.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+   +.++      ..
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4688999999999 899999999999999999999999999988887763   111    12222   1110      24


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|+|||++++..
T Consensus       102 g~iD~lv~nAg~~~  115 (271)
T 4ibo_A          102 IDVDILVNNAGIQF  115 (271)
T ss_dssp             CCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            57899999998753

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.17  E-value=1.6e-06  Score=86.30  Aligned_cols=76  Identities=26%  Similarity=0.374  Sum_probs=54.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---c---c--cccccc---ccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H---A--LSLADL---ENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~---~--~~~~~~---~~~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   .   .  .++.+.   .++      .
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999 8999999999999999999999999998888776631   1   1  122221   110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||++++.
T Consensus       109 ~g~iD~lvnnAG~~  122 (281)
T 4dry_A          109 FARLDLLVNNAGSN  122 (281)
T ss_dssp             HSCCSEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            35789999999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.16  E-value=3.2e-06  Score=82.69  Aligned_cols=76  Identities=20%  Similarity=0.167  Sum_probs=57.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+   +.++      ..
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578899999999 899999999999999999999999998888777652   111    12222   1110      12


Q ss_pred             -CCceEEEEcCCCC
Q 009464          443 -EDGMILANTTSIG  455 (534)
Q Consensus       443 -~~~divVn~t~~g  455 (534)
                       +..|+|||++++.
T Consensus        85 ~g~id~lv~~Ag~~   98 (260)
T 2ae2_A           85 HGKLNILVNNAGIV   98 (260)
T ss_dssp             TTCCCEEEECCCCC
T ss_pred             CCCCCEEEECCCCC
Confidence             5789999999875

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=98.16  E-value=9.3e-06  Score=80.86  Aligned_cols=212  Identities=19%  Similarity=0.291  Sum_probs=131.9

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEecccc----cHHHHHHHh-cCCCCCEEEeccchH-------HHHhhcc
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHK-------EAAVKCC  325 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~----~~~~~~~~~-~~~~~~G~~VT~P~K-------~~v~~~l  325 (534)
                      .-++| +|-+++-- ..-.+..++.|++.....++-+    ++.+.++.+ .++++.|+-|-.|+-       ..++..+
T Consensus        40 vilvG~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I  118 (301)
T 1a4i_A           40 ILQVGNRDDSNLYI-NVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAI  118 (301)
T ss_dssp             EEEESCCHHHHHHH-HHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTS
T ss_pred             EEEeCCChhHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhcc
Confidence            34566 44444332 2334567899999877766542    566666666 578999999999862       3333222


Q ss_pred             ------cccCHH--HHHh-cCe-eEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCch-
Q 009464          326 ------DEVDTV--AKSI-GAV-NCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-  394 (534)
Q Consensus       326 ------d~~~~~--A~~i-GAv-NTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG-  394 (534)
                            |-+++.  .+.. |-- ..++           -.--.|++..|++.           +.++.||+++|+|+|. 
T Consensus       119 ~p~KDVDG~hp~N~G~l~~g~~~~~~~-----------PcTp~gi~~ll~~~-----------~i~l~gk~vvVIG~s~i  176 (301)
T 1a4i_A          119 APEKDVDGLTSINAGRLARGDLNDCFI-----------PCTPKGCLELIKET-----------GVPIAGRHAVVVGRSKI  176 (301)
T ss_dssp             CGGGBTTCCSHHHHHHHHTTCCSSCCC-----------CHHHHHHHHHHHTT-----------TCCCTTCEEEEECCCTT
T ss_pred             CCCCCccCCChhhHHHHhcCCCCCCcc-----------CchHHHHHHHHHHc-----------CCCCCCCEEEEECCCch
Confidence                  222221  0110 000 0000           01256777776542           3578999999999996 


Q ss_pred             hHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCC
Q 009464          395 AGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYA  474 (534)
Q Consensus       395 ~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~  474 (534)
                      +|+.++..|...|++|++++++.+.                 +.+ ....+|+||++++..   .    .+..++++++.
T Consensus       177 VG~p~A~lL~~~gAtVtv~hs~t~~-----------------L~~-~~~~ADIVI~Avg~p---~----~I~~~~vk~Ga  231 (301)
T 1a4i_A          177 VGAPMHDLLLWNNATVTTCHSKTAH-----------------LDE-EVNKGDILVVATGQP---E----MVKGEWIKPGA  231 (301)
T ss_dssp             THHHHHHHHHHTTCEEEEECTTCSS-----------------HHH-HHTTCSEEEECCCCT---T----CBCGGGSCTTC
T ss_pred             HHHHHHHHHHhCCCeEEEEECCccc-----------------HHH-HhccCCEEEECCCCc---c----cCCHHHcCCCc
Confidence            6999999999999999999865322                 222 234689999999852   1    37788899999


Q ss_pred             EEEEEecCCChh-------------HHHHHHHH-CCC-eEec-c-----HHHHHHHHHHHHHHhcC
Q 009464          475 LVFDAVYTPKIT-------------RLLREAEE-SGA-TIVS-G-----LEMFIGQAYEQYERFTG  519 (534)
Q Consensus       475 ~v~Dv~y~p~~T-------------~ll~~A~~-~G~-~ii~-G-----l~ml~~Qa~~qf~lwtg  519 (534)
                      +|+|+..++...             .| ..+++ .++ .-++ |     ..||+..-+.+.+.|..
T Consensus       232 vVIDVgi~~~~d~~~~~g~klvGDVdf-~~v~~~a~~iTPVPGGVGpmTiamLl~Ntv~aa~~~~~  296 (301)
T 1a4i_A          232 IVIDCGINYVPDDKKPNGRKVVGDVAY-DEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE  296 (301)
T ss_dssp             EEEECCCBC----------CCBCSBCH-HHHTTTCSEECCSSSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEccCCCcccccccCCCeeeccccH-HHhhhhceEeCCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence            999999865321             22 22333 332 1122 3     37888888888776654

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.16  E-value=3.9e-06  Score=81.55  Aligned_cols=75  Identities=35%  Similarity=0.467  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+   +.++      ..+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            367899999999 899999999999999999999999999888877763   111    12222   1110      134


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus        84 ~id~lv~nAg~~   95 (247)
T 2jah_A           84 GLDILVNNAGIM   95 (247)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=98.16  E-value=1.7e-06  Score=85.77  Aligned_cols=77  Identities=26%  Similarity=0.345  Sum_probs=59.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .++.+   +.++      ..
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999 8999999999999999999999999998888877631   11    12222   1110      23


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|+|||++++..
T Consensus       108 g~iD~lvnnAg~~~  121 (276)
T 3r1i_A          108 GGIDIAVCNAGIVS  121 (276)
T ss_dssp             SCCSEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            47899999998753

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.16  E-value=2e-06  Score=85.46  Aligned_cols=75  Identities=29%  Similarity=0.348  Sum_probs=58.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----cccccc---ccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~---~~~------~~~  443 (534)
                      .+++|++||+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .++.+.   .++      ..+
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999 8999999999999999999999999999999888742   11    122221   110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus        85 ~iD~lvnnAg~~   96 (280)
T 3tox_A           85 GLDTAFNNAGAL   96 (280)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999864

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.16  E-value=2.5e-06  Score=84.10  Aligned_cols=78  Identities=24%  Similarity=0.377  Sum_probs=58.6

Q ss_pred             ccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH----cCcc----ccccc---cccc------
Q 009464          379 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------  440 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~----~~~~----~~~~~---~~~~------  440 (534)
                      ...+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++    +...    .++.+   +.++      
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45688999999999 89999999999999999999999999888877665    3221    12222   1110      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|+|||++++..
T Consensus        96 ~~g~iD~lvnnAg~~~  111 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINR  111 (267)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HcCCCCEEEECCCcCC
Confidence            2346899999998753

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.15  E-value=3.1e-06  Score=84.21  Aligned_cols=76  Identities=25%  Similarity=0.295  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---c----cccccc---ccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---A----LSLADL---ENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~----~~~~~~---~~~------~~  442 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++...   .    .++.+.   .++      ..
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4567899999999 89999999999999999999999999999998887421   1    122221   110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus       104 g~iD~lVnnAg~~  116 (283)
T 3v8b_A          104 GHLDIVVANAGIN  116 (283)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            5789999999874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.15  E-value=2.6e-06  Score=82.74  Aligned_cols=74  Identities=30%  Similarity=0.324  Sum_probs=56.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc------CCCCceEEE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILA  449 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~------~~~~~divV  449 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...  .++.+   +.++      ..+..|+||
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            56899999999 899999999999999999999999999888877654221  12221   1110      234689999


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      |++++.
T Consensus        83 n~Ag~~   88 (245)
T 1uls_A           83 HYAGIT   88 (245)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.14  E-value=1.9e-06  Score=84.42  Aligned_cols=77  Identities=27%  Similarity=0.335  Sum_probs=59.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----cccccc---ccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~  442 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+.   .++      ..
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999 899999999999999999999999999988887763   111    122221   110      23


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|+|||+++...
T Consensus        88 g~id~lv~nAg~~~  101 (256)
T 3gaf_A           88 GKITVLVNNAGGGG  101 (256)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            47899999998754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.14  E-value=2.9e-06  Score=82.80  Aligned_cols=75  Identities=21%  Similarity=0.286  Sum_probs=57.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++++++++...    .++.+   +.++      ..+..|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999999 899999999999999999999999999988888774321    12222   1110      234689


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus        83 ~lv~~Ag~~   91 (253)
T 1hxh_A           83 VLVNNAGIL   91 (253)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.14  E-value=3.1e-06  Score=83.64  Aligned_cols=76  Identities=24%  Similarity=0.299  Sum_probs=58.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----cccccc---ccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++.+.   ...    .++.+.   .++      ..+
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            578999999999 899999999999999999999999999988877663   111    122221   110      235


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||++++..
T Consensus       105 ~iD~lvnnAg~~~  117 (270)
T 3ftp_A          105 ALNVLVNNAGITQ  117 (270)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CCCEEEECCCCCC
Confidence            7899999998753

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.14  E-value=3.2e-06  Score=84.63  Aligned_cols=76  Identities=20%  Similarity=0.249  Sum_probs=59.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc----c----cccccc---ccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH----A----LSLADL---ENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~----~----~~~~~~---~~~------~  441 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++...    .    .++.+.   .++      .
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            4678999999999 89999999999999999999999999999988887421    1    122221   110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||++++.
T Consensus       117 ~g~iD~lvnnAg~~  130 (293)
T 3rih_A          117 FGALDVVCANAGIF  130 (293)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            35789999999875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.14  E-value=2.4e-06  Score=83.49  Aligned_cols=74  Identities=30%  Similarity=0.356  Sum_probs=56.7

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~di  447 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+..|+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56899999999 899999999999999999999999999888877664221    12221   1110      1246899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      |||++++.
T Consensus        83 lv~nAg~~   90 (254)
T 1hdc_A           83 LVNNAGIS   90 (254)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999865

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.14  E-value=2.4e-06  Score=84.15  Aligned_cols=77  Identities=26%  Similarity=0.367  Sum_probs=58.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----Ccc----cccccccc---c------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLADLEN---F------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~~----~~~~~~~~---~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.    ...    .++.+.++   +      .
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4678999999999 899999999999999999999999999888876652    221    12222111   0      2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||++++..
T Consensus        96 ~g~id~lv~nAg~~~  110 (266)
T 4egf_A           96 FGGLDVLVNNAGISH  110 (266)
T ss_dssp             HTSCSEEEEECCCCC
T ss_pred             cCCCCEEEECCCcCC
Confidence            357899999998753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.13  E-value=3.6e-06  Score=81.48  Aligned_cols=74  Identities=31%  Similarity=0.381  Sum_probs=57.0

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~  444 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.   ...    .++.+   +.++      ..+.
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999 899999999999999999999999999888877663   111    12221   1110      3457


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+|||++++.
T Consensus        83 id~li~~Ag~~   93 (247)
T 3lyl_A           83 IDILVNNAGIT   93 (247)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.13  E-value=1.5e-06  Score=85.01  Aligned_cols=75  Identities=21%  Similarity=0.240  Sum_probs=49.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      ..+..|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999999 899999999999999999999999998888877764321    12222   1110      234789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus        84 ~lv~nAg~~   92 (257)
T 3tpc_A           84 GLVNCAGTA   92 (257)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.13  E-value=6e-06  Score=81.80  Aligned_cols=77  Identities=26%  Similarity=0.374  Sum_probs=58.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--cc----ccccc---cccc------CCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~~~---~~~~------~~~  443 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..  ..    .++.+   +.++      ..+
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999 8999999999999999999999999998888877642  11    12221   1110      235


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||++++..
T Consensus       105 ~iD~lvnnAg~~~  117 (276)
T 2b4q_A          105 RLDILVNNAGTSW  117 (276)
T ss_dssp             CCSEEEECCCCCC
T ss_pred             CCCEEEECCCCCC
Confidence            7899999998753

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.13  E-value=5.4e-06  Score=81.84  Aligned_cols=77  Identities=23%  Similarity=0.211  Sum_probs=58.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+   +.++      ..
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578899999999 899999999999999999999999998888776652   111    12221   1110      23


Q ss_pred             -CCceEEEEcCCCCC
Q 009464          443 -EDGMILANTTSIGM  456 (534)
Q Consensus       443 -~~~divVn~t~~g~  456 (534)
                       +..|+|||++++..
T Consensus        97 ~g~id~lv~nAg~~~  111 (273)
T 1ae1_A           97 DGKLNILVNNAGVVI  111 (273)
T ss_dssp             TSCCCEEEECCCCCC
T ss_pred             CCCCcEEEECCCCCC
Confidence             67899999998753

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.13  E-value=3e-06  Score=83.45  Aligned_cols=77  Identities=29%  Similarity=0.317  Sum_probs=58.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----cccccc---ccc--CCCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLADL---ENF--NPED  444 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~~---~~~--~~~~  444 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..     ..    .++.+.   .++  ..+.
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            3578999999999 8999999999999999999999999998888776631     11    122111   110  3457


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|++||++++..
T Consensus        86 id~lv~nAg~~~   97 (267)
T 3t4x_A           86 VDILINNLGIFE   97 (267)
T ss_dssp             CSEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            899999998753

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.13  E-value=4.2e-06  Score=82.26  Aligned_cols=76  Identities=17%  Similarity=0.289  Sum_probs=56.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH-----cCcc----ccccc---cccc------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV-----GGHA----LSLAD---LENF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~-----~~~~----~~~~~---~~~~------  440 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++     +...    .++.+   +.++      
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999 89999999999999999999999999888877665     2211    12222   1110      


Q ss_pred             CCCCceEEEEcCCCC
Q 009464          441 NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ~~~~~divVn~t~~g  455 (534)
                      ..+..|+|||++++.
T Consensus        89 ~~g~id~lv~nAg~~  103 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIE  103 (267)
T ss_dssp             HHSCCSEEEECCCCC
T ss_pred             HcCCCCEEEECCCcC
Confidence            134689999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.12  E-value=3.3e-06  Score=83.76  Aligned_cols=76  Identities=17%  Similarity=0.115  Sum_probs=55.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~  443 (534)
                      .+++|++||+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .++.+.+   ++      ..+
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            356899999999 8999999999999999999999999999998887742   11    1222211   10      235


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||++++..
T Consensus       101 ~id~lv~nAg~~~  113 (279)
T 3sju_A          101 PIGILVNSAGRNG  113 (279)
T ss_dssp             SCCEEEECCCCCC
T ss_pred             CCcEEEECCCCCC
Confidence            7899999998753

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.11  E-value=5.7e-06  Score=81.04  Aligned_cols=76  Identities=30%  Similarity=0.483  Sum_probs=57.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH----cCcc----cccccc---ccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLADL---ENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~----~~~~----~~~~~~---~~~------~~  442 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++    +...    .++.+.   .++      ..
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999 89999999999999999999999999888877665    2221    122221   110      12


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|+|||+++...
T Consensus        84 g~id~lv~~Ag~~~   97 (263)
T 3ai3_A           84 GGADILVNNAGTGS   97 (263)
T ss_dssp             SSCSEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            47899999998753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.11  E-value=3.5e-06  Score=82.66  Aligned_cols=75  Identities=24%  Similarity=0.324  Sum_probs=57.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++....    .++.+   +.++      ..+..|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            367899999999 899999999999999999999999999888877764221    12221   1110      124789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus        84 ~lv~~Ag~~   92 (260)
T 1nff_A           84 VLVNNAGIL   92 (260)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999875

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.10  E-value=3.3e-06  Score=84.78  Aligned_cols=76  Identities=20%  Similarity=0.268  Sum_probs=58.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    +++.+   +.++      ..+
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            478999999999 8999999999999999999999999999988877631   11    22222   1110      124


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||++++..
T Consensus       108 ~id~lvnnAg~~~  120 (301)
T 3tjr_A          108 GVDVVFSNAGIVV  120 (301)
T ss_dssp             SCSEEEECCCCCC
T ss_pred             CCCEEEECCCcCC
Confidence            7899999998763

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.10  E-value=3.7e-06  Score=83.29  Aligned_cols=76  Identities=18%  Similarity=0.232  Sum_probs=57.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC------cc----cccccc---ccc-----
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG------HA----LSLADL---ENF-----  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~------~~----~~~~~~---~~~-----  440 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..      ..    .++.+.   .++     
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            3578999999999 8999999999999999999999999999888887742      11    122221   110     


Q ss_pred             -CCCCceEEEEcCCCC
Q 009464          441 -NPEDGMILANTTSIG  455 (534)
Q Consensus       441 -~~~~~divVn~t~~g  455 (534)
                       ..+..|+|||+++..
T Consensus        87 ~~~g~id~lv~nAg~~  102 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGS  102 (281)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCCcC
Confidence             234689999999863

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.10  E-value=7.2e-06  Score=81.08  Aligned_cols=76  Identities=24%  Similarity=0.330  Sum_probs=59.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc-----CCCCce
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF-----NPEDGM  446 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~-----~~~~~d  446 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++     ..+..|
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4678999999999 899999999999999999999999999999998886432    12221   1110     345789


Q ss_pred             EEEEc-CCCC
Q 009464          447 ILANT-TSIG  455 (534)
Q Consensus       447 ivVn~-t~~g  455 (534)
                      ++||+ ++.+
T Consensus       106 ~lv~~aag~~  115 (281)
T 3ppi_A          106 YAVVAHGGFG  115 (281)
T ss_dssp             EEEECCCCCC
T ss_pred             eEEEccCccc
Confidence            99998 5554

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.09  E-value=5.5e-06  Score=81.99  Aligned_cols=76  Identities=20%  Similarity=0.221  Sum_probs=57.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+   +.++      ..+
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            578899999999 899999999999999999999999998888777662   211    12221   1110      235


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||++++..
T Consensus        99 ~iD~lv~~Ag~~~  111 (277)
T 2rhc_B           99 PVDVLVNNAGRPG  111 (277)
T ss_dssp             SCSEEEECCCCCC
T ss_pred             CCCEEEECCCCCC
Confidence            7899999998753

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.09  E-value=9.3e-07  Score=86.43  Aligned_cols=72  Identities=19%  Similarity=0.220  Sum_probs=54.9

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G--~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~di  447 (534)
                      +|+++|+|+ ||+|++++..|++.|  +.|++++|+.++++++.++++...    .++.+   +.++      ..+..|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            589999999 899999999999986  589999999999999988875322    12222   1110      2357899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      |||++++.
T Consensus        82 lvnnAg~~   89 (254)
T 3kzv_A           82 LVANAGVL   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEECCccc
Confidence            99999874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.09  E-value=7.7e-06  Score=79.62  Aligned_cols=71  Identities=24%  Similarity=0.429  Sum_probs=55.1

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---ccc----c--CCCCceEEEE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LEN----F--NPEDGMILAN  450 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~----~--~~~~~divVn  450 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++...    .++.+   +.+    .  ..+..|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            57999999 899999999999999999999999999998888775321    12221   111    0  2457899999


Q ss_pred             cCCCC
Q 009464          451 TTSIG  455 (534)
Q Consensus       451 ~t~~g  455 (534)
                      ++++.
T Consensus        81 nAg~~   85 (248)
T 3asu_A           81 NAGLA   85 (248)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            99875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.09  E-value=3e-06  Score=83.41  Aligned_cols=76  Identities=24%  Similarity=0.259  Sum_probs=57.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++....    .++.+   +.++      ..+..|
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence            357899999999 899999999999999999999999999988887764221    12221   1110      234689


Q ss_pred             EEEEcCCCCC
Q 009464          447 ILANTTSIGM  456 (534)
Q Consensus       447 ivVn~t~~g~  456 (534)
                      +|||++++..
T Consensus        83 ~lvnnAg~~~   92 (263)
T 2a4k_A           83 GVAHFAGVAH   92 (263)
T ss_dssp             EEEEGGGGTT
T ss_pred             EEEECCCCCC
Confidence            9999998753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.09  E-value=2.7e-06  Score=72.06  Aligned_cols=69  Identities=19%  Similarity=0.169  Sum_probs=51.4

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHcCcc--ccc---ccccccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA--LSL---ADLENFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~~~~~--~~~---~~~~~~~~~~~divVn~t~  453 (534)
                      .+++++|+|+|++|++++..|.+.| ++|++++|+.++++.+. ..+...  .++   +++.+ ....+|+||+++|
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~~~   78 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAK-ALGGFDAVISAAP   78 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHH-HTTTCSEEEECSC
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHH-HHcCCCEEEECCC
Confidence            3578999999999999999999999 69999999999988776 222211  112   22223 3457899999985

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.09  E-value=3.7e-06  Score=81.50  Aligned_cols=73  Identities=19%  Similarity=0.085  Sum_probs=55.1

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-e--CCHHHHHHHHHHH-cCccccccccccc------CCCCceEEEEcC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIA-N--RTYDRARELAETV-GGHALSLADLENF------NPEDGMILANTT  452 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~--R~~~~a~~la~~~-~~~~~~~~~~~~~------~~~~~divVn~t  452 (534)
                      +|+++|+|+ ||+|++++..|++.|++|+++ +  |+.++++++++++ +.+..+.+++.++      ..+..|+|||++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~A   80 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTIVSND   80 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGSSCEEEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            478999999 899999999999999999999 7  9999998888776 2122122222110      345789999999


Q ss_pred             CCCC
Q 009464          453 SIGM  456 (534)
Q Consensus       453 ~~g~  456 (534)
                      ++..
T Consensus        81 g~~~   84 (244)
T 1zmo_A           81 YIPR   84 (244)
T ss_dssp             CCCT
T ss_pred             CcCC
Confidence            8753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.08  E-value=3e-06  Score=83.30  Aligned_cols=78  Identities=19%  Similarity=0.189  Sum_probs=54.2

Q ss_pred             ccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc------CCCCce
Q 009464          379 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~------~~~~~d  446 (534)
                      ..++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++.+.....+...  .++.+   +.++      ..+..|
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD  101 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLR  101 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            35678999999999 899999999999999999999999887655555544322  12221   1110      245789


Q ss_pred             EEEEcCCCCC
Q 009464          447 ILANTTSIGM  456 (534)
Q Consensus       447 ivVn~t~~g~  456 (534)
                      +|||++++..
T Consensus       102 ~lv~nAg~~~  111 (260)
T 3gem_A          102 AVVHNASEWL  111 (260)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCCccC
Confidence            9999998753

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=98.08  E-value=4.8e-06  Score=82.44  Aligned_cols=75  Identities=21%  Similarity=0.190  Sum_probs=57.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----Ccc----cccccc---ccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLADL---ENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~~----~~~~~~---~~~------~~  442 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.    ...    .++.+.   .++      ..
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            478999999999 899999999999999999999999998888776652    221    122221   110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus       104 g~id~lv~nAg~~  116 (277)
T 4fc7_A          104 GRIDILINCAAGN  116 (277)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCcCC
Confidence            5789999999865

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.08  E-value=3.2e-06  Score=82.84  Aligned_cols=76  Identities=20%  Similarity=0.275  Sum_probs=57.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~  445 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++....    .++.+   +.++      ..+..
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            3467899999999 899999999999999999999999999888877653211    12221   1110      12468


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+|||++++.
T Consensus        88 D~lv~~Ag~~   97 (263)
T 3ak4_A           88 DLLCANAGVS   97 (263)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCcC
Confidence            9999999865

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=98.08  E-value=5.2e-06  Score=81.38  Aligned_cols=75  Identities=20%  Similarity=0.242  Sum_probs=57.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccccc---cc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~~  443 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .++.+.+   ++      ..+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            467899999999 8999999999999999999999999998888777632   11    1222211   10      234


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus        84 ~id~lv~nAg~~   95 (262)
T 1zem_A           84 KIDFLFNNAGYQ   95 (262)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.07  E-value=1.2e-05  Score=77.54  Aligned_cols=76  Identities=30%  Similarity=0.421  Sum_probs=57.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cc--ccccc---cccc--CCCCceEEEEc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF--NPEDGMILANT  451 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~--~~~~~---~~~~--~~~~~divVn~  451 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.. +.  .++.+   +.++  ..+..|+|||+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            467899999999 8999999999999999999999999988888776532 11  12222   1111  23568999999


Q ss_pred             CCCCC
Q 009464          452 TSIGM  456 (534)
Q Consensus       452 t~~g~  456 (534)
                      ++...
T Consensus        84 Ag~~~   88 (244)
T 3d3w_A           84 AAVAL   88 (244)
T ss_dssp             CCCCC
T ss_pred             CccCC
Confidence            98653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.07  E-value=5.4e-06  Score=82.08  Aligned_cols=77  Identities=22%  Similarity=0.325  Sum_probs=57.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-------------CHHHHHHHHHHHcC---cc----ccccc--
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-------------TYDRARELAETVGG---HA----LSLAD--  436 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-------------~~~~a~~la~~~~~---~~----~~~~~--  436 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|             +.++++++++.+..   ..    .++.+  
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            3578999999999 89999999999999999999998             78888888776642   11    12221  


Q ss_pred             -cccc------CCCCceEEEEcCCCCC
Q 009464          437 -LENF------NPEDGMILANTTSIGM  456 (534)
Q Consensus       437 -~~~~------~~~~~divVn~t~~g~  456 (534)
                       +.++      ..+..|+|||++++..
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~~  117 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVLS  117 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence             1110      2357899999998753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.07  E-value=3.6e-06  Score=83.10  Aligned_cols=75  Identities=24%  Similarity=0.360  Sum_probs=55.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH---cC---cc----ccccc---cccc------C
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GG---HA----LSLAD---LENF------N  441 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~---~~---~~----~~~~~---~~~~------~  441 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++   ..   ..    .++.+   +.++      .
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            56899999999 89999999999999999999999999998888776   21   11    12221   1110      1


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||+++...
T Consensus        84 ~g~id~lv~~Ag~~~   98 (278)
T 1spx_A           84 FGKLDILVNNAGAAI   98 (278)
T ss_dssp             HSCCCEEEECCC---
T ss_pred             cCCCCEEEECCCCCC
Confidence            247899999998753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.06  E-value=6.8e-06  Score=81.60  Aligned_cols=77  Identities=22%  Similarity=0.373  Sum_probs=57.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHcC----cc----ccccc---cccc------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGG----HA----LSLAD---LENF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~~----~~----~~~~~---~~~~------  440 (534)
                      .++.+|+++|+|+ ||+|++++..|++.|++|++++| +.++++++++++..    ..    .++.+   +.++      
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4578899999999 89999999999999999999999 77778887776632    11    12221   1110      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|+|||++++..
T Consensus       101 ~~g~iD~lv~nAg~~~  116 (281)
T 3v2h_A          101 RFGGADILVNNAGVQF  116 (281)
T ss_dssp             HTSSCSEEEECCCCCC
T ss_pred             HCCCCCEEEECCCCCC
Confidence            2457899999998753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=98.05  E-value=6.7e-06  Score=81.62  Aligned_cols=76  Identities=25%  Similarity=0.348  Sum_probs=56.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC----------------HHHHHHHHHHHcC---cc----ccccc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT----------------YDRARELAETVGG---HA----LSLAD  436 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~----------------~~~a~~la~~~~~---~~----~~~~~  436 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+                .++++++++.+..   ..    .++.+
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            578999999999 899999999999999999999887                7788887776632   11    12221


Q ss_pred             ---cccc------CCCCceEEEEcCCCCC
Q 009464          437 ---LENF------NPEDGMILANTTSIGM  456 (534)
Q Consensus       437 ---~~~~------~~~~~divVn~t~~g~  456 (534)
                         +.++      ..+..|+|||++++..
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~  116 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGN  116 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccC
Confidence               1110      2357899999998764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.05  E-value=8.7e-06  Score=79.62  Aligned_cols=74  Identities=24%  Similarity=0.324  Sum_probs=56.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----C-cc----cccccc---ccc------C
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----G-HA----LSLADL---ENF------N  441 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~-~~----~~~~~~---~~~------~  441 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.    . ..    .++.+.   .++      .
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            467899999999 899999999999999999999999998888877653    1 11    122221   110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+ .|+|||++++.
T Consensus        84 ~g-id~lv~~Ag~~   96 (260)
T 2z1n_A           84 GG-ADILVYSTGGP   96 (260)
T ss_dssp             TC-CSEEEECCCCC
T ss_pred             cC-CCEEEECCCCC
Confidence            34 89999999865

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=98.05  E-value=4.1e-06  Score=81.03  Aligned_cols=76  Identities=30%  Similarity=0.349  Sum_probs=57.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----c--c--ccc--cc---cccc-----
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H--A--LSL--AD---LENF-----  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~--~--~~~--~~---~~~~-----  440 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..    .  .  .++  .+   +.++     
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            4578999999999 8999999999999999999999999999888877631    1  1  112  11   1110     


Q ss_pred             -CCCCceEEEEcCCCC
Q 009464          441 -NPEDGMILANTTSIG  455 (534)
Q Consensus       441 -~~~~~divVn~t~~g  455 (534)
                       ..+..|+|||+++..
T Consensus        90 ~~~g~id~lv~nAg~~  105 (247)
T 3i1j_A           90 HEFGRLDGLLHNASII  105 (247)
T ss_dssp             HHHSCCSEEEECCCCC
T ss_pred             HhCCCCCEEEECCccC
Confidence             234789999999864

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.05  E-value=8e-06  Score=80.56  Aligned_cols=75  Identities=24%  Similarity=0.341  Sum_probs=57.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---cccccc---cccc------CCCCceE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---ALSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~~~~~~---~~~~------~~~~~di  447 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...   ..++.+   +.++      ..+..|+
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            467899999999 89999999999999999999999999988887765321   112221   1110      2346899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      |||+++..
T Consensus        86 lv~nAg~~   93 (270)
T 1yde_A           86 VVNNAGHH   93 (270)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999865

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.05  E-value=9.9e-06  Score=78.47  Aligned_cols=77  Identities=25%  Similarity=0.337  Sum_probs=58.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-----ccccc---cccc-----CCCCc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----LSLAD---LENF-----NPEDG  445 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-----~~~~~---~~~~-----~~~~~  445 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++...     .++.+   +.++     ..+..
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            4578899999999 899999999999999999999999999888877764221     12222   1110     02468


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |+|||+++...
T Consensus        87 d~li~~Ag~~~   97 (254)
T 2wsb_A           87 SILVNSAGIAR   97 (254)
T ss_dssp             CEEEECCCCCC
T ss_pred             cEEEECCccCC
Confidence            99999998753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.05  E-value=4.6e-06  Score=81.54  Aligned_cols=76  Identities=21%  Similarity=0.271  Sum_probs=57.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.   ...    .++.+   +.++      ..
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3577899999999 899999999999999999999999998888776652   111    12221   1110      12


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus        90 g~iD~lv~~Ag~~  102 (260)
T 2zat_A           90 GGVDILVSNAAVN  102 (260)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4789999999864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.04  E-value=5.1e-06  Score=79.79  Aligned_cols=74  Identities=24%  Similarity=0.281  Sum_probs=55.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cc--ccc-ccccccCCCCceEEEEcCCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSL-ADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~--~~~-~~~~~~~~~~~divVn~t~~  454 (534)
                      ..+++++++|+|+ |++|++++..|.+.|++|+++.|+.++++++... +. ..  .++ +++.+ .+.++|+|||+++.
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~-~~~~~~~~Dl~~~~~~-~~~~~D~vi~~ag~   94 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER-GASDIVVANLEEDFSH-AFASIDAVVFAAGS   94 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT-TCSEEEECCTTSCCGG-GGTTCSEEEECCCC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC-CCceEEEcccHHHHHH-HHcCCCEEEECCCC
Confidence            5678999999999 9999999999999999999999999988877642 22 22  122 33334 45679999999986


Q ss_pred             C
Q 009464          455 G  455 (534)
Q Consensus       455 g  455 (534)
                      .
T Consensus        95 ~   95 (236)
T 3e8x_A           95 G   95 (236)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.04  E-value=4e-06  Score=82.17  Aligned_cols=76  Identities=33%  Similarity=0.504  Sum_probs=58.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----cccccc---ccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~  442 (534)
                      ..+++|++||+|+ ||+|++++..|++.|++|++++|+.++++++.+++.   ...    .++.+.   .++      ..
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            4578899999999 899999999999999999999999999988887763   111    122221   110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||+++++
T Consensus       105 g~id~lv~~Ag~~  117 (262)
T 3rkr_A          105 GRCDVLVNNAGVG  117 (262)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCcc
Confidence            4689999999874

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.04  E-value=6.6e-06  Score=83.31  Aligned_cols=76  Identities=25%  Similarity=0.317  Sum_probs=58.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----ccccccc---cc------C
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLADLE---NF------N  441 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~~~---~~------~  441 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+..     ..    .++.+..   ++      .
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            467899999999 8999999999999999999999999999888776631     11    1222211   10      2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||+++++.
T Consensus        85 ~g~id~lv~nAg~~~   99 (319)
T 3ioy_A           85 FGPVSILCNNAGVNL   99 (319)
T ss_dssp             TCCEEEEEECCCCCC
T ss_pred             CCCCCEEEECCCcCC
Confidence            357899999998753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.04  E-value=6.9e-06  Score=81.92  Aligned_cols=76  Identities=29%  Similarity=0.441  Sum_probs=58.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHc-----Ccc----cccccccc---c----
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGA---RVVIANRTYDRARELAETVG-----GHA----LSLADLEN---F----  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~---~v~i~~R~~~~a~~la~~~~-----~~~----~~~~~~~~---~----  440 (534)
                      .+++|+++|+|+ ||+|++++..|++.|+   +|++++|+.++++++++++.     ...    +++.+.++   +    
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            578999999999 8999999999999987   99999999999998887763     111    12222111   0    


Q ss_pred             --CCCCceEEEEcCCCCC
Q 009464          441 --NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 --~~~~~divVn~t~~g~  456 (534)
                        ..+..|+|||++++..
T Consensus       110 ~~~~g~iD~lVnnAG~~~  127 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKAL  127 (287)
T ss_dssp             CGGGCSCCEEEECCCCCC
T ss_pred             HHhcCCCCEEEECCCcCC
Confidence              2357899999998753

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.03  E-value=7.1e-06  Score=80.10  Aligned_cols=75  Identities=31%  Similarity=0.445  Sum_probs=55.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc------CCCCceEE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMIL  448 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~------~~~~~div  448 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++ +++++++....  .++.+   +.++      ..+..|+|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            356899999999 899999999999999999999999887 77776653111  12221   1110      23468999


Q ss_pred             EEcCCCCC
Q 009464          449 ANTTSIGM  456 (534)
Q Consensus       449 Vn~t~~g~  456 (534)
                      ||+++...
T Consensus        82 v~~Ag~~~   89 (256)
T 2d1y_A           82 VNNAAIAA   89 (256)
T ss_dssp             EECCCCCC
T ss_pred             EECCCCCC
Confidence            99998753

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=98.03  E-value=7.3e-06  Score=81.78  Aligned_cols=47  Identities=30%  Similarity=0.378  Sum_probs=41.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHH
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETV  427 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~  427 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++ |+.++++++++++
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l   54 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL   54 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence            467899999999 8999999999999999999999 9999988887766

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.03  E-value=1e-05  Score=80.06  Aligned_cols=77  Identities=25%  Similarity=0.358  Sum_probs=55.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC------------HHHHHHHHHHHc---Ccc----ccccc---
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETVG---GHA----LSLAD---  436 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~------------~~~a~~la~~~~---~~~----~~~~~---  436 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+            .++++++.+.+.   ...    .++.+   
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA   85 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            4578999999999 899999999999999999999997            666666655442   211    12222   


Q ss_pred             cccc------CCCCceEEEEcCCCCC
Q 009464          437 LENF------NPEDGMILANTTSIGM  456 (534)
Q Consensus       437 ~~~~------~~~~~divVn~t~~g~  456 (534)
                      +.++      ..+..|+|||++++..
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~  111 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGIST  111 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            1110      2357899999998763

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=98.02  E-value=5e-05  Score=78.23  Aligned_cols=114  Identities=17%  Similarity=0.163  Sum_probs=80.2

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      +++||+++|+|+|.+|+.+|..|.+.|++|+++|++.+++++++++++....+.+++-   ...+|+++.|+.-..   .
T Consensus       170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll---~~~~DIvip~a~~~~---I  243 (364)
T 1leh_A          170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIY---GVTCDIFAPCALGAV---L  243 (364)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTT---TCCCSEEEECSCSCC---B
T ss_pred             CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHh---ccCCcEeeccchHHH---h
Confidence            6899999999999999999999999999999999999999999998875544433322   136899998753221   1


Q ss_pred             CCCCCCccccCCCCEEEEEecCCChh-HHHHHHHHCCCeEeccH
Q 009464          461 DETPIPKHALGHYALVFDAVYTPKIT-RLLREAEESGATIVSGL  503 (534)
Q Consensus       461 ~~~~i~~~~l~~~~~v~Dv~y~p~~T-~ll~~A~~~G~~ii~Gl  503 (534)
                      +..  ....+ ...++.+..-.|..+ ...+..+++|+.++++.
T Consensus       244 ~~~--~~~~l-g~~iV~e~An~p~t~~ea~~~L~~~Gi~~~Pd~  284 (364)
T 1leh_A          244 NDF--TIPQL-KAKVIAGSADNQLKDPRHGKYLHELGIVYAPDY  284 (364)
T ss_dssp             STT--HHHHC-CCSEECCSCSCCBSSHHHHHHHHHHTCEECCHH
T ss_pred             CHH--HHHhC-CCcEEEeCCCCCcccHHHHHHHHhCCCEEecce
Confidence            111  11123 335666666556543 56667778887666544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=98.02  E-value=1.1e-05  Score=80.38  Aligned_cols=75  Identities=21%  Similarity=0.289  Sum_probs=56.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc----c----cccccc-c---cc------C
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH----A----LSLADL-E---NF------N  441 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~----~----~~~~~~-~---~~------~  441 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++...    .    +++.+. .   .+      .
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            457899999999 89999999999999999999999999998888776421    1    223222 1   10      1


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||++++.
T Consensus        89 ~g~iD~lv~nAg~~  102 (311)
T 3o26_A           89 FGKLDILVNNAGVA  102 (311)
T ss_dssp             HSSCCEEEECCCCC
T ss_pred             CCCCCEEEECCccc
Confidence            34789999999876

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.02  E-value=1.7e-05  Score=76.38  Aligned_cols=75  Identities=28%  Similarity=0.350  Sum_probs=56.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cc--ccccc---cccc--CCCCceEEEEc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF--NPEDGMILANT  451 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~--~~~~~---~~~~--~~~~~divVn~  451 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.. +.  .++.+   +.++  ..+..|+|||+
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            467899999999 8999999999999999999999999988887765421 11  12222   1111  23468999999


Q ss_pred             CCCC
Q 009464          452 TSIG  455 (534)
Q Consensus       452 t~~g  455 (534)
                      ++..
T Consensus        84 Ag~~   87 (244)
T 1cyd_A           84 AALV   87 (244)
T ss_dssp             CCCC
T ss_pred             Cccc
Confidence            9865

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.02  E-value=6.1e-06  Score=81.68  Aligned_cols=75  Identities=19%  Similarity=0.298  Sum_probs=56.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC------cc----cccccc---ccc------C
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG------HA----LSLADL---ENF------N  441 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~------~~----~~~~~~---~~~------~  441 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..      ..    .++.+.   .++      .
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            57899999999 8999999999999999999999999998888776631      11    122221   110      1


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||++++..
T Consensus        84 ~g~iD~lv~nAg~~~   98 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAI   98 (280)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            346899999998753

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.02  E-value=3.3e-06  Score=83.65  Aligned_cols=77  Identities=23%  Similarity=0.302  Sum_probs=58.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccccc---cc-----CCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLE---NF-----NPE  443 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~~---~~-----~~~  443 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+..   ++     ..+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            3578999999999 899999999999999999999999998888877762   111    1222211   10     114


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||++++..
T Consensus       109 ~iD~lvnnAg~~~  121 (275)
T 4imr_A          109 PVDILVINASAQI  121 (275)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CCCEEEECCCCCC
Confidence            7899999998753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.02  E-value=7.2e-06  Score=81.06  Aligned_cols=76  Identities=22%  Similarity=0.311  Sum_probs=56.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-------------CHHHHHHHHHHHc---Ccc----ccccc---
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-------------TYDRARELAETVG---GHA----LSLAD---  436 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-------------~~~~a~~la~~~~---~~~----~~~~~---  436 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|             +.++++++++.+.   ...    .++.+   
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            578999999999 89999999999999999999998             6777777766553   111    12222   


Q ss_pred             cccc------CCCCceEEEEcCCCCC
Q 009464          437 LENF------NPEDGMILANTTSIGM  456 (534)
Q Consensus       437 ~~~~------~~~~~divVn~t~~g~  456 (534)
                      +.++      ..+..|+|||++++..
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~  113 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAA  113 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            1110      2356899999998763

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=98.02  E-value=8.5e-06  Score=79.68  Aligned_cols=74  Identities=27%  Similarity=0.419  Sum_probs=55.7

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------C-CC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------N-PE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~-~~  443 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+   +.++      . .+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            56899999999 899999999999999999999999998888877652   211    12221   1110      1 46


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||+++.|
T Consensus        83 ~id~lvnnAg~g   94 (260)
T 2qq5_A           83 RLDVLVNNAYAG   94 (260)
T ss_dssp             CCCEEEECCCTT
T ss_pred             CceEEEECCccc
Confidence            789999999643

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.01  E-value=5.4e-06  Score=80.43  Aligned_cols=74  Identities=30%  Similarity=0.440  Sum_probs=55.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHc---Ccc----ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++| +.++++++++++.   ...    .++.+   +.++      ..+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999 89999999999999999999999 8888888776652   111    12222   1110      124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus        82 ~id~lv~nAg~~   93 (246)
T 2uvd_A           82 QVDILVNNAGVT   93 (246)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=98.01  E-value=3.9e-06  Score=83.48  Aligned_cols=77  Identities=29%  Similarity=0.293  Sum_probs=55.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHc----Ccc----ccccc----c---ccc--
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG----GHA----LSLAD----L---ENF--  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~----~~~----~~~~~----~---~~~--  440 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+. ++++++++++.    ...    .++.+    .   .++  
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            4578999999999 8999999999999999999999998 88887776653    111    22222    1   110  


Q ss_pred             ----CCCCceEEEEcCCCCC
Q 009464          441 ----NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ----~~~~~divVn~t~~g~  456 (534)
                          ..+..|+|||++++..
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~  118 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFY  118 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHhcCCCCEEEECCCCCC
Confidence                1246899999998753

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.01  E-value=8.4e-06  Score=78.11  Aligned_cols=72  Identities=21%  Similarity=0.310  Sum_probs=53.8

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc---CCCCceEEEEcCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF---NPEDGMILANTTS  453 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~---~~~~~divVn~t~  453 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++...    .++.+   +.++   .....|+|||+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            57999999 899999999999999999999999999999888764321    12222   1110   2233599999998


Q ss_pred             CCC
Q 009464          454 IGM  456 (534)
Q Consensus       454 ~g~  456 (534)
                      .+.
T Consensus        82 ~~~   84 (230)
T 3guy_A           82 SGY   84 (230)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            753

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.01  E-value=7.2e-06  Score=80.33  Aligned_cols=77  Identities=26%  Similarity=0.365  Sum_probs=58.8

Q ss_pred             cccCCcEEEEEcC-c-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----cc----cccccc---ccc------
Q 009464          380 SALAGKLFVVIGA-G-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLADL---ENF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-G-G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~----~~~~~~---~~~------  440 (534)
                      ..+++|+++|+|+ | |+|++++..|++.|++|++++|+.++++++.+++..    ..    .++.+.   .++      
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            4578999999999 7 899999999999999999999999999888887732    11    122221   110      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|+|||++++..
T Consensus        98 ~~g~id~li~~Ag~~~  113 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGG  113 (266)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HhCCCcEEEECCCcCC
Confidence            2346899999998753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.01  E-value=6.1e-06  Score=80.82  Aligned_cols=74  Identities=24%  Similarity=0.306  Sum_probs=55.7

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHcC---cc----cccccc---ccc------CCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLADL---ENF------NPED  444 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~~---~~----~~~~~~---~~~------~~~~  444 (534)
                      ++|+++|+|+ ||+|++++..|++.|++|++. +|+.++++++++++..   ..    .++.+.   .++      ..+.
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999 899999999999999998886 9999999988887642   11    122221   110      2356


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||+++++.
T Consensus        83 id~lv~nAg~~~   94 (258)
T 3oid_A           83 LDVFVNNAASGV   94 (258)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            899999998653

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.00  E-value=7e-06  Score=81.06  Aligned_cols=76  Identities=22%  Similarity=0.286  Sum_probs=55.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC------------HHHHHHHHHHHc---Ccc----ccccc---
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETVG---GHA----LSLAD---  436 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~------------~~~a~~la~~~~---~~~----~~~~~---  436 (534)
                      .++++|++||+|+ ||+|++++..|++.|++|++++|+            .++++++.+.+.   ...    .++.+   
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            4678999999999 899999999999999999999987            777776665542   211    12222   


Q ss_pred             cccc------CCCCceEEEEcCCCC
Q 009464          437 LENF------NPEDGMILANTTSIG  455 (534)
Q Consensus       437 ~~~~------~~~~~divVn~t~~g  455 (534)
                      +.++      ..+..|+|||++++.
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~  113 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIA  113 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCC
Confidence            1110      235789999999875

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.00  E-value=5.5e-06  Score=80.84  Aligned_cols=77  Identities=18%  Similarity=0.261  Sum_probs=58.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~  445 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++...    .++.+   +.++      ..+..
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            3577899999999 899999999999999999999999988888887775321    12221   1110      12468


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |+|||+++...
T Consensus        88 d~li~~Ag~~~   98 (265)
T 2o23_A           88 DVAVNCAGIAV   98 (265)
T ss_dssp             CEEEECCCCCC
T ss_pred             CEEEECCccCC
Confidence            99999998753

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=98.00  E-value=8.1e-06  Score=80.42  Aligned_cols=76  Identities=24%  Similarity=0.246  Sum_probs=55.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHH----cCcc----cccccc----c---cc---
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETV----GGHA----LSLADL----E---NF---  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~----~~~~----~~~~~~----~---~~---  440 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++| +.++++++++++    +...    .++.+.    +   ++   
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            357899999999 89999999999999999999999 998888887766    2211    122222    1   10   


Q ss_pred             ---CCCCceEEEEcCCCCC
Q 009464          441 ---NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ---~~~~~divVn~t~~g~  456 (534)
                         ..+..|+|||++++..
T Consensus        88 ~~~~~g~id~lv~nAg~~~  106 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYY  106 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHhcCCCCEEEECCCCCC
Confidence               1246899999998753

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=98.00  E-value=1.4e-06  Score=94.64  Aligned_cols=76  Identities=20%  Similarity=0.264  Sum_probs=59.7

Q ss_pred             CCeEEEEeccHHHHHHHHHhh-------h--------ccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eE
Q 009464          347 DGKLFGYNTDYVGAISAIEDG-------L--------RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RV  410 (534)
Q Consensus       347 ~g~l~G~NTD~~G~~~~l~~~-------l--------~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v  410 (534)
                      +|++.|+|||+.|++.+++-.       +        ++ .     ....+++++|+|+|+||+|.+++..|+..|+ +|
T Consensus       281 ~Gkl~g~~tD~~g~l~~~~la~~~~~lnL~lmrwrll~~-~-----gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~I  354 (598)
T 3vh1_A          281 QGKLAPRVVDLSSLLDPLKIADQSVDLNLKLMKWRILPD-L-----NLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKI  354 (598)
T ss_dssp             TSSSSCEEEECHHHHCHHHHHHHHHHHHHHHHHHHHCTT-C-----CHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEE
T ss_pred             CCCCcceeecchhccCHHHHHHHHHhhhhhhhhhhccch-h-----hHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEE
Confidence            799999999999999988610       0        11 0     0135778999999999999999999999999 99


Q ss_pred             EEEe----------CC---------HHHHHHHHHHHc
Q 009464          411 VIAN----------RT---------YDRARELAETVG  428 (534)
Q Consensus       411 ~i~~----------R~---------~~~a~~la~~~~  428 (534)
                      +|++          |.         ..|++.+++.+.
T Consensus       355 tLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~  391 (598)
T 3vh1_A          355 TFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLK  391 (598)
T ss_dssp             EEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHH
T ss_pred             EEECCCcccccccccccccchhhcCcHHHHHHHHHHH
Confidence            9994          43         257877777664

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=98.00  E-value=1.1e-05  Score=79.67  Aligned_cols=74  Identities=22%  Similarity=0.293  Sum_probs=55.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--cc----ccccc---cccc------CCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPED  444 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~~~---~~~~------~~~~  444 (534)
                      .++ |+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..  ..    .++.+   +.++      ..+.
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            455 89999999 8999999999999999999999999999988887742  11    12221   1110      2356


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+|||++++.
T Consensus        98 iD~lvnnAG~~  108 (272)
T 2nwq_A           98 LRGLINNAGLA  108 (272)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.99  E-value=8.3e-06  Score=81.69  Aligned_cols=77  Identities=18%  Similarity=0.267  Sum_probs=56.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC------------HHHHHHHHHHHc---Ccc----ccccc---
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETVG---GHA----LSLAD---  436 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~------------~~~a~~la~~~~---~~~----~~~~~---  436 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+            .++++++++++.   ...    .++.+   
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            3578999999999 899999999999999999999887            777777766553   111    12222   


Q ss_pred             cccc------CCCCceEEEEcCCCCC
Q 009464          437 LENF------NPEDGMILANTTSIGM  456 (534)
Q Consensus       437 ~~~~------~~~~~divVn~t~~g~  456 (534)
                      +.++      ..+..|+|||++++..
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~  129 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALAS  129 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            1110      2357899999998753

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.99  E-value=4.2e-06  Score=82.51  Aligned_cols=75  Identities=20%  Similarity=0.306  Sum_probs=53.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc--cccccc---cccc------CCCCceEE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--ALSLAD---LENF------NPEDGMIL  448 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~~~~~~---~~~~------~~~~~div  448 (534)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++... ...  ..++.+   +.++      ..+..|+|
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP-NTLCAQVDVTDKYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCT-TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcC-CceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            467899999999 8999999999999999999999998887665321 000  112221   1110      23578999


Q ss_pred             EEcCCCCC
Q 009464          449 ANTTSIGM  456 (534)
Q Consensus       449 Vn~t~~g~  456 (534)
                      ||++++..
T Consensus        92 vnnAg~~~   99 (266)
T 3p19_A           92 VNNAGMML   99 (266)
T ss_dssp             EECCCCCC
T ss_pred             EECCCcCC
Confidence            99998763

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.98  E-value=1.1e-06  Score=96.77  Aligned_cols=121  Identities=18%  Similarity=0.200  Sum_probs=76.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH---------HHHHHHHHHHc---Ccc-ccccccc---cc---
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY---------DRARELAETVG---GHA-LSLADLE---NF---  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~---------~~a~~la~~~~---~~~-~~~~~~~---~~---  440 (534)
                      .+++|+++|+|+ +|+|+++|..|++.|++|++.+|+.         ++++++++++.   ... .+..+..   ++   
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVET   84 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHH
Confidence            467899999999 6999999999999999999998765         66777766653   111 1222221   10   


Q ss_pred             ---CCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEeccHHHH
Q 009464          441 ---NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVSGLEMF  506 (534)
Q Consensus       441 ---~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~Gl~ml  506 (534)
                         ..+..|+||||+++....  ....++.+.|   ..++|+|+...   ...+++.++++ +.+||+-.++.
T Consensus        85 ~~~~~G~iDiLVnNAGi~~~~--~~~~~~~~~~---~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~a  152 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGILRDA--SMKKMTEKDY---KLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPA  152 (604)
T ss_dssp             HHHHHSCCCEEEECCCCCCCB--CTTTCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred             HHHHcCCCCEEEECCCCCCCC--ChhhCCHHHH---HHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHH
Confidence               246789999999875321  1122333333   45778887533   23555666554 34677655443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.98  E-value=8e-06  Score=79.69  Aligned_cols=72  Identities=28%  Similarity=0.381  Sum_probs=54.7

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCCce
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+   +.++      ..+..|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999 899999999999999999999999998888877652   111    12222   1110      235789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus        82 ~lv~nAg~~   90 (256)
T 1geg_A           82 VIVNNAGVA   90 (256)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999865

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.98  E-value=7.3e-06  Score=81.50  Aligned_cols=77  Identities=26%  Similarity=0.307  Sum_probs=54.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-------HHHHHHHHH---cCcc----ccccc---cccc-
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-------RARELAETV---GGHA----LSLAD---LENF-  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-------~a~~la~~~---~~~~----~~~~~---~~~~-  440 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.+       +++++++++   +...    +++.+   +.++ 
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            5678999999999 89999999999999999999999876       344444444   2211    12222   1110 


Q ss_pred             -----CCCCceEEEEcCCCCC
Q 009464          441 -----NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 -----~~~~~divVn~t~~g~  456 (534)
                           ..+..|+|||++++..
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~  105 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAIN  105 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence                 2347899999998763

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.98  E-value=6.7e-06  Score=79.65  Aligned_cols=77  Identities=29%  Similarity=0.405  Sum_probs=57.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ...    .++.+   +.++      ..
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4578899999999 899999999999999999999999998888776652   111    12221   1110      12


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|+|||+++...
T Consensus        87 ~~~d~vi~~Ag~~~  100 (255)
T 1fmc_A           87 GKVDILVNNAGGGG  100 (255)
T ss_dssp             SSCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            47899999998653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.98  E-value=8.8e-06  Score=79.09  Aligned_cols=75  Identities=28%  Similarity=0.368  Sum_probs=54.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHcCcc----ccccc---cccc------CCCCc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~  445 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+. +++++..+..+...    .++.+   +.++      ..+..
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            357899999999 8999999999999999999999998 77665444433221    12222   1110      13578


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+|||++++.
T Consensus        84 d~lv~nAg~~   93 (249)
T 2ew8_A           84 DILVNNAGIY   93 (249)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999875

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.98  E-value=8.2e-06  Score=80.75  Aligned_cols=77  Identities=17%  Similarity=0.200  Sum_probs=56.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC------------HHHHHHHHHHHc---Ccc----cccccc--
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETVG---GHA----LSLADL--  437 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~------------~~~a~~la~~~~---~~~----~~~~~~--  437 (534)
                      ..+++|++||+|+ ||+|++++..|++.|++|++++|+            .++.+++...+.   ...    .++.+.  
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            4578999999999 899999999999999999999987            677776665542   111    122221  


Q ss_pred             -ccc------CCCCceEEEEcCCCCC
Q 009464          438 -ENF------NPEDGMILANTTSIGM  456 (534)
Q Consensus       438 -~~~------~~~~~divVn~t~~g~  456 (534)
                       .++      ..+..|+|||++++..
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~  111 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICP  111 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCc
Confidence             110      2347899999998753

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.97  E-value=1.1e-05  Score=79.23  Aligned_cols=74  Identities=24%  Similarity=0.343  Sum_probs=55.6

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-----c----cccccc---ccc------CC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----A----LSLADL---ENF------NP  442 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-----~----~~~~~~---~~~------~~  442 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...     .    .++.+.   .++      ..
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            56899999999 89999999999999999999999999888777666321     1    122221   110      12


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||+++..
T Consensus        85 g~id~lv~~Ag~~   97 (267)
T 2gdz_A           85 GRLDILVNNAGVN   97 (267)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999865

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.97  E-value=7e-06  Score=81.46  Aligned_cols=75  Identities=23%  Similarity=0.258  Sum_probs=54.8

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHcC---cc----ccccccc---cc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGG---HA----LSLADLE---NF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~~---~~----~~~~~~~---~~------~~  442 (534)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++| +.++++++++++..   ..    .++.+.+   ++      ..
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            567899999999 89999999999999999999985 88888888776631   11    1222221   10      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus       106 g~iD~lvnnAg~~  118 (280)
T 4da9_A          106 GRIDCLVNNAGIA  118 (280)
T ss_dssp             SCCCEEEEECC--
T ss_pred             CCCCEEEECCCcc
Confidence            4789999999873

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.97  E-value=6.8e-06  Score=81.06  Aligned_cols=76  Identities=26%  Similarity=0.393  Sum_probs=56.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHc---Ccc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~~----~~~~~---~~~~------~  441 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++..| +.++++++.+.+.   ...    .++.+   +.++      .
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999 89999999999999999999887 7777777776653   111    12222   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||++++.
T Consensus       104 ~g~id~lv~nAg~~  117 (269)
T 4dmm_A          104 WGRLDVLVNNAGIT  117 (269)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            34789999999875

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.96  E-value=1.2e-05  Score=79.21  Aligned_cols=76  Identities=18%  Similarity=0.286  Sum_probs=57.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      ..+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ...    .++.+   +.++      ..
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            4578999999999 899999999999999999999999998888776652   111    12221   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus       107 g~iD~li~~Ag~~  119 (272)
T 1yb1_A          107 GDVSILVNNAGVV  119 (272)
T ss_dssp             CCCSEEEECCCCC
T ss_pred             CCCcEEEECCCcC
Confidence            5789999999865

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.96  E-value=1.3e-05  Score=79.06  Aligned_cols=77  Identities=26%  Similarity=0.322  Sum_probs=57.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----ccccc---cccc------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LENF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~---~~~~------  440 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++..     ..    .++.+   +.++      
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999 8999999999999999999999999988888766521     11    12221   1110      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+.+|+|||+++...
T Consensus       108 ~~g~iD~vi~~Ag~~~  123 (279)
T 1xg5_A          108 QHSGVDICINNAGLAR  123 (279)
T ss_dssp             HHCCCSEEEECCCCCC
T ss_pred             hCCCCCEEEECCCCCC
Confidence            1246899999998653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.96  E-value=1.3e-05  Score=78.82  Aligned_cols=76  Identities=22%  Similarity=0.338  Sum_probs=57.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--cc----ccccc---cccc------CCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~~~---~~~~------~~~  443 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..  ..    .++.+   +.++      ..+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4578899999999 8999999999999999999999999888888777642  11    12222   1110      124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||+++..
T Consensus        92 ~id~li~~Ag~~  103 (278)
T 2bgk_A           92 KLDIMFGNVGVL  103 (278)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCccc
Confidence            689999999865

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.96  E-value=1e-05  Score=78.66  Aligned_cols=77  Identities=22%  Similarity=0.277  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.   ...    .++.+   +.++      ..
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4577899999999 899999999999999999999999988887776652   111    12222   1110      12


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|+|||+++...
T Consensus        89 ~~id~vi~~Ag~~~  102 (260)
T 3awd_A           89 GRVDILVACAGICI  102 (260)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            46899999998653

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.96  E-value=7.5e-06  Score=80.07  Aligned_cols=74  Identities=26%  Similarity=0.346  Sum_probs=54.9

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHHH----cCcc----ccccc---cccc------CC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-ARELAETV----GGHA----LSLAD---LENF------NP  442 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~-a~~la~~~----~~~~----~~~~~---~~~~------~~  442 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++ ++++++++    +...    .++.+   +.++      ..
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            45799999999 899999999999999999999999887 77776655    2221    12222   1110      12


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus        82 g~iD~lv~~Ag~~   94 (260)
T 1x1t_A           82 GRIDILVNNAGIQ   94 (260)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999875

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.96  E-value=1.7e-05  Score=78.96  Aligned_cols=76  Identities=26%  Similarity=0.390  Sum_probs=57.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH----cCcc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~----~~~~----~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++    +...    .++.+   +.++      .
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            4578999999999 89999999999999999999999999888777665    2211    12221   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||+++..
T Consensus       102 ~g~id~li~~Ag~~  115 (302)
T 1w6u_A          102 AGHPNIVINNAAGN  115 (302)
T ss_dssp             TCSCSEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            35689999999865

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.95  E-value=5.1e-06  Score=80.56  Aligned_cols=75  Identities=25%  Similarity=0.407  Sum_probs=55.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-c--cccccc---cccc--CCCCceEEEEc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--ALSLAD---LENF--NPEDGMILANT  451 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~--~~~~~~---~~~~--~~~~~divVn~  451 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++. ++.. .  ..++.+   +.+.  ..+..|+|||+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            357899999999 89999999999999999999999998877665 4321 1  112221   1110  24578999999


Q ss_pred             CCCCC
Q 009464          452 TSIGM  456 (534)
Q Consensus       452 t~~g~  456 (534)
                      ++...
T Consensus        82 Ag~~~   86 (246)
T 2ag5_A           82 AGFVH   86 (246)
T ss_dssp             CCCCC
T ss_pred             CccCC
Confidence            98753

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.95  E-value=1.1e-05  Score=78.00  Aligned_cols=76  Identities=28%  Similarity=0.369  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--cc----ccccc---cccc------CCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPED  444 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--~~----~~~~~---~~~~------~~~~  444 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+..  ..    .++.+   +.++      ..+.
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            367899999999 8999999999999999999999999988888777642  11    12221   1110      1246


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||+++...
T Consensus        83 id~li~~Ag~~~   94 (251)
T 1zk4_A           83 VSTLVNNAGIAV   94 (251)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            899999998753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.95  E-value=1e-05  Score=79.23  Aligned_cols=75  Identities=23%  Similarity=0.217  Sum_probs=55.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|+++ .|+.++++++.+++..   ..    .++.+   +.++      ..
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            567899999999 899999999999999999888 7777777777766532   11    12222   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||+++..
T Consensus        85 g~id~lv~nAg~~   97 (259)
T 3edm_A           85 GEIHGLVHVAGGL   97 (259)
T ss_dssp             CSEEEEEECCCCC
T ss_pred             CCCCEEEECCCcc
Confidence            5789999999864

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.95  E-value=1.1e-05  Score=78.09  Aligned_cols=72  Identities=26%  Similarity=0.301  Sum_probs=54.4

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH-c---Ccc----ccccc---cccc------CCCCc
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV-G---GHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~-~---~~~----~~~~~---~~~~------~~~~~  445 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++ .   ...    .++.+   +.++      ..+..
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            588999999 89999999999999999999999999988887776 2   111    12222   1110      12468


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |+|||+++..
T Consensus        82 d~li~~Ag~~   91 (250)
T 2cfc_A           82 DVLVNNAGIT   91 (250)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999865

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.94  E-value=9.6e-06  Score=80.12  Aligned_cols=77  Identities=30%  Similarity=0.353  Sum_probs=55.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHHc---Ccc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|+++. |+.++++++++++.   ...    .++.+   +.++      .
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999 8999999999999999998885 55677777777663   211    12221   1110      2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||++++..
T Consensus       107 ~g~iD~lvnnAg~~~  121 (271)
T 3v2g_A          107 LGGLDILVNSAGIWH  121 (271)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCcEEEECCCCCC
Confidence            347899999998753

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.94  E-value=7.7e-06  Score=80.82  Aligned_cols=75  Identities=31%  Similarity=0.379  Sum_probs=53.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH-------HHHHHHHH---cCcc----ccccc---cccc--
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-------ARELAETV---GGHA----LSLAD---LENF--  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~-------a~~la~~~---~~~~----~~~~~---~~~~--  440 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++       .+++++.+   +...    .++.+   +.++  
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            568999999999 899999999999999999999998653       44444433   2211    12221   1110  


Q ss_pred             ----CCCCceEEEEcCCCC
Q 009464          441 ----NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ----~~~~~divVn~t~~g  455 (534)
                          ..+..|+|||++++.
T Consensus        83 ~~~~~~g~iD~lvnnAG~~  101 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAI  101 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCcc
Confidence                235789999999875

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.93  E-value=8.5e-06  Score=82.86  Aligned_cols=46  Identities=28%  Similarity=0.369  Sum_probs=41.9

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHH
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETV  427 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~  427 (534)
                      +++|++||+|+ ||+|++++..|++.|++|++++ |+.++++++++++
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l   91 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL   91 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            67899999999 8999999999999999999999 9999988887765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.93  E-value=1.5e-06  Score=85.80  Aligned_cols=77  Identities=18%  Similarity=0.190  Sum_probs=51.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc------CCCCceEEEEcC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF------NPEDGMILANTT  452 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~------~~~~~divVn~t  452 (534)
                      .++++|++||+|+ ||+|++++..|++.|++|++++|+.++....+..+..+..+.+++.++      ..+..|+|||++
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA   89 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNA   89 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4678999999999 899999999999999999999998765422111111111111111110      235789999999


Q ss_pred             CCCC
Q 009464          453 SIGM  456 (534)
Q Consensus       453 ~~g~  456 (534)
                      ++..
T Consensus        90 g~~~   93 (269)
T 3vtz_A           90 GIEQ   93 (269)
T ss_dssp             CCCC
T ss_pred             CcCC
Confidence            8753

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.93  E-value=9.2e-06  Score=79.73  Aligned_cols=77  Identities=18%  Similarity=0.215  Sum_probs=56.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHHHcC---cc----ccccc---cccc-----
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR---TYDRARELAETVGG---HA----LSLAD---LENF-----  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R---~~~~a~~la~~~~~---~~----~~~~~---~~~~-----  440 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|   +.++++++++++..   ..    .++.+   +.++     
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999 89999999999999999999865   45677777777642   11    12222   1110     


Q ss_pred             -CCCCceEEEEcCCCCC
Q 009464          441 -NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 -~~~~~divVn~t~~g~  456 (534)
                       ..+..|+|||++++..
T Consensus        87 ~~~g~iD~lvnnAg~~~  103 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVL  103 (262)
T ss_dssp             HHHCSEEEEEECCCCCC
T ss_pred             HHcCCCCEEEECCCCCC
Confidence             2357899999998753

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.92  E-value=7.8e-06  Score=78.83  Aligned_cols=75  Identities=31%  Similarity=0.461  Sum_probs=56.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH----cCcc----ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~----~~~~----~~~~~---~~~~------~~  442 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+    +...    .++.+   +.++      ..
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            467899999999 89999999999999999999999999888776654    2211    12221   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||+++..
T Consensus        84 ~~~d~vi~~Ag~~   96 (248)
T 2pnf_A           84 DGIDILVNNAGIT   96 (248)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4789999999865

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.91  E-value=1.2e-05  Score=78.70  Aligned_cols=76  Identities=20%  Similarity=0.069  Sum_probs=56.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ...    .++.+   +.++      ..
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4578899999999 899999999999999999999999998888776652   111    12221   1110      11


Q ss_pred             -CCceEEEEcCCCC
Q 009464          443 -EDGMILANTTSIG  455 (534)
Q Consensus       443 -~~~divVn~t~~g  455 (534)
                       +..|+|||++++.
T Consensus        90 ~~~id~li~~Ag~~  103 (266)
T 1xq1_A           90 GGKLDILINNLGAI  103 (266)
T ss_dssp             TTCCSEEEEECCC-
T ss_pred             CCCCcEEEECCCCC
Confidence             5789999999865

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.91  E-value=1.6e-05  Score=80.40  Aligned_cols=77  Identities=23%  Similarity=0.291  Sum_probs=55.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC------------HHHHHHHHHHHc---Ccc----ccccc---
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETVG---GHA----LSLAD---  436 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~------------~~~a~~la~~~~---~~~----~~~~~---  436 (534)
                      ..+++|++||+|+ ||+|++++..|++.|++|++++|+            .++++++++.+.   ...    .++.+   
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            3578999999999 899999999999999999999876            677777665542   111    12221   


Q ss_pred             cccc------CCCCceEEEEcCCCCC
Q 009464          437 LENF------NPEDGMILANTTSIGM  456 (534)
Q Consensus       437 ~~~~------~~~~~divVn~t~~g~  456 (534)
                      +.++      ..+..|+|||++++..
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~  147 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISN  147 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            1110      2357899999998764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.91  E-value=1.5e-05  Score=77.25  Aligned_cols=74  Identities=22%  Similarity=0.306  Sum_probs=53.6

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~  444 (534)
                      .+|+++|+|+ ||+|++++..|++.|++|++..| +.++++++++++.   .+.    .++.+   +.++      ..+.
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999 89999999999999999988765 6788888777653   111    12222   1110      2347


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||++++..
T Consensus        83 id~lv~nAg~~~   94 (246)
T 3osu_A           83 LDVLVNNAGITR   94 (246)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            899999998753

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.91  E-value=1e-05  Score=78.84  Aligned_cols=75  Identities=27%  Similarity=0.387  Sum_probs=55.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++| +.++++++.+.+.   ...    .++.+   +.++      ..
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999 89999999999999999999999 8888887776652   111    12221   1110      12


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||+++..
T Consensus        84 g~id~li~~Ag~~   96 (261)
T 1gee_A           84 GKLDVMINNAGLE   96 (261)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999875

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.90  E-value=1.1e-05  Score=79.33  Aligned_cols=77  Identities=22%  Similarity=0.245  Sum_probs=55.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHc---Ccc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~~----~~~~~---~~~~------~  441 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++| +.+..+++.+.+.   ...    .++.+   +.++      .
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            5688999999999 89999999999999999999999 5666666665542   111    12211   1110      2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||++++..
T Consensus       105 ~g~id~li~nAg~~~  119 (271)
T 4iin_A          105 DGGLSYLVNNAGVVR  119 (271)
T ss_dssp             HSSCCEEEECCCCCC
T ss_pred             cCCCCEEEECCCcCC
Confidence            247899999998753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.90  E-value=8.4e-06  Score=80.53  Aligned_cols=74  Identities=26%  Similarity=0.345  Sum_probs=56.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCceE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~di  447 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.++...    .++.+   +.++      ..+..|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            35789999999 899999999999999999999999999988887764321    12222   1110      1246899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      |||+++..
T Consensus        83 lv~~Ag~~   90 (281)
T 3m1a_A           83 LVNNAGRT   90 (281)
T ss_dssp             EEECCCCE
T ss_pred             EEECCCcC
Confidence            99999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.89  E-value=1.4e-05  Score=79.02  Aligned_cols=75  Identities=39%  Similarity=0.508  Sum_probs=54.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----cccccc---ccc-----CCC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF-----NPE  443 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~---~~~-----~~~  443 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+ ++.+++++++..   ..    .++.+.   .++     ..+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            4678999999999 899999999999999999999987 445566655532   11    122221   110     124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus       106 ~iD~lv~nAg~~  117 (273)
T 3uf0_A          106 RVDVLVNNAGII  117 (273)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCcEEEECCCCC
Confidence            789999999875

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=97.89  E-value=1.4e-05  Score=80.85  Aligned_cols=112  Identities=21%  Similarity=0.191  Sum_probs=77.3

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHc----CcccccccccccCCCCceEEEEcCCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVG----GHALSLADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~-G~-~v~i~~R~~~~a~~la~~~~----~~~~~~~~~~~~~~~~~divVn~t~~g~  456 (534)
                      ..++++|+|+|.+|+..+.+|.+. +. +|.++||+  +++++++++.    ...... ++++ ...++|+||+||+.. 
T Consensus       120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~e-av~~aDIVi~aT~s~-  194 (313)
T 3hdj_A          120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APAD-IAAQADIVVTATRST-  194 (313)
T ss_dssp             TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHH-HHHHCSEEEECCCCS-
T ss_pred             CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHH-HHhhCCEEEEccCCC-
Confidence            358999999999999999999874 56 89999999  8888877653    222122 3443 344689999999864 


Q ss_pred             CCCCCCCCCCccccCCCCEEEEEec-CCChhHHHHHHHHCC-CeEeccHH
Q 009464          457 QPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESG-ATIVSGLE  504 (534)
Q Consensus       457 ~~~~~~~~i~~~~l~~~~~v~Dv~y-~p~~T~ll~~A~~~G-~~ii~Gl~  504 (534)
                      .|     .+..++++++..+.|+-. .|...++-....+++ ..+++-.+
T Consensus       195 ~p-----vl~~~~l~~G~~V~~vGs~~p~~~El~~~~~~~a~~v~vD~~~  239 (313)
T 3hdj_A          195 TP-----LFAGQALRAGAFVGAIGSSLPHTRELDDEALRRARAVVVEWRE  239 (313)
T ss_dssp             SC-----SSCGGGCCTTCEEEECCCSSTTCCCCCHHHHHHCSEEEESCHH
T ss_pred             Cc-----ccCHHHcCCCcEEEECCCCCCchhhcCHHHHhcCCEEEECCHH
Confidence            22     245678899999999864 465444433333343 34677554

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.89  E-value=1.2e-05  Score=80.28  Aligned_cols=48  Identities=33%  Similarity=0.533  Sum_probs=43.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  427 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~  427 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l   62 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL   62 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            4578899999999 89999999999999999999999999888887765

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.88  E-value=1.2e-05  Score=78.42  Aligned_cols=72  Identities=22%  Similarity=0.342  Sum_probs=53.9

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH--HHHHHHHHcC---cc----ccccc---cccc------CCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR--ARELAETVGG---HA----LSLAD---LENF------NPED  444 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~--a~~la~~~~~---~~----~~~~~---~~~~------~~~~  444 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++  ++++++++..   ..    .++.+   +.++      ..+.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            589999999 899999999999999999999999887  7777766631   11    12222   1110      1347


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+|||++++.
T Consensus        82 iD~lv~nAg~~   92 (258)
T 3a28_C           82 FDVLVNNAGIA   92 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.87  E-value=1.4e-05  Score=79.79  Aligned_cols=76  Identities=25%  Similarity=0.305  Sum_probs=53.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHHHc---Ccc----cccccc---ccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-ARELAETVG---GHA----LSLADL---ENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~-a~~la~~~~---~~~----~~~~~~---~~~------~  441 (534)
                      .++++|++||+|+ ||+|++++..|++.|++|++++|+.++ .+.+.+.+.   ...    .++.+.   .++      .
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999 899999999999999999999998764 333433332   111    122221   110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||+++..
T Consensus       123 ~g~iD~lvnnAg~~  136 (291)
T 3ijr_A          123 LGSLNILVNNVAQQ  136 (291)
T ss_dssp             HSSCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCc
Confidence            35789999999865

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.87  E-value=1e-05  Score=79.79  Aligned_cols=76  Identities=28%  Similarity=0.328  Sum_probs=53.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHc---Ccc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++. .|+.++++++++.+.   ...    .++.+   +.++      .
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3457899999999 899999999999999998886 677777887776653   111    12222   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||++++.
T Consensus       103 ~g~iD~lvnnAG~~  116 (267)
T 3u5t_A          103 FGGVDVLVNNAGIM  116 (267)
T ss_dssp             HSCEEEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            35789999999875

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.87  E-value=1.6e-05  Score=81.49  Aligned_cols=77  Identities=35%  Similarity=0.415  Sum_probs=55.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH-------HHHHHHHH---cCcc----ccccc---cccc-
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-------ARELAETV---GGHA----LSLAD---LENF-  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~-------a~~la~~~---~~~~----~~~~~---~~~~-  440 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++       .+++++++   +...    +++.+   +.++ 
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            4688999999999 899999999999999999999998764       33444443   2221    12222   1110 


Q ss_pred             -----CCCCceEEEEcCCCCC
Q 009464          441 -----NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 -----~~~~~divVn~t~~g~  456 (534)
                           ..+..|+|||++++..
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~  141 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAIS  141 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence                 2357899999998753

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.86  E-value=1.4e-05  Score=82.69  Aligned_cols=100  Identities=19%  Similarity=0.267  Sum_probs=66.4

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-c---ccccccccCCCCceEEEEcCCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-L---SLADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~---~~~~~~~~~~~~~divVn~t~~g~  456 (534)
                      .+.+++++|+|+|++|++++..+...|++|++++|+.++.+.+.+.++... .   +.+++.+ ....+|+||+|++...
T Consensus       163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~-~~~~~DvVi~~~g~~~  241 (369)
T 2eez_A          163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKK-SVQHADLLIGAVLVPG  241 (369)
T ss_dssp             BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHH-HHHHCSEEEECCC---
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHH-HHhCCCEEEECCCCCc
Confidence            467899999999999999999999999999999999999888776565431 1   1222333 2346899999998642


Q ss_pred             CCCCCCCCCCc---cccCCCCEEEEEecCC
Q 009464          457 QPKVDETPIPK---HALGHYALVFDAVYTP  483 (534)
Q Consensus       457 ~~~~~~~~i~~---~~l~~~~~v~Dv~y~p  483 (534)
                      ...  ...+..   ..++++..++|+...+
T Consensus       242 ~~~--~~li~~~~l~~mk~gg~iV~v~~~~  269 (369)
T 2eez_A          242 AKA--PKLVTRDMLSLMKEGAVIVDVAVDQ  269 (369)
T ss_dssp             ------CCSCHHHHTTSCTTCEEEECC---
T ss_pred             ccc--chhHHHHHHHhhcCCCEEEEEecCC
Confidence            110  111222   2345677888888653

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.86  E-value=9.9e-06  Score=82.00  Aligned_cols=77  Identities=30%  Similarity=0.438  Sum_probs=56.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC----------HHHHHHHHHHHc---Ccc----ccccc---cc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT----------YDRARELAETVG---GHA----LSLAD---LE  438 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~----------~~~a~~la~~~~---~~~----~~~~~---~~  438 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+          .++++++++++.   ...    .++.+   +.
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  102 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA  102 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            3578999999999 899999999999999999999998          677777776663   111    12222   11


Q ss_pred             cc------CCCCceEEEEcCCCCC
Q 009464          439 NF------NPEDGMILANTTSIGM  456 (534)
Q Consensus       439 ~~------~~~~~divVn~t~~g~  456 (534)
                      ++      ..+..|+|||++++..
T Consensus       103 ~~~~~~~~~~g~iD~lv~nAg~~~  126 (322)
T 3qlj_A          103 GLIQTAVETFGGLDVLVNNAGIVR  126 (322)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC
Confidence            10      2347899999998753

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.86  E-value=2.1e-05  Score=78.03  Aligned_cols=76  Identities=18%  Similarity=0.256  Sum_probs=57.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..   ..    .++.+   +.++      ..
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            4567899999999 8999999999999999999999999988888776632   11    12222   1110      23


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus       120 ~~id~li~~Ag~~  132 (285)
T 2c07_A          120 KNVDILVNNAGIT  132 (285)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            5689999999875

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.85  E-value=2.9e-05  Score=75.77  Aligned_cols=47  Identities=30%  Similarity=0.434  Sum_probs=42.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHHHH
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKA---KGARVVIANRTYDRARELAETV  427 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~---~G~~v~i~~R~~~~a~~la~~~  427 (534)
                      .+++|+++|+|+ ||+|++++..|++   .|++|++++|+.++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l   53 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL   53 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHH
Confidence            467899999999 8999999999999   8999999999999988887766

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.85  E-value=2.6e-05  Score=74.69  Aligned_cols=73  Identities=26%  Similarity=0.287  Sum_probs=54.9

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cc--ccccc---cccc------CCCCceEEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF------NPEDGMILA  449 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~--~~~~~---~~~~------~~~~~divV  449 (534)
                      .+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.. ..  .++.+   +.++      ..+..|+||
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999 8999999999999999999999999998888776531 11  12221   1110      124689999


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      |+++.+
T Consensus        84 ~~Ag~~   89 (234)
T 2ehd_A           84 NNAGVG   89 (234)
T ss_dssp             ECCCCC
T ss_pred             ECCCcC
Confidence            999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.85  E-value=1.3e-05  Score=78.94  Aligned_cols=77  Identities=21%  Similarity=0.290  Sum_probs=55.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHHc---Ccc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++.. |+.++++++++++.   ...    .++.+   +.++      .
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999 8999999999999999998865 56677777776653   211    12222   1110      2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||++++..
T Consensus        94 ~g~id~lvnnAg~~~  108 (270)
T 3is3_A           94 FGHLDIAVSNSGVVS  108 (270)
T ss_dssp             HSCCCEEECCCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            357899999998763

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.85  E-value=1e-05  Score=78.47  Aligned_cols=74  Identities=26%  Similarity=0.264  Sum_probs=54.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+ .++.+++.+++.   ...    .++.+   +.++      ..
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999 899999999999999999999999 777777766652   111    12222   1110      12


Q ss_pred             CCceEEEEcCCC
Q 009464          443 EDGMILANTTSI  454 (534)
Q Consensus       443 ~~~divVn~t~~  454 (534)
                      +..|+|||+++.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            368999999986

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=97.85  E-value=5.1e-05  Score=78.13  Aligned_cols=187  Identities=17%  Similarity=0.190  Sum_probs=109.8

Q ss_pred             cCCCeEEEecccccHHHHHHHhc--CCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEeccCCeEEEEeccHHH
Q 009464          282 VGFNGVFVHLLVDDIAKFFQTYS--SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG  359 (534)
Q Consensus       282 ~gl~~~y~~~~~~~~~~~~~~~~--~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G  359 (534)
                      -|+|..=+.+++.+.++|++.++  .+.|.|++.--=-..+.+..++++-..    .            .+-=+|-|..|
T Consensus       107 agid~~pi~ldv~~~dE~v~~vk~~~p~f~~i~lED~~~p~af~il~r~r~~----~------------~Ipvf~DDiqG  170 (388)
T 1vl6_A          107 ADIDAFPICLSESEEEKIISIVKSLEPSFGGINLEDIGAPKCFRILQRLSEE----M------------NIPVFHDDQQG  170 (388)
T ss_dssp             HCCEEEEEECSCCCHHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHHHHHH----C------------SSCEEEHHHHH
T ss_pred             cCCceEeEEeCCCCHHHHHHHHHHcCCcceEeCHhhcCCHHHHHHHHHhhhh----c------------Ccceecccccc
Confidence            47886666677778888877664  467899876542233444444433221    1            12223445444


Q ss_pred             HH----HHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC----HHHH--------HH
Q 009464          360 AI----SAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT----YDRA--------RE  422 (534)
Q Consensus       360 ~~----~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~----~~~a--------~~  422 (534)
                      -.    .++...++-       .+.++++.+++|+|||.+|.+++..|...|+ +|+++||+    .++.        +.
T Consensus       171 TasV~lAal~~A~~i-------~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~  243 (388)
T 1vl6_A          171 TAVVVSAAFLNALKL-------TEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLE  243 (388)
T ss_dssp             HHHHHHHHHHHHHHH-------HTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHH
T ss_pred             HHHHHHHHHHHHHHH-------hCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHH
Confidence            21    122221210       1236788999999999999999999999999 89999998    6653        33


Q ss_pred             HHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccc---cCCCCEEEEEecCCC--hhHHHHHHHHCC-
Q 009464          423 LAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA---LGHYALVFDAVYTPK--ITRLLREAEESG-  496 (534)
Q Consensus       423 la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~---l~~~~~v~Dv~y~p~--~T~ll~~A~~~G-  496 (534)
                      +++... ......++.+ ....+|++|-++..+        .+.++.   +.++.++||+. +|.  .||  ..|.+.| 
T Consensus       244 ~A~~~~-~~~~~~~L~e-av~~ADVlIG~Sap~--------l~t~emVk~Ma~~pIIfalS-NPt~E~~p--~~a~~~g~  310 (388)
T 1vl6_A          244 IARITN-PERLSGDLET-ALEGADFFIGVSRGN--------ILKPEWIKKMSRKPVIFALA-NPVPEIDP--ELAREAGA  310 (388)
T ss_dssp             HHHTSC-TTCCCSCHHH-HHTTCSEEEECSCSS--------CSCHHHHTTSCSSCEEEECC-SSSCSSCH--HHHHHTTC
T ss_pred             HHHhhh-ccCchhhHHH-HHccCCEEEEeCCCC--------ccCHHHHHhcCCCCEEEEcC-CCCCCCCH--HHHHHhcC
Confidence            443322 1112334444 455689999886521        123222   34567999998 454  444  4455556 


Q ss_pred             CeEeccHH
Q 009464          497 ATIVSGLE  504 (534)
Q Consensus       497 ~~ii~Gl~  504 (534)
                      +-+-.|.+
T Consensus       311 ~i~atGr~  318 (388)
T 1vl6_A          311 FIVATGRS  318 (388)
T ss_dssp             SEEEESCT
T ss_pred             eEEEeCCC
Confidence            33445643

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.84  E-value=1.2e-05  Score=78.31  Aligned_cols=47  Identities=28%  Similarity=0.380  Sum_probs=42.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  427 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~  427 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   51 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL   51 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Confidence            467899999999 89999999999999999999999999888876654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.83  E-value=2e-05  Score=78.70  Aligned_cols=76  Identities=25%  Similarity=0.269  Sum_probs=53.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC--HHHHHHHHHHH---cCcc----cccccc---ccc------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT--YDRARELAETV---GGHA----LSLADL---ENF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~--~~~a~~la~~~---~~~~----~~~~~~---~~~------  440 (534)
                      ..+++|++||+|+ ||+|++++..|++.|++|++++|+  .++++++.+.+   +...    .++.+.   .++      
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999 899999999999999999999886  34455554443   2221    122221   110      


Q ss_pred             CCCCceEEEEcCCCC
Q 009464          441 NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ~~~~~divVn~t~~g  455 (534)
                      ..+..|+|||++++.
T Consensus       125 ~~g~iD~lv~nAg~~  139 (294)
T 3r3s_A          125 ALGGLDILALVAGKQ  139 (294)
T ss_dssp             HHTCCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCCc
Confidence            235789999999875

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.83  E-value=2e-05  Score=79.91  Aligned_cols=77  Identities=23%  Similarity=0.355  Sum_probs=56.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE---------eCCHHHHHHHHHHHcC---c-cccccccc---cc--
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA---------NRTYDRARELAETVGG---H-ALSLADLE---NF--  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~---------~R~~~~a~~la~~~~~---~-~~~~~~~~---~~--  440 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.         .|+.++++++++++..   . ..++.+..   ++  
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence            4578999999999 899999999999999999996         4577888887776631   1 12222221   10  


Q ss_pred             ----CCCCceEEEEcCCCCC
Q 009464          441 ----NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ----~~~~~divVn~t~~g~  456 (534)
                          ..+..|+|||++++..
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~  104 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILR  104 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCC
Confidence                2457899999998753

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.82  E-value=1.9e-05  Score=76.93  Aligned_cols=74  Identities=20%  Similarity=0.257  Sum_probs=55.2

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHc---Ccc----cccccc---ccc------CCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKA-KGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPED  444 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~-~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~~---~~~------~~~~  444 (534)
                      ++|+++|+|+ ||+|++++..|++ .|++|++++|+.++++++.+.+.   ...    .++.+.   .++      ..+.
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999 8999999999999 99999999999998888776652   111    122221   110      1237


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      +|+|||++++..
T Consensus        83 id~li~~Ag~~~   94 (276)
T 1wma_A           83 LDVLVNNAGIAF   94 (276)
T ss_dssp             EEEEEECCCCCC
T ss_pred             CCEEEECCcccc
Confidence            899999998753

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.81  E-value=1.4e-05  Score=77.99  Aligned_cols=72  Identities=28%  Similarity=0.332  Sum_probs=50.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH---cCcc----ccccc---cccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~----~~~~~---~~~~------~~~~  444 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.+  +++.+++   +...    .++.+   +.++      ..+.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999 89999999999999999999999865  3344443   2111    12222   1110      1247


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+|||++++.
T Consensus        80 id~lv~~Ag~~   90 (255)
T 2q2v_A           80 VDILVNNAGIQ   90 (255)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999875

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.81  E-value=2.3e-05  Score=75.82  Aligned_cols=72  Identities=24%  Similarity=0.265  Sum_probs=49.0

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---------ccccCCCCceEEE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---------LENFNPEDGMILA  449 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---------~~~~~~~~~divV  449 (534)
                      +++|+++|+|+ ||+|++++..|++ |++|++++|+.++.+++++..+...  .++.+         ..+ ..+..|+||
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~id~lv   80 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLK-NLDHVDTLV   80 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGT-TCSCCSEEE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHH-hcCCCCEEE
Confidence            56899999999 8999999999988 8999999999999888765211111  11111         111 245789999


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      |++++.
T Consensus        81 ~~Ag~~   86 (245)
T 3e9n_A           81 HAAAVA   86 (245)
T ss_dssp             ECC---
T ss_pred             ECCCcC
Confidence            999875

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.80  E-value=2.8e-05  Score=80.71  Aligned_cols=98  Identities=23%  Similarity=0.253  Sum_probs=69.4

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-c---ccccccccCCCCceEEEEcCCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-L---SLADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~---~~~~~~~~~~~~~divVn~t~~g~  456 (534)
                      .+.+++++|+|+|++|++++..+...|++|++++|+.++.+.+.+.++... .   ...++.+ ....+|+||+|++...
T Consensus       165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~-~l~~aDvVi~~~~~p~  243 (377)
T 2vhw_A          165 GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEG-AVKRADLVIGAVLVPG  243 (377)
T ss_dssp             TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHH-HHHHCSEEEECCCCTT
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHH-HHcCCCEEEECCCcCC
Confidence            467899999999999999999999999999999999999888776665432 0   1222333 2346899999987653


Q ss_pred             CCCCCCCCCCc---cccCCCCEEEEEec
Q 009464          457 QPKVDETPIPK---HALGHYALVFDAVY  481 (534)
Q Consensus       457 ~~~~~~~~i~~---~~l~~~~~v~Dv~y  481 (534)
                      . . ....+..   ..++++.+++|+..
T Consensus       244 ~-~-t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          244 A-K-APKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             S-C-CCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             C-C-CcceecHHHHhcCCCCcEEEEEec
Confidence            2 1 1111222   23566778888875

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.79  E-value=2.5e-05  Score=77.44  Aligned_cols=48  Identities=31%  Similarity=0.542  Sum_probs=43.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  427 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~  427 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   72 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC   72 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            3478899999999 89999999999999999999999999988877654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.79  E-value=1.8e-05  Score=77.42  Aligned_cols=76  Identities=20%  Similarity=0.320  Sum_probs=56.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHc---Ccc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~---~~~----~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++| +.++.+++.+++.   ...    .++.+   +.++      .
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999 89999999999999999999999 8888877766552   111    12222   1110      1


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||+++..
T Consensus        97 ~~~~d~vi~~Ag~~  110 (274)
T 1ja9_A           97 FGGLDFVMSNSGME  110 (274)
T ss_dssp             HSCEEEEECCCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            24789999999875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.79  E-value=8e-05  Score=74.93  Aligned_cols=74  Identities=18%  Similarity=0.184  Sum_probs=55.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----Cc-----cccccc---ccccCCCCceE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GH-----ALSLAD---LENFNPEDGMI  447 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~-----~~~~~~---~~~~~~~~~di  447 (534)
                      .+++++++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+.+.    ..     ..++.+   +.+ ....+|+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~   86 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE-VIKGAAG   86 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT-TTTTCSE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH-HHcCCCE
Confidence            356899999999 999999999999999999999999988777665431    11     122222   223 3457899


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      |||+++..
T Consensus        87 vih~A~~~   94 (342)
T 1y1p_A           87 VAHIASVV   94 (342)
T ss_dssp             EEECCCCC
T ss_pred             EEEeCCCC
Confidence            99999764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.78  E-value=2e-05  Score=78.11  Aligned_cols=76  Identities=21%  Similarity=0.361  Sum_probs=53.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHHH---cCcc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-ARELAETV---GGHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~-a~~la~~~---~~~~----~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++ .+++++.+   +.+.    .++.+   +.++      .
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999 899999999999999999999998654 45554444   2211    12211   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||++++.
T Consensus       105 ~g~iD~lv~~Ag~~  118 (283)
T 1g0o_A          105 FGKLDIVCSNSGVV  118 (283)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            34689999999875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.78  E-value=2.9e-06  Score=83.63  Aligned_cols=75  Identities=27%  Similarity=0.304  Sum_probs=51.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccc-------cccCCCCceEEEEc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL-------ENFNPEDGMILANT  451 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~-------~~~~~~~~divVn~  451 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++. ..+..+..+.+++       .+ ..+..|+|||+
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~Dv~~~~~~~~~~~~~~~-~~g~iD~lvnn  101 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-LHLPGDLREAAYADGLPGAVAA-GLGRLDIVVNN  101 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-EECCCCTTSHHHHHHHHHHHHH-HHSCCCEEEEC
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-hccCcCCCCHHHHHHHHHHHHH-hcCCCCEEEEC
Confidence            4578999999999 8999999999999999999999987654322 0011111111111       11 23578999999


Q ss_pred             CCCCC
Q 009464          452 TSIGM  456 (534)
Q Consensus       452 t~~g~  456 (534)
                      +++..
T Consensus       102 Ag~~~  106 (266)
T 3uxy_A          102 AGVIS  106 (266)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            98763

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.77  E-value=5.1e-05  Score=75.81  Aligned_cols=77  Identities=21%  Similarity=0.270  Sum_probs=54.0

Q ss_pred             ccccCCcEEEEEcC-c--hhHHHHHHHHHHCCCeEEEEeCCHHHHH---HHHHHHcCc-c--ccccc---cccc------
Q 009464          379 SSALAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYDRAR---ELAETVGGH-A--LSLAD---LENF------  440 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-G--G~graia~~L~~~G~~v~i~~R~~~~a~---~la~~~~~~-~--~~~~~---~~~~------  440 (534)
                      ...+++|+++|+|+ |  |+|++++..|++.|++|++++|+.+..+   ++.+..+.. .  +++.+   +.++      
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            34678999999999 4  9999999999999999999999975443   333443321 1  12222   1110      


Q ss_pred             CCCCceEEEEcCCCC
Q 009464          441 NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ~~~~~divVn~t~~g  455 (534)
                      ..+..|+|||++++.
T Consensus       105 ~~g~iD~lVnnAG~~  119 (296)
T 3k31_A          105 EWGSLDFVVHAVAFS  119 (296)
T ss_dssp             HHSCCSEEEECCCCC
T ss_pred             HcCCCCEEEECCCcC
Confidence            235789999999875

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.77  E-value=4.1e-05  Score=74.39  Aligned_cols=73  Identities=25%  Similarity=0.280  Sum_probs=51.8

Q ss_pred             ccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-c-ccc-cccccc--CCCCceEEEEcC
Q 009464          379 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-A-LSL-ADLENF--NPEDGMILANTT  452 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-~-~~~-~~~~~~--~~~~~divVn~t  452 (534)
                      ...+++|+++|+|+ ||+|++++..|++.|++|++++|+.+.++++    +.. . .++ +++.++  .....|+|||++
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~iD~lv~~A   89 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS----GHRYVVCDLRKDLDLLFEKVKEVDILVLNA   89 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT----CSEEEECCTTTCHHHHHHHSCCCSEEEECC
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh----CCeEEEeeHHHHHHHHHHHhcCCCEEEECC
Confidence            35688999999999 8999999999999999999999998654433    211 1 122 111110  223689999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus        90 g~~   92 (249)
T 1o5i_A           90 GGP   92 (249)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            865

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.77  E-value=3.2e-05  Score=75.27  Aligned_cols=76  Identities=22%  Similarity=0.299  Sum_probs=53.8

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH----cCcc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~----~~~~----~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++    +...    .++.+   +.++      .
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            4578899999999 89999999999999999999999766554443333    3221    12221   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||+++..
T Consensus        90 ~~~id~li~~Ag~~  103 (265)
T 1h5q_A           90 LGPISGLIANAGVS  103 (265)
T ss_dssp             SCSEEEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            35689999999875

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.76  E-value=3.5e-05  Score=74.18  Aligned_cols=72  Identities=18%  Similarity=0.308  Sum_probs=54.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCC-------eEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc-----
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGA-------RVVIANRTYDRARELAETVGG---HA----LSLAD---LENF-----  440 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~-------~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~-----  440 (534)
                      +|+++|+|+ ||+|++++..|++.|+       +|++++|+.++.+++.+++..   ..    .++.+   +.++     
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            578999999 8999999999999999       999999999998888777632   11    12221   1110     


Q ss_pred             -CCCCceEEEEcCCCC
Q 009464          441 -NPEDGMILANTTSIG  455 (534)
Q Consensus       441 -~~~~~divVn~t~~g  455 (534)
                       ..+..|+|||+++..
T Consensus        82 ~~~g~id~li~~Ag~~   97 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVG   97 (244)
T ss_dssp             HHTSCCSEEEECCCCC
T ss_pred             HhCCCCCEEEEcCCcC
Confidence             234689999999875

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.76  E-value=6.1e-05  Score=75.16  Aligned_cols=76  Identities=20%  Similarity=0.260  Sum_probs=52.8

Q ss_pred             cccCCcEEEEEcC-ch--hHHHHHHHHHHCCCeEEEEeCCHHHH---HHHHHHHcCc---cccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GG--AGKALAYGAKAKGARVVIANRTYDRA---RELAETVGGH---ALSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG--~graia~~L~~~G~~v~i~~R~~~~a---~~la~~~~~~---~~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+ |+  +|++++..|++.|++|++++|+.+..   +++.+..+..   .+++.+   +.++      .
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            3578999999998 55  99999999999999999999996433   3344443321   112221   1110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||++++.
T Consensus       107 ~g~iD~lVnnAG~~  120 (293)
T 3grk_A          107 WGKLDFLVHAIGFS  120 (293)
T ss_dssp             TSCCSEEEECCCCC
T ss_pred             cCCCCEEEECCccC
Confidence            45789999999875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.75  E-value=5.7e-06  Score=80.91  Aligned_cols=74  Identities=18%  Similarity=0.226  Sum_probs=49.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccc-------cccCCCCceEEEEc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL-------ENFNPEDGMILANT  451 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~-------~~~~~~~~divVn~  451 (534)
                      ..+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++ ..+..+..+.+++       .+ ..+..|+|||+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~Dl~d~~~v~~~~~~~~~-~~g~iD~lv~n   94 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF-LAVKCDITDTEQVEQAYKEIEE-THGPVEVLIAN   94 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-EEEECCTTSHHHHHHHHHHHHH-HTCSCSEEEEE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhccc-eEEEecCCCHHHHHHHHHHHHH-HcCCCCEEEEC
Confidence            4677899999999 8999999999999999999999987654320 0000111111111       11 24568999999


Q ss_pred             CCCC
Q 009464          452 TSIG  455 (534)
Q Consensus       452 t~~g  455 (534)
                      +++.
T Consensus        95 Ag~~   98 (253)
T 2nm0_A           95 AGVT   98 (253)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.75  E-value=1.8e-05  Score=76.25  Aligned_cols=74  Identities=28%  Similarity=0.335  Sum_probs=51.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|+++ .|+.++.+++.+.+.   ...    .++.+   +.++      ..+
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            56799999999 899999999999999999988 778777777666542   111    12222   1110      124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||+++..
T Consensus        83 ~~d~vi~~Ag~~   94 (247)
T 2hq1_A           83 RIDILVNNAGIT   94 (247)
T ss_dssp             CCCEEEECC---
T ss_pred             CCCEEEECCCCC
Confidence            689999999865

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.74  E-value=2.2e-05  Score=74.48  Aligned_cols=70  Identities=13%  Similarity=0.086  Sum_probs=51.0

Q ss_pred             CcEEEEEcC-chhHHHHHHHHH-HCCCeEEEEeCCHH-HHHHHHHHHcC-cc--cccc---cccccCCCCceEEEEcCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAK-AKGARVVIANRTYD-RARELAETVGG-HA--LSLA---DLENFNPEDGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~-~~G~~v~i~~R~~~-~a~~la~~~~~-~~--~~~~---~~~~~~~~~~divVn~t~~  454 (534)
                      .|+++|+|+ |++|++++..|+ +.|++|+++.|+.+ ++++++..... ..  .++.   ++.+ ....+|+|||+++.
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vv~~ag~   83 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQ-AVTNAEVVFVGAME   83 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHH-HHTTCSEEEESCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHH-HHcCCCEEEEcCCC
Confidence            367999998 999999999999 89999999999998 87776522111 11  1222   2223 34568999999874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.74  E-value=7.2e-05  Score=73.22  Aligned_cols=73  Identities=18%  Similarity=0.238  Sum_probs=52.4

Q ss_pred             cCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHcCc-c--ccccc---c-------cccCC
Q 009464          382 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSLAD---L-------ENFNP  442 (534)
Q Consensus       382 l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~-~--~~~~~---~-------~~~~~  442 (534)
                      +++|+++|+|+   ||+|++++..|++.|++|++++|+.   +.++++.+..+.. .  .++.+   +       .+ ..
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-VW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-TC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH-Hc
Confidence            67899999998   5999999999999999999999987   4444554443221 1  12221   1       11 34


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus        86 g~iD~lv~~Ag~~   98 (265)
T 1qsg_A           86 PKFDGFVHSIGFA   98 (265)
T ss_dssp             SSEEEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            5789999999875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.74  E-value=1.2e-05  Score=78.48  Aligned_cols=73  Identities=22%  Similarity=0.289  Sum_probs=48.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc-----CCCCce
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF-----NPEDGM  446 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~-----~~~~~d  446 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++   +.+.++...    .++.+   +.++     ..+..|
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADLGDRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            5678999999999 899999999999999999999996553   333443221    12221   1110     124789


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      +|||++++.
T Consensus        82 ~lv~nAg~~   90 (257)
T 3tl3_A           82 IVVNCAGTG   90 (257)
T ss_dssp             EEEECGGGS
T ss_pred             EEEECCCCC
Confidence            999999865

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.74  E-value=2.9e-05  Score=76.36  Aligned_cols=74  Identities=20%  Similarity=0.210  Sum_probs=54.3

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLAD---LENF------NPED  444 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~  444 (534)
                      ++|+++|+|+ ||+|++++..|++.|++|++. .|+.++++++.+.+.   ...    .++.+   +.++      ..+.
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5789999999 899999999999999998776 899988888877653   111    12221   1110      2346


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||++++..
T Consensus       105 id~li~nAg~~~  116 (272)
T 4e3z_A          105 LDGLVNNAGIVD  116 (272)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            899999998753

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.73  E-value=8e-05  Score=72.27  Aligned_cols=74  Identities=20%  Similarity=0.201  Sum_probs=52.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCe-EEEEeCCH--HHHHHHHHHHcC-cc----cccccc-c---cc------CC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGAR-VVIANRTY--DRARELAETVGG-HA----LSLADL-E---NF------NP  442 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~-v~i~~R~~--~~a~~la~~~~~-~~----~~~~~~-~---~~------~~  442 (534)
                      +++|+++|+|+ ||+|++++..|++.|++ |++++|+.  +..+++.+.... ..    .++.+. +   ++      ..
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            56899999999 89999999999999996 99999986  455666554321 11    222221 1   10      12


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus        83 g~id~lv~~Ag~~   95 (254)
T 1sby_A           83 KTVDILINGAGIL   95 (254)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCccC
Confidence            4689999999864

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.73  E-value=7.1e-05  Score=72.08  Aligned_cols=70  Identities=24%  Similarity=0.379  Sum_probs=50.3

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc--cccc------CCCCceEEEEcC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD--LENF------NPEDGMILANTT  452 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~--~~~~------~~~~~divVn~t  452 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++   +.++++...  .++.+  +.++      ..+..|+|||++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence            589999999 899999999999999999999999876   333333211  12222  1110      234689999999


Q ss_pred             CCCC
Q 009464          453 SIGM  456 (534)
Q Consensus       453 ~~g~  456 (534)
                      +...
T Consensus        79 g~~~   82 (239)
T 2ekp_A           79 AVNV   82 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8753

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.73  E-value=5.7e-05  Score=74.44  Aligned_cols=75  Identities=15%  Similarity=0.254  Sum_probs=53.0

Q ss_pred             cCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHHcC-cc--ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYD---RARELAETVGG-HA--LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~~---~a~~la~~~~~-~~--~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+   ||+|++++..|++.|++|++++|+.+   .++++.+..+. ..  .++.+   +.++      ..+
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56899999998   69999999999999999999999875   44555444331 11  12222   1110      235


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|+|||++++..
T Consensus        84 ~id~lv~nAg~~~   96 (275)
T 2pd4_A           84 SLDFIVHSVAFAP   96 (275)
T ss_dssp             CEEEEEECCCCCC
T ss_pred             CCCEEEECCccCc
Confidence            7899999998753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.73  E-value=2.7e-05  Score=74.87  Aligned_cols=73  Identities=26%  Similarity=0.380  Sum_probs=53.3

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCCc
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i-~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~~  445 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++ .+|+.++.+++.+++.   ...    .++.+   +.++      ..+..
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999 89999999999999999988 5899988887766552   111    12221   1110      23468


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |+|||+++...
T Consensus        81 d~li~~Ag~~~   91 (244)
T 1edo_A           81 DVVVNNAGITR   91 (244)
T ss_dssp             SEEEECCCCCC
T ss_pred             CEEEECCCCCC
Confidence            99999998753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.72  E-value=2.3e-05  Score=76.00  Aligned_cols=48  Identities=33%  Similarity=0.425  Sum_probs=41.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVG  428 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i-~~R~~~~a~~la~~~~  428 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++ ..|+.++++++.+++.
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   53 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ   53 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH
Confidence            467899999999 89999999999999998877 5788888888776653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.72  E-value=8.6e-06  Score=89.76  Aligned_cols=119  Identities=22%  Similarity=0.174  Sum_probs=73.8

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH---cCcc----ccc-cccccc------CCCCc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSL-ADLENF------NPEDG  445 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~----~~~-~~~~~~------~~~~~  445 (534)
                      .+++|+++|+|+ +|+|+++|..|++.|++|++.+|..  ++++++++   +...    .++ ++..++      ..+..
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            578999999999 6999999999999999999998632  23333333   2221    233 221110      24678


Q ss_pred             eEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEeccHHHH
Q 009464          446 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVSGLEMF  506 (534)
Q Consensus       446 divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~Gl~ml  506 (534)
                      |+||||+++....  ....++.+.|   ..++|+|+...   ...+++.++++ +.+||+-.++.
T Consensus       397 DiLVnNAGi~~~~--~~~~~~~~~~---~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~a  456 (604)
T 2et6_A          397 DILVNNAGILRDR--SFAKMSKQEW---DSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTS  456 (604)
T ss_dssp             CEEEECCCCCCCB--CTTTCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             CEEEECCCCCCCC--ChhhCCHHHH---HHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh
Confidence            9999999975321  1122333333   45778887533   23556666654 35677655543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.71  E-value=2.5e-05  Score=76.72  Aligned_cols=76  Identities=18%  Similarity=0.211  Sum_probs=54.9

Q ss_pred             ccCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCHHH-HHHHHHHHcCcc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYDR-ARELAETVGGHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~~~-a~~la~~~~~~~----~~~~~---~~~~------~~~  443 (534)
                      .+++|+++|+|+   ||+|++++..|++.|++|++++|+.++ .+++.++++...    .++.+   +.++      ..+
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            357899999995   899999999999999999999999876 466666554221    12222   1110      123


Q ss_pred             ---CceEEEEcCCCCC
Q 009464          444 ---DGMILANTTSIGM  456 (534)
Q Consensus       444 ---~~divVn~t~~g~  456 (534)
                         ..|+|||++++..
T Consensus        84 ~~~~iD~lv~nAg~~~   99 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMP   99 (269)
T ss_dssp             TTCCEEEEEECCCCCC
T ss_pred             CCCCceEEEECCccCc
Confidence               7899999998753

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.71  E-value=4.6e-06  Score=81.04  Aligned_cols=76  Identities=17%  Similarity=0.252  Sum_probs=52.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc------CCCCceEEEEcC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF------NPEDGMILANTT  452 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~------~~~~~divVn~t  452 (534)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++. .+..+..+.+++.++      ..+..|+|||++
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~A   89 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   89 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc-CeeccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4578899999999 89999999999999999999999876544322 011111111111110      234689999999


Q ss_pred             CCCC
Q 009464          453 SIGM  456 (534)
Q Consensus       453 ~~g~  456 (534)
                      ++..
T Consensus        90 g~~~   93 (247)
T 1uzm_A           90 GLSA   93 (247)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            8753

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.71  E-value=2.9e-05  Score=80.76  Aligned_cols=98  Identities=18%  Similarity=0.192  Sum_probs=68.0

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc--cccc----------------------
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SLAD----------------------  436 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~--~~~~----------------------  436 (534)
                      .+.+++++|+|+|++|++++..+...|++|++++|+.++.+.+.+ ++....  +.++                      
T Consensus       169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCH
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            457899999999999999999999999999999999888776654 654432  1110                      


Q ss_pred             ---ccccCCCCceEEEEcCCCCCCCCCCCCCCCc---cccCCCCEEEEEecC
Q 009464          437 ---LENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYT  482 (534)
Q Consensus       437 ---~~~~~~~~~divVn~t~~g~~~~~~~~~i~~---~~l~~~~~v~Dv~y~  482 (534)
                         +.+ ....+|+||+++.....+.  ...+..   ..++++.+++|+.+.
T Consensus       248 ~~~l~~-~~~~aDvVi~~~~~pg~~~--~~li~~~~l~~mk~g~vivdva~~  296 (384)
T 1l7d_A          248 AEAVLK-ELVKTDIAITTALIPGKPA--PVLITEEMVTKMKPGSVIIDLAVE  296 (384)
T ss_dssp             HHHHHH-HHTTCSEEEECCCCTTSCC--CCCSCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHH-HhCCCCEEEECCccCCCCC--CeeeCHHHHhcCCCCCEEEEEecC
Confidence               222 2346899999985532221  111222   345678899999974

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.71  E-value=5e-05  Score=74.56  Aligned_cols=76  Identities=21%  Similarity=0.272  Sum_probs=53.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHHcC---cc----cccccc---ccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVGG---HA----LSLADL---ENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~~~---~~----~~~~~~---~~~------~~  442 (534)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++ |+.++.+++.+.+..   ..    .++.+.   .++      ..
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467899999999 8999999999999999999988 777777666655421   11    222221   110      23


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|+|||++++..
T Consensus       102 g~id~li~nAg~~~  115 (269)
T 3gk3_A          102 GKVDVLINNAGITR  115 (269)
T ss_dssp             SCCSEEEECCCCCC
T ss_pred             CCCCEEEECCCcCC
Confidence            47899999998763

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.70  E-value=2.5e-05  Score=75.04  Aligned_cols=72  Identities=22%  Similarity=0.272  Sum_probs=53.0

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHc---Ccc-----ccccc---cccc------CCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA-----LSLAD---LENF------NPED  444 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~---~~~-----~~~~~---~~~~------~~~~  444 (534)
                      +|+++|+|+ ||+|++++..|++.|++|+++ +|+.++++++.+++.   ...     .++.+   +.++      ..+.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            378999999 899999999999999999987 899998888776652   111     12221   1110      1346


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|+|||+++..
T Consensus        81 ~d~li~~Ag~~   91 (245)
T 2ph3_A           81 LDTLVNNAGIT   91 (245)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999865

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.70  E-value=2e-05  Score=76.71  Aligned_cols=70  Identities=13%  Similarity=0.094  Sum_probs=51.6

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH---cCccc--cccccccc------CCCCceEEEEcC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHAL--SLADLENF------NPEDGMILANTT  452 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~~--~~~~~~~~------~~~~~divVn~t  452 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+ +   +.+..  +.+++.++      ..+..|+|||++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nA   80 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND   80 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            57999999 899999999999999999999999888776654 3   22211  22222110      234789999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      ++.
T Consensus        81 g~~   83 (254)
T 1zmt_A           81 IFA   83 (254)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.69  E-value=3.2e-05  Score=75.13  Aligned_cols=77  Identities=19%  Similarity=0.214  Sum_probs=51.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHHc---Ccc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~  441 (534)
                      ...++|++||+|+ ||+|++++..|++.|++|++.. |+.++.+++.+.+.   .+.    .++.+   +.++      .
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            3567899999999 8999999999999999988876 77666666555442   111    12211   1110      2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||++++..
T Consensus        89 ~g~id~lv~~Ag~~~  103 (256)
T 3ezl_A           89 VGEIDVLVNNAGITR  103 (256)
T ss_dssp             TCCEEEEEECCCCCC
T ss_pred             cCCCCEEEECCCCCC
Confidence            457899999998753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.69  E-value=3.3e-05  Score=75.74  Aligned_cols=77  Identities=19%  Similarity=0.247  Sum_probs=54.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHcC---cc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVGG---HA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i-~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~  441 (534)
                      ..+.+|+++|+|+ ||+|++++..|++.|++|++ ..|+.++++++.+.+..   ..    .++.+   +.++      .
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3567899999999 89999999999999998855 67888888887776631   11    12222   1110      2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||++++..
T Consensus       102 ~g~id~li~nAg~~~  116 (267)
T 4iiu_A          102 HGAWYGVVSNAGIAR  116 (267)
T ss_dssp             HCCCSEEEECCCCCC
T ss_pred             hCCccEEEECCCCCC
Confidence            347899999998753

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.69  E-value=7.5e-05  Score=73.94  Aligned_cols=74  Identities=22%  Similarity=0.292  Sum_probs=52.5

Q ss_pred             cCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHHcC-cc--ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYD---RARELAETVGG-HA--LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~~---~a~~la~~~~~-~~--~~~~~---~~~~------~~~  443 (534)
                      +++|+++|+|+   ||+|++++..|++.|++|++++|+.+   .++++.+..+. ..  .++.+   +.++      ..+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            67899999998   59999999999999999999999875   44444443332 11  12221   1110      235


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus        99 ~iD~lv~~Ag~~  110 (285)
T 2p91_A           99 SLDIIVHSIAYA  110 (285)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999875

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.68  E-value=6.2e-05  Score=73.56  Aligned_cols=75  Identities=27%  Similarity=0.354  Sum_probs=53.0

Q ss_pred             ccCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHHcC-cc--ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYD---RARELAETVGG-HA--LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~~---~a~~la~~~~~-~~--~~~~~---~~~~------~~  442 (534)
                      .+++|+++|+|+   ||+|++++..|++.|++|++++|+.+   .++++.+..+. ..  .++.+   +.++      ..
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999998   69999999999999999999999875   44555444332 11  12222   1110      12


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus        85 g~iD~lv~~Ag~~   97 (261)
T 2wyu_A           85 GGLDYLVHAIAFA   97 (261)
T ss_dssp             SSEEEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4789999999875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.68  E-value=3.8e-05  Score=77.98  Aligned_cols=75  Identities=17%  Similarity=0.232  Sum_probs=51.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHH---cCcc----ccccc---cccc-----
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-----YDRARELAETV---GGHA----LSLAD---LENF-----  440 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-----~~~a~~la~~~---~~~~----~~~~~---~~~~-----  440 (534)
                      +++|+++|+|+ ||+|++++..|++.|++|++..|+     .++++++.+.+   +...    .++.+   +.++     
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            45789999999 899999999999999999987665     56666665543   2211    12221   1110     


Q ss_pred             -CCCCceEEEEcCCCCC
Q 009464          441 -NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 -~~~~~divVn~t~~g~  456 (534)
                       ..+..|+|||+++++.
T Consensus        83 ~~~g~iD~lVnnAG~~~   99 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMV   99 (324)
T ss_dssp             HHHSCCSEEEECCCCCB
T ss_pred             HHcCCCCEEEECCCcCC
Confidence             2347899999998763

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.68  E-value=6.8e-05  Score=74.13  Aligned_cols=76  Identities=14%  Similarity=0.221  Sum_probs=54.8

Q ss_pred             cccCCcEEEEEcC-c--hhHHHHHHHHHHCCCeEEEEeCCH--HHHHHHHHHHcCc-c--ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTY--DRARELAETVGGH-A--LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-G--G~graia~~L~~~G~~v~i~~R~~--~~a~~la~~~~~~-~--~~~~~---~~~~------~~  442 (534)
                      ..+++|+++|+|+ |  |+|++++..|++.|++|++++|+.  +.++++.+..+.. .  +++.+   +.++      ..
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            3578899999996 3  599999999999999999999987  6666666554321 1  12221   1110      24


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|+|||++++.
T Consensus       102 g~id~li~nAg~~  114 (280)
T 3nrc_A          102 DGLDAIVHSIAFA  114 (280)
T ss_dssp             SSCCEEEECCCCC
T ss_pred             CCCCEEEECCccC
Confidence            5789999999875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.66  E-value=2.4e-05  Score=76.38  Aligned_cols=77  Identities=16%  Similarity=0.241  Sum_probs=51.2

Q ss_pred             ccccCCcEEEEEcC-chhHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHH--cCcc----cccccc---ccc-----
Q 009464          379 SSALAGKLFVVIGA-GGAGKALAYGAKAKG---ARVVIANRTYDRARELAETV--GGHA----LSLADL---ENF-----  440 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG~graia~~L~~~G---~~v~i~~R~~~~a~~la~~~--~~~~----~~~~~~---~~~-----  440 (534)
                      ...+++|+++|+|+ ||+|++++..|++.|   ++|++++|+.++.+.+.+..  +...    .++.+.   .++     
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence            35678999999999 899999999999999   89999999987655443211  1111    122221   110     


Q ss_pred             -CCC--CceEEEEcCCCC
Q 009464          441 -NPE--DGMILANTTSIG  455 (534)
Q Consensus       441 -~~~--~~divVn~t~~g  455 (534)
                       ..+  ..|+|||++++.
T Consensus        96 ~~~g~~~id~li~~Ag~~  113 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIA  113 (267)
T ss_dssp             HHHGGGCCSEEEECCCCC
T ss_pred             HhcCCCCccEEEECCCcC
Confidence             112  589999999865

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.66  E-value=3.8e-05  Score=84.83  Aligned_cols=78  Identities=22%  Similarity=0.255  Sum_probs=49.9

Q ss_pred             ccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHcC---c-cccccccc---cc-
Q 009464          379 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR---------TYDRARELAETVGG---H-ALSLADLE---NF-  440 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R---------~~~~a~~la~~~~~---~-~~~~~~~~---~~-  440 (534)
                      ..+++||+++|+|+ ||+|+++|..|++.|++|++++|         +.++++++++++..   . ..++.+..   ++ 
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVI   93 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHH
Confidence            35688999999999 79999999999999999999987         77777777776631   1 11222111   10 


Q ss_pred             -----CCCCceEEEEcCCCCC
Q 009464          441 -----NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 -----~~~~~divVn~t~~g~  456 (534)
                           ..+..|+||||+++..
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~  114 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILR  114 (613)
T ss_dssp             C----------CEECCCCCCC
T ss_pred             HHHHHHCCCCcEEEECCCCCC
Confidence                 3457899999998753

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.66  E-value=8.7e-05  Score=72.50  Aligned_cols=77  Identities=27%  Similarity=0.329  Sum_probs=53.0

Q ss_pred             cccCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCCHHH-----HHHHHHHHcCcc----cccccc---ccc----
Q 009464          380 SALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDR-----ARELAETVGGHA----LSLADL---ENF----  440 (534)
Q Consensus       380 ~~l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~~~~-----a~~la~~~~~~~----~~~~~~---~~~----  440 (534)
                      .++++|+++|+|++   |+|++++..|++.|++|+++.|+.++     .+++.+..+.+.    +++.+.   .++    
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            35789999999985   99999999999999999999887433     333433333221    222221   110    


Q ss_pred             --CCCCceEEEEcCCCCC
Q 009464          441 --NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 --~~~~~divVn~t~~g~  456 (534)
                        ..+..|+|||++++..
T Consensus        96 ~~~~g~id~li~nAg~~~  113 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATA  113 (267)
T ss_dssp             HHHTSCCSEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCCcCC
Confidence              2457899999998753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.65  E-value=1.7e-05  Score=75.70  Aligned_cols=65  Identities=18%  Similarity=0.144  Sum_probs=46.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc--CCCCceEEEEcCCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF--NPEDGMILANTTSIG  455 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~--~~~~~divVn~t~~g  455 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.+          .+..+.+++.++  ..+..|+|||+++..
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------LDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            356899999999 89999999999999999999999754          111111111110  225689999999865

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.65  E-value=4.3e-05  Score=74.58  Aligned_cols=74  Identities=16%  Similarity=0.118  Sum_probs=50.0

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHcC---cc----ccccc---cccc------CCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGG---HA----LSLAD---LENF------NPE  443 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~~---~~----~~~~~---~~~~------~~~  443 (534)
                      +.+|+++|+|+ ||+|++++..|++.|++|+++.|+. +..+.+.+.+..   ..    .++.+   +.++      ..+
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            45789999999 8999999999999999999986654 445555544321   11    12222   1110      124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus        85 ~id~lv~~Ag~~   96 (264)
T 3i4f_A           85 KIDFLINNAGPY   96 (264)
T ss_dssp             CCCEEECCCCCC
T ss_pred             CCCEEEECCccc
Confidence            789999999853

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.64  E-value=6.4e-05  Score=77.62  Aligned_cols=98  Identities=21%  Similarity=0.194  Sum_probs=68.8

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccc-----------------------ccc
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-----------------------ADL  437 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~-----------------------~~~  437 (534)
                      .+.+++++|+|+|.+|+.++..+...|++|++++|+.++.+.+.+ ++.+...+                       +++
T Consensus       181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          181 TVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             EECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            356889999999999999999999999999999999998877755 44432221                       123


Q ss_pred             cccCCCCceEEEEcCCCCCCCCCCCCCCCcc---ccCCCCEEEEEecC
Q 009464          438 ENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVYT  482 (534)
Q Consensus       438 ~~~~~~~~divVn~t~~g~~~~~~~~~i~~~---~l~~~~~v~Dv~y~  482 (534)
                      .+ ....+|+||+++.+...+  .+..+..+   .++++.+++|+.-.
T Consensus       260 ~e-~l~~aDIVI~tv~iPg~~--ap~Lvt~emv~~MkpGsVIVDvA~d  304 (381)
T 3p2y_A          260 ED-AITKFDIVITTALVPGRP--APRLVTAAAATGMQPGSVVVDLAGE  304 (381)
T ss_dssp             HH-HHTTCSEEEECCCCTTSC--CCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HH-HHhcCCEEEECCCCCCcc--cceeecHHHHhcCCCCcEEEEEeCC
Confidence            33 346789999987443211  11123333   35678899999753

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.64  E-value=8.9e-05  Score=75.64  Aligned_cols=75  Identities=16%  Similarity=0.226  Sum_probs=58.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHcCcc-----cccc---cccccCCCCceEE
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGHA-----LSLA---DLENFNPEDGMIL  448 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~-G~-~v~i~~R~~~~a~~la~~~~~~~-----~~~~---~~~~~~~~~~div  448 (534)
                      ..+++|+++|+|+ |++|++++..|.+. |+ +|++++|+.++.+++.+.+....     .++.   .+.+ ....+|+|
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~-~~~~~D~V   95 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNY-ALEGVDIC   95 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHH-HTTTCSEE
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHH-HHhcCCEE
Confidence            3467899999998 99999999999999 98 99999999999888877764211     1222   2223 34578999


Q ss_pred             EEcCCCC
Q 009464          449 ANTTSIG  455 (534)
Q Consensus       449 Vn~t~~g  455 (534)
                      |++++..
T Consensus        96 ih~Aa~~  102 (344)
T 2gn4_A           96 IHAAALK  102 (344)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999865

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.64  E-value=0.00011  Score=78.21  Aligned_cols=47  Identities=34%  Similarity=0.380  Sum_probs=42.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      ..+.||+++|+|+|++|+++|..|+..|++|++++|+.+++++.+..
T Consensus       261 ~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~  307 (488)
T 3ond_A          261 VMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATME  307 (488)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT
T ss_pred             CcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHh
Confidence            46789999999999999999999999999999999999887766543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.63  E-value=5.8e-06  Score=79.59  Aligned_cols=74  Identities=14%  Similarity=0.035  Sum_probs=48.5

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc------CC--CCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF------NP--EDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~------~~--~~~divVn~t~  453 (534)
                      ++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.-...+..+..+.+++.++      ..  +..|+|||+++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag   81 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG   81 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCc
Confidence            4689999999 899999999999999999999998765321000000111111111110      12  47899999998


Q ss_pred             CCC
Q 009464          454 IGM  456 (534)
Q Consensus       454 ~g~  456 (534)
                      +..
T Consensus        82 ~~~   84 (236)
T 1ooe_A           82 GWA   84 (236)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            753

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.63  E-value=0.00012  Score=71.33  Aligned_cols=77  Identities=19%  Similarity=0.239  Sum_probs=53.7

Q ss_pred             cccCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHHcC-cc--ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYD---RARELAETVGG-HA--LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~~---~a~~la~~~~~-~~--~~~~~---~~~~------~  441 (534)
                      ..+++|+++|+|+   ||+|++++..|++.|++|++++|+..   .++++.+..+. ..  +++.+   +.++      .
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            5678999999996   59999999999999999999988843   34444444432 11  12221   1110      2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|+|||++++..
T Consensus        90 ~g~id~lv~nAg~~~  104 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAP  104 (271)
T ss_dssp             CSCEEEEEECCCCCC
T ss_pred             cCCCCEEEECCccCc
Confidence            457899999998753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.62  E-value=0.00011  Score=64.67  Aligned_cols=69  Identities=22%  Similarity=0.262  Sum_probs=52.3

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-----cccccccccCCCCceEEEEcCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-----~~~~~~~~~~~~~~divVn~t~  453 (534)
                      .++++|+|+|.+|++++..|.+.|++|++++|++++.+.+.+. +...     .+.+.+.+....++|++|.+++
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-GFDAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            4689999999999999999999999999999999998887653 2221     1111222223457899999887

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.62  E-value=6.3e-05  Score=75.54  Aligned_cols=110  Identities=16%  Similarity=0.198  Sum_probs=74.6

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccccccccCCCCceEEEEcCCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDET  463 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~  463 (534)
                      |+|-+||-|-||.++|..|.+.|++|+++||+.++++.+.+. +... .+..++    ....|+||.+.+-...  ....
T Consensus         4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~-Ga~~a~s~~e~----~~~~dvv~~~l~~~~~--v~~V   76 (300)
T 3obb_A            4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA-GASAARSARDA----VQGADVVISMLPASQH--VEGL   76 (300)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-TCEECSSHHHH----HTTCSEEEECCSCHHH--HHHH
T ss_pred             CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHc-CCEEcCCHHHH----HhcCCceeecCCchHH--HHHH
Confidence            579999999999999999999999999999999999998764 2221 122222    2457999988763210  0000


Q ss_pred             CCC----ccccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEec
Q 009464          464 PIP----KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  501 (534)
Q Consensus       464 ~i~----~~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii~  501 (534)
                      ...    ...+.++.+++|+..... .+ .+.+.++++|+.+++
T Consensus        77 ~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lD  120 (300)
T 3obb_A           77 YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD  120 (300)
T ss_dssp             HHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred             HhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence            001    123567789999997644 33 555566778887664

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.62  E-value=2.2e-05  Score=75.47  Aligned_cols=74  Identities=22%  Similarity=0.284  Sum_probs=52.3

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCC--C
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPE--D  444 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G--~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~--~  444 (534)
                      ++|+++|+|+ ||+|++++..|++.|  ++|++++|+.++.+++.+.-+...    .++.+   +.++      ..+  .
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999 899999999999999  999999999888776643201111    12211   1110      112  6


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|+|||++++..
T Consensus        82 id~li~~Ag~~~   93 (250)
T 1yo6_A           82 LSLLINNAGVLL   93 (250)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CcEEEECCcccC
Confidence            899999998753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.61  E-value=7.4e-06  Score=79.17  Aligned_cols=74  Identities=9%  Similarity=-0.026  Sum_probs=48.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc------CC--CCceEEEEcC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF------NP--EDGMILANTT  452 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~------~~--~~~divVn~t  452 (534)
                      .++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.-...+..+..+.+++.++      ..  +..|+|||++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~A   84 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVA   84 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcc
Confidence            35789999999 899999999999999999999998765321000000111111111110      12  4789999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      ++.
T Consensus        85 g~~   87 (241)
T 1dhr_A           85 GGW   87 (241)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            875

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.60  E-value=0.00016  Score=62.88  Aligned_cols=71  Identities=21%  Similarity=0.349  Sum_probs=52.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc--c---cccccccCCCCceEEEEcCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--S---LADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~--~---~~~~~~~~~~~~divVn~t~~  454 (534)
                      +.+++|+|+|.+|+.++..|.+.|.+|++++|+.++++.+.+.++....  +   .+.+.+.....+|+||.+++.
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence            4689999999999999999999999999999999998888765443211  1   111222134578999999863

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.60  E-value=1.8e-05  Score=78.01  Aligned_cols=75  Identities=24%  Similarity=0.306  Sum_probs=54.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH---cCcc----ccccc---cccc------CCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------NPE  443 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~----~~~~~---~~~~------~~~  443 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+   +...    .++.+   +.++      ..+
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            578999999999 89999999999999999999999887666655443   2211    12221   1110      124


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||+++..
T Consensus       111 ~id~li~~Ag~~  122 (279)
T 3ctm_A          111 TIDVFVANAGVT  122 (279)
T ss_dssp             CCSEEEECGGGS
T ss_pred             CCCEEEECCccc
Confidence            589999999865

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.60  E-value=3e-05  Score=74.35  Aligned_cols=72  Identities=17%  Similarity=0.171  Sum_probs=51.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCc--cccc---ccccccCCCCceEEEEcCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH--ALSL---ADLENFNPEDGMILANTTS  453 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~--~~~~---~~~~~~~~~~~divVn~t~  453 (534)
                      +.+|+++|+|+ |++|++++..|++.|+  +|++++|+.++.+++... ...  ..++   +++.+ ....+|+|||+++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~d~~~~~~-~~~~~d~vi~~ag   93 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK-NVNQEVVDFEKLDDYAS-AFQGHDVGFCCLG   93 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG-GCEEEECCGGGGGGGGG-GGSSCSEEEECCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccC-CceEEecCcCCHHHHHH-HhcCCCEEEECCC
Confidence            45789999998 9999999999999999  999999987654322111 111  1222   23333 3457899999998


Q ss_pred             CC
Q 009464          454 IG  455 (534)
Q Consensus       454 ~g  455 (534)
                      ..
T Consensus        94 ~~   95 (242)
T 2bka_A           94 TT   95 (242)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.59  E-value=1.3e-05  Score=78.73  Aligned_cols=75  Identities=19%  Similarity=0.215  Sum_probs=51.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc---cccc------CCCCceEEE
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILA  449 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~---~~~~------~~~~~divV  449 (534)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++.  .......++.+   +.++      ..+..|+||
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP--DIHTVAGDISKPETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST--TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC--ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            3467899999999 8999999999999999999999986643221  00000112211   1110      234789999


Q ss_pred             EcCCCCC
Q 009464          450 NTTSIGM  456 (534)
Q Consensus       450 n~t~~g~  456 (534)
                      |++++..
T Consensus       102 ~nAg~~~  108 (260)
T 3un1_A          102 NNAGVFL  108 (260)
T ss_dssp             ECCCCCC
T ss_pred             ECCCCCC
Confidence            9998753

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.59  E-value=0.00011  Score=73.60  Aligned_cols=113  Identities=13%  Similarity=0.047  Sum_probs=74.8

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC-CCC-
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP-KVD-  461 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~-~~~-  461 (534)
                      .+++.|+|+|.+|.+++..|++.|.+|++++|+.++++.+.+. +... ...++.+ ....+|+||-++|....- ..- 
T Consensus         7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~-~~~~~~e-~~~~aDvvi~~vp~~~~~~~v~~   83 (303)
T 3g0o_A            7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE-GACG-AAASARE-FAGVVDALVILVVNAAQVRQVLF   83 (303)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCSE-EESSSTT-TTTTCSEEEECCSSHHHHHHHHC
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc-CCcc-ccCCHHH-HHhcCCEEEEECCCHHHHHHHHh
Confidence            3689999999999999999999999999999999999888764 2211 0233444 445789999998753110 000 


Q ss_pred             -CCCCCccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEe
Q 009464          462 -ETPIPKHALGHYALVFDAVYTPKIT--RLLREAEESGATIV  500 (534)
Q Consensus       462 -~~~i~~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii  500 (534)
                       ...+ ...++++.+++|..-.+..+  .+.+..++.|+.++
T Consensus        84 ~~~~l-~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~  124 (303)
T 3g0o_A           84 GEDGV-AHLMKPGSAVMVSSTISSADAQEIAAALTALNLNML  124 (303)
T ss_dssp             --CCC-GGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred             ChhhH-HhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEE
Confidence             0011 13456778999998654433  33344556676554

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.59  E-value=4e-05  Score=67.04  Aligned_cols=72  Identities=18%  Similarity=0.223  Sum_probs=50.7

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-----cccccccccCCCCceEEEEcCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-----~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      +++++++|+|+|++|+.++..|.+.|++|++++|+.++.+.+.+. +...     .+.+.+.+.....+|+||++++.
T Consensus         4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred             CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence            346789999999999999999999999999999998887665432 1111     11122222124568999999874

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.59  E-value=9.2e-05  Score=72.37  Aligned_cols=76  Identities=16%  Similarity=0.178  Sum_probs=52.0

Q ss_pred             ccCCcEEEEEcC-ch--hHHHHHHHHHHCCCeEEEEeCCHHHHHHH---HHHHcC-cc----ccccccc---cc------
Q 009464          381 ALAGKLFVVIGA-GG--AGKALAYGAKAKGARVVIANRTYDRAREL---AETVGG-HA----LSLADLE---NF------  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG--~graia~~L~~~G~~v~i~~R~~~~a~~l---a~~~~~-~~----~~~~~~~---~~------  440 (534)
                      ++++|+++|+|+ |+  +|++++..|++.|++|++++|+.+..+.+   .+.++. ..    .++.+.+   ++      
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            567899999998 55  99999999999999999999986544333   333322 11    1222211   10      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|+|||+++...
T Consensus        84 ~~g~id~li~~Ag~~~   99 (266)
T 3oig_A           84 QVGVIHGIAHCIAFAN   99 (266)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HhCCeeEEEEcccccc
Confidence            2346899999998753

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.59  E-value=4e-05  Score=72.16  Aligned_cols=68  Identities=22%  Similarity=0.263  Sum_probs=50.1

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccccccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      +++|+|| |++|++++..|.+.|++|+++.|+.++.+++..  +...  .++.+.....+..+|+|||+++..
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~   72 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHK--DINILQKDIFDLTLSDLSDQNVVVDAYGIS   72 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCS--SSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccC--CCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence            6999998 999999999999999999999999988766541  1111  222222111345789999999874

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.57  E-value=0.00025  Score=68.78  Aligned_cols=71  Identities=25%  Similarity=0.270  Sum_probs=49.8

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---cccc------CCCCceEE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMIL  448 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~------~~~~~div  448 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+..     ..+...  .++.+   +.++      ..+..|+|
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----QYPFATEVMDVADAAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-----CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-----cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467899999999 8999999999999999999999986521     111111  12211   1110      23578999


Q ss_pred             EEcCCCCC
Q 009464          449 ANTTSIGM  456 (534)
Q Consensus       449 Vn~t~~g~  456 (534)
                      ||+++...
T Consensus        79 v~~Ag~~~   86 (250)
T 2fwm_X           79 VNAAGILR   86 (250)
T ss_dssp             EECCCCCC
T ss_pred             EECCCcCC
Confidence            99998753

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.57  E-value=5.2e-05  Score=79.32  Aligned_cols=97  Identities=22%  Similarity=0.256  Sum_probs=67.6

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccc-------------------------
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA-------------------------  435 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~-------------------------  435 (534)
                      .+.+++++|+|+|++|++++..+...|++|++++|+.++.+.+ +.++.....++                         
T Consensus       169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  247 (401)
T 1x13_A          169 KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME  247 (401)
T ss_dssp             EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence            3568999999999999999999999999999999999988776 45554432110                         


Q ss_pred             cccccCCCCceEEEEcCCC-CCCCCCCCCCCCc---cccCCCCEEEEEecC
Q 009464          436 DLENFNPEDGMILANTTSI-GMQPKVDETPIPK---HALGHYALVFDAVYT  482 (534)
Q Consensus       436 ~~~~~~~~~~divVn~t~~-g~~~~~~~~~i~~---~~l~~~~~v~Dv~y~  482 (534)
                      .+.+ ....+|+||+++++ |..   ....+..   ..++++.+++|+.+.
T Consensus       248 ~l~e-~~~~aDvVI~~~~~pg~~---ap~li~~~~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          248 LFAA-QAKEVDIIVTTALIPGKP---APKLITREMVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHH-HHHHCSEEEECCCCTTSC---CCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHHH-HhCCCCEEEECCccCCCC---CCeeeCHHHHhcCCCCcEEEEEcCC
Confidence            1222 23358999999755 321   1112322   345678899999863

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.57  E-value=0.00018  Score=69.81  Aligned_cols=73  Identities=10%  Similarity=0.024  Sum_probs=49.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccc-------ccccccCCCCceEEEEc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-------ADLENFNPEDGMILANT  451 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~-------~~~~~~~~~~~divVn~  451 (534)
                      ....+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++.  .+..+..+.       +++.+ ..+..|+|||+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~--~~~~d~~d~~~v~~~~~~~~~-~~g~iD~li~~   94 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--SFTIKDSGEEEIKSVIEKINS-KSIKVDTFVCA   94 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSE--EEECSCSSHHHHHHHHHHHHT-TTCCEEEEEEC
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccc--ceEEEeCCHHHHHHHHHHHHH-HcCCCCEEEEC
Confidence            3456899999999 8999999999999999999999987653211  000111111       11222 35678999999


Q ss_pred             CCCC
Q 009464          452 TSIG  455 (534)
Q Consensus       452 t~~g  455 (534)
                      +++.
T Consensus        95 Ag~~   98 (251)
T 3orf_A           95 AGGW   98 (251)
T ss_dssp             CCCC
T ss_pred             CccC
Confidence            9875

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=97.57  E-value=2.4e-06  Score=90.14  Aligned_cols=103  Identities=19%  Similarity=0.213  Sum_probs=68.9

Q ss_pred             HHHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-e
Q 009464          331 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-R  409 (534)
Q Consensus       331 ~A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~  409 (534)
                      ..+.+|+||||+.+  +|++.|     .||...++..           ...+++++|+|+|+||+|..++..|+..|+ +
T Consensus         5 ~~~r~~~vntl~~~--~g~~~g-----~gf~~g~e~~-----------~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~   66 (434)
T 1tt5_B            5 WEGRWNHVKKFLER--SGPFTH-----PDFEPSTESL-----------QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQ   66 (434)
T ss_dssp             CTTTTHHHHHHHHS--CCSSCC-----TTCCCCSSHH-----------HHHHHTCCEEEECSSTHHHHHHHHHHHTTCCC
T ss_pred             hhhhhccceEEEcC--CCcccc-----cccccCHHHH-----------HHHhcCCEEEEECcCHHHHHHHHHHHHcCCCE
Confidence            34578999999976  788877     4554432211           012356899999999999999999999999 9


Q ss_pred             EEEEe----------CCH---------HHHHHHHHHHcC-----ccc----ccccc-cccCCCCceEEEEcC
Q 009464          410 VVIAN----------RTY---------DRARELAETVGG-----HAL----SLADL-ENFNPEDGMILANTT  452 (534)
Q Consensus       410 v~i~~----------R~~---------~~a~~la~~~~~-----~~~----~~~~~-~~~~~~~~divVn~t  452 (534)
                      |+|++          |..         .|++.+++.+..     +..    .+.+. .+ ....+|+||+|+
T Consensus        67 i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~~~~-~~~~~DlVi~~~  137 (434)
T 1tt5_B           67 IHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDT-FYRQFHIIVCGL  137 (434)
T ss_dssp             EEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGBCHH-HHTTCSEEEECC
T ss_pred             EEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchhhHH-HhcCCCEEEECC
Confidence            99994          442         467666665531     111    11111 11 235689999986

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.55  E-value=4.3e-05  Score=76.89  Aligned_cols=114  Identities=18%  Similarity=0.141  Sum_probs=75.9

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCC-CC-C
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQ-PK-V  460 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~-~~-~  460 (534)
                      ..+++.|+|.|.||.+++..|.+.|.+|+++||+.++++++.+. +...  ..++.+ ....+|+||.++|.... .. .
T Consensus         8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~--~~~~~e-~~~~aDvVi~~vp~~~~~~~v~   83 (306)
T 3l6d_A            8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-GAHL--CESVKA-ALSASPATIFVLLDNHATHEVL   83 (306)
T ss_dssp             CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-TCEE--CSSHHH-HHHHSSEEEECCSSHHHHHHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCee--cCCHHH-HHhcCCEEEEEeCCHHHHHHHh
Confidence            45689999999999999999999999999999999999888765 3221  122222 22347999999874320 00 0


Q ss_pred             CCCCCCccccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEecc
Q 009464          461 DETPIPKHALGHYALVFDAVYTPK-IT-RLLREAEESGATIVSG  502 (534)
Q Consensus       461 ~~~~i~~~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii~G  502 (534)
                      ....+  ..+.++.+++|+.-.+. .+ .+.+..++.|+.++++
T Consensus        84 ~~~~l--~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda  125 (306)
T 3l6d_A           84 GMPGV--ARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG  125 (306)
T ss_dssp             TSTTH--HHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred             cccch--hhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence            00011  12456789999987644 33 4445566778776654

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=97.54  E-value=0.00028  Score=70.09  Aligned_cols=210  Identities=20%  Similarity=0.253  Sum_probs=127.4

Q ss_pred             EEecC-CCccccCCHHHHHHHHHHcCCCeEEEeccc----ccHHHHHHHh-cCCCCCEEEeccchH-----HHHhhccc-
Q 009464          259 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHK-----EAAVKCCD-  326 (534)
Q Consensus       259 ~~liG-~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~----~~~~~~~~~~-~~~~~~G~~VT~P~K-----~~v~~~ld-  326 (534)
                      .-++| +|-+++-- ..-.+..+++|++.....++-    +++.+.++.+ .++.+.|+-|-.|+-     +.++..++ 
T Consensus        58 vIlVG~dpaS~~Yv-~~K~k~c~~vGi~s~~~~lp~~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p  136 (303)
T 4b4u_A           58 TILVGDDGASATYV-RMKGNACRRVGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISL  136 (303)
T ss_dssp             EEEESCCHHHHHHH-HHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCG
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCeEEEEecCccCCHHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCc
Confidence            44666 44443321 233567899999987666654    2566666666 578899999999963     33333221 


Q ss_pred             -----ccCHH--HHHhcCeeEEEEeccCCeEEEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHH
Q 009464          327 -----EVDTV--AKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKA  398 (534)
Q Consensus       327 -----~~~~~--A~~iGAvNTi~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~gra  398 (534)
                           -+++.  .+...--...+           -.--.|++.-|+..           +.++.||+++|+|-+ -.||.
T Consensus       137 ~KDVDG~hp~N~G~L~~g~~~~~-----------PcTp~gv~~lL~~~-----------~i~l~Gk~vvViGRS~iVGkP  194 (303)
T 4b4u_A          137 AKDVDGVTCLGFGRMAMGEAAYG-----------SATPAGIMTILKEN-----------NIEIAGKHAVVVGRSAILGKP  194 (303)
T ss_dssp             GGCTTCCCHHHHHHHHTTCCCCC-----------CHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHH
T ss_pred             ccccCccCcchHHHhcCCCCccc-----------CccHHHHHHHHHHH-----------CCCCCCCEEEEEeccccccch
Confidence                 12111  01100000000           01135777766542           367899999999995 77999


Q ss_pred             HHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEE
Q 009464          399 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  478 (534)
Q Consensus       399 ia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~D  478 (534)
                      ++.-|.+.|+.|+++.+.....++.                  ..++||||.++|..   .    -+..+|++++.+|+|
T Consensus       195 la~LL~~~~ATVTi~Hs~T~dl~~~------------------~~~ADIvV~A~G~p---~----~i~~d~vk~GavVID  249 (303)
T 4b4u_A          195 MAMMLLQANATVTICHSRTQNLPEL------------------VKQADIIVGAVGKA---E----LIQKDWIKQGAVVVD  249 (303)
T ss_dssp             HHHHHHHTTCEEEEECTTCSSHHHH------------------HHTCSEEEECSCST---T----CBCGGGSCTTCEEEE
T ss_pred             HHHHHHhcCCEEEEecCCCCCHHHH------------------hhcCCeEEeccCCC---C----ccccccccCCCEEEE
Confidence            9999999999999987533222221                  13479999887642   1    367889999999999


Q ss_pred             EecCCChhHHH-----HHHHH-CCC-eEecc------HHHHHHHHHHHHHH
Q 009464          479 AVYTPKITRLL-----REAEE-SGA-TIVSG------LEMFIGQAYEQYER  516 (534)
Q Consensus       479 v~y~p~~T~ll-----~~A~~-~G~-~ii~G------l~ml~~Qa~~qf~l  516 (534)
                      +-.++.+-.+.     ..+++ .++ .-++|      ..||+..-+.+.+-
T Consensus       250 VGin~~~~~~vGDVdf~~v~~~a~~iTPVPGGVGPmTiamLl~Ntv~aa~r  300 (303)
T 4b4u_A          250 AGFHPRDGGGVGDIQLQGIEEIASAYTPVPGGVGPMTITTLIRQTVEAAEK  300 (303)
T ss_dssp             CCCBCCTTSCBCSBCCTTGGGTCSEECCSSSSHHHHHHHHHHHHHHHHHHH
T ss_pred             eceecCCCCeECCcCHHHHhhhCcEECCCCCCchHHHHHHHHHHHHHHHHH
Confidence            98776532111     11222 332 12333      47888877777654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.54  E-value=5.8e-05  Score=72.40  Aligned_cols=72  Identities=14%  Similarity=-0.001  Sum_probs=50.8

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHcCcccccc---cccccCCCCceEEEEcCCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAK--GARVVIANRTYDRARELAETVGGHALSLA---DLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~--G~~v~i~~R~~~~a~~la~~~~~~~~~~~---~~~~~~~~~~divVn~t~~g  455 (534)
                      ++++++|+|+ |++|++++..|.+.  |++|+++.|+.++.+++.........++.   ++.+ ....+|+|||+++..
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi~~a~~~   80 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP-AFQGIDALVILTSAV   80 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHH-HHTTCSEEEECCCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHH-HHcCCCEEEEecccc
Confidence            4689999998 99999999999999  78999999998876654111100011222   2223 234689999999764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.52  E-value=3.5e-05  Score=75.34  Aligned_cols=71  Identities=14%  Similarity=0.220  Sum_probs=53.8

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH-------------------HHHHHHHHHHcC-----cccc---
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY-------------------DRARELAETVGG-----HALS---  433 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~-------------------~~a~~la~~~~~-----~~~~---  433 (534)
                      +++++|+|+|+||+|..++..|+..|+ +|++++++.                   .|++.+++.+..     ....   
T Consensus        29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            557899999999999999999999999 999999998                   888888877642     1111   


Q ss_pred             -cc--cccccCCCCceEEEEcCC
Q 009464          434 -LA--DLENFNPEDGMILANTTS  453 (534)
Q Consensus       434 -~~--~~~~~~~~~~divVn~t~  453 (534)
                       ++  ++.+ .+..+|+||+|+.
T Consensus       109 ~~~~~~~~~-~~~~~DvVi~~~d  130 (249)
T 1jw9_B          109 LLDDAELAA-LIAEHDLVLDCTD  130 (249)
T ss_dssp             CCCHHHHHH-HHHTSSEEEECCS
T ss_pred             cCCHhHHHH-HHhCCCEEEEeCC
Confidence             11  1112 2346899999985

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.52  E-value=4.7e-05  Score=77.11  Aligned_cols=113  Identities=19%  Similarity=0.181  Sum_probs=75.7

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      ..+++.|+|+|.+|.+++..|++.|++|++++|+.++++++.+. +..  ...++.+ ....+|+||-++|....  ...
T Consensus        30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~--~~~~~~e-~~~~aDvVi~~vp~~~~--~~~  103 (320)
T 4dll_A           30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL-GAT--IHEQARA-AARDADIVVSMLENGAV--VQD  103 (320)
T ss_dssp             CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCE--EESSHHH-HHTTCSEEEECCSSHHH--HHH
T ss_pred             CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-CCE--eeCCHHH-HHhcCCEEEEECCCHHH--HHH
Confidence            45689999999999999999999999999999999999888654 221  1222223 23457999998874211  000


Q ss_pred             CCC--C-ccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEec
Q 009464          463 TPI--P-KHALGHYALVFDAVYTPKIT--RLLREAEESGATIVS  501 (534)
Q Consensus       463 ~~i--~-~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii~  501 (534)
                      ...  . ...+.++.+++|+...+..+  .+.+..++.|..+++
T Consensus       104 v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~  147 (320)
T 4dll_A          104 VLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD  147 (320)
T ss_dssp             HHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence            000  0 12356778999998765433  344555677876654

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.51  E-value=5.9e-05  Score=77.67  Aligned_cols=113  Identities=16%  Similarity=0.174  Sum_probs=74.1

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      .+.+++.|||.|-||.+++..|++.|.+|++++|+.++++++.+. +... .+.+++.+ ....+|+||.++|.+ .  .
T Consensus        20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~-~a~~~DvVi~~vp~~-~--v   94 (358)
T 4e21_A           20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALERE-GIAGARSIEEFCA-KLVKPRVVWLMVPAA-V--V   94 (358)
T ss_dssp             --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCBCCSSHHHHHH-HSCSSCEEEECSCGG-G--H
T ss_pred             hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCEEeCCHHHHHh-cCCCCCEEEEeCCHH-H--H
Confidence            346789999999999999999999999999999999998887653 2211 12223222 223459999998754 1  0


Q ss_pred             CCCCCC--ccccCCCCEEEEEecCCCh-h-HHHHHHHHCCCeEe
Q 009464          461 DETPIP--KHALGHYALVFDAVYTPKI-T-RLLREAEESGATIV  500 (534)
Q Consensus       461 ~~~~i~--~~~l~~~~~v~Dv~y~p~~-T-~ll~~A~~~G~~ii  500 (534)
                      .. -+.  ...++++.+++|..-.+.. + .+.+..+++|+.++
T Consensus        95 ~~-vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v  137 (358)
T 4e21_A           95 DS-MLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYV  137 (358)
T ss_dssp             HH-HHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEE
T ss_pred             HH-HHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEE
Confidence            10 010  1235677899999866432 2 34445566777554

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.51  E-value=2.9e-05  Score=76.21  Aligned_cols=72  Identities=19%  Similarity=0.215  Sum_probs=49.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc---cccc------CCCCceEEEE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILAN  450 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~---~~~~------~~~~~divVn  450 (534)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.    ........++.+   +.++      ..+..|+|||
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE----AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS----CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC----CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            467899999999 8999999999999999999999986540    000000112211   1110      1246899999


Q ss_pred             cCCCCC
Q 009464          451 TTSIGM  456 (534)
Q Consensus       451 ~t~~g~  456 (534)
                      +++...
T Consensus        81 ~Ag~~~   86 (264)
T 2dtx_A           81 NAGIES   86 (264)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            998753

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.50  E-value=5.2e-05  Score=79.32  Aligned_cols=37  Identities=30%  Similarity=0.162  Sum_probs=33.5

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHH-CCCeEEEEeCCHHH
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKA-KGARVVIANRTYDR  419 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~-~G~~v~i~~R~~~~  419 (534)
                      .+|++||+|+ +|+|++++..|++ .|++|++++|+.+.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~   98 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPG   98 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchh
Confidence            4899999999 6999999999999 99999999987653

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.50  E-value=4.6e-05  Score=73.14  Aligned_cols=99  Identities=14%  Similarity=0.172  Sum_probs=60.6

Q ss_pred             ccCCcEEEEEcC-----------------chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc---
Q 009464          381 ALAGKLFVVIGA-----------------GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF---  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-----------------GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~---  440 (534)
                      ++.||++||+|+                 ||+|+++|.+|++.|++|+++.|... ++ .  ..+....++++..++   
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-~--~~g~~~~dv~~~~~~~~~   80 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-T--PPFVKRVDVMTALEMEAA   80 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-C--CTTEEEEECCSHHHHHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-c--CCCCeEEccCcHHHHHHH
Confidence            578999999998                 79999999999999999999887542 10 0  001111222221110   


Q ss_pred             ---CCCCceEEEEcCCCCCCCCCCCCCCCccccCC---C--CEEEEEecCCChh
Q 009464          441 ---NPEDGMILANTTSIGMQPKVDETPIPKHALGH---Y--ALVFDAVYTPKIT  486 (534)
Q Consensus       441 ---~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~---~--~~v~Dv~y~p~~T  486 (534)
                         ..+..|++|||+++....   ........+++   .  .+.+.+.-+|.--
T Consensus        81 v~~~~~~~Dili~~Aav~d~~---p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL  131 (226)
T 1u7z_A           81 VNASVQQQNIFIGCAAVADYR---AATVAPEKIKKQATQGDELTIKMVKNPDIV  131 (226)
T ss_dssp             HHHHGGGCSEEEECCBCCSEE---ESSCCSSCC-------CEEEEEEEECCCHH
T ss_pred             HHHhcCCCCEEEECCcccCCC---CccCChHHhccccccCCceEEEEeecHHHH
Confidence               245689999999876321   11123344544   2  4677888777633

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.47  E-value=9.9e-05  Score=76.60  Aligned_cols=64  Identities=20%  Similarity=0.103  Sum_probs=45.2

Q ss_pred             EEEEeccHHHHHHHHHhhhc--cCCCcCCCcccccCCcEEEEEcC-chhHHHHHHHHHH-CCCeEEEEeCCHH
Q 009464          350 LFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKA-KGARVVIANRTYD  418 (534)
Q Consensus       350 l~G~NTD~~G~~~~l~~~l~--~~~~~~~~~~~~l~~k~vlVlGa-GG~graia~~L~~-~G~~v~i~~R~~~  418 (534)
                      ++-.|+--.|-.+..++.+.  +..     ......+|++||+|+ +|+|++++..|++ .|++|++++|+.+
T Consensus        16 ~~~~~~hp~gc~~~v~~qi~~~~~~-----~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~   83 (405)
T 3zu3_A           16 FICVTAHPTGCEANVKKQIDYVTTE-----GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERP   83 (405)
T ss_dssp             TEECCCCHHHHHHHHHHHHHHHHHH-----CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             eeecCCCCHHHHHHHHHHHHHHHhc-----CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCch
Confidence            45556666676666544321  000     012245899999999 7999999999999 9999999988654

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.47  E-value=0.0023  Score=65.48  Aligned_cols=128  Identities=23%  Similarity=0.262  Sum_probs=86.4

Q ss_pred             HHHHHHHHHhhhccCCCcCCCccc-ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccc
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSS-ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA  435 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~-~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~  435 (534)
                      +.|.+..++..++..       +. ++.||++.|.|.|.+|+.++..|.+.|++|++++++.++ ++.++.++.+..+.+
T Consensus       154 g~Gv~~~~~~~~~~~-------G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~ga~~v~~~  225 (355)
T 1c1d_A          154 AVGVFEAMKATVAHR-------GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVALGHTAVALE  225 (355)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCEECCGG
T ss_pred             HHHHHHHHHHHHHhc-------CCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhcCCEEeChH
Confidence            567777776655431       24 689999999999999999999999999999999999877 666777765444333


Q ss_pred             cccccCCCCceEEEEcCCCCCCCCCCCCCCCcc---ccCCCCEEEEEecCCChh-HHHHHHHHCCCeEeccHH
Q 009464          436 DLENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVYTPKIT-RLLREAEESGATIVSGLE  504 (534)
Q Consensus       436 ~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~---~l~~~~~v~Dv~y~p~~T-~ll~~A~~~G~~ii~Gl~  504 (534)
                      ++-.   ...|+++.|+--+        .+..+   .++ ..++++..-.|... ...+..+++|+.++++.-
T Consensus       226 ell~---~~~DIliP~A~~~--------~I~~~~~~~lk-~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd~~  286 (355)
T 1c1d_A          226 DVLS---TPCDVFAPCAMGG--------VITTEVARTLD-CSVVAGAANNVIADEAASDILHARGILYAPDFV  286 (355)
T ss_dssp             GGGG---CCCSEEEECSCSC--------CBCHHHHHHCC-CSEECCSCTTCBCSHHHHHHHHHTTCEECCHHH
T ss_pred             Hhhc---CccceecHhHHHh--------hcCHHHHhhCC-CCEEEECCCCCCCCHHHHHHHHhCCEEEECCeE
Confidence            3211   2579999764211        12222   233 46777777666533 445666778876665543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.44  E-value=0.00014  Score=75.69  Aligned_cols=97  Identities=20%  Similarity=0.236  Sum_probs=67.6

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccc--------------------------
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL--------------------------  434 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~--------------------------  434 (534)
                      .+.+.+|+|+|+|.+|+.++..+...|++|++++|+.++.+.+.+ ++......                          
T Consensus       187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~  265 (405)
T 4dio_A          187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ  265 (405)
T ss_dssp             EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHHHHHH
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhhhhhh
Confidence            356789999999999999999999999999999999988777654 55432211                          


Q ss_pred             -ccccccCCCCceEEEEcCCCCCCCCCCCCCCCcc---ccCCCCEEEEEec
Q 009464          435 -ADLENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVY  481 (534)
Q Consensus       435 -~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~---~l~~~~~v~Dv~y  481 (534)
                       ..+.+ ....+|+||+++.+...+  .+..+..+   .++++.+++|+.-
T Consensus       266 ~~~l~e-~l~~aDVVI~tvlipg~~--ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          266 AALVAE-HIAKQDIVITTALIPGRP--APRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHHH-HHHTCSEEEECCCCSSSC--CCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             HhHHHH-HhcCCCEEEECCcCCCCC--CCEEecHHHHhcCCCCCEEEEEeC
Confidence             11222 235689999987543221  11123333   3567899999984

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.44  E-value=2.8e-05  Score=75.52  Aligned_cols=68  Identities=15%  Similarity=0.120  Sum_probs=46.8

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc--CC-CCceEEEEcCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF--NP-EDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~--~~-~~~divVn~t~~g  455 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+.   .+..+..+.+++.++  .. +..|+|||++++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            57999999 899999999999999999999998764321   011111111111110  23 5689999999865

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.43  E-value=3.1e-05  Score=77.65  Aligned_cols=111  Identities=20%  Similarity=0.216  Sum_probs=67.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  463 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~  463 (534)
                      .++|-+||-|-||.++|..|.+.|++|+++||+.++++++.+. +..  ..++..+ .....|+||-+.+-....  .. 
T Consensus         5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~--~~~s~~e-~~~~~dvvi~~l~~~~~~--~~-   77 (297)
T 4gbj_A            5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKL-GAT--VVENAID-AITPGGIVFSVLADDAAV--EE-   77 (297)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTT-TCE--ECSSGGG-GCCTTCEEEECCSSHHHH--HH-
T ss_pred             CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc-CCe--EeCCHHH-HHhcCCceeeeccchhhH--HH-
Confidence            3679999999999999999999999999999999998777543 221  1223333 345689999877632110  00 


Q ss_pred             CCC---ccccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEec
Q 009464          464 PIP---KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  501 (534)
Q Consensus       464 ~i~---~~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii~  501 (534)
                      .+.   ...+.++.+++|...... .+ .+.+.++++|+.+++
T Consensus        78 v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ld  120 (297)
T 4gbj_A           78 LFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVG  120 (297)
T ss_dssp             HSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceec
Confidence            011   123467789999987644 33 455566778876654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.42  E-value=0.00013  Score=69.01  Aligned_cols=69  Identities=20%  Similarity=0.223  Sum_probs=50.2

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccccccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      +++|+|+ |++|++++..|.+.|++|+++.|+.++++++... +...  .++.+........+|+|||+++..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGA-TVATLVKEPLVLTEADLDSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCT-TSEEEECCGGGCCHHHHTTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCC-CceEEecccccccHhhcccCCEEEECCccC
Confidence            5999999 9999999999999999999999999887655321 1111  222222111345789999999875

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.41  E-value=0.00024  Score=74.55  Aligned_cols=73  Identities=15%  Similarity=0.096  Sum_probs=51.3

Q ss_pred             cCCcEEEEEcC-chhHHH--HHHHHHHCCCeEEEEeCCH---------------HHHHHHHHHHcCcc----ccccc---
Q 009464          382 LAGKLFVVIGA-GGAGKA--LAYGAKAKGARVVIANRTY---------------DRARELAETVGGHA----LSLAD---  436 (534)
Q Consensus       382 l~~k~vlVlGa-GG~gra--ia~~L~~~G~~v~i~~R~~---------------~~a~~la~~~~~~~----~~~~~---  436 (534)
                      ..+|+++|+|+ +|+|++  ++.+|++.|++|++++|+.               +.++++++..+...    +++.+   
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            57899999999 799999  8888888899999999864               33334444444321    12211   


Q ss_pred             -------ccccCCCCceEEEEcCCCC
Q 009464          437 -------LENFNPEDGMILANTTSIG  455 (534)
Q Consensus       437 -------~~~~~~~~~divVn~t~~g  455 (534)
                             +.+ ..+..|+|||+++.+
T Consensus       138 v~~~v~~i~~-~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          138 KDKVIKYIKD-EFGKIDLFVYSLAAP  162 (418)
T ss_dssp             HHHHHHHHHH-TTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHH-HcCCCCEEEECCccc
Confidence                   112 457899999999875

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=97.41  E-value=8.2e-05  Score=75.44  Aligned_cols=107  Identities=15%  Similarity=0.191  Sum_probs=68.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|+.++|+.+..+.+    . ......++.+ .+..+|+|+.++|....  
T Consensus       136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~----~-~~~~~~~l~e-ll~~aDvV~l~lPlt~~--  207 (324)
T 3hg7_A          136 QGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF----D-QVYQLPALNK-MLAQADVIVSVLPATRE--  207 (324)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC----S-EEECGGGHHH-HHHTCSEEEECCCCCSS--
T ss_pred             cccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh----h-cccccCCHHH-HHhhCCEEEEeCCCCHH--
Confidence            46889999999999999999999999999999999986432111    0 1112233333 33468999999886522  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHC
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEES  495 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~  495 (534)
                      + ...+..   ..++++.+++|+.-.+. .+.-+..|.+.
T Consensus       208 T-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~  246 (324)
T 3hg7_A          208 T-HHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRT  246 (324)
T ss_dssp             S-TTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHT
T ss_pred             H-HHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHc
Confidence            1 111222   23566778888875533 44444444443

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=97.40  E-value=0.00036  Score=71.11  Aligned_cols=106  Identities=15%  Similarity=0.136  Sum_probs=71.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|+.++|+.++.  .+...+....+++   + ....+|+|+.++|....  
T Consensus       161 ~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~~~l~---e-ll~~aDvV~l~~P~t~~--  232 (335)
T 2g76_A          161 TELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE--VSASFGVQQLPLE---E-IWPLCDFITVHTPLLPS--  232 (335)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH--HHHHTTCEECCHH---H-HGGGCSEEEECCCCCTT--
T ss_pred             cCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh--hhhhcCceeCCHH---H-HHhcCCEEEEecCCCHH--
Confidence            46889999999999999999999999999999999987652  3344443322332   3 23468999999987531  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hh-HHHHHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-IT-RLLREAEE  494 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~  494 (534)
                      + ...+..   ..++++.+++|+.-.+. .+ .+.+..++
T Consensus       233 t-~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~  271 (335)
T 2g76_A          233 T-TGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQS  271 (335)
T ss_dssp             T-TTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred             H-HHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHh
Confidence            1 112332   24567788888887644 33 34443343

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.39  E-value=0.00028  Score=74.98  Aligned_cols=76  Identities=32%  Similarity=0.404  Sum_probs=54.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH--HHHHHHHHHHcCcc--ccccccc---cc------CCC-Cc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY--DRARELAETVGGHA--LSLADLE---NF------NPE-DG  445 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~--~~a~~la~~~~~~~--~~~~~~~---~~------~~~-~~  445 (534)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.  +..+++.+..+...  +++.+.+   ++      ..+ ..
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            467899999999 8999999999999999999999963  44555556554332  2222211   10      223 38


Q ss_pred             eEEEEcCCCCC
Q 009464          446 MILANTTSIGM  456 (534)
Q Consensus       446 divVn~t~~g~  456 (534)
                      |+|||++++..
T Consensus       290 d~lV~nAGv~~  300 (454)
T 3u0b_A          290 DILVNNAGITR  300 (454)
T ss_dssp             SEEEECCCCCC
T ss_pred             eEEEECCcccC
Confidence            99999998763

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.39  E-value=0.00022  Score=71.75  Aligned_cols=106  Identities=20%  Similarity=0.241  Sum_probs=72.5

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++ + .+...+....+++   + ....+|+|+.++|....  
T Consensus       138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~-~~~~~g~~~~~l~---e-ll~~aDvV~l~~p~~~~--  209 (307)
T 1wwk_A          138 IELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-E-RAKEVNGKFVDLE---T-LLKESDVVTIHVPLVES--  209 (307)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-H-HHHHTTCEECCHH---H-HHHHCSEEEECCCCSTT--
T ss_pred             cccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-h-hHhhcCccccCHH---H-HHhhCCEEEEecCCChH--
Confidence            4678999999999999999999999999999999998876 2 3444443332332   2 23357999999986532  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hh-HHHHHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-IT-RLLREAEE  494 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~  494 (534)
                      + ...+..   ..++++.+++|+.-.+. .+ .+.+..++
T Consensus       210 t-~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~  248 (307)
T 1wwk_A          210 T-YHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKE  248 (307)
T ss_dssp             T-TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred             H-hhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHh
Confidence            1 112332   24678889999987643 33 44444444

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.39  E-value=0.0001  Score=73.19  Aligned_cols=110  Identities=23%  Similarity=0.189  Sum_probs=71.8

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  464 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~  464 (534)
                      +++.|+|+|.+|.+++..|++.|++|++++|+.++++.+.+. +..  ...++.+ ....+|+||.++|....  ....-
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~--~~~~~~~-~~~~aDvvi~~vp~~~~--~~~v~   75 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-GAE--RAATPCE-VVESCPVTFAMLADPAA--AEEVC   75 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TCE--ECSSHHH-HHHHCSEEEECCSSHHH--HHHHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCe--ecCCHHH-HHhcCCEEEEEcCCHHH--HHHHH
Confidence            579999999999999999999999999999999998888754 221  1122222 22347999998873210  00000


Q ss_pred             C--C--ccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEe
Q 009464          465 I--P--KHALGHYALVFDAVYTPKIT--RLLREAEESGATIV  500 (534)
Q Consensus       465 i--~--~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii  500 (534)
                      +  .  ...++++.+++|....+..+  .+.+..++.|..++
T Consensus        76 ~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~  117 (287)
T 3pef_A           76 FGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFL  117 (287)
T ss_dssp             HSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             cCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEE
Confidence            0  0  12356778999997654433  34445566776554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.39  E-value=0.00013  Score=68.06  Aligned_cols=69  Identities=28%  Similarity=0.365  Sum_probs=51.6

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---ccccC--CCCceEEEEcCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFN--PEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~~--~~~~divVn~t~~g  455 (534)
                      |+++|+|+ ||+|++++..|++.  +|++++|+.++.+++.+.+....  .++.+   +.++.  .+..|+|||+++..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            57999999 89999999999988  99999999999988887764321  12222   22210  23789999999865

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.37  E-value=0.00011  Score=71.36  Aligned_cols=96  Identities=18%  Similarity=0.174  Sum_probs=60.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHH--------------HHHHHHHHcCcccccccccccCCCCc
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR--------------ARELAETVGGHALSLADLENFNPEDG  445 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~--------------a~~la~~~~~~~~~~~~~~~~~~~~~  445 (534)
                      ..+.++++.|+|+|.||.+++..|++.|.+|++++|+.++              ++++++.++..  ...+..+ ....+
T Consensus        15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~e-~~~~a   91 (245)
T 3dtt_A           15 LYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHV--HLAAFAD-VAAGA   91 (245)
T ss_dssp             ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTC--EEEEHHH-HHHHC
T ss_pred             cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCce--eccCHHH-HHhcC
Confidence            4567899999999999999999999999999999999987              44444333211  1222222 23357


Q ss_pred             eEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEe
Q 009464          446 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAV  480 (534)
Q Consensus       446 divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~  480 (534)
                      |+||.+++....... ...+....+ ++.+++|+.
T Consensus        92 DvVilavp~~~~~~~-~~~i~~~~l-~g~ivi~~s  124 (245)
T 3dtt_A           92 ELVVNATEGASSIAA-LTAAGAENL-AGKILVDIA  124 (245)
T ss_dssp             SEEEECSCGGGHHHH-HHHHCHHHH-TTSEEEECC
T ss_pred             CEEEEccCcHHHHHH-HHHhhhhhc-CCCEEEECC
Confidence            999998875421100 000101123 567888887

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.36  E-value=0.00015  Score=68.32  Aligned_cols=68  Identities=22%  Similarity=0.250  Sum_probs=51.5

Q ss_pred             EEEEEc-CchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc-----CcccccccccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlG-aGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      +++|+| +|.+|++++..|.+.|.+|++++|+.++++++.+.++     ... ..+++.+ ....+|+||.+++..
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~D~Vi~~~~~~   75 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI-TGMKNED-AAEACDIAVLTIPWE   75 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCE-EEEEHHH-HHHHCSEEEECSCHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCC-ChhhHHH-HHhcCCEEEEeCChh
Confidence            589999 8999999999999999999999999999888876543     111 1222322 234579999998743

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=97.36  E-value=0.00017  Score=72.91  Aligned_cols=108  Identities=19%  Similarity=0.245  Sum_probs=73.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|++++..|...|++|++++|+.++..  +...+....+++   + ....+|+|+.++|....  
T Consensus       138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~~~g~~~~~l~---e-ll~~aDvVvl~~P~~~~--  209 (313)
T 2ekl_A          138 LELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK--AEKINAKAVSLE---E-LLKNSDVISLHVTVSKD--  209 (313)
T ss_dssp             CCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--HHHTTCEECCHH---H-HHHHCSEEEECCCCCTT--
T ss_pred             CCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH--HHhcCceecCHH---H-HHhhCCEEEEeccCChH--
Confidence            467899999999999999999999999999999999887642  344443322232   2 23357999999986531  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCC
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESG  496 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G  496 (534)
                      + ...+..   ..++++.+++|+.-.+. .+.-+..+.+.|
T Consensus       210 t-~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g  249 (313)
T 2ekl_A          210 A-KPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKG  249 (313)
T ss_dssp             S-CCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTT
T ss_pred             H-HHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence            1 112332   23577788999887543 444445555544

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.36  E-value=7.2e-05  Score=70.73  Aligned_cols=68  Identities=13%  Similarity=0.196  Sum_probs=49.6

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccccc-cccccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHALS-LADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~~~-~~~~~~~~~~~~divVn~t~~g  455 (534)
                      +++|+|| |++|++++..|.+.|++|+++.|+.++.+++ ..+.   .+..+ .+++.+ ...++|+|||+++..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~D~~d~~~~~~~-~~~~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NNVKAVHFDVDWTPEEMAK-QLHGMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TTEEEEECCTTSCHHHHHT-TTTTCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CCceEEEecccCCHHHHHH-HHcCCCEEEECCcCC
Confidence            6899998 9999999999999999999999998765433 1110   11122 223344 466799999999864

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=97.35  E-value=0.0001  Score=75.63  Aligned_cols=110  Identities=20%  Similarity=0.218  Sum_probs=73.0

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|+.++|+....+. +...+....  +++.+ .+..+|+|+.++|....  
T Consensus       160 ~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~~~g~~~~--~~l~e-ll~~aDvV~l~~Plt~~--  233 (351)
T 3jtm_A          160 YDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL-EKETGAKFV--EDLNE-MLPKCDVIVINMPLTEK--  233 (351)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH-HHHHCCEEC--SCHHH-HGGGCSEEEECSCCCTT--
T ss_pred             ccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH-HHhCCCeEc--CCHHH-HHhcCCEEEECCCCCHH--
Confidence            4688999999999999999999999999999999998644333 233443322  23333 34468999999986522  


Q ss_pred             CCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHCC
Q 009464          460 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESG  496 (534)
Q Consensus       460 ~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G  496 (534)
                      + ...+...   .++++.+++|+.-.+. .+.-+..|.+.|
T Consensus       234 t-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g  273 (351)
T 3jtm_A          234 T-RGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESG  273 (351)
T ss_dssp             T-TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred             H-HHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhC
Confidence            1 1223332   3567788888886543 444444444433

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=97.33  E-value=0.00047  Score=70.70  Aligned_cols=95  Identities=19%  Similarity=0.195  Sum_probs=64.0

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+...  +.+...+....  +++.+ .+.++|+|+.++|....  
T Consensus       156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~--~~l~e-ll~~aDiV~l~~Plt~~--  228 (352)
T 3gg9_A          156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK--ERARADGFAVA--ESKDA-LFEQSDVLSVHLRLNDE--  228 (352)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH--HHHHHTTCEEC--SSHHH-HHHHCSEEEECCCCSTT--
T ss_pred             ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH--HHHHhcCceEe--CCHHH-HHhhCCEEEEeccCcHH--
Confidence            5688999999999999999999999999999999998643  22333333322  12222 23457999999886521  


Q ss_pred             CCCCCCCcc---ccCCCCEEEEEecC
Q 009464          460 VDETPIPKH---ALGHYALVFDAVYT  482 (534)
Q Consensus       460 ~~~~~i~~~---~l~~~~~v~Dv~y~  482 (534)
                      + ...+...   .++++.+++|+.-.
T Consensus       229 t-~~li~~~~l~~mk~gailIN~aRg  253 (352)
T 3gg9_A          229 T-RSIITVADLTRMKPTALFVNTSRA  253 (352)
T ss_dssp             T-TTCBCHHHHTTSCTTCEEEECSCG
T ss_pred             H-HHhhCHHHHhhCCCCcEEEECCCc
Confidence            1 1123322   35667788887744

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=97.32  E-value=0.00038  Score=70.91  Aligned_cols=95  Identities=19%  Similarity=0.234  Sum_probs=65.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.++++.|+|.|.+|++++..|+..|++|++++|+.++  +.+..++....   ++.+ .+..+|+|+.++|..... 
T Consensus       146 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~---~l~~-~l~~aDvVil~vp~~~~t-  218 (334)
T 2dbq_A          146 YDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE--EVERELNAEFK---PLED-LLRESDFVVLAVPLTRET-  218 (334)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHHHCCEEC---CHHH-HHHHCSEEEECCCCCTTT-
T ss_pred             cCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch--hhHhhcCcccC---CHHH-HHhhCCEEEECCCCChHH-
Confidence            4678999999999999999999999999999999999876  33344443322   2322 234579999998865311 


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCC
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTP  483 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p  483 (534)
                        ...+..   ..++++.+++++.-.+
T Consensus       219 --~~~i~~~~~~~mk~~ailIn~srg~  243 (334)
T 2dbq_A          219 --YHLINEERLKLMKKTAILINIARGK  243 (334)
T ss_dssp             --TTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred             --HHhhCHHHHhcCCCCcEEEECCCCc
Confidence              111221   2356677787777543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.32  E-value=0.00012  Score=65.63  Aligned_cols=120  Identities=18%  Similarity=0.220  Sum_probs=69.7

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc--c---cccccccCCCCceEEEEcCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--S---LADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~--~---~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ...+++++|+|+|.+|+.++..|.+.|++|++++|+.++++.+....+....  +   .+.+.+.....+|+||.+++..
T Consensus        16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~   95 (155)
T 2g1u_A           16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD   95 (155)
T ss_dssp             -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence            3457899999999999999999999999999999999887665422222111  1   1112221245689999998732


Q ss_pred             CCCCCCCCCCC-ccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHH
Q 009464          456 MQPKVDETPIP-KHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       456 ~~~~~~~~~i~-~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                      ..   ...-.. ...+.+...++-...++...   +..++.|..+++-....
T Consensus        96 ~~---~~~~~~~~~~~~~~~~iv~~~~~~~~~---~~l~~~G~~vi~p~~~~  141 (155)
T 2g1u_A           96 ST---NFFISMNARYMFNVENVIARVYDPEKI---KIFEENGIKTICPAVLM  141 (155)
T ss_dssp             HH---HHHHHHHHHHTSCCSEEEEECSSGGGH---HHHHTTTCEEECHHHHH
T ss_pred             HH---HHHHHHHHHHHCCCCeEEEEECCHHHH---HHHHHCCCcEEcHHHHH
Confidence            10   000000 01122334455555555544   33455787744433333

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.31  E-value=4.1e-05  Score=72.64  Aligned_cols=70  Identities=21%  Similarity=0.212  Sum_probs=48.7

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccc---ccccccCCCCceEEEEcCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL---ADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~---~~~~~~~~~~~divVn~t~~g  455 (534)
                      ++++|+|| |++|++++..|.+.|++|++++|+.++.+.+...+.....++   +++.+ ...++|+|||+++..
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~vi~~a~~~   78 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCE-VCKGADAVISAFNPG   78 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHH-HHTTCSEEEECCCC-
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHH-HhcCCCEEEEeCcCC
Confidence            68999998 999999999999999999999999876543321111001122   22223 345689999998754

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.31  E-value=5.3e-05  Score=70.38  Aligned_cols=70  Identities=17%  Similarity=0.134  Sum_probs=48.5

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccc---cccccCCCCceEEEEcCCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~~~~~~~~~~divVn~t~~g  455 (534)
                      +++++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+.. -+...  .++.   ++.+ ....+|+|||+++..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~-~~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDK-TVAGQDAVIVLLGTR   78 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHH-HHTTCSEEEECCCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccC-CceEEEEecCCCHHHHHH-HHcCCCEEEECccCC
Confidence            378999999 999999999999999999999999876432210 00111  1222   2222 244689999999753

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=97.31  E-value=0.00019  Score=73.82  Aligned_cols=107  Identities=19%  Similarity=0.130  Sum_probs=69.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+...  +.+...+....+++++    +..+|+|+.++|....  
T Consensus       172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~~~l~el----l~~aDvV~l~~Plt~~--  243 (365)
T 4hy3_A          172 RLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR--SMLEENGVEPASLEDV----LTKSDFIFVVAAVTSE--  243 (365)
T ss_dssp             CCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH--HHHHHTTCEECCHHHH----HHSCSEEEECSCSSCC--
T ss_pred             cccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH--HHHhhcCeeeCCHHHH----HhcCCEEEEcCcCCHH--
Confidence            5688999999999999999999999999999999998532  2223333333333332    3468999999886522  


Q ss_pred             CCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHC
Q 009464          460 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEES  495 (534)
Q Consensus       460 ~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~  495 (534)
                      + ...+...   .++++.+++|+.-.+. .+.-+..|.+.
T Consensus       244 T-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~  282 (365)
T 4hy3_A          244 N-KRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSS  282 (365)
T ss_dssp             ----CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHT
T ss_pred             H-HhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHc
Confidence            1 1123332   3567788888874432 33333444333

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.31  E-value=0.00013  Score=73.66  Aligned_cols=73  Identities=22%  Similarity=0.271  Sum_probs=50.1

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH----cCcc----ccccc---cccc-CCCCceEEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF-NPEDGMILA  449 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~----~~~~----~~~~~---~~~~-~~~~~divV  449 (534)
                      .+++++|+|+ |++|++++..|.+.|++|++++|+.++.++..+.+    +...    .++.+   +.++ ....+|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            3579999998 99999999999999999999999766544443332    2111    12222   2220 112689999


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      |+++..
T Consensus        84 h~A~~~   89 (341)
T 3enk_A           84 HFAALK   89 (341)
T ss_dssp             ECCCCC
T ss_pred             ECcccc
Confidence            999764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.28  E-value=0.00048  Score=63.36  Aligned_cols=72  Identities=11%  Similarity=0.116  Sum_probs=53.9

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHcCccc--cc---cccccc-CCCCceEEEEcCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHAL--SL---ADLENF-NPEDGMILANTTS  453 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~-G~~v~i~~R~~~~a~~la~~~~~~~~--~~---~~~~~~-~~~~~divVn~t~  453 (534)
                      +..+++++|+|+|.+|+.++..|.+. |++|++++|+.++.+.+.+ .+....  +.   +.+.+. ...++|+||.+++
T Consensus        36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            45577899999999999999999999 9999999999999887654 333221  11   122332 2457899999886

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=97.27  E-value=2.7e-05  Score=79.12  Aligned_cols=107  Identities=19%  Similarity=0.242  Sum_probs=68.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+.+..+.+.     ......++.+ .+..+|+|+.++|....  
T Consensus       133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----~~~~~~~l~e-ll~~aDvV~l~lPlt~~--  204 (324)
T 3evt_A          133 STLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFH-----ETVAFTATAD-ALATANFIVNALPLTPT--  204 (324)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCS-----EEEEGGGCHH-HHHHCSEEEECCCCCGG--
T ss_pred             ccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHh-----hccccCCHHH-HHhhCCEEEEcCCCchH--
Confidence            467899999999999999999999999999999999865432211     1112233333 23457999999886421  


Q ss_pred             CCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHC
Q 009464          460 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEES  495 (534)
Q Consensus       460 ~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~  495 (534)
                      + ...+...   .++++.+++|+.-.+. .+.-+..|.+.
T Consensus       205 t-~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~  243 (324)
T 3evt_A          205 T-HHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDH  243 (324)
T ss_dssp             G-TTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHT
T ss_pred             H-HHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHh
Confidence            1 1123322   3567778888875533 34444444443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.26  E-value=3.8e-05  Score=73.57  Aligned_cols=71  Identities=24%  Similarity=0.378  Sum_probs=46.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc-----CCCCceEEEEcCCCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF-----NPEDGMILANTTSIGM  456 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~-----~~~~~divVn~t~~g~  456 (534)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.+ .+++ ..+..+..+.+++.++     .....|++||+++...
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~   78 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDL-IYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGL   78 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SSSS-EEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-ccce-EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccC
Confidence            579999999 89999999999999999999999865 2111 0000111111111110     1236899999998753

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.25  E-value=0.00016  Score=72.11  Aligned_cols=103  Identities=14%  Similarity=0.084  Sum_probs=50.5

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCC--CceEEEEcCCCCCCCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPE--DGMILANTTSIGMQPKV  460 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~--~~divVn~t~~g~~~~~  460 (534)
                      +++++|+|+ |++|++++..|.+.|++|++++|+.++. .   .+..+..+.+++.+ ...  .+|+|||+++.....  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~---~~~~Dl~d~~~~~~-~~~~~~~d~vih~A~~~~~~--   74 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-K---FEQVNLLDSNAVHH-IIHDFQPHVIVHCAAERRPD--   74 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------CHH-HHHHHCCSEEEECC--------
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-C---eEEecCCCHHHHHH-HHHhhCCCEEEECCcccChh--
Confidence            578999999 9999999999999999999999876541 1   11111111122222 111  479999998754211  


Q ss_pred             CCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEec
Q 009464          461 DETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS  501 (534)
Q Consensus       461 ~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~  501 (534)
                          .   ........++++... ...+++.+++.|.+++.
T Consensus        75 ----~---~~~~~~~~~~~n~~~-~~~l~~a~~~~~~~~v~  107 (315)
T 2ydy_A           75 ----V---VENQPDAASQLNVDA-SGNLAKEAAAVGAFLIY  107 (315)
T ss_dssp             --------------------CHH-HHHHHHHHHHHTCEEEE
T ss_pred             ----h---hhcCHHHHHHHHHHH-HHHHHHHHHHcCCeEEE
Confidence                0   011123455666532 34566777776766653

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.25  E-value=0.00034  Score=69.40  Aligned_cols=42  Identities=19%  Similarity=0.252  Sum_probs=38.8

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      +++.|+|+|.||.++|..|++.|++|++++|+.++++.+.+.
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            689999999999999999999999999999999988877655

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.24  E-value=0.0001  Score=73.17  Aligned_cols=112  Identities=14%  Similarity=0.095  Sum_probs=72.7

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCC-CCCC--
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQ-PKVD--  461 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~-~~~~--  461 (534)
                      +++.|+|+|.+|.+++..|++.|++|++++|+.++++.+.+. +...  ..+..+ ....+|+||.++|.... ...-  
T Consensus         2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~--~~~~~~-~~~~advvi~~v~~~~~~~~v~~~   77 (287)
T 3pdu_A            2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-GARQ--ASSPAE-VCAACDITIAMLADPAAAREVCFG   77 (287)
T ss_dssp             CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-TCEE--CSCHHH-HHHHCSEEEECCSSHHHHHHHHHS
T ss_pred             CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCee--cCCHHH-HHHcCCEEEEEcCCHHHHHHHHcC
Confidence            368999999999999999999999999999999999888764 2221  122222 22347999999874310 0000  


Q ss_pred             CCCCCccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEec
Q 009464          462 ETPIPKHALGHYALVFDAVYTPKIT--RLLREAEESGATIVS  501 (534)
Q Consensus       462 ~~~i~~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii~  501 (534)
                      ...+ ...+.++.+++|..-.+..+  .+.+..++.|..+++
T Consensus        78 ~~~l-~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~  118 (287)
T 3pdu_A           78 ANGV-LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLE  118 (287)
T ss_dssp             TTCG-GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             chhh-hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            0001 12356778899998654432  344455667776654

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.24  E-value=0.0011  Score=69.37  Aligned_cols=69  Identities=25%  Similarity=0.191  Sum_probs=50.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ..+.||+++|+|.|.+|++++..|...|++|++++|++.++.... ..+....+++   + ....+|++|.|++
T Consensus       216 ~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~v~~Le---e-al~~ADIVi~atg  284 (435)
T 3gvp_A          216 MMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFRLVKLN---E-VIRQVDIVITCTG  284 (435)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEECCHH---H-HTTTCSEEEECSS
T ss_pred             ceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCEeccHH---H-HHhcCCEEEECCC
Confidence            467899999999999999999999999999999999987764432 3332222332   2 2345677776543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.24  E-value=0.00054  Score=66.97  Aligned_cols=45  Identities=42%  Similarity=0.508  Sum_probs=40.8

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHc
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVG  428 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~-v~i~~R~~~~a~~la~~~~  428 (534)
                      +.++.|+|+|.+|++++..|.+.|++ |++++|+.++++++.+.++
T Consensus        10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g   55 (266)
T 3d1l_A           10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE   55 (266)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT
T ss_pred             CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC
Confidence            45799999999999999999999997 9999999999999888754

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=97.24  E-value=0.00014  Score=73.95  Aligned_cols=119  Identities=13%  Similarity=0.109  Sum_probs=77.1

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+..+.+. +..++....+++++    ...+|+|+.++|....  
T Consensus       141 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~~~~g~~~~~l~el----l~~aDvV~l~~P~t~~--  213 (330)
T 4e5n_A          141 TGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQT-EQRLGLRQVACSEL----FASSDFILLALPLNAD--  213 (330)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHH-HHHHTEEECCHHHH----HHHCSEEEECCCCSTT--
T ss_pred             CccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhH-HHhcCceeCCHHHH----HhhCCEEEEcCCCCHH--
Confidence            4678999999999999999999999999999999998643322 23333332233332    3357999999986522  


Q ss_pred             CCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHH
Q 009464          460 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       460 ~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                       ....+..+   .++++.+++|+.-.+. .+.-+..|.+.|...--|++.+
T Consensus       214 -t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~  263 (330)
T 4e5n_A          214 -TLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVF  263 (330)
T ss_dssp             -TTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred             -HHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEeccc
Confidence             11224432   3567889999986543 4444555555443222344444

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=97.24  E-value=0.00015  Score=74.14  Aligned_cols=109  Identities=19%  Similarity=0.135  Sum_probs=71.7

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      +..+.||++.|+|.|.+|+++|..|...|++|+.++|+....+...   +....  +++.+ .+.++|+|+.++|.... 
T Consensus       168 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---g~~~~--~~l~e-ll~~sDvV~l~~Plt~~-  240 (345)
T 4g2n_A          168 GMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE---GAIYH--DTLDS-LLGASDIFLIAAPGRPE-  240 (345)
T ss_dssp             BCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT---TCEEC--SSHHH-HHHTCSEEEECSCCCGG-
T ss_pred             ccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc---CCeEe--CCHHH-HHhhCCEEEEecCCCHH-
Confidence            3568899999999999999999999999999999999864332211   22222  23333 23468999999986521 


Q ss_pred             CCCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHCC
Q 009464          459 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESG  496 (534)
Q Consensus       459 ~~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G  496 (534)
                       + ...+...   .++++.+++|+.-.+. .+.-+..|.+.|
T Consensus       241 -T-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g  280 (345)
T 4g2n_A          241 -L-KGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSK  280 (345)
T ss_dssp             -G-TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred             -H-HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence             1 1123333   3567788888876543 444445554444

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.24  E-value=0.00043  Score=66.33  Aligned_cols=76  Identities=16%  Similarity=0.164  Sum_probs=52.2

Q ss_pred             CcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          377 GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       377 ~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      |...++++++|||+|+|.+|...+..|.+.|++|+|++.+.. ..+++++........ .......+..+|+||-+|+
T Consensus        24 Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~-~~~~~~dL~~adLVIaAT~  100 (223)
T 3dfz_A           24 TVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKR-KKVGEEDLLNVFFIVVATN  100 (223)
T ss_dssp             EEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEEC-SCCCGGGSSSCSEEEECCC
T ss_pred             ccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEE-CCCCHhHhCCCCEEEECCC
Confidence            355689999999999999999999999999999999987653 455666543222111 0011102345778877765

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.23  E-value=0.00014  Score=71.06  Aligned_cols=72  Identities=18%  Similarity=0.289  Sum_probs=51.1

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH-------------------HHHHHHHHHHcC-----cccc--
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY-------------------DRARELAETVGG-----HALS--  433 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~-------------------~~a~~la~~~~~-----~~~~--  433 (534)
                      .+++++|+|+|+||+|.+++..|+..|+ +++|++++.                   .|++.+++.+..     +...  
T Consensus        25 ~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           25 KLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            3567899999999999999999999999 999995432                   678888777642     1111  


Q ss_pred             --c--ccccccCCCCceEEEEcCC
Q 009464          434 --L--ADLENFNPEDGMILANTTS  453 (534)
Q Consensus       434 --~--~~~~~~~~~~~divVn~t~  453 (534)
                        +  +++.+ .+..+|+||+|+.
T Consensus       105 ~~~~~~~~~~-~~~~~DvVi~~~d  127 (251)
T 1zud_1          105 QRLTGEALKD-AVARADVVLDCTD  127 (251)
T ss_dssp             SCCCHHHHHH-HHHHCSEEEECCS
T ss_pred             ccCCHHHHHH-HHhcCCEEEECCC
Confidence              1  11112 1235799999875

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.23  E-value=0.00049  Score=60.60  Aligned_cols=116  Identities=20%  Similarity=0.142  Sum_probs=71.6

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc-----ccccccccCCCCceEEEEcCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-----SLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~-----~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .++++|+|.|.+|+.++..|.+.|.+|+++++++++.+.+.+ .+....     +.+.+.+.....+|++|.+++-... 
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~-   84 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYE-   84 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHH-
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHH-
Confidence            357999999999999999999999999999999999888765 332221     1112222234578999988863210 


Q ss_pred             CCCCCCCC--ccccCCCCEEEEEecCCChhHHHHHHHHCCCe-EeccHHHHH
Q 009464          459 KVDETPIP--KHALGHYALVFDAVYTPKITRLLREAEESGAT-IVSGLEMFI  507 (534)
Q Consensus       459 ~~~~~~i~--~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~-ii~Gl~ml~  507 (534)
                         ...+-  ...+.+...++-.+.++...   +..++.|+. +++--....
T Consensus        85 ---n~~~~~~a~~~~~~~~iiar~~~~~~~---~~l~~~G~d~vi~p~~~~a  130 (140)
T 3fwz_A           85 ---AGEIVASARAKNPDIEIIARAHYDDEV---AYITERGANQVVMGEREIA  130 (140)
T ss_dssp             ---HHHHHHHHHHHCSSSEEEEEESSHHHH---HHHHHTTCSEEEEHHHHHH
T ss_pred             ---HHHHHHHHHHHCCCCeEEEEECCHHHH---HHHHHCCCCEEECchHHHH
Confidence               00000  11123344566666555444   444667885 455444333

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=97.23  E-value=0.00014  Score=72.63  Aligned_cols=104  Identities=15%  Similarity=0.129  Sum_probs=69.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+.++.+.      ..  ..+++.+ ....+|+|+.++|....  
T Consensus       118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~--~~~~l~e-ll~~aDiV~l~~P~t~~--  186 (290)
T 3gvx_A          118 TLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DV--ISESPAD-LFRQSDFVLIAIPLTDK--  186 (290)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SE--ECSSHHH-HHHHCSEEEECCCCCTT--
T ss_pred             eeeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------cc--ccCChHH-HhhccCeEEEEeecccc--
Confidence            3578999999999999999999999999999999998754321      11  1122333 23458999999986532  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hh-HHHHHHHHC
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-IT-RLLREAEES  495 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~  495 (534)
                      + ...+..   ..++++.+++|+.-.+. .+ .+.+..++.
T Consensus       187 t-~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g  226 (290)
T 3gvx_A          187 T-RGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKER  226 (290)
T ss_dssp             T-TTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred             c-hhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhc
Confidence            1 112333   34678889999986543 44 444444444

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.23  E-value=0.0001  Score=68.70  Aligned_cols=62  Identities=21%  Similarity=0.259  Sum_probs=43.1

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc--CCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF--NPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~--~~~~~divVn~t~~g  455 (534)
                      +++|+|+ ||+|++++..|+ .|++|++++|+.+       .+..+..+.+++.++  ..+.+|+|||+++..
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~   69 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSA   69 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            7999999 899999999999 9999999999854       011111111111110  124589999999865

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=97.23  E-value=0.00046  Score=69.85  Aligned_cols=107  Identities=16%  Similarity=0.091  Sum_probs=71.4

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R-~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++| +.++.  .+..++....  +++.+ ....+|+|+.++|.... 
T Consensus       142 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~~~~g~~~~--~~l~e-ll~~aDvVil~~p~~~~-  215 (320)
T 1gdh_A          142 EKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS--DEASYQATFH--DSLDS-LLSVSQFFSLNAPSTPE-  215 (320)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH--HHHHHTCEEC--SSHHH-HHHHCSEEEECCCCCTT-
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh--hhhhcCcEEc--CCHHH-HHhhCCEEEEeccCchH-
Confidence            467899999999999999999999999999999999 77652  3344444332  12222 23457999999986521 


Q ss_pred             CCCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHH
Q 009464          459 KVDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEE  494 (534)
Q Consensus       459 ~~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~  494 (534)
                       + ...+..   ..++++.+++|+.-.+. .+.-+..+-+
T Consensus       216 -t-~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~  253 (320)
T 1gdh_A          216 -T-RYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALE  253 (320)
T ss_dssp             -T-TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred             -H-HhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence             1 112332   34677788999986543 3333344433

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.22  E-value=4.2e-05  Score=73.51  Aligned_cols=69  Identities=13%  Similarity=0.121  Sum_probs=48.4

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHcCc--ccccc---cccccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH--ALSLA---DLENFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~~~~--~~~~~---~~~~~~~~~~divVn~t~  453 (534)
                      ..|+++|+|+ |++|++++..|++.| ++|+++.|+.++++++... +..  ..++.   ++.+ .+..+|+|||+++
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~-~~~~~D~vv~~a~   97 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPT-NSQIIMGDVLNHAALKQ-AMQGQDIVYANLT   97 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCT-TEEEEECCTTCHHHHHH-HHTTCSEEEEECC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccC-CcEEEEecCCCHHHHHH-HhcCCCEEEEcCC
Confidence            4588999998 999999999999999 7999999998875443210 001  11222   2222 3456799999876

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.21  E-value=5.6e-05  Score=72.80  Aligned_cols=68  Identities=15%  Similarity=0.112  Sum_probs=45.9

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc--C-CCCceEEEEcCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF--N-PEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~--~-~~~~divVn~t~~g  455 (534)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+.   .+..+..+.+++.++  . .+.+|+|||+++..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            57999999 999999999999999999999998654321   011111111111110  1 14689999999865

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.21  E-value=0.00033  Score=70.95  Aligned_cols=34  Identities=15%  Similarity=0.310  Sum_probs=30.2

Q ss_pred             CcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +|+++|+|+|   |+|+++|..|++.|++|++..|+.
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            6899999985   999999999999999999776654

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.21  E-value=0.0014  Score=69.55  Aligned_cols=97  Identities=18%  Similarity=0.175  Sum_probs=62.0

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH----HHHHHHHHHcCccccccc-ccccCCCC-ceEEEEcCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD----RARELAETVGGHALSLAD-LENFNPED-GMILANTTSI  454 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~----~a~~la~~~~~~~~~~~~-~~~~~~~~-~divVn~t~~  454 (534)
                      ++++|+++|+|.|++|.++|..|.++|++|++++++..    ..+.|. ..+.... ... ..+ .... +|+||-+.++
T Consensus         6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~-~~gi~~~-~g~~~~~-~~~~~~d~vv~spgi   82 (451)
T 3lk7_A            6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLL-EEGIKVV-CGSHPLE-LLDEDFCYMIKNPGI   82 (451)
T ss_dssp             TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHH-HTTCEEE-ESCCCGG-GGGSCEEEEEECTTS
T ss_pred             hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHH-hCCCEEE-ECCChHH-hhcCCCCEEEECCcC
Confidence            46789999999999999999999999999999998542    122222 1111110 000 000 0112 4544433322


Q ss_pred             CCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHHH
Q 009464          455 GMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIG  508 (534)
Q Consensus       455 g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~  508 (534)
                                                  |...|.++.|+++|++++.-.+++..
T Consensus        83 ----------------------------~~~~p~~~~a~~~gi~v~~~~e~~~~  108 (451)
T 3lk7_A           83 ----------------------------PYNNPMVKKALEKQIPVLTEVELAYL  108 (451)
T ss_dssp             ----------------------------CTTSHHHHHHHHTTCCEECHHHHHHH
T ss_pred             ----------------------------CCCChhHHHHHHCCCcEEeHHHHHHH
Confidence                                        33567888999999999888887654

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.21  E-value=0.00027  Score=67.20  Aligned_cols=91  Identities=14%  Similarity=0.159  Sum_probs=61.3

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      ..+++.|+|+|.+|++++..|.+.|.+|++++|+.++++++.+. +...   .+..+ ....+|+||.+++......  .
T Consensus        27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~---~~~~~-~~~~~DvVi~av~~~~~~~--v   99 (215)
T 2vns_A           27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-AAQV---TFQEE-AVSSPEVIFVAVFREHYSS--L   99 (215)
T ss_dssp             --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-TSEE---EEHHH-HTTSCSEEEECSCGGGSGG--G
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCce---ecHHH-HHhCCCEEEECCChHHHHH--H
Confidence            34689999999999999999999999999999999988766432 2111   13333 3456899999998532111  1


Q ss_pred             CCCCccccCCCCEEEEEecC
Q 009464          463 TPIPKHALGHYALVFDAVYT  482 (534)
Q Consensus       463 ~~i~~~~l~~~~~v~Dv~y~  482 (534)
                      ..+ ...+ ++.+++|+...
T Consensus       100 ~~l-~~~~-~~~~vv~~s~g  117 (215)
T 2vns_A          100 CSL-SDQL-AGKILVDVSNP  117 (215)
T ss_dssp             GGG-HHHH-TTCEEEECCCC
T ss_pred             HHH-HHhc-CCCEEEEeCCC
Confidence            111 1122 56789998854

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.21  E-value=0.0011  Score=69.30  Aligned_cols=69  Identities=32%  Similarity=0.335  Sum_probs=50.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ..+.||+++|+|.|.+|+++|..|...|++|++++|++.++.+.. ..+....++++    .+..+|+|+.+++
T Consensus       243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~vv~LeE----lL~~ADIVv~atg  311 (464)
T 3n58_A          243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFEVVTLDD----AASTADIVVTTTG  311 (464)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCEECCHHH----HGGGCSEEEECCS
T ss_pred             CcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCceeccHHH----HHhhCCEEEECCC
Confidence            568899999999999999999999999999999999987654432 22333333332    2234677766653

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.19  E-value=0.00022  Score=71.72  Aligned_cols=113  Identities=18%  Similarity=0.116  Sum_probs=73.1

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC-CC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK-VD  461 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~-~~  461 (534)
                      +-+++.|+|+|.+|.+++..|++.|++|++++|+.++++++.+. +...  ..+..+ ....+|+||-++|....-. .-
T Consensus        20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~~--~~~~~~-~~~~aDvvi~~vp~~~~~~~v~   95 (310)
T 3doj_A           20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-GASV--CESPAE-VIKKCKYTIAMLSDPCAALSVV   95 (310)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TCEE--CSSHHH-HHHHCSEEEECCSSHHHHHHHH
T ss_pred             cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCeE--cCCHHH-HHHhCCEEEEEcCCHHHHHHHH
Confidence            34689999999999999999999999999999999999888743 2221  122222 2234799999887431100 00


Q ss_pred             --CCCCCccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEe
Q 009464          462 --ETPIPKHALGHYALVFDAVYTPKIT--RLLREAEESGATIV  500 (534)
Q Consensus       462 --~~~i~~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii  500 (534)
                        ...+ ...+.++.+++|+.-.+..+  .+.+..++.|..++
T Consensus        96 ~~~~~l-~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v  137 (310)
T 3doj_A           96 FDKGGV-LEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFV  137 (310)
T ss_dssp             HSTTCG-GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             hCchhh-hhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence              0001 12456778999998654433  34445566776544

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=97.19  E-value=0.00025  Score=75.84  Aligned_cols=115  Identities=21%  Similarity=0.228  Sum_probs=74.4

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc-cccccccccCCCCceEEEEcCCCCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA-LSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~-~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      .+.+++.|+|+|.||.+++..|++.|.+|+++||+.++++++.+...   ... .+.+++.+ .+..+|+||-+++.+..
T Consensus        13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~-~l~~aDvVil~Vp~~~~   91 (480)
T 2zyd_A           13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVE-SLETPRRILLMVKAGAG   91 (480)
T ss_dssp             --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHH-TBCSSCEEEECSCSSSH
T ss_pred             cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHh-CCCCCCEEEEECCCHHH
Confidence            34678999999999999999999999999999999999999887642   111 12222222 22348999999886421


Q ss_pred             CCCCCCCCC--ccccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEe
Q 009464          458 PKVDETPIP--KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIV  500 (534)
Q Consensus       458 ~~~~~~~i~--~~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii  500 (534)
                        .+. -+.  ...++++.+++|+.-... .| .+.+..++.|..++
T Consensus        92 --v~~-vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v  135 (480)
T 2zyd_A           92 --TDA-AIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFI  135 (480)
T ss_dssp             --HHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             --HHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCee
Confidence              000 011  123566789999875533 33 34444556676554

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.18  E-value=0.00042  Score=68.01  Aligned_cols=68  Identities=15%  Similarity=0.198  Sum_probs=51.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccccccccCCCCceEEEEcCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      .++++|+|||.+|++++..|.+.|++|+++.|+.++.+.+... +.+.  .++.++.   ..++|+|||+++..
T Consensus         5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~d~~---~~~~d~vi~~a~~~   74 (286)
T 3ius_A            5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRAS-GAEPLLWPGEEPS---LDGVTHLLISTAPD   74 (286)
T ss_dssp             CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHT-TEEEEESSSSCCC---CTTCCEEEECCCCB
T ss_pred             cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhC-CCeEEEecccccc---cCCCCEEEECCCcc
Confidence            4789999999999999999999999999999999887666432 1111  2333332   46789999998753

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=97.17  E-value=0.00058  Score=69.87  Aligned_cols=107  Identities=19%  Similarity=0.240  Sum_probs=70.5

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc-ccccccccCCCCceEEEEcCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++.  .+..++.... +++++    ...+|+|+.++|.... 
T Consensus       164 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~~~~l~el----l~~aDvV~l~~P~t~~-  236 (347)
T 1mx3_A          164 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG--VERALGLQRVSTLQDL----LFHSDCVTLHCGLNEH-  236 (347)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT--HHHHHTCEECSSHHHH----HHHCSEEEECCCCCTT-
T ss_pred             cCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh--hHhhcCCeecCCHHHH----HhcCCEEEEcCCCCHH-
Confidence            36789999999999999999999999999999999986542  2344443221 23322    3357999999886421 


Q ss_pred             CCCCCCCCc---cccCCCCEEEEEecCCC-hhH-HHHHHHHC
Q 009464          459 KVDETPIPK---HALGHYALVFDAVYTPK-ITR-LLREAEES  495 (534)
Q Consensus       459 ~~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~-ll~~A~~~  495 (534)
                       + ..-+..   ..++++.+++|+.-.+. .+. +.+..++.
T Consensus       237 -t-~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g  276 (347)
T 1mx3_A          237 -N-HHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEG  276 (347)
T ss_dssp             -C-TTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred             -H-HHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhC
Confidence             1 112332   24567788899887654 333 44444443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.17  E-value=7.3e-05  Score=72.20  Aligned_cols=73  Identities=19%  Similarity=0.134  Sum_probs=47.0

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHH-CCCeEEEEeCCHH-HHHHHHHHHcCcccccccccc----cCCCCceEEEEcCCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKA-KGARVVIANRTYD-RARELAETVGGHALSLADLEN----FNPEDGMILANTTSIG  455 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~-~G~~v~i~~R~~~-~a~~la~~~~~~~~~~~~~~~----~~~~~~divVn~t~~g  455 (534)
                      ++|+++|+|+ ||+|++++..|++ .|++|++++|+.+ ..+++ ..+..+..+.+++.+    ......|+|||++++.
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~   81 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL-KFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGIL   81 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE-EEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc-eEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccC
Confidence            4789999999 8999999999999 6779999998865 22111 000011111111111    1234789999999875


Q ss_pred             C
Q 009464          456 M  456 (534)
Q Consensus       456 ~  456 (534)
                      .
T Consensus        82 ~   82 (244)
T 4e4y_A           82 I   82 (244)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.17  E-value=0.00093  Score=59.58  Aligned_cols=137  Identities=12%  Similarity=0.102  Sum_probs=78.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHcC--cc-----cccccccccCCCCceEEEEcCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGG--HA-----LSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~~--~~-----~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      .++++|+|+|.+|+.++..|.+.|.+|++++|+ .++++.+.+.+..  ..     .+.+.+.+.....+|.||.+++-.
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d   82 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND   82 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence            467999999999999999999999999999997 6777777665532  11     111222222356789999988631


Q ss_pred             CCCCCCCCCCC--ccccCCCCEEEEEecCCChhHHHHHHHHCCCe-EeccHHHHHHHHHHHHHHhcCCCCCHHHHHHH
Q 009464          456 MQPKVDETPIP--KHALGHYALVFDAVYTPKITRLLREAEESGAT-IVSGLEMFIGQAYEQYERFTGLPAPKELFQKI  530 (534)
Q Consensus       456 ~~~~~~~~~i~--~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~-ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~  530 (534)
                      .    ....+.  ...+.+...++-...+|.....+   ++.|.. +++-..... +...+  .-.+.....+.+.+.
T Consensus        83 ~----~n~~~~~~a~~~~~~~~ii~~~~~~~~~~~l---~~~G~~~vi~p~~~~~-~~l~~--~~~~~~~~~~~~~~~  150 (153)
T 1id1_A           83 A----DNAFVVLSAKDMSSDVKTVLAVSDSKNLNKI---KMVHPDIILSPQLFGS-EILAR--VLNGEEINNDMLVSM  150 (153)
T ss_dssp             H----HHHHHHHHHHHHTSSSCEEEECSSGGGHHHH---HTTCCSEEECHHHHHH-HHHHH--HHTTCCCCHHHHHHT
T ss_pred             H----HHHHHHHHHHHHCCCCEEEEEECCHHHHHHH---HHcCCCEEEcHHHHHH-HHHHH--HHhCCCCcHHHHHHH
Confidence            0    000000  01122222334344566554443   567885 554433333 23222  223556666666553

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.17  E-value=0.00061  Score=64.59  Aligned_cols=112  Identities=16%  Similarity=0.102  Sum_probs=70.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-----cccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-----~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      +++|+|+|.+|+.++..|.+.|.+|+++++++++++++++..+...     .+.+.+.+.....+|++|.+++-...   
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~---   78 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEV---   78 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHH---
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHH---
Confidence            5899999999999999999999999999999999999887654322     12222333245678999988863210   


Q ss_pred             CCCCCC--ccccCCCCEEEEEecCCChhHHHHHHHHCCCe-EeccHH
Q 009464          461 DETPIP--KHALGHYALVFDAVYTPKITRLLREAEESGAT-IVSGLE  504 (534)
Q Consensus       461 ~~~~i~--~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~-ii~Gl~  504 (534)
                       ...+.  ...+.+...++-.+.++.....+   ++.|.. +++--.
T Consensus        79 -n~~~~~~a~~~~~~~~iia~~~~~~~~~~l---~~~G~d~vi~p~~  121 (218)
T 3l4b_C           79 -NLFIAQLVMKDFGVKRVVSLVNDPGNMEIF---KKMGITTVLNLTT  121 (218)
T ss_dssp             -HHHHHHHHHHTSCCCEEEECCCSGGGHHHH---HHHTCEECCCHHH
T ss_pred             -HHHHHHHHHHHcCCCeEEEEEeCcchHHHH---HHCCCCEEECHHH
Confidence             00000  01122333444455556555444   555876 445433

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=97.15  E-value=2.5e-05  Score=76.61  Aligned_cols=69  Identities=16%  Similarity=0.087  Sum_probs=47.9

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc---ccccCCCCceEEEEcCCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENFNPEDGMILANTTSIG  455 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~---~~~~~~~~~divVn~t~~g  455 (534)
                      +|+++|+|+ |++|++++..|++.|++|++.+|+.++.+.  ........++.+   +.+ ....+|+|||+++..
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~Dl~d~~~~~~-~~~~~D~vi~~Ag~~   75 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAG--PNEECVQCDLADANAVNA-MVAGCDGIVHLGGIS   75 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCC--TTEEEEECCTTCHHHHHH-HHTTCSEEEECCSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccC--CCCEEEEcCCCCHHHHHH-HHcCCCEEEECCCCc
Confidence            578999998 999999999999999999999998765320  000000112222   222 234689999999863

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.14  E-value=0.00015  Score=73.58  Aligned_cols=73  Identities=18%  Similarity=0.262  Sum_probs=47.8

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHHc------Ccc----ccccc---cc----ccCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD---RARELAETVG------GHA----LSLAD---LE----NFNP  442 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~---~a~~la~~~~------~~~----~~~~~---~~----~~~~  442 (534)
                      +|+++|+|+ ||+|++++..|++.|++|+++.|+.+   +..+..+...      ...    .++.+   +.    ....
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            689999999 89999999999999998887776543   3333333221      111    12221   11    1122


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|+|||+++++.
T Consensus        82 g~iD~lVnnAG~~~   95 (327)
T 1jtv_A           82 GRVDVLVCNAGLGL   95 (327)
T ss_dssp             SCCSEEEECCCCCC
T ss_pred             CCCCEEEECCCcCC
Confidence            46899999998753

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.14  E-value=0.00036  Score=88.51  Aligned_cols=74  Identities=16%  Similarity=0.196  Sum_probs=56.0

Q ss_pred             ccCCcEEEEEcC-ch-hHHHHHHHHHHCCCeEEEEeCCHHH-----HHHHHHHHcCc---c----ccccc---cccc---
Q 009464          381 ALAGKLFVVIGA-GG-AGKALAYGAKAKGARVVIANRTYDR-----ARELAETVGGH---A----LSLAD---LENF---  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG-~graia~~L~~~G~~v~i~~R~~~~-----a~~la~~~~~~---~----~~~~~---~~~~---  440 (534)
                      .++||+++|+|+ +| +|+++|..|++.|++|++++|+.++     ++++++++...   .    +++.+   +.++   
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            488999999999 58 9999999999999999999998776     77777777421   1    12211   1110   


Q ss_pred             -------CCCCceEEEEcCCC
Q 009464          441 -------NPEDGMILANTTSI  454 (534)
Q Consensus       441 -------~~~~~divVn~t~~  454 (534)
                             ..+..|++|||+++
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCC
T ss_pred             HHhhhhhhcCCCCEEEECCCc
Confidence                   23578999999987

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.13  E-value=0.0025  Score=66.63  Aligned_cols=94  Identities=27%  Similarity=0.243  Sum_probs=63.5

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||+++|+|.|.+|+++|..|...|++|++++++..++.... ..+....++   .+ ....+|+||.+++-.  ..
T Consensus       207 ~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~~sL---~e-al~~ADVVilt~gt~--~i  279 (436)
T 3h9u_A          207 VMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQVLLV---ED-VVEEAHIFVTTTGND--DI  279 (436)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEECCH---HH-HTTTCSEEEECSSCS--CS
T ss_pred             CcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCeecCH---HH-HHhhCCEEEECCCCc--Cc
Confidence            467899999999999999999999999999999999987765433 233333333   33 345689999765421  10


Q ss_pred             CCCCCCCccccCCCCEEEEEecC
Q 009464          460 VDETPIPKHALGHYALVFDAVYT  482 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~  482 (534)
                      .+..  ....++++.+++++.-.
T Consensus       280 I~~e--~l~~MK~gAIVINvgRg  300 (436)
T 3h9u_A          280 ITSE--HFPRMRDDAIVCNIGHF  300 (436)
T ss_dssp             BCTT--TGGGCCTTEEEEECSSS
T ss_pred             cCHH--HHhhcCCCcEEEEeCCC
Confidence            0111  11334677788887643

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=97.13  E-value=0.00099  Score=64.84  Aligned_cols=64  Identities=25%  Similarity=0.322  Sum_probs=51.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ++.|+|+|.+|.+++..|.+.| .+|++++|+.++++++.+.++...  ..+..+ .. .+|+||-+++
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~--~~~~~~-~~-~~D~vi~~v~   66 (263)
T 1yqg_A            2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET--SATLPE-LH-SDDVLILAVK   66 (263)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE--ESSCCC-CC-TTSEEEECSC
T ss_pred             EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEE--eCCHHH-Hh-cCCEEEEEeC
Confidence            5899999999999999999999 899999999999999887765332  223333 34 6788888776

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=97.13  E-value=0.00029  Score=72.63  Aligned_cols=96  Identities=16%  Similarity=0.171  Sum_probs=62.6

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~-v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++ |++++|+.++.+. +..++....  +++.+ .+..+|+|+.++|.... 
T Consensus       160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~-~~~~g~~~~--~~l~e-ll~~aDvV~l~~P~t~~-  234 (364)
T 2j6i_A          160 YDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDA-EEKVGARRV--ENIEE-LVAQADIVTVNAPLHAG-  234 (364)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHH-HHHTTEEEC--SSHHH-HHHTCSEEEECCCCSTT-
T ss_pred             ccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhH-HHhcCcEec--CCHHH-HHhcCCEEEECCCCChH-
Confidence            468899999999999999999999999997 9999998754432 333332221  22333 23357999999886421 


Q ss_pred             CCCCCCCCc---cccCCCCEEEEEecC
Q 009464          459 KVDETPIPK---HALGHYALVFDAVYT  482 (534)
Q Consensus       459 ~~~~~~i~~---~~l~~~~~v~Dv~y~  482 (534)
                       + ...+..   ..++++.+++++.-.
T Consensus       235 -t-~~li~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          235 -T-KGLINKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             -T-TTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             -H-HHHhCHHHHhhCCCCCEEEECCCC
Confidence             1 111322   234555666666654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.12  E-value=8.6e-05  Score=74.90  Aligned_cols=76  Identities=17%  Similarity=0.203  Sum_probs=51.1

Q ss_pred             ccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-c--cccccc---ccccCCC--CceEEE
Q 009464          379 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--ALSLAD---LENFNPE--DGMILA  449 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~--~~~~~~---~~~~~~~--~~divV  449 (534)
                      ...+++++++|+|+ |++|++++..|.+.|++|++++|+.+...++.+.+.. .  ..++.+   +.+ ...  .+|+||
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~-~~~~~~~D~vi   93 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLER-AFDSFKPTHVV   93 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHH-HHHHHCCSEEE
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHH-HHhhcCCCEEE
Confidence            35678999999999 9999999999999999999999965432211111111 1  112222   222 223  689999


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      |+++..
T Consensus        94 h~A~~~   99 (330)
T 2pzm_A           94 HSAAAY   99 (330)
T ss_dssp             ECCCCC
T ss_pred             ECCccC
Confidence            999764

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=97.12  E-value=0.00047  Score=70.21  Aligned_cols=105  Identities=17%  Similarity=0.178  Sum_probs=67.6

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++  +.+..++....   ++.+ .+..+|+|+.++|....  
T Consensus       142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~---~l~e-~l~~aDiVil~vp~~~~--  213 (333)
T 2d0i_A          142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV--NVEKELKARYM---DIDE-LLEKSDIVILALPLTRD--  213 (333)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH--HHHHHHTEEEC---CHHH-HHHHCSEEEECCCCCTT--
T ss_pred             CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch--hhhhhcCceec---CHHH-HHhhCCEEEEcCCCChH--
Confidence            3578999999999999999999999999999999999875  33334432222   2222 23357999999886521  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEE  494 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~  494 (534)
                      . ...+..   ..++++ +++|+.-.+. .+.-+..+.+
T Consensus       214 t-~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~  250 (333)
T 2d0i_A          214 T-YHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIK  250 (333)
T ss_dssp             T-TTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHH
T ss_pred             H-HHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHH
Confidence            1 112322   235666 8888775433 3333333433

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=97.11  E-value=0.00036  Score=69.35  Aligned_cols=38  Identities=29%  Similarity=0.367  Sum_probs=34.0

Q ss_pred             cccCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .++++|+++|+|+   ||+|++++..|++.|++|++++|+.
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~   44 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccc
Confidence            3567899999998   6999999999999999999998764

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.11  E-value=0.00027  Score=71.37  Aligned_cols=113  Identities=14%  Similarity=0.083  Sum_probs=69.6

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCC-CeEEEEeCCH---HHHHHHHHHHcCcccccc-cccccCCCCceEEEEcCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTY---DRARELAETVGGHALSLA-DLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G-~~v~i~~R~~---~~a~~la~~~~~~~~~~~-~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .+++.|+|+|.+|.+++..|++.| .+|++++|+.   +++++..+.+..... .. +..+ ....+|+||-++|.....
T Consensus        24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~~e-~~~~aDvVi~avp~~~~~  101 (317)
T 4ezb_A           24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDDVA-GIACADVVLSLVVGAATK  101 (317)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESSGG-GGGGCSEEEECCCGGGHH
T ss_pred             CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCHHH-HHhcCCEEEEecCCHHHH
Confidence            368999999999999999999999 8999999997   333333333211111 23 3333 345689999988754211


Q ss_pred             CCCCCCCCccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEe
Q 009464          459 KVDETPIPKHALGHYALVFDAVYTPKIT--RLLREAEESGATIV  500 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii  500 (534)
                      .. ...+ ...++++.+++|..-.+..|  .+.+..++.|..++
T Consensus       102 ~~-~~~i-~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~  143 (317)
T 4ezb_A          102 AV-AASA-APHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFV  143 (317)
T ss_dssp             HH-HHHH-GGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEE
T ss_pred             HH-HHHH-HhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence            00 0000 12356778999998654433  33344456676544

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=97.10  E-value=0.00032  Score=71.83  Aligned_cols=110  Identities=17%  Similarity=0.176  Sum_probs=70.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~-~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      ..+.|+++.|+|.|.+|++++..|. ..|++|++++|+.++.+.. .+++....  .++.+ .+..+|+|+.++|.....
T Consensus       159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~-~~~g~~~~--~~l~e-ll~~aDvVil~vp~~~~t  234 (348)
T 2w2k_A          159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE-KALGAERV--DSLEE-LARRSDCVSVSVPYMKLT  234 (348)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH-HHHTCEEC--SSHHH-HHHHCSEEEECCCCSGGG
T ss_pred             cCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH-hhcCcEEe--CCHHH-HhccCCEEEEeCCCChHH
Confidence            4678999999999999999999999 9999999999987655442 33333322  12222 233579999998865211


Q ss_pred             CCCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCC
Q 009464          459 KVDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESG  496 (534)
Q Consensus       459 ~~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G  496 (534)
                         ...+..   ..++++.+++|+.-.+. .+.-+..+.+.|
T Consensus       235 ---~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~  273 (348)
T 2w2k_A          235 ---HHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSG  273 (348)
T ss_dssp             ---TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred             ---HHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhC
Confidence               111222   23566777877765533 333344444444

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=97.10  E-value=0.00055  Score=69.56  Aligned_cols=107  Identities=15%  Similarity=0.129  Sum_probs=69.7

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.++++.|+|.|.+|++++..|...|++|++++|+.++.+.. ..++....   ++.+ ....+|+|+.++|..... 
T Consensus       151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~---~l~e-~l~~aDvVi~~vp~~~~t-  224 (330)
T 2gcg_A          151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-AEFQAEFV---STPE-LAAQSDFIVVACSLTPAT-  224 (330)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH-HTTTCEEC---CHHH-HHHHCSEEEECCCCCTTT-
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH-HhcCceeC---CHHH-HHhhCCEEEEeCCCChHH-
Confidence            46789999999999999999999999999999999987655443 22222222   2222 234579999999865221 


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hh-HHHHHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-IT-RLLREAEE  494 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~  494 (534)
                        ...+..   ..++++.+++++.-.+. .+ .+.+..++
T Consensus       225 --~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~  262 (330)
T 2gcg_A          225 --EGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALAS  262 (330)
T ss_dssp             --TTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred             --HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHc
Confidence              112321   24567778888776533 33 44444444

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=97.08  E-value=0.00013  Score=74.55  Aligned_cols=40  Identities=38%  Similarity=0.372  Sum_probs=36.8

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|++++|+.++
T Consensus       167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~  206 (340)
T 4dgs_A          167 HSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS  206 (340)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT
T ss_pred             ccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc
Confidence            4678999999999999999999999999999999998754

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=97.08  E-value=0.00028  Score=71.87  Aligned_cols=117  Identities=14%  Similarity=0.168  Sum_probs=76.4

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++.  + +.+ ....  +++.+ ....+|+|+.++|....  
T Consensus       142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~~~--~~l~e-ll~~aDvV~l~~p~~~~--  212 (333)
T 1j4a_A          142 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EKK-GYYV--DSLDD-LYKQADVISLHVPDVPA--  212 (333)
T ss_dssp             CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HHT-TCBC--SCHHH-HHHHCSEEEECSCCCGG--
T ss_pred             ccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hhh-Ceec--CCHHH-HHhhCCEEEEcCCCcHH--
Confidence            46789999999999999999999999999999999987654  2 222 2222  12323 23457999999986421  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                      + ...+..   ..++++.+++|+...+. .+.-+.+|.+.|...--|++.+
T Consensus       213 t-~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~  262 (333)
T 1j4a_A          213 N-VHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVY  262 (333)
T ss_dssp             G-TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred             H-HHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecC
Confidence            1 112332   34577889999987643 4555555555543333444443

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.07  E-value=0.00041  Score=68.76  Aligned_cols=70  Identities=13%  Similarity=0.202  Sum_probs=49.2

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-------HHHHHHHHH--HcCcc--ccccc---ccccCCCCceEE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-------DRARELAET--VGGHA--LSLAD---LENFNPEDGMIL  448 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-------~~a~~la~~--~~~~~--~~~~~---~~~~~~~~~div  448 (534)
                      +++++|+|| |++|++++.+|.+.|++|+++.|+.       ++++.+.+.  .+...  .++.+   +.+ .+.++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~-~~~~~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVK-AIKQVDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHH-HHTTCSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHH-HHhCCCEE
Confidence            467999999 9999999999999999999999986       666554321  12211  12222   223 34568999


Q ss_pred             EEcCCC
Q 009464          449 ANTTSI  454 (534)
Q Consensus       449 Vn~t~~  454 (534)
                      ||+++.
T Consensus        81 i~~a~~   86 (307)
T 2gas_A           81 ICAAGR   86 (307)
T ss_dssp             EECSSS
T ss_pred             EECCcc
Confidence            999874

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=97.07  E-value=0.0003  Score=70.92  Aligned_cols=101  Identities=24%  Similarity=0.242  Sum_probs=66.8

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|++++..|...|++|++++|+.++.+     .     ...++.+ ....+|+|+.++|..... 
T Consensus       140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----~-----~~~~l~e-ll~~aDvV~l~~p~~~~t-  207 (311)
T 2cuk_A          140 LDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-----Y-----PFLSLEE-LLKEADVVSLHTPLTPET-  207 (311)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----S-----CBCCHHH-HHHHCSEEEECCCCCTTT-
T ss_pred             cCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-----c-----ccCCHHH-HHhhCCEEEEeCCCChHH-
Confidence            467899999999999999999999999999999999876532     1     1222222 233579999988765211 


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEE  494 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~  494 (534)
                        ...+..   ..++++.+++|+.-.+. .+.-+..+.+
T Consensus       208 --~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~  244 (311)
T 2cuk_A          208 --HRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR  244 (311)
T ss_dssp             --TTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred             --HhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence              111221   24567778888876543 3333344443

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.07  E-value=0.00037  Score=66.41  Aligned_cols=67  Identities=18%  Similarity=0.224  Sum_probs=52.5

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i-~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      .++.|+|+|.+|.+++..|.+.|.+|++ ++|+.++++++++.++.....  +..+ ....+|+||-+++.
T Consensus        24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~--~~~~-~~~~aDvVilavp~   91 (220)
T 4huj_A           24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA--VELK-DALQADVVILAVPY   91 (220)
T ss_dssp             CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE--CCHH-HHTTSSEEEEESCG
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc--ChHH-HHhcCCEEEEeCCh
Confidence            5799999999999999999999999988 999999999998887643211  1111 12457888888864

>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}

Probab=97.07  E-value=0.00018  Score=74.33  Aligned_cols=94  Identities=16%  Similarity=0.190  Sum_probs=59.7

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+.+...     ...   .+.++.+ .+..+|+|+.++|....+.
T Consensus       115 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-----~~~---~~~sl~e-ll~~aDiV~l~~Plt~~g~  185 (381)
T 3oet_A          115 FSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG-----DEG---DFRTLDE-LVQEADVLTFHTPLYKDGP  185 (381)
T ss_dssp             CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT-----CCS---CBCCHHH-HHHHCSEEEECCCCCCSST
T ss_pred             CccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc-----cCc---ccCCHHH-HHhhCCEEEEcCcCCcccc
Confidence            467899999999999999999999999999999998644321     111   2223333 2345799999888653210


Q ss_pred             -CCCCCCCcc---ccCCCCEEEEEecC
Q 009464          460 -VDETPIPKH---ALGHYALVFDAVYT  482 (534)
Q Consensus       460 -~~~~~i~~~---~l~~~~~v~Dv~y~  482 (534)
                       .....+...   .++++.+++|+.-.
T Consensus       186 ~~T~~li~~~~l~~mk~gailIN~aRG  212 (381)
T 3oet_A          186 YKTLHLADETLIRRLKPGAILINACRG  212 (381)
T ss_dssp             TCCTTSBCHHHHHHSCTTEEEEECSCG
T ss_pred             ccchhhcCHHHHhcCCCCcEEEECCCC
Confidence             011123322   24555666666543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=97.04  E-value=0.00023  Score=71.61  Aligned_cols=37  Identities=32%  Similarity=0.386  Sum_probs=33.7

Q ss_pred             ccCCcEEEEEcC---chhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          381 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       381 ~l~~k~vlVlGa---GG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ++++|+++|+|+   ||+|++++..|++.|++|++++|+.
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~   45 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPP   45 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHH
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEeccc
Confidence            467899999996   8999999999999999999998864

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=97.02  E-value=0.001  Score=80.64  Aligned_cols=48  Identities=23%  Similarity=0.432  Sum_probs=40.6

Q ss_pred             cccCCcEEEEEcC-ch-hHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHH
Q 009464          380 SALAGKLFVVIGA-GG-AGKALAYGAKAKGARVVIA-NRTYDRARELAETV  427 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG-~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~  427 (534)
                      ..+++|++||+|+ || +|++++..|++.|++|+++ .|+.++++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL  721 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSI  721 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHH
Confidence            5688999999999 67 9999999999999999998 68877776655444

>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A

Probab=97.02  E-value=0.017  Score=60.58  Aligned_cols=133  Identities=17%  Similarity=0.176  Sum_probs=86.0

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEE-EEeC----------CHHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~-i~~R----------~~~~a~~la~  425 (534)
                      +.|.+.+++..++.       .+.++++++++|.|.|.+|+.++..|.++|++|+ |.++          +.+.+.++.+
T Consensus       215 g~Gv~~~~~~~~~~-------~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~  287 (440)
T 3aog_A          215 GRGVFITAAAAAEK-------IGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQ  287 (440)
T ss_dssp             HHHHHHHHHHHHHH-------HTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-------cCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHH
Confidence            56777777665543       1357889999999999999999999999999876 7777          6788888777


Q ss_pred             HHcCccccccc---c--cccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEe
Q 009464          426 TVGGHALSLAD---L--ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV  500 (534)
Q Consensus       426 ~~~~~~~~~~~---~--~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii  500 (534)
                      ..+. ...+..   +  .++....+|++|.|+.-+.-   +..  ....+ ...+|..-.-.|.....-+.-+++|+.++
T Consensus       288 ~~g~-i~~y~~a~~i~~~ei~~~~~DIlvPcA~~n~i---~~~--na~~l-~ak~VvEgAN~p~t~eA~~iL~~~GI~~~  360 (440)
T 3aog_A          288 EFGG-VRGYPKAEPLPAADFWGLPVEFLVPAALEKQI---TEQ--NAWRI-RARIVAEGANGPTTPAADDILLEKGVLVV  360 (440)
T ss_dssp             HTSS-STTCTTSEECCHHHHTTCCCSEEEECSSSSCB---CTT--TGGGC-CCSEEECCSSSCBCHHHHHHHHHHTCEEE
T ss_pred             hcCC-cccCCCceEcCchhhhcCCCcEEEecCCcCcc---chh--hHHHc-CCcEEEecCccccCHHHHHHHHHCCCEEE
Confidence            6431 111110   0  11112368999999863321   111  12233 44788888877753334444567798877


Q ss_pred             ccH
Q 009464          501 SGL  503 (534)
Q Consensus       501 ~Gl  503 (534)
                      ++.
T Consensus       361 PD~  363 (440)
T 3aog_A          361 PDV  363 (440)
T ss_dssp             CHH
T ss_pred             ChH
Confidence            544

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.02  E-value=0.00088  Score=62.24  Aligned_cols=70  Identities=20%  Similarity=0.219  Sum_probs=50.1

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc------cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~~~-~~~~~divVn~t~  453 (534)
                      .+++++|+|+ ||+|++++..+...|++|++++|+.++.+.+ ++++... .+..+      +.+. ....+|++||+++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  116 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA  116 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence            5789999996 9999999999999999999999998887654 3444321 12111      1110 1235899999985

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=97.01  E-value=0.0006  Score=68.47  Aligned_cols=101  Identities=17%  Similarity=0.109  Sum_probs=67.6

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      .+.|+++.|+|.|.+|+++|..|...|++|++++|+.+  +.     +.  ....++.+ ....+|+|+.++|....  +
T Consensus       121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~-----~~--~~~~~l~e-ll~~aDvV~l~~P~~~~--t  188 (303)
T 1qp8_A          121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG-----PW--RFTNSLEE-ALREARAAVCALPLNKH--T  188 (303)
T ss_dssp             CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS-----SS--CCBSCSHH-HHTTCSEEEECCCCSTT--T
T ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc-----Cc--ccCCCHHH-HHhhCCEEEEeCcCchH--H
Confidence            57899999999999999999999999999999999875  11     11  12223333 34568999999987532  1


Q ss_pred             CCCCCCc---cccCCCCEEEEEecCCC-hh-HHHHHHHH
Q 009464          461 DETPIPK---HALGHYALVFDAVYTPK-IT-RLLREAEE  494 (534)
Q Consensus       461 ~~~~i~~---~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~  494 (534)
                       ...+..   ..++++.+++|+.-.+. .+ .+.+..++
T Consensus       189 -~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~  226 (303)
T 1qp8_A          189 -RGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKE  226 (303)
T ss_dssp             -TTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred             -HHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHh
Confidence             112332   24567788888876543 33 34444444

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=97.01  E-value=0.0014  Score=65.48  Aligned_cols=43  Identities=23%  Similarity=0.264  Sum_probs=39.5

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      +.|++.|+|+|-||.++|..|+ .|++|+++||+.++++++.+.
T Consensus        11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~   53 (293)
T 1zej_A           11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ   53 (293)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH
Confidence            4689999999999999999999 999999999999999888776

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=97.01  E-value=0.00051  Score=70.79  Aligned_cols=188  Identities=19%  Similarity=0.248  Sum_probs=105.9

Q ss_pred             cCCCeEEEecccccHHHHHHHhc--CCCCCEEEeccchHHHHhhcccccCHHHHHhcCeeEEEEeccCCeEEEEeccHHH
Q 009464          282 VGFNGVFVHLLVDDIAKFFQTYS--SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG  359 (534)
Q Consensus       282 ~gl~~~y~~~~~~~~~~~~~~~~--~~~~~G~~VT~P~K~~v~~~ld~~~~~A~~iGAvNTi~~~~~~g~l~G~NTD~~G  359 (534)
                      -|+|..=+.+++.+.++|++.++  .+.|.|++.--=-..+.++.++++-+.                +.+-=+|-|..|
T Consensus       103 agid~~pi~Ldv~~~dEfv~~v~~~~p~F~~I~lED~~~p~~f~il~~~r~~----------------~~ipvf~DDiqG  166 (398)
T 2a9f_A          103 AGVDAIPIVLDTKDTEEIISIVKALAPTFGGINLEDISAPRCFEIEQRLIKE----------------CHIPVFHDDQHG  166 (398)
T ss_dssp             SSCEEEEEECCCCCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHH----------------CSSCEEEHHHHH
T ss_pred             cCCceeeeEeCCCCHHHHHHHHHHcCCceeEeccccCCChHHHHHHHHhhhc----------------CCcceecchhhh
Confidence            46775555666677888877664  478999887642233444444443322                112334445443


Q ss_pred             H----HHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH-------HHHHHHHHHH
Q 009464          360 A----ISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY-------DRARELAETV  427 (534)
Q Consensus       360 ~----~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~-------~~a~~la~~~  427 (534)
                      -    +.++-..++ .      .+..++.-+++|+|||.+|.+++..+...|+ +|++++|+-       ++...+.+.+
T Consensus       167 Ta~V~lAall~al~-l------~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~f  239 (398)
T 2a9f_A          167 TAIVVLAAIFNSLK-L------LKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDI  239 (398)
T ss_dssp             HHHHHHHHHHHHHH-T------TTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CH
T ss_pred             HHHHHHHHHHHHHH-H------hCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHH
Confidence            2    112222122 1      1346778899999999999999999999999 999999862       2222222222


Q ss_pred             cCc---ccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccc---cCCCCEEEEEecCCC--hhHHHHHHHHCCC-e
Q 009464          428 GGH---ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA---LGHYALVFDAVYTPK--ITRLLREAEESGA-T  498 (534)
Q Consensus       428 ~~~---~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~---l~~~~~v~Dv~y~p~--~T~ll~~A~~~G~-~  498 (534)
                      ...   ......+.+ ....+|++|-+...+        .+.++.   +.++.++|++. ||.  .||  ..|.+.|. .
T Consensus       240 a~~~~~~~~~~~L~e-av~~ADV~IG~Sapg--------l~T~EmVk~Ma~~pIIfals-NPt~E~~p--e~a~~~g~~i  307 (398)
T 2a9f_A          240 AKVTNREFKSGTLED-ALEGADIFIGVSAPG--------VLKAEWISKMAARPVIFAMA-NPIPEIYP--DEALEAGAYI  307 (398)
T ss_dssp             HHHHSCTTCCCSCSH-HHHTTCSEEECCSTT--------CCCHHHHHTSCSSCEEEECC-SSSCSSCH--HHHHTTTCSE
T ss_pred             hhccCcccchhhHHH-HhccCCEEEecCCCC--------CCCHHHHHhhCCCCEEEECC-CCCccCCH--HHHHHhCCeE
Confidence            111   001122333 334579999765322        133333   45778999998 444  454  44555554 3


Q ss_pred             EeccHH
Q 009464          499 IVSGLE  504 (534)
Q Consensus       499 ii~Gl~  504 (534)
                      +-.|.+
T Consensus       308 ~atGrs  313 (398)
T 2a9f_A          308 VGTGRS  313 (398)
T ss_dssp             EEESCT
T ss_pred             EEeCCC
Confidence            345543

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=97.01  E-value=4.4e-05  Score=77.21  Aligned_cols=106  Identities=17%  Similarity=0.047  Sum_probs=65.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+.++.+.+.     ......++.+ .+.++|+|+.++|....  
T Consensus       135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----~~~~~~~l~e-ll~~aDiV~l~~Plt~~--  206 (315)
T 3pp8_A          135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVE-----SYVGREELRA-FLNQTRVLINLLPNTAQ--  206 (315)
T ss_dssp             CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCE-----EEESHHHHHH-HHHTCSEEEECCCCCGG--
T ss_pred             CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhh-----hhcccCCHHH-HHhhCCEEEEecCCchh--
Confidence            457899999999999999999999999999999999875421110     0001122333 23457888888876421  


Q ss_pred             CCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHH
Q 009464          460 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEE  494 (534)
Q Consensus       460 ~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~  494 (534)
                      + ...+...   .++++.+++|+.-.+. .+.-+..|.+
T Consensus       207 t-~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~  244 (315)
T 3pp8_A          207 T-VGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALD  244 (315)
T ss_dssp             G-TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred             h-hhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHH
Confidence            1 1123322   3456667777765433 3444444433

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=97.01  E-value=0.00041  Score=70.86  Aligned_cols=106  Identities=21%  Similarity=0.205  Sum_probs=71.3

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      +..+.||++.|+|.|.+|+++|..|...|++|+.++|+.++.      ... ...+.++.+ .+..+|+|+.++|.... 
T Consensus       143 ~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~------~~~-~~~~~~l~e-ll~~aDvV~l~~Plt~~-  213 (343)
T 2yq5_A          143 SNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE------FEP-FLTYTDFDT-VLKEADIVSLHTPLFPS-  213 (343)
T ss_dssp             BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG------GTT-TCEECCHHH-HHHHCSEEEECCCCCTT-
T ss_pred             ccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh------hhc-cccccCHHH-HHhcCCEEEEcCCCCHH-
Confidence            356789999999999999999999999999999999987541      111 111123333 23468999999987522 


Q ss_pred             CCCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHC
Q 009464          459 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEES  495 (534)
Q Consensus       459 ~~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~  495 (534)
                        ....+...   .++++.+++|+.-.+. .+.-+..|.+.
T Consensus       214 --t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~  252 (343)
T 2yq5_A          214 --TENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQD  252 (343)
T ss_dssp             --TTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred             --HHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHc
Confidence              11223333   3578889999986644 44444444443

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.00  E-value=0.00048  Score=73.56  Aligned_cols=113  Identities=20%  Similarity=0.221  Sum_probs=76.0

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH--cCcc---cccccccccCCCCceEEEEcCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV--GGHA---LSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~--~~~~---~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      +++.|+|.|-||.+++..|++.|++|+++||+.++++++.+.-  +...   .+.+++.+ .+..+|+||-++|.+..  
T Consensus         5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~-~l~~aDvVil~Vp~~~~--   81 (484)
T 4gwg_A            5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVS-KLKKPRRIILLVKAGQA--   81 (484)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH-TBCSSCEEEECSCSSHH--
T ss_pred             CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHh-hccCCCEEEEecCChHH--
Confidence            5799999999999999999999999999999999999887652  1111   12333322 23468999998876521  


Q ss_pred             CCCCCCC--ccccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEec
Q 009464          460 VDETPIP--KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  501 (534)
Q Consensus       460 ~~~~~i~--~~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii~  501 (534)
                      .+. -+.  ...++++.+++|..-... .| .+.+..+++|+.+++
T Consensus        82 v~~-vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd  126 (484)
T 4gwg_A           82 VDD-FIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVG  126 (484)
T ss_dssp             HHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHH-HHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhcccccc
Confidence            000 010  124567889999986543 33 344556677876543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.00  E-value=0.00035  Score=69.74  Aligned_cols=109  Identities=17%  Similarity=0.125  Sum_probs=72.1

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  463 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~  463 (534)
                      .+++.|+|.|.+|.+++..|++.|++|++++|+.++++++.+. +..  ...++.+ ... +|+||-++|....  ... 
T Consensus        15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~--~~~~~~~-~~~-aDvvi~~vp~~~~--~~~-   86 (296)
T 3qha_A           15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-GAT--LADSVAD-VAA-ADLIHITVLDDAQ--VRE-   86 (296)
T ss_dssp             CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-TCE--ECSSHHH-HTT-SSEEEECCSSHHH--HHH-
T ss_pred             CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCE--EcCCHHH-HHh-CCEEEEECCChHH--HHH-
Confidence            3579999999999999999999999999999999998887653 221  1223333 234 8999998874210  000 


Q ss_pred             CCC--ccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEe
Q 009464          464 PIP--KHALGHYALVFDAVYTPKIT--RLLREAEESGATIV  500 (534)
Q Consensus       464 ~i~--~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii  500 (534)
                      -+.  ...++++.+++|..-.+..+  .+.+..++.|..++
T Consensus        87 v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~  127 (296)
T 3qha_A           87 VVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIV  127 (296)
T ss_dssp             HHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEE
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEE
Confidence            010  12356778999998664433  33344455676554

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.99  E-value=0.00096  Score=67.45  Aligned_cols=74  Identities=14%  Similarity=0.086  Sum_probs=50.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH----HHHHHHHHH-----cC-cc--cccc---cccccCCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD----RARELAETV-----GG-HA--LSLA---DLENFNPED  444 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~----~a~~la~~~-----~~-~~--~~~~---~~~~~~~~~  444 (534)
                      .++++++||+|| |.+|++++..|.+.|++|+++.|+..    ..+.+...+     .. ..  .++.   ++.+ ...+
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~  100 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQ-VMKG  100 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHH-HTTT
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHH-HhcC
Confidence            346789999998 99999999999999999999999543    333332211     11 11  1222   2223 3457


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      +|+||++++..
T Consensus       101 ~d~Vih~A~~~  111 (351)
T 3ruf_A          101 VDHVLHQAALG  111 (351)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            89999999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.99  E-value=0.0015  Score=65.97  Aligned_cols=70  Identities=26%  Similarity=0.332  Sum_probs=52.8

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-cccccc---cc----ccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLAD---LE----NFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-~~~~~~---~~----~~~~~~~divVn~t~  453 (534)
                      .+++++|+|+ ||+|++++..++..|++|++++|+.++.+.+ ++++.. ..+..+   +.    +...+.+|++||+++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  223 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  223 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence            5789999998 9999999999999999999999999888776 666543 222221   11    111246899999987

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=96.98  E-value=0.0012  Score=79.85  Aligned_cols=77  Identities=21%  Similarity=0.300  Sum_probs=53.7

Q ss_pred             cccCCcEEEEEcC-ch-hHHHHHHHHHHCCCeEEEEe-CCHHHHHHHH----HHHc---Ccc----ccccc---cccc--
Q 009464          380 SALAGKLFVVIGA-GG-AGKALAYGAKAKGARVVIAN-RTYDRARELA----ETVG---GHA----LSLAD---LENF--  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG-~graia~~L~~~G~~v~i~~-R~~~~a~~la----~~~~---~~~----~~~~~---~~~~--  440 (534)
                      ..+++|++||+|+ || +|++++..|++.|++|++++ |+.+++++++    +++.   ...    +++.+   +.++  
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            5688999999999 67 99999999999999999984 7666655444    3432   111    12221   1110  


Q ss_pred             ----C---CC-CceEEEEcCCCCC
Q 009464          441 ----N---PE-DGMILANTTSIGM  456 (534)
Q Consensus       441 ----~---~~-~~divVn~t~~g~  456 (534)
                          .   .+ ..|+|||++++..
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~  751 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPE  751 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCC
T ss_pred             HHHHhhcccCCCCcEEEeCccccc
Confidence                2   44 6899999999764

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.97  E-value=0.00072  Score=70.24  Aligned_cols=110  Identities=14%  Similarity=0.033  Sum_probs=71.5

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+.++.+ .+..++....  .++.+ .+..+|+|+.++|....  
T Consensus       187 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-~~~~~G~~~~--~~l~e-ll~~aDvV~l~~Plt~~--  260 (393)
T 2nac_A          187 YDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPES-VEKELNLTWH--ATRED-MYPVCDVVTLNCPLHPE--  260 (393)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHH-HHHHHTCEEC--SSHHH-HGGGCSEEEECSCCCTT--
T ss_pred             ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchh-hHhhcCceec--CCHHH-HHhcCCEEEEecCCchH--
Confidence            468899999999999999999999999999999999865432 3334443321  12223 23468999999986521  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCC
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESG  496 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G  496 (534)
                      + ...+..   ..++++.+++|+.-.+. .+.-+.+|.+.|
T Consensus       261 t-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g  300 (393)
T 2nac_A          261 T-EHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESG  300 (393)
T ss_dssp             T-TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred             H-HHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcC
Confidence            1 112332   23566778888875533 343444444443

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=96.97  E-value=0.00013  Score=71.99  Aligned_cols=67  Identities=19%  Similarity=0.158  Sum_probs=45.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccc---cccccCCC-CceEEEEcCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA---DLENFNPE-DGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~---~~~~~~~~-~~divVn~t~~  454 (534)
                      +++++|+|+|.+|++++..|.+.|++|+++.|+.++..   ..+.....++.   .+.+ ... .+|+||++++.
T Consensus         3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~Dl~d~~~~~~-~~~~~~d~vih~a~~   73 (286)
T 3gpi_A            3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMP---AGVQTLIADVTRPDTLAS-IVHLRPEILVYCVAA   73 (286)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCC---TTCCEEECCTTCGGGCTT-GGGGCCSEEEECHHH
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccc---cCCceEEccCCChHHHHH-hhcCCCCEEEEeCCC
Confidence            46899999999999999999999999999999876521   11100011222   2222 222 38999998864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.97  E-value=0.00063  Score=68.51  Aligned_cols=71  Identities=17%  Similarity=0.162  Sum_probs=46.6

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH--HHcC-----cc--ccccc---ccccCCCCceEEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE--TVGG-----HA--LSLAD---LENFNPEDGMILA  449 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~--~~~~-----~~--~~~~~---~~~~~~~~~divV  449 (534)
                      ++|++||+|+ |++|++++..|.+.|++|+++.|+.+..+++..  .+..     ..  .++.+   +.+ ....+|+||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDE-AIKGCTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHH-HHTTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHH-HHcCCCEEE
Confidence            5789999997 999999999999999999988898764332221  1111     11  12222   222 234679999


Q ss_pred             EcCCC
Q 009464          450 NTTSI  454 (534)
Q Consensus       450 n~t~~  454 (534)
                      |+++.
T Consensus        83 h~A~~   87 (337)
T 2c29_D           83 HVATP   87 (337)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            98864

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.96  E-value=0.00077  Score=65.60  Aligned_cols=66  Identities=17%  Similarity=0.222  Sum_probs=51.1

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      .++.|+|+|.+|++++..|.+.|.+|.+++|+.++++++++.++...  ..+..+ ....+|+||.+++
T Consensus         4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~--~~~~~~-~~~~~D~Vi~~v~   69 (259)
T 2ahr_A            4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY--AMSHQD-LIDQVDLVILGIK   69 (259)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB--CSSHHH-HHHTCSEEEECSC
T ss_pred             cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe--eCCHHH-HHhcCCEEEEEeC
Confidence            47999999999999999999999999999999999999988765432  112222 1224688888876

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.95  E-value=0.0011  Score=66.23  Aligned_cols=39  Identities=36%  Similarity=0.405  Sum_probs=36.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  423 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~l  423 (534)
                      +++.|+|+|.||.++|..|++.|++|++++|+.++++..
T Consensus        16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            689999999999999999999999999999999887764

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.94  E-value=0.0012  Score=65.92  Aligned_cols=48  Identities=15%  Similarity=0.266  Sum_probs=41.2

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH------------------HHHHHHHHHHc
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY------------------DRARELAETVG  428 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~------------------~~a~~la~~~~  428 (534)
                      .+++++|+|+|+||.|..++..|+..|+ +++|++++.                  .|++.+++.+.
T Consensus        33 kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~   99 (292)
T 3h8v_A           33 KIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLR   99 (292)
T ss_dssp             GGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHH
T ss_pred             HHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHH
Confidence            4567899999999999999999999999 999999876                  67777766653

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=96.94  E-value=0.00023  Score=72.39  Aligned_cols=116  Identities=17%  Similarity=0.135  Sum_probs=75.6

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++.  + +..    ....++.+ .+..+|+|+.++|....  
T Consensus       142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~----~~~~~l~e-ll~~aDvV~~~~p~t~~--  211 (331)
T 1xdw_A          142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDY----CTQVSLDE-VLEKSDIITIHAPYIKE--  211 (331)
T ss_dssp             CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTT----CEECCHHH-HHHHCSEEEECCCCCTT--
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhc----cccCCHHH-HHhhCCEEEEecCCchH--
Confidence            45789999999999999999999999999999999987643  1 111    11223333 23457999999886532  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                      + ...+..   ..++++.+++|+.-.+. .+.-+..|.+.|...--|++.+
T Consensus       212 t-~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~  261 (331)
T 1xdw_A          212 N-GAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVL  261 (331)
T ss_dssp             T-CCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred             H-HHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecC
Confidence            1 112332   34677889999986543 4555555555543333444444

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.92  E-value=0.00096  Score=67.64  Aligned_cols=74  Identities=15%  Similarity=0.139  Sum_probs=51.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH----HHHHHHHHHHc----Cc--c--ccccc---ccccCCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY----DRARELAETVG----GH--A--LSLAD---LENFNPED  444 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~----~~a~~la~~~~----~~--~--~~~~~---~~~~~~~~  444 (534)
                      .+.+++++|+|+ |++|++++..|.+.|++|++++|+.    ++.+++.+.+.    ..  .  .++.+   +.+ ....
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~  102 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN-ACAG  102 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH-HHTT
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHH-HhcC
Confidence            456789999999 9999999999999999999999964    34455544321    11  1  12222   222 2347


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      +|+|||+++..
T Consensus       103 ~d~vih~A~~~  113 (352)
T 1sb8_A          103 VDYVLHQAALG  113 (352)
T ss_dssp             CSEEEECCSCC
T ss_pred             CCEEEECCccc
Confidence            89999999864

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.92  E-value=0.0023  Score=64.93  Aligned_cols=37  Identities=16%  Similarity=0.287  Sum_probs=33.8

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  417 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~  417 (534)
                      .+++++|+|+|+||+|.+++..|+..|+ +|+|++++.
T Consensus        31 kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           31 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            4678999999999999999999999999 999998754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.91  E-value=0.00099  Score=66.13  Aligned_cols=71  Identities=20%  Similarity=0.254  Sum_probs=49.7

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHH--cCcc--ccccc---ccccCCCCceEEEE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-----YDRARELAETV--GGHA--LSLAD---LENFNPEDGMILAN  450 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-----~~~a~~la~~~--~~~~--~~~~~---~~~~~~~~~divVn  450 (534)
                      .++++|+|| |++|++++..|.+.|++|+++.|+     .++++.+...-  +.+.  .++.+   +.+ .+.++|+||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~-~~~~~d~vi~   82 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVD-ALKQVDVVIS   82 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHH-HHTTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHH-HHhCCCEEEE
Confidence            367999998 999999999999999999999998     55555443211  1111  12222   223 3456899999


Q ss_pred             cCCCC
Q 009464          451 TTSIG  455 (534)
Q Consensus       451 ~t~~g  455 (534)
                      +++..
T Consensus        83 ~a~~~   87 (313)
T 1qyd_A           83 ALAGG   87 (313)
T ss_dssp             CCCCS
T ss_pred             CCccc
Confidence            98754

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.91  E-value=0.00072  Score=65.48  Aligned_cols=45  Identities=22%  Similarity=0.313  Sum_probs=41.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHHHHcC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA----RVVIANRTYDRARELAETVGG  429 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~----~v~i~~R~~~~a~~la~~~~~  429 (534)
                      +++.|+|+|.+|.+++..|.+.|.    +|++++|+.++++++++.++.
T Consensus         3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~   51 (247)
T 3gt0_A            3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGL   51 (247)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCC
T ss_pred             CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCC
Confidence            478999999999999999999998    999999999999999887754

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.91  E-value=0.0021  Score=63.15  Aligned_cols=66  Identities=20%  Similarity=0.141  Sum_probs=49.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      ++.|+|+|.+|.+++..|.+.|++|++++|+.++++.+. +.+.......++.+ . ..+|+||.+++.
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~-~~~D~vi~av~~   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQDLSL-L-QTAKIIFLCTPI   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESCGGG-G-TTCSEEEECSCH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCCccccCCHHH-h-CCCCEEEEECCH
Confidence            589999999999999999999999999999999988765 33321111223333 2 467888888764

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.90  E-value=0.022  Score=59.41  Aligned_cols=132  Identities=23%  Similarity=0.201  Sum_probs=86.4

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEE-EEeC----------CHHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~-i~~R----------~~~~a~~la~  425 (534)
                      +.|.+.+++..++.       .+.++++|+++|.|.|.+|+.++..|.+.|++|+ |.++          +.+.+.++.+
T Consensus       198 g~Gv~~~~~~~~~~-------~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~  270 (419)
T 3aoe_E          198 GLGALLVLEALAKR-------RGLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYE  270 (419)
T ss_dssp             HHHHHHHHHHHHHH-------HTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh-------cCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHH
Confidence            56777777665543       1357889999999999999999999999999877 8888          8888888887


Q ss_pred             HHcCccc--ccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccH
Q 009464          426 TVGGHAL--SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGL  503 (534)
Q Consensus       426 ~~~~~~~--~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl  503 (534)
                      +.+. ..  .+.. .++....+|+++.|+.-+.-   +  .-....+ ...+|.+-.-.|.....-+.-+++|+.++++.
T Consensus       271 ~~g~-v~~~~~~~-~e~~~~~~DVliP~A~~n~i---~--~~~A~~l-~ak~V~EgAN~p~t~~A~~~L~~~Gi~~~PD~  342 (419)
T 3aoe_E          271 ATGS-LPRLDLAP-EEVFGLEAEVLVLAAREGAL---D--GDRARQV-QAQAVVEVANFGLNPEAEAYLLGKGALVVPDL  342 (419)
T ss_dssp             HHSS-CSCCCBCT-TTGGGSSCSEEEECSCTTCB---C--HHHHTTC-CCSEEEECSTTCBCHHHHHHHHHHTCEEECHH
T ss_pred             hhCC-cceeeccc-hhhhccCceEEEeccccccc---c--cchHhhC-CceEEEECCCCcCCHHHHHHHHHCCCEEECHH
Confidence            7541 11  1110 11111368999998742210   1  1111233 44688898877753334444567788777543

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.90  E-value=0.002  Score=65.19  Aligned_cols=71  Identities=25%  Similarity=0.346  Sum_probs=54.5

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc------ccccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~~~~~~~~divVn~t~  453 (534)
                      .|++++|+|+ ||+|.+++..++..|++|+++.|+.++.+.++++++... .+..+      +.+.....+|+++|+++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  227 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG  227 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence            5789999999 999999999999999999999999999888767776532 22111      11112246899999987

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.90  E-value=0.0025  Score=63.34  Aligned_cols=42  Identities=17%  Similarity=0.256  Sum_probs=38.7

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      .++.|+|+|.+|.+++..|++.|.+|++++|+.++.+.+.+.
T Consensus         4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~   45 (316)
T 2ew2_A            4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN   45 (316)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC
Confidence            479999999999999999999999999999999998888765

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=96.90  E-value=0.0006  Score=80.45  Aligned_cols=49  Identities=22%  Similarity=0.428  Sum_probs=41.1

Q ss_pred             ccccCCcEEEEEcC-ch-hHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHH
Q 009464          379 SSALAGKLFVVIGA-GG-AGKALAYGAKAKGARVVIA-NRTYDRARELAETV  427 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG-~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~  427 (534)
                      ...+++|++||+|+ || +|+++|..|++.|++|+++ +|+.++++++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL  522 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSI  522 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHT
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHH
Confidence            35678999999999 66 9999999999999999887 68877766666655

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.89  E-value=0.00085  Score=66.49  Aligned_cols=46  Identities=26%  Similarity=0.452  Sum_probs=41.5

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHcC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA---RVVIANRTYDRARELAETVGG  429 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~---~v~i~~R~~~~a~~la~~~~~  429 (534)
                      .+++.|+|+|.||.+++..|.+.|.   +|++++|+.++++++.+.++.
T Consensus         3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi   51 (280)
T 3tri_A            3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGV   51 (280)
T ss_dssp             CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCC
T ss_pred             CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCC
Confidence            3579999999999999999999998   899999999999999887653

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.89  E-value=0.0019  Score=63.50  Aligned_cols=69  Identities=9%  Similarity=0.139  Sum_probs=50.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcccccccccccCCC-CceEEEEcCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPE-DGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~-~~divVn~t~~g  455 (534)
                      +++.|+|+|.+|.+++..|.+.|.  +|++++|+.++.+.+. +.+.......+..+ ... .+|+||.|+|..
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~aDvVilavp~~   73 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAK-VEDFSPDFVMLSSPVR   73 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGGG-GGGTCCSEEEECSCHH
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HCCCcccccCCHHH-HhcCCCCEEEEcCCHH
Confidence            478999999999999999999998  9999999999887654 33322101223333 334 679999888743

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=96.87  E-value=0.00069  Score=67.50  Aligned_cols=35  Identities=20%  Similarity=0.132  Sum_probs=30.7

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC-CHH
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYD  418 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R-~~~  418 (534)
                      ||++||+|| |++|++++..|.+.|++|+++.| +.+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   37 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPE   37 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC--
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCcc
Confidence            478999998 99999999999999999999888 653

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=96.87  E-value=0.0019  Score=68.99  Aligned_cols=91  Identities=22%  Similarity=0.193  Sum_probs=64.2

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      .+.|++++|+|+|.+|+.++..+...|++|++++|+.++++.. ...+....++++    ....+|+||.+++...    
T Consensus       271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A-~~~Ga~~~~l~e----~l~~aDvVi~atgt~~----  341 (494)
T 3ce6_A          271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQA-MMEGFDVVTVEE----AIGDADIVVTATGNKD----  341 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEECCHHH----HGGGCSEEEECSSSSC----
T ss_pred             CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCEEecHHH----HHhCCCEEEECCCCHH----
Confidence            4679999999999999999999999999999999999887553 344544333332    2346899999875321    


Q ss_pred             CCCCCCc---cccCCCCEEEEEecCC
Q 009464          461 DETPIPK---HALGHYALVFDAVYTP  483 (534)
Q Consensus       461 ~~~~i~~---~~l~~~~~v~Dv~y~p  483 (534)
                         .+..   ..++++.+++++...+
T Consensus       342 ---~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          342 ---IIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             ---SBCHHHHHHSCTTCEEEECSSSG
T ss_pred             ---HHHHHHHHhcCCCcEEEEeCCCC
Confidence               1221   2356667777776543

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.87  E-value=0.0011  Score=66.94  Aligned_cols=114  Identities=17%  Similarity=0.160  Sum_probs=74.0

Q ss_pred             EEEEEcCchhHHHH-HHHHHHCCCeE-EEEeCCHHHHHHHHHHHcCc--ccccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKAL-AYGAKAKGARV-VIANRTYDRARELAETVGGH--ALSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       386 ~vlVlGaGG~grai-a~~L~~~G~~v-~i~~R~~~~a~~la~~~~~~--~~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      ++.|+|+|++|+.. +..|.+.|+++ .+++|+.+++++++++++..  ..+++++-+  ...+|+|+.+||.....   
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~--~~~~D~V~i~tp~~~h~---   76 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVG--DPDVDAVYVSTTNELHR---   76 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHT--CTTCCEEEECSCGGGHH---
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhc--CCCCCEEEEeCChhHhH---
Confidence            58999999999998 78888877765 58999999999999987642  123333221  23589999999854321   


Q ss_pred             CCCCCccccCCCCEEEEEecCCC------hhHHHHHHHHCCCeEeccHHHHHH
Q 009464          462 ETPIPKHALGHYALVFDAVYTPK------ITRLLREAEESGATIVSGLEMFIG  508 (534)
Q Consensus       462 ~~~i~~~~l~~~~~v~Dv~y~p~------~T~ll~~A~~~G~~ii~Gl~ml~~  508 (534)
                        ++....++.+..|+  +-+|.      ...+.+.|++.|..+..|..+-..
T Consensus        77 --~~~~~al~~Gk~v~--~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~  125 (332)
T 2glx_A           77 --EQTLAAIRAGKHVL--CEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNA  125 (332)
T ss_dssp             --HHHHHHHHTTCEEE--ECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGS
T ss_pred             --HHHHHHHHCCCeEE--EeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcC
Confidence              12223344444332  23443      245777788888877666544433

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.85  E-value=0.00039  Score=69.91  Aligned_cols=37  Identities=32%  Similarity=0.325  Sum_probs=33.4

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      ++++++|+|+ |++|++++..|.+.|++|++++|+.++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   39 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGE   39 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            4689999999 999999999999999999999998754

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=96.85  E-value=0.00056  Score=73.46  Aligned_cols=113  Identities=20%  Similarity=0.190  Sum_probs=73.6

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-HHc-Ccc---cccccccccCCCCceEEEEcCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE-TVG-GHA---LSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~-~~~-~~~---~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .+++.|+|+|.||.+++..|++.|.+|+++||+.++++++.+ ... ...   .+.+++.+ .+..+|+||-+++.+.. 
T Consensus        10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~-~l~~aDvVil~Vp~~~~-   87 (497)
T 2p4q_A           10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFIS-KLKRPRKVMLLVKAGAP-   87 (497)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHH-TSCSSCEEEECCCSSHH-
T ss_pred             CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHh-cCCCCCEEEEEcCChHH-
Confidence            357999999999999999999999999999999999998876 321 011   12222222 23358999999876411 


Q ss_pred             CCCCCCCC--ccccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEe
Q 009464          459 KVDETPIP--KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIV  500 (534)
Q Consensus       459 ~~~~~~i~--~~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii  500 (534)
                       .+. -+.  ...++++.+++|+.-... .| .+.+..++.|..++
T Consensus        88 -v~~-vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v  131 (497)
T 2p4q_A           88 -VDA-LINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFV  131 (497)
T ss_dssp             -HHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             -HHH-HHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCcee
Confidence             000 010  123566789999875433 23 34445566776654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.85  E-value=0.0014  Score=70.88  Aligned_cols=74  Identities=16%  Similarity=0.118  Sum_probs=50.7

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCe-EEEE-eCC-------------HHHHHHHHHHHc---Ccc----ccccc---
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGAR-VVIA-NRT-------------YDRARELAETVG---GHA----LSLAD---  436 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~-v~i~-~R~-------------~~~a~~la~~~~---~~~----~~~~~---  436 (534)
                      .++++||+|+ ||+|++++..|++.|++ |+++ +|+             .++++++.+++.   .+.    +++.+   
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5789999999 99999999999999995 8888 998             455566665552   221    22222   


Q ss_pred             cc----cc-CCCCceEEEEcCCCCC
Q 009464          437 LE----NF-NPEDGMILANTTSIGM  456 (534)
Q Consensus       437 ~~----~~-~~~~~divVn~t~~g~  456 (534)
                      +.    .. ..+..|+|||++++..
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~  354 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVD  354 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCC
Confidence            11    10 2356899999998764

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=96.85  E-value=0.00032  Score=71.44  Aligned_cols=102  Identities=20%  Similarity=0.182  Sum_probs=66.7

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++.+      +..  ...++.+ .+..+|+|+.++|..... 
T Consensus       160 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~------g~~--~~~~l~e-ll~~aDvVil~vP~~~~t-  229 (333)
T 3ba1_A          160 TKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT------NYT--YYGSVVE-LASNSDILVVACPLTPET-  229 (333)
T ss_dssp             CCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC------CSE--EESCHHH-HHHTCSEEEECSCCCGGG-
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc------Cce--ecCCHHH-HHhcCCEEEEecCCChHH-
Confidence            467899999999999999999999999999999999876432      111  1223333 234679999998864211 


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAE  493 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~  493 (534)
                        ...+..   ..++++.+++|+.-.+. .+.-+..+.
T Consensus       230 --~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL  265 (333)
T 3ba1_A          230 --THIINREVIDALGPKGVLINIGRGPHVDEPELVSAL  265 (333)
T ss_dssp             --TTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHH
T ss_pred             --HHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHH
Confidence              111222   23567778888775533 333334433

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=96.84  E-value=0.00032  Score=71.44  Aligned_cols=118  Identities=16%  Similarity=0.092  Sum_probs=79.4

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++.  + +.. .   .+.++.+ .+..+|+|+.++|....  
T Consensus       141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~---~~~~l~e-ll~~aDvV~~~~P~~~~--  210 (333)
T 1dxy_A          141 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPD-F---DYVSLED-LFKQSDVIDLHVPGIEQ--  210 (333)
T ss_dssp             CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTT-C---EECCHHH-HHHHCSEEEECCCCCGG--
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhc-c---ccCCHHH-HHhcCCEEEEcCCCchh--
Confidence            46789999999999999999999999999999999987542  1 111 1   1222333 23468999999986521  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMFIG  508 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml~~  508 (534)
                       ....+..   ..++++.+++|+.-.+. .+.-+..|.+.|...--|++.+-.
T Consensus       211 -t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~  262 (333)
T 1dxy_A          211 -NTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEY  262 (333)
T ss_dssp             -GTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred             -HHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCC
Confidence             1112332   34677889999987644 566666676666444456665543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.83  E-value=0.0022  Score=63.46  Aligned_cols=41  Identities=15%  Similarity=0.232  Sum_probs=38.1

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE  425 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~  425 (534)
                      .++.|+|+ |.+|.+++..|.+.|++|++++|+.++++.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            58999999 999999999999999999999999999888765

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.82  E-value=0.00021  Score=72.33  Aligned_cols=69  Identities=19%  Similarity=0.217  Sum_probs=45.7

Q ss_pred             ccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---ccccCCCCceEEEEcC
Q 009464          379 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTT  452 (534)
Q Consensus       379 ~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~~~~~~divVn~t  452 (534)
                      ..+.++|+|||+|+ |++|++++..|.+.|++|++++|+.++       -+...  .++.+   +.+ .+..+|+||+++
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~-~~~~~d~vih~A   85 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSD-AIMGVSAVLHLG   85 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHH-HHTTCSEEEECC
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHH-HHhCCCEEEECC
Confidence            34567899999999 999999999999999999999998654       11111  12222   222 234789999998


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus        86 ~~~   88 (347)
T 4id9_A           86 AFM   88 (347)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            754

>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}

Probab=96.82  E-value=0.00057  Score=70.70  Aligned_cols=95  Identities=18%  Similarity=0.239  Sum_probs=61.4

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC-
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP-  458 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~-  458 (534)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.+..     ..+..   ..++.+ ....+|+|+.++|..... 
T Consensus       112 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-----~~g~~---~~~l~e-ll~~aDvV~l~~Plt~~g~  182 (380)
T 2o4c_A          112 ADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR-----EPDGE---FVSLER-LLAEADVISLHTPLNRDGE  182 (380)
T ss_dssp             CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH-----STTSC---CCCHHH-HHHHCSEEEECCCCCSSSS
T ss_pred             cccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh-----ccCcc---cCCHHH-HHHhCCEEEEeccCccccc
Confidence            45789999999999999999999999999999999876532     11111   222322 233579999998875320 


Q ss_pred             CCCCCCCCc---cccCCCCEEEEEecCC
Q 009464          459 KVDETPIPK---HALGHYALVFDAVYTP  483 (534)
Q Consensus       459 ~~~~~~i~~---~~l~~~~~v~Dv~y~p  483 (534)
                      ......+..   ..++++.+++|+.-.+
T Consensus       183 ~~T~~li~~~~l~~mk~gailIN~sRG~  210 (380)
T 2o4c_A          183 HPTRHLLDEPRLAALRPGTWLVNASRGA  210 (380)
T ss_dssp             SCCTTSBCHHHHHTSCTTEEEEECSCGG
T ss_pred             cchhhhcCHHHHhhCCCCcEEEECCCCc
Confidence            001112332   2345666777776543

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=96.81  E-value=0.0013  Score=64.74  Aligned_cols=107  Identities=20%  Similarity=0.163  Sum_probs=69.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++.|+|+|.+|.+++..|.+ |++|++++|+.++++.+.+. +.....   ..+ ....+|+||.|++....  ... -+
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-g~~~~~---~~~-~~~~~D~vi~~v~~~~~--~~~-v~   73 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-FGSEAV---PLE-RVAEARVIFTCLPTTRE--VYE-VA   73 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-HCCEEC---CGG-GGGGCSEEEECCSSHHH--HHH-HH
T ss_pred             eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-CCcccC---HHH-HHhCCCEEEEeCCChHH--HHH-HH
Confidence            58999999999999999999 99999999999998887765 222212   223 23468999999874320  000 01


Q ss_pred             C--ccccCCCCEEEEEecCCC-hh-HHHHHHHHCCCeEec
Q 009464          466 P--KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  501 (534)
Q Consensus       466 ~--~~~l~~~~~v~Dv~y~p~-~T-~ll~~A~~~G~~ii~  501 (534)
                      .  ...+.++.+++|+..... .+ .+.+...+.|..+++
T Consensus        74 ~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~  113 (289)
T 2cvz_A           74 EALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLD  113 (289)
T ss_dssp             HHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEE
T ss_pred             HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            0  123456678888865432 22 344444555665554

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.81  E-value=0.00031  Score=71.44  Aligned_cols=72  Identities=24%  Similarity=0.162  Sum_probs=50.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc--C--cc--ccccc---ccccCCC--CceEEE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--G--HA--LSLAD---LENFNPE--DGMILA  449 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~--~--~~--~~~~~---~~~~~~~--~~divV  449 (534)
                      +++++++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+.+.  .  ..  .++.+   +.+ ...  .+|+||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~~~d~vi   85 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLE-SIREFQPEIVF   85 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHH-HHHHHCCSEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHH-HHHhcCCCEEE
Confidence            46789999998 999999999999999999999998766554444331  1  11  12222   111 112  379999


Q ss_pred             EcCCC
Q 009464          450 NTTSI  454 (534)
Q Consensus       450 n~t~~  454 (534)
                      |+++.
T Consensus        86 h~A~~   90 (357)
T 1rkx_A           86 HMAAQ   90 (357)
T ss_dssp             ECCSC
T ss_pred             ECCCC
Confidence            99975

>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*

Probab=96.81  E-value=0.02  Score=53.76  Aligned_cols=125  Identities=17%  Similarity=0.140  Sum_probs=79.0

Q ss_pred             CCCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHH
Q 009464           20 RKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENE   99 (534)
Q Consensus        20 ~~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~   99 (534)
                      |+....|+.+|...|.+++.+.++.+.+.|+|+||+|.-.   .+..+.++.+.+..+.|+++-.     |+.  .++ +
T Consensus         3 ~~~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~---~~~~~~i~~i~~~~~~~l~vg~-----g~~--~~~-~   71 (212)
T 2v82_A            3 WQTKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNS---PQWEQSIPAIVDAYGDKALIGA-----GTV--LKP-E   71 (212)
T ss_dssp             CCSSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTS---TTHHHHHHHHHHHHTTTSEEEE-----ECC--CSH-H
T ss_pred             CCCCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHhCCCCeEEEe-----ccc--cCH-H
Confidence            3445667888999999999999999888999999998542   2223445555555567777621     222  122 2


Q ss_pred             HHHHHHHHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 009464          100 RVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (534)
Q Consensus       100 ~~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Ki  172 (534)
                         .++.+++.|+++|=+.-. ..++.+...   ..+.+++++-|    ||  +|+    .++...|+|++++
T Consensus        72 ---~i~~a~~~Gad~V~~~~~-~~~~~~~~~---~~g~~~~~g~~----t~--~e~----~~a~~~G~d~v~v  127 (212)
T 2v82_A           72 ---QVDALARMGCQLIVTPNI-HSEVIRRAV---GYGMTVCPGCA----TA--TEA----FTALEAGAQALKI  127 (212)
T ss_dssp             ---HHHHHHHTTCCEEECSSC-CHHHHHHHH---HTTCEEECEEC----SH--HHH----HHHHHTTCSEEEE
T ss_pred             ---HHHHHHHcCCCEEEeCCC-CHHHHHHHH---HcCCCEEeecC----CH--HHH----HHHHHCCCCEEEE
Confidence               456778889999853321 223333222   23566676644    32  343    3456789999996

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.81  E-value=0.002  Score=69.14  Aligned_cols=72  Identities=22%  Similarity=0.294  Sum_probs=50.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCH---HHHHHHHHHHc---Ccc----ccccc---cc----cc-CCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTY---DRARELAETVG---GHA----LSLAD---LE----NF-NPE  443 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~---~~a~~la~~~~---~~~----~~~~~---~~----~~-~~~  443 (534)
                      ++++||+|+ ||+|++++..|++.|+ +|++++|+.   +.++++.+++.   .+.    +++.+   +.    +. ...
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            589999999 8999999999999999 899999974   34555555542   221    22222   11    10 114


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      ..|+|||++++.
T Consensus       319 ~ld~vVh~AGv~  330 (496)
T 3mje_A          319 PLTAVFHSAGVA  330 (496)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCeEEEECCccc
Confidence            689999999875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.80  E-value=0.0019  Score=66.25  Aligned_cols=71  Identities=23%  Similarity=0.302  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccc---cccccCCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA---DLENFNPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~---~~~~~~~~~~divVn~t~~  454 (534)
                      .|++++|+|+|++|.+++..+...|++|++++++.++.+.+.++++.+. .+..   .+.+ ....+|++|++++.
T Consensus       187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~-~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQA-AAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHH-TTTCEEEEEECCSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHH-hhCCCCEEEECCCc
Confidence            5789999999999999999999999999999999998877665776532 2222   2222 23479999999874

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.79  E-value=0.0002  Score=72.28  Aligned_cols=39  Identities=21%  Similarity=0.175  Sum_probs=32.6

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      ..+++++++|+|+ |++|++++..|.+.|++|++++|+.+
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~   56 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT   56 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc
Confidence            4567899999998 99999999999999999999999754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.78  E-value=0.003  Score=63.91  Aligned_cols=76  Identities=16%  Similarity=0.243  Sum_probs=55.7

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc-----cc-cccccccCCCCceEEEEcCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-----LS-LADLENFNPEDGMILANTTS  453 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~-----~~-~~~~~~~~~~~~divVn~t~  453 (534)
                      ..++++.|+|+|.+|.++++.|+..|.  +|++++++.++++..+.++....     .. ..+..+ ....+|+||.+++
T Consensus         7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~-a~~~aDiVvi~ag   85 (326)
T 3vku_A            7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYS-DAKDADLVVITAG   85 (326)
T ss_dssp             CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGG-GGTTCSEEEECCC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHH-HhcCCCEEEECCC
Confidence            356789999999999999999999887  89999999999988877764211     01 111122 3567899999998


Q ss_pred             CCCCC
Q 009464          454 IGMQP  458 (534)
Q Consensus       454 ~g~~~  458 (534)
                      ....|
T Consensus        86 ~~~kp   90 (326)
T 3vku_A           86 APQKP   90 (326)
T ss_dssp             CC---
T ss_pred             CCCCC
Confidence            76554

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.78  E-value=0.0022  Score=66.14  Aligned_cols=75  Identities=19%  Similarity=0.140  Sum_probs=51.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHH-HCCCeEEEEeCCHHH------------H---HHHHHHHcCccc----c------
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAK-AKGARVVIANRTYDR------------A---RELAETVGGHAL----S------  433 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~-~~G~~v~i~~R~~~~------------a---~~la~~~~~~~~----~------  433 (534)
                      ...+|++||+|+ .|+|+|++.+|+ ..|++++++.|+.+.            .   ++.+++.+....    +      
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            346799999999 799999999998 679988888775431            2   233344443221    1      


Q ss_pred             ----cccccccCCCCceEEEEcCCCCC
Q 009464          434 ----LADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       434 ----~~~~~~~~~~~~divVn~t~~g~  456 (534)
                          ++.+.+ ..++.|+|||+.+.+.
T Consensus       127 i~~vi~~i~~-~~G~IDiLVhS~A~~~  152 (401)
T 4ggo_A          127 KAQVIEEAKK-KGIKFDLIVYSLASPV  152 (401)
T ss_dssp             HHHHHHHHHH-TTCCEEEEEECCCCSE
T ss_pred             HHHHHHHHHH-hcCCCCEEEEeccccc
Confidence                122233 5788999999998764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.77  E-value=0.00031  Score=65.67  Aligned_cols=67  Identities=13%  Similarity=0.030  Sum_probs=46.7

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCccccc---ccccccCCCCceEEEEcCCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSL---ADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~---~~~~~~~~~~~divVn~t~~g  455 (534)
                      .+++++|+|+ |++|++++..|.+.|.  +|++++|+.++.   .........++   +++.+ ..  +|+|||+++..
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---~~~~~~~~~D~~~~~~~~~-~~--~d~vi~~a~~~   76 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---HPRLDNPVGPLAELLPQLD-GS--IDTAFCCLGTT   76 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---CTTEECCBSCHHHHGGGCC-SC--CSEEEECCCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---CCCceEEeccccCHHHHHH-hh--hcEEEECeeec
Confidence            3578999998 9999999999999998  999999987640   00000011222   23333 23  89999999754

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.77  E-value=0.0013  Score=65.75  Aligned_cols=70  Identities=13%  Similarity=0.122  Sum_probs=48.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH------HHHHHHHHH--HcCcc--ccccc---ccccCCCCceEEE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY------DRARELAET--VGGHA--LSLAD---LENFNPEDGMILA  449 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~------~~a~~la~~--~~~~~--~~~~~---~~~~~~~~~divV  449 (534)
                      .++++|+|+ |++|++++..|.+.|++|+++.|+.      ++++.+...  -+...  .++.+   +.+ .+.++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~-a~~~~d~vi   82 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVS-VLKQVDIVI   82 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHH-HHTTCSEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHH-HHcCCCEEE
Confidence            467999998 9999999999999999999999985      444444221  11111  22322   333 345689999


Q ss_pred             EcCCC
Q 009464          450 NTTSI  454 (534)
Q Consensus       450 n~t~~  454 (534)
                      ++++.
T Consensus        83 ~~a~~   87 (321)
T 3c1o_A           83 SALPF   87 (321)
T ss_dssp             ECCCG
T ss_pred             ECCCc
Confidence            99874

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=96.76  E-value=0.0012  Score=67.15  Aligned_cols=47  Identities=32%  Similarity=0.432  Sum_probs=39.6

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG  428 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~  428 (534)
                      ++++++.|+|+|.+|.+++..|.+.|++|++++|+.++..+.+...+
T Consensus        14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G   60 (338)
T 1np3_A           14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHG   60 (338)
T ss_dssp             HHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTT
T ss_pred             hcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCC
Confidence            45678999999999999999999999999999999877555555443

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.75  E-value=0.0018  Score=66.40  Aligned_cols=70  Identities=16%  Similarity=0.167  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH---HHHHHHHHHHcCccccccc-ccc-c--CCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGHALSLAD-LEN-F--NPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~---~~a~~la~~~~~~~~~~~~-~~~-~--~~~~~divVn~t~~  454 (534)
                      +|++++|+|+|++|.+++..+...|++|++++|+.   ++. +++++++.+..+ .+ +.+ +  ....+|++|++++.
T Consensus       180 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~ga~~v~-~~~~~~~~~~~~~~~d~vid~~g~  256 (366)
T 2cdc_A          180 NCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEETKTNYYN-SSNGYDKLKDSVGKFDVIIDATGA  256 (366)
T ss_dssp             TTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHHTCEEEE-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHhCCceec-hHHHHHHHHHhCCCCCEEEECCCC
Confidence            38999999999999999999999999999999998   776 455667654332 21 111 0  01468999999974

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.73  E-value=0.003  Score=63.64  Aligned_cols=94  Identities=11%  Similarity=0.060  Sum_probs=62.5

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      .+++.|+|+|.||.+++..|.+.|.  +|++++|+.++++.+.+ .+.......++.+.....+|+||.|+|.....   
T Consensus        33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~-~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~---  108 (314)
T 3ggo_A           33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFR---  108 (314)
T ss_dssp             CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEESCTTGGGGGCCSEEEECSCGGGHH---
T ss_pred             CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-CCCcchhcCCHHHHhhccCCEEEEeCCHHHHH---
Confidence            4789999999999999999999999  99999999998876543 33210011222220124589999998864211   


Q ss_pred             CCCCC--ccccCCCCEEEEEecC
Q 009464          462 ETPIP--KHALGHYALVFDAVYT  482 (534)
Q Consensus       462 ~~~i~--~~~l~~~~~v~Dv~y~  482 (534)
                       .-+.  ...++++.+++|+.-.
T Consensus       109 -~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          109 -EIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             -HHHHHHHHHSCTTCEEEECCSC
T ss_pred             -HHHHHHhhccCCCcEEEECCCC
Confidence             0011  1235677889997643

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.72  E-value=0.0035  Score=63.53  Aligned_cols=72  Identities=22%  Similarity=0.214  Sum_probs=53.4

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccc---ccc----ccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA---DLE----NFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~---~~~----~~~~~~~divVn~t~  453 (534)
                      .|++++|+|+ ||+|++++..+...|++|++++|+.++.+.+.++++... .+..   ++.    +.....+|++||+++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  234 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG  234 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence            5789999998 999999999999999999999999998877665665432 2221   111    101146899999986


Q ss_pred             C
Q 009464          454 I  454 (534)
Q Consensus       454 ~  454 (534)
                      .
T Consensus       235 ~  235 (345)
T 2j3h_A          235 G  235 (345)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.72  E-value=0.0013  Score=65.06  Aligned_cols=70  Identities=21%  Similarity=0.261  Sum_probs=47.4

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC------HHHHHHHHHHH--cCcc--ccccc---ccccCCCCceEEE
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------YDRARELAETV--GGHA--LSLAD---LENFNPEDGMILA  449 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~------~~~a~~la~~~--~~~~--~~~~~---~~~~~~~~~divV  449 (534)
                      .++++|+|| |++|++++..|.+.|++|+++.|+      .++++.+...-  +.+.  .++.+   +.+ .+.++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~-~~~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVE-AVKNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHH-HHHTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHH-HHcCCCEEE
Confidence            467999999 999999999999999999999997      34444332211  1111  12222   222 234689999


Q ss_pred             EcCCC
Q 009464          450 NTTSI  454 (534)
Q Consensus       450 n~t~~  454 (534)
                      ++++.
T Consensus        83 ~~a~~   87 (308)
T 1qyc_A           83 STVGS   87 (308)
T ss_dssp             ECCCG
T ss_pred             ECCcc
Confidence            98864

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.71  E-value=0.0044  Score=63.49  Aligned_cols=35  Identities=20%  Similarity=0.480  Sum_probs=32.4

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      +++++|+|+|+||+|..++..|+..|+ +++|++++
T Consensus       116 L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D  151 (353)
T 3h5n_A          116 LKNAKVVILGCGGIGNHVSVILATSGIGEIILIDND  151 (353)
T ss_dssp             HHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             HhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence            456899999999999999999999999 99999976

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.70  E-value=0.0033  Score=63.96  Aligned_cols=69  Identities=25%  Similarity=0.235  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      .|++++|+|+|++|.+++..+...|++|+++.++.++.+ ++++++.+..- .+.+. ....+|+++++++.
T Consensus       176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~v~-~~~~~-~~~~~D~vid~~g~  244 (348)
T 3two_A          176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DALSMGVKHFY-TDPKQ-CKEELDFIISTIPT  244 (348)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHH-HHHHTTCSEEE-SSGGG-CCSCEEEEEECCCS
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHhcCCCeec-CCHHH-HhcCCCEEEECCCc
Confidence            478999999999999999999999999999999988876 45667754322 22222 22379999999874

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=96.70  E-value=0.0012  Score=65.98  Aligned_cols=119  Identities=13%  Similarity=0.070  Sum_probs=73.5

Q ss_pred             CcEEEEEcCchhHHH-HHHHHHHC-CCeEE-EEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKA-LAYGAKAK-GARVV-IANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       384 ~k~vlVlGaGG~gra-ia~~L~~~-G~~v~-i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      ..++.|+|+|.+|+. .+..|.+. +++++ +++|+.++++++++.++...  ++++.+ .+..+|+|+-+||...+.  
T Consensus         6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~--~~~~~~-ll~~~D~V~i~tp~~~h~--   80 (308)
T 3uuw_A            6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMP--FDSIES-LAKKCDCIFLHSSTETHY--   80 (308)
T ss_dssp             CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCB--CSCHHH-HHTTCSEEEECCCGGGHH--
T ss_pred             cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCC--cCCHHH-HHhcCCEEEEeCCcHhHH--
Confidence            358999999999996 78888774 66765 89999999999999987543  344443 122689999999855321  


Q ss_pred             CCCCCCccccCCCCEEEEEecCCC------hhHHHHHHHHCCCeEeccHHHHHHHHHH
Q 009464          461 DETPIPKHALGHYALVFDAVYTPK------ITRLLREAEESGATIVSGLEMFIGQAYE  512 (534)
Q Consensus       461 ~~~~i~~~~l~~~~~v~Dv~y~p~------~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~  512 (534)
                         ++-...++.+.-|+  +-+|.      ...+.+.|++.|..+.-|...-...+..
T Consensus        81 ---~~~~~al~~gk~vl--~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~  133 (308)
T 3uuw_A           81 ---EIIKILLNLGVHVY--VDKPLASTVSQGEELIELSTKKNLNLMVGFNRRFCPMYK  133 (308)
T ss_dssp             ---HHHHHHHHTTCEEE--ECSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHH
T ss_pred             ---HHHHHHHHCCCcEE--EcCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCHHHH
Confidence               11122233333222  22333      1245556666676665555444333333

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.68  E-value=0.0047  Score=62.52  Aligned_cols=75  Identities=16%  Similarity=0.201  Sum_probs=55.4

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCc------ccc-cccccccCCCCceEEEEcCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH------ALS-LADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~------~~~-~~~~~~~~~~~~divVn~t~~  454 (534)
                      .+++.|+|+|.+|.++++.|+..|.  +|++++++.++++..+.++...      ... ..+..+ ....+|+||.+++.
T Consensus         5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~-a~~~aDvVvi~ag~   83 (326)
T 3pqe_A            5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYE-DCKDADIVCICAGA   83 (326)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGG-GGTTCSEEEECCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHH-HhCCCCEEEEeccc
Confidence            4689999999999999999999887  8999999999988866655311      001 111112 35678999999987


Q ss_pred             CCCCC
Q 009464          455 GMQPK  459 (534)
Q Consensus       455 g~~~~  459 (534)
                      ...|.
T Consensus        84 p~kpG   88 (326)
T 3pqe_A           84 NQKPG   88 (326)
T ss_dssp             CCCTT
T ss_pred             CCCCC
Confidence            65543

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.68  E-value=0.0011  Score=66.57  Aligned_cols=109  Identities=15%  Similarity=0.083  Sum_probs=68.2

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC--HHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT--YDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~--~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      .+++.|||+|-||.+++..|++.|+ +|++++|+  .++.+.+. +.+...  ..+..+ ....+|+||-+++...... 
T Consensus        24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~-~~g~~~--~~~~~e-~~~~aDvVi~~vp~~~~~~-   98 (312)
T 3qsg_A           24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAE-ELGVSC--KASVAE-VAGECDVIFSLVTAQAALE-   98 (312)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHH-HTTCEE--CSCHHH-HHHHCSEEEECSCTTTHHH-
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHH-HCCCEE--eCCHHH-HHhcCCEEEEecCchhHHH-
Confidence            4689999999999999999999999 99999997  45555443 333221  112222 2235799999887543210 


Q ss_pred             CCCCCC--ccccCCCCEEEEEecCCChh--HHHHHHHHC--CCeEe
Q 009464          461 DETPIP--KHALGHYALVFDAVYTPKIT--RLLREAEES--GATIV  500 (534)
Q Consensus       461 ~~~~i~--~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~--G~~ii  500 (534)
                         .+.  ...++++.+++|..-.+..|  .+.+...++  |..++
T Consensus        99 ---~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~v  141 (312)
T 3qsg_A           99 ---VAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYA  141 (312)
T ss_dssp             ---HHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEE
T ss_pred             ---HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEE
Confidence               011  12356778999998654433  233344455  65543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.66  E-value=0.0014  Score=66.26  Aligned_cols=71  Identities=17%  Similarity=0.126  Sum_probs=48.1

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH----HHHHHHHHHH--cCcc--ccccc---ccccCCC--CceEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY----DRARELAETV--GGHA--LSLAD---LENFNPE--DGMIL  448 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~----~~a~~la~~~--~~~~--~~~~~---~~~~~~~--~~div  448 (534)
                      ..++++|+|| |.+|++++..|.+.|++|+++.|+.    ++++.+....  +...  .++.+   +.+ .+.  ++|+|
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~-~~~~~~~d~V   87 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEK-ILKEHEIDIV   87 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHH-HHHHTTCCEE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHH-HHhhCCCCEE
Confidence            3578999999 9999999999999999999999976    5554332221  1111  22222   222 233  68999


Q ss_pred             EEcCCC
Q 009464          449 ANTTSI  454 (534)
Q Consensus       449 Vn~t~~  454 (534)
                      |++++.
T Consensus        88 i~~a~~   93 (346)
T 3i6i_A           88 VSTVGG   93 (346)
T ss_dssp             EECCCG
T ss_pred             EECCch
Confidence            998874

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.66  E-value=0.00059  Score=69.57  Aligned_cols=39  Identities=23%  Similarity=0.413  Sum_probs=34.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHH--CCCeEEEEeCCHH
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKA--KGARVVIANRTYD  418 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~--~G~~v~i~~R~~~  418 (534)
                      .++++++|+|+|+ |++|++++..|.+  .|++|++++|+..
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            3567899999999 9999999999999  8999999999654

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=96.65  E-value=0.0043  Score=62.77  Aligned_cols=43  Identities=23%  Similarity=0.325  Sum_probs=39.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      ..++.|+|+|.+|.+++..|++.|.+|++++|+.++++.+.+.
T Consensus        14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~   56 (335)
T 1z82_A           14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVS   56 (335)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHh
Confidence            3579999999999999999999999999999999999988776

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.64  E-value=0.00074  Score=66.16  Aligned_cols=68  Identities=19%  Similarity=0.169  Sum_probs=49.6

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHcCcc--cccc---cccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAK--GARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~--G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~~~~~~~~~~divVn~t~~  454 (534)
                      |+++|+|+ |++|++++..|.+.  |++|+++.|+.++++++... +...  .++.   ++.+ ...++|+||++++.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~-~~~~~~~D~~d~~~l~~-~~~~~d~vi~~a~~   76 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQ-GVEVRHGDYNQPESLQK-AFAGVSKLLFISGP   76 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHT-TCEEEECCTTCHHHHHH-HTTTCSEEEECCCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhc-CCeEEEeccCCHHHHHH-HHhcCCEEEEcCCC
Confidence            46899999 99999999999998  89999999998877665431 1111  1222   2333 34568999999874

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.64  E-value=0.0035  Score=62.84  Aligned_cols=70  Identities=19%  Similarity=0.191  Sum_probs=53.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHcC------cccc--cccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGG------HALS--LADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G--~~v~i~~R~~~~a~~la~~~~~------~~~~--~~~~~~~~~~~~divVn~t~~  454 (534)
                      +++.|+|+|.+|.+++..|++.|  .+|++++|+.++++.++..+..      ....  ..+. + ....+|+||.+++.
T Consensus         2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~-~~~~aDvViiav~~   79 (309)
T 1hyh_A            2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-A-ALADADVVISTLGN   79 (309)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-G-GGTTCSEEEECCSC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-H-HhCCCCEEEEecCC
Confidence            37899999999999999999999  5899999999999888765531      0011  1233 2 34578999999986


Q ss_pred             CC
Q 009464          455 GM  456 (534)
Q Consensus       455 g~  456 (534)
                      ..
T Consensus        80 ~~   81 (309)
T 1hyh_A           80 IK   81 (309)
T ss_dssp             GG
T ss_pred             cc
Confidence            54

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.63  E-value=0.0067  Score=61.51  Aligned_cols=76  Identities=16%  Similarity=0.169  Sum_probs=57.5

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCc--------ccccccccccCCCCceEEEEc
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH--------ALSLADLENFNPEDGMILANT  451 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~--------~~~~~~~~~~~~~~~divVn~  451 (534)
                      ...+++.|+|+|.+|.++++.|+..|.  +|++++++.++++..+.++...        .....+.+  ....+|+||.+
T Consensus        17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~--~~~~aDiVvi~   94 (331)
T 4aj2_A           17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS--VTANSKLVIIT   94 (331)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG--GGTTEEEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH--HhCCCCEEEEc
Confidence            456799999999999999999999987  8999999999998887766411        00111222  35679999999


Q ss_pred             CCCCCCCC
Q 009464          452 TSIGMQPK  459 (534)
Q Consensus       452 t~~g~~~~  459 (534)
                      +++...|.
T Consensus        95 aG~~~kpG  102 (331)
T 4aj2_A           95 AGARQQEG  102 (331)
T ss_dssp             CSCCCCTT
T ss_pred             cCCCCCCC
Confidence            98765543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.62  E-value=0.0019  Score=63.75  Aligned_cols=69  Identities=25%  Similarity=0.286  Sum_probs=48.1

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCC-CeEEEEeCCHHHH--HHHHHHHcCcc--ccccc---ccccCCCCceEEEEcCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRA--RELAETVGGHA--LSLAD---LENFNPEDGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G-~~v~i~~R~~~~a--~~la~~~~~~~--~~~~~---~~~~~~~~~divVn~t~~  454 (534)
                      .++++|+|+ |++|++++..|.+.| ++|+++.|+.++.  +.+.. .+.+.  .++.+   +.+ ...++|+||++++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~-~~~~~~~~D~~d~~~l~~-~~~~~d~vi~~a~~   82 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL-QGAEVVQGDQDDQVIMEL-ALNGAYATFIVTNY   82 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH-TTCEEEECCTTCHHHHHH-HHTTCSEEEECCCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH-CCCEEEEecCCCHHHHHH-HHhcCCEEEEeCCC
Confidence            478999999 999999999999999 8999999987654  22221 12221  22222   222 34568999998863

>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*

Probab=96.62  E-value=0.004  Score=67.30  Aligned_cols=96  Identities=22%  Similarity=0.159  Sum_probs=66.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.++++.|+|.|.+|+++|..|...|++|++++|+....  .+...+....+++   + ....+|+|+.++|....  
T Consensus       138 ~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~a~~~g~~~~~l~---e-~~~~aDvV~l~~P~~~~--  209 (529)
T 1ygy_A          138 TEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPA--RAAQLGIELLSLD---D-LLARADFISVHLPKTPE--  209 (529)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHH--HHHHHTCEECCHH---H-HHHHCSEEEECCCCSTT--
T ss_pred             cccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCChh--HHHhcCcEEcCHH---H-HHhcCCEEEECCCCchH--
Confidence            46889999999999999999999999999999999986432  2344444332332   2 23357999999987521  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK  484 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~  484 (534)
                      . ..-+..   ..++++.+++|+.-.+.
T Consensus       210 t-~~~i~~~~~~~~k~g~ilin~arg~i  236 (529)
T 1ygy_A          210 T-AGLIDKEALAKTKPGVIIVNAARGGL  236 (529)
T ss_dssp             T-TTCBCHHHHTTSCTTEEEEECSCTTS
T ss_pred             H-HHHhCHHHHhCCCCCCEEEECCCCch
Confidence            1 112322   24567788999885443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.61  E-value=0.00064  Score=66.84  Aligned_cols=68  Identities=16%  Similarity=0.077  Sum_probs=48.5

Q ss_pred             EEEEEcC-chhHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---ccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~-G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~~~~~~divVn~t~~g  455 (534)
                      +++|+|| |++|++++..|.+. |++|+++.|+.++++.+... +.+.  .++.+   +.+ .+.++|+||++++..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~-~v~~~~~D~~d~~~l~~-~~~~~d~vi~~a~~~   76 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRG-KVSVRQLDYFNQESMVE-AFKGMDTVVFIPSII   76 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBT-TBEEEECCTTCHHHHHH-HTTTCSEEEECCCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhC-CCEEEEcCCCCHHHHHH-HHhCCCEEEEeCCCC
Confidence            5899998 99999999999998 88999999998876543211 1111  12222   333 356789999998753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.60  E-value=0.0023  Score=64.51  Aligned_cols=71  Identities=17%  Similarity=0.201  Sum_probs=47.4

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH----------HHHHHHHHHHcCc--c--ccccc---ccccCCC--
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY----------DRARELAETVGGH--A--LSLAD---LENFNPE--  443 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~----------~~a~~la~~~~~~--~--~~~~~---~~~~~~~--  443 (534)
                      +++++|+|+ |++|++++..|.+.|++|++++|+.          +..+.+.+..+..  .  .++.+   +.+ ...  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~-~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR-LFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH-HHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHH-HHHhc
Confidence            478999998 9999999999999999999998743          3344443322211  1  12222   222 122  


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      .+|+|||+++..
T Consensus        81 ~~d~vih~A~~~   92 (348)
T 1ek6_A           81 SFMAVIHFAGLK   92 (348)
T ss_dssp             CEEEEEECCSCC
T ss_pred             CCCEEEECCCCc
Confidence            689999999754

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.60  E-value=0.0013  Score=65.27  Aligned_cols=112  Identities=15%  Similarity=0.139  Sum_probs=70.8

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCC-CCCCC-
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQ-PKVDE-  462 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~-~~~~~-  462 (534)
                      .++.|+|+|.+|++++..|.+.|++|++++|+.++++.+.+. +..  ...+..+ ....+|+||.++|.... ...-. 
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~--~~~~~~~-~~~~~D~vi~~vp~~~~~~~v~~~   80 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ-GAQ--ACENNQK-VAAASDIIFTSLPNAGIVETVMNG   80 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT-TCE--ECSSHHH-HHHHCSEEEECCSSHHHHHHHHHS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCe--ecCCHHH-HHhCCCEEEEECCCHHHHHHHHcC
Confidence            579999999999999999999999999999999998887653 211  1122222 12357999999864321 00000 


Q ss_pred             -CCCCccccCCCCEEEEEecCCC-h-hHHHHHHHHCCCeEec
Q 009464          463 -TPIPKHALGHYALVFDAVYTPK-I-TRLLREAEESGATIVS  501 (534)
Q Consensus       463 -~~i~~~~l~~~~~v~Dv~y~p~-~-T~ll~~A~~~G~~ii~  501 (534)
                       ..+ ...++++.+++|+.-... . ..+.+...+.|..+++
T Consensus        81 ~~~l-~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~  121 (301)
T 3cky_A           81 PGGV-LSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD  121 (301)
T ss_dssp             TTCH-HHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             cchH-hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence             001 123566778888865432 2 2344445566776654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.59  E-value=0.0012  Score=66.00  Aligned_cols=70  Identities=16%  Similarity=0.234  Sum_probs=48.4

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHH--HHcCcc--ccccc---ccccCCCCceEEEEcCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAE--TVGGHA--LSLAD---LENFNPEDGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~--~~~~~~--~~~~~---~~~~~~~~~divVn~t~~  454 (534)
                      .++++|+|| |++|++++.+|.+.|++|+++.|+.+ +++.+.+  ..+.+.  .++.+   +.+ .+.++|+||++++.
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~-a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVE-LMKKVDVVISALAF   89 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHH-HHTTCSEEEECCCG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHH-HHcCCCEEEECCch
Confidence            357999998 99999999999999999999999874 4433321  112221  22322   333 34568999999874

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=96.58  E-value=0.011  Score=59.79  Aligned_cols=95  Identities=18%  Similarity=0.107  Sum_probs=58.3

Q ss_pred             CcEEEEEcCchhHHH-HHHHHHHCCCeEEEEeCCHH--HHHHHHHHHcCcccccccccccCC-CCceEEEEcCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYD--RARELAETVGGHALSLADLENFNP-EDGMILANTTSIGMQPK  459 (534)
Q Consensus       384 ~k~vlVlGaGG~gra-ia~~L~~~G~~v~i~~R~~~--~a~~la~~~~~~~~~~~~~~~~~~-~~~divVn~t~~g~~~~  459 (534)
                      .|++.|+|.||+|.+ +|..|.++|++|++++++..  ..++|.+ .+.....=.+..+ .. ..+|+||-+.++     
T Consensus         4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~-~gi~v~~g~~~~~-l~~~~~d~vV~Spgi-----   76 (326)
T 3eag_A            4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEA-LGIDVYEGFDAAQ-LDEFKADVYVIGNVA-----   76 (326)
T ss_dssp             CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHH-TTCEEEESCCGGG-GGSCCCSEEEECTTC-----
T ss_pred             CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHh-CCCEEECCCCHHH-cCCCCCCEEEECCCc-----
Confidence            478999999999996 78889999999999998642  2233322 1211100000000 00 123444432221     


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHHH
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIG  508 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~  508 (534)
                                             |...|.++.|+++|++++.-.+++..
T Consensus        77 -----------------------~~~~p~~~~a~~~gi~v~~~~e~~~~  102 (326)
T 3eag_A           77 -----------------------KRGMDVVEAILNLGLPYISGPQWLSE  102 (326)
T ss_dssp             -----------------------CTTCHHHHHHHHTTCCEEEHHHHHHH
T ss_pred             -----------------------CCCCHHHHHHHHcCCcEEeHHHHHHH
Confidence                                   33567888899999988888887664

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.58  E-value=0.0027  Score=71.99  Aligned_cols=74  Identities=20%  Similarity=0.290  Sum_probs=52.4

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHH-HCCC-eEEEEeCC---HHHHHHHHHHHc---Ccc----ccccc---cc----cc-C
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAK-AKGA-RVVIANRT---YDRARELAETVG---GHA----LSLAD---LE----NF-N  441 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~-~~G~-~v~i~~R~---~~~a~~la~~~~---~~~----~~~~~---~~----~~-~  441 (534)
                      .+|+++|+|+ ||+|++++..|+ +.|+ +|++++|+   .++++++.+++.   .+.    +++.+   +.    +. .
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            5789999999 899999999999 7999 69999999   455666666653   221    22221   11    10 1


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      ....|+||||+++..
T Consensus       609 ~~~id~lVnnAGv~~  623 (795)
T 3slk_A          609 EHPLTAVVHAAGVLD  623 (795)
T ss_dssp             TSCEEEEEECCCCCC
T ss_pred             hCCCEEEEECCCcCC
Confidence            126899999998763

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.57  E-value=0.00068  Score=68.17  Aligned_cols=69  Identities=20%  Similarity=0.205  Sum_probs=46.4

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccc---cccccCCCCceEEEEcCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~~~~~~~~~~divVn~t~~g  455 (534)
                      .+++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.. .+...  .++.   .+.+ ...++|+|||+++..
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~-~~~~~d~vih~a~~~   88 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLER-ALRGLDGVIFSAGYY   88 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHH-HTTTCSEEEEC----
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHH-HHcCCCEEEECCccC
Confidence            47999998 999999999999999999999998776544321 11111  1222   2223 345689999998753

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.57  E-value=0.0044  Score=62.34  Aligned_cols=74  Identities=22%  Similarity=0.262  Sum_probs=53.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHc---------CcccccccccccCCCCceEEEEcCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG---------GHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~---------~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      .+++.|+|+|.+|.+++..|+..|. +|++++++.++++..+..+.         .......+. + ....+|+||.+++
T Consensus         4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~-a~~~aDiVi~avg   81 (317)
T 2ewd_A            4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-A-DISGSDVVIITAS   81 (317)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-G-GGTTCSEEEECCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-H-HhCCCCEEEEeCC
Confidence            3589999999999999999999998 99999999888776532221         111111333 2 3467899999998


Q ss_pred             CCCCCC
Q 009464          454 IGMQPK  459 (534)
Q Consensus       454 ~g~~~~  459 (534)
                      ++..|.
T Consensus        82 ~p~~~g   87 (317)
T 2ewd_A           82 IPGRPK   87 (317)
T ss_dssp             CSSCCS
T ss_pred             CCCCCC
Confidence            776543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.57  E-value=0.0019  Score=69.16  Aligned_cols=74  Identities=18%  Similarity=0.244  Sum_probs=51.7

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHH---HHHHHHHHHc---Ccc----ccccc---ccc----c-CC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYD---RARELAETVG---GHA----LSLAD---LEN----F-NP  442 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~---~a~~la~~~~---~~~----~~~~~---~~~----~-~~  442 (534)
                      .+++++|+|+ ||+|++++..|++.|+ +|++++|+..   +++++.+++.   ...    +++.+   +.+    . ..
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            4789999999 9999999999999999 6999999875   3455555442   211    12221   111    0 12


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|+|||++++..
T Consensus       305 g~ld~VIh~AG~~~  318 (486)
T 2fr1_A          305 VPLSAVFHAAATLD  318 (486)
T ss_dssp             SCEEEEEECCCCCC
T ss_pred             CCCcEEEECCccCC
Confidence            46799999998753

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.57  E-value=0.0016  Score=64.66  Aligned_cols=112  Identities=13%  Similarity=0.180  Sum_probs=70.1

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCC-CCCC-C
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQ-PKVD-E  462 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~-~~~~-~  462 (534)
                      .++.|+|+|.+|.+++..|.+.|++|++++|+.++++.+.+. +...  ..+..+ ....+|+||.+++.... ...- .
T Consensus         6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~--~~~~~~-~~~~~D~vi~~v~~~~~~~~~~~~   81 (299)
T 1vpd_A            6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAET--ASTAKA-IAEQCDVIITMLPNSPHVKEVALG   81 (299)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEE--CSSHHH-HHHHCSEEEECCSSHHHHHHHHHS
T ss_pred             ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCee--cCCHHH-HHhCCCEEEEECCCHHHHHHHHhC
Confidence            379999999999999999999999999999999998887654 2211  122222 12357999999874311 0000 0


Q ss_pred             -CCCCccccCCCCEEEEEecCCCh-h-HHHHHHHHCCCeEec
Q 009464          463 -TPIPKHALGHYALVFDAVYTPKI-T-RLLREAEESGATIVS  501 (534)
Q Consensus       463 -~~i~~~~l~~~~~v~Dv~y~p~~-T-~ll~~A~~~G~~ii~  501 (534)
                       ..+ ...+.++.+++|+.-.... + .+.+...+.|..+++
T Consensus        82 ~~~l-~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~  122 (299)
T 1vpd_A           82 ENGI-IEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD  122 (299)
T ss_dssp             TTCH-HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred             cchH-hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence             001 1235667788888644332 2 343444555765543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.57  E-value=0.0017  Score=69.90  Aligned_cols=74  Identities=28%  Similarity=0.365  Sum_probs=52.3

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHH---HHHHHHHHHcC---cc----ccccc---cccc-CCCCce
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYD---RARELAETVGG---HA----LSLAD---LENF-NPEDGM  446 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~---~a~~la~~~~~---~~----~~~~~---~~~~-~~~~~d  446 (534)
                      .+++++|+|+ ||+|++++..|++.|+ +|++++|+..   .++++.+++..   +.    +++.+   +.++ .....|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            4689999999 9999999999999999 7999999874   35566555532   11    22222   1110 014589


Q ss_pred             EEEEcCCCCC
Q 009464          447 ILANTTSIGM  456 (534)
Q Consensus       447 ivVn~t~~g~  456 (534)
                      +|||++++..
T Consensus       338 ~VVh~AGv~~  347 (511)
T 2z5l_A          338 AVFHTAGILD  347 (511)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCcccC
Confidence            9999998753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=96.57  E-value=0.00069  Score=69.61  Aligned_cols=74  Identities=15%  Similarity=0.167  Sum_probs=50.2

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCC-CeEEEEeCCHHHHH-HHHHHHcCcc--cccc---cccccCCCCceEEEEcC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRAR-ELAETVGGHA--LSLA---DLENFNPEDGMILANTT  452 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G-~~v~i~~R~~~~a~-~la~~~~~~~--~~~~---~~~~~~~~~~divVn~t  452 (534)
                      .+++++++|+|+ |++|++++..|.+.| ++|++++|+.++.. .+...-+...  .++.   ++.+ ....+|+||+++
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~-~~~~~d~Vih~A  107 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLAS-LQDEYDYVFHLA  107 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHH-CCSCCSEEEECC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHH-HhhCCCEEEECC
Confidence            467889999999 999999999999999 89999999865421 1100000011  1222   2333 445789999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus       108 ~~~  110 (377)
T 2q1s_A          108 TYH  110 (377)
T ss_dssp             CCS
T ss_pred             Ccc
Confidence            754

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.56  E-value=0.0048  Score=62.93  Aligned_cols=71  Identities=27%  Similarity=0.296  Sum_probs=53.2

Q ss_pred             CC--cEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-ccccc------ccccCCCCceEEEEc
Q 009464          383 AG--KLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLAD------LENFNPEDGMILANT  451 (534)
Q Consensus       383 ~~--k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~~~~~~~~divVn~  451 (534)
                      .+  ++++|+|+ ||+|++++..++..|+ +|++++|+.++.+.+.++++... .+..+      +.+.....+|++|||
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~  237 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDN  237 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEEC
Confidence            46  89999999 9999999999999999 99999999988877766565432 22211      111111268999999


Q ss_pred             CC
Q 009464          452 TS  453 (534)
Q Consensus       452 t~  453 (534)
                      ++
T Consensus       238 ~G  239 (357)
T 2zb4_A          238 VG  239 (357)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.54  E-value=0.0044  Score=62.30  Aligned_cols=70  Identities=20%  Similarity=0.300  Sum_probs=51.3

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc------cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~~~-~~~~~divVn~t~  453 (534)
                      .+++++|+|+ ||+|++++..+...|++|++++|+.++.+.+. +++... .+..+      +.+. ....+|++|||++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g  218 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG  218 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence            4789999995 99999999999999999999999988876654 455432 22211      1110 1235899999987

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.54  E-value=0.0054  Score=62.53  Aligned_cols=70  Identities=23%  Similarity=0.356  Sum_probs=51.9

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc------cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~~~-~~~~~divVn~t~  453 (534)
                      .+++++|+|+ ||+|.+++..+...|++|++++|+.++.+ ++++++... .+..+      +.+. ....+|++|||++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G  248 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA  248 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999998 99999999999999999999999998877 456665432 22211      1110 1236899999986

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.53  E-value=0.00053  Score=70.06  Aligned_cols=74  Identities=16%  Similarity=0.190  Sum_probs=50.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHcCcc--cccc-c---ccccCCCCceEEEEcC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA--LSLA-D---LENFNPEDGMILANTT  452 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~-G~~v~i~~R~~~~a~~la~~~~~~~--~~~~-~---~~~~~~~~~divVn~t  452 (534)
                      .+.+++++|+|+ |.+|++++..|.+. |++|++++|+.++...+...-+...  .++. +   +.+ ...++|+||+++
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~-~~~~~d~Vih~A   99 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEY-HVKKCDVILPLV   99 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHH-HHHHCSEEEECB
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHH-HhccCCEEEEcC
Confidence            456789999998 99999999999998 8999999999876554432111111  1222 2   222 234689999998


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus       100 ~~~  102 (372)
T 3slg_A          100 AIA  102 (372)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            754

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.52  E-value=0.0054  Score=61.91  Aligned_cols=71  Identities=23%  Similarity=0.335  Sum_probs=52.4

Q ss_pred             CCcEEEEEc-CchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccc--c----cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA--D----LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlG-aGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~--~----~~~~-~~~~~divVn~t~  453 (534)
                      .|++++|+| +|++|.+++..+...|++|+++.|+.++.+ ++++++... .+..  +    +.+. ....+|+++||++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g  226 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVG  226 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCC
Confidence            578999999 599999999999999999999999998876 556676432 2211  1    1110 1236899999987


Q ss_pred             C
Q 009464          454 I  454 (534)
Q Consensus       454 ~  454 (534)
                      .
T Consensus       227 ~  227 (334)
T 3qwb_A          227 K  227 (334)
T ss_dssp             G
T ss_pred             h
Confidence            3

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.52  E-value=0.0059  Score=61.75  Aligned_cols=75  Identities=20%  Similarity=0.180  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcC---------cccccccccccCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG---------HALSLADLENFNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~---------~~~~~~~~~~~~~~~~divVn~t  452 (534)
                      +.+++.|+|+|.+|.++++.|+..|. +|++++++.++++..+.++..         ......+. + ....+|+||.++
T Consensus         6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~-a~~~aDiVIiaa   83 (324)
T 3gvi_A            6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-A-AIEGADVVIVTA   83 (324)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-G-GGTTCSEEEECC
T ss_pred             cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-H-HHCCCCEEEEcc
Confidence            45789999999999999999999998 999999999887655544421         11111233 3 456789999999


Q ss_pred             CCCCCCC
Q 009464          453 SIGMQPK  459 (534)
Q Consensus       453 ~~g~~~~  459 (534)
                      +....|.
T Consensus        84 g~p~k~G   90 (324)
T 3gvi_A           84 GVPRKPG   90 (324)
T ss_dssp             SCCCC--
T ss_pred             CcCCCCC
Confidence            8765543

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=96.52  E-value=0.0048  Score=62.23  Aligned_cols=71  Identities=18%  Similarity=0.300  Sum_probs=51.9

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc------cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~~~-~~~~~divVn~t~  453 (534)
                      .+++++|+|+ ||+|++++..+...|++|++++|+.++.+.+. +++... .+..+      +.+. ....+|++|||++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g  223 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIG  223 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCc
Confidence            4789999997 99999999999999999999999988876654 465432 22211      1110 1236899999987


Q ss_pred             C
Q 009464          454 I  454 (534)
Q Consensus       454 ~  454 (534)
                      .
T Consensus       224 ~  224 (333)
T 1wly_A          224 K  224 (333)
T ss_dssp             T
T ss_pred             H
Confidence            4

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.51  E-value=0.0029  Score=64.30  Aligned_cols=70  Identities=23%  Similarity=0.248  Sum_probs=51.5

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc------------cccccccccCCCCceEEEEcC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA------------LSLADLENFNPEDGMILANTT  452 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~------------~~~~~~~~~~~~~~divVn~t  452 (534)
                      .++.|+|+|.+|..++..|++.|.+|++++|+.++++++.+..+...            ....+..+ ....+|+||.++
T Consensus         5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vi~~v   83 (359)
T 1bg6_A            5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL-AVKDADVILIVV   83 (359)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH-HHTTCSEEEECS
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHH-HHhcCCEEEEeC
Confidence            57999999999999999999999999999999999988877632100            01112222 234578888888


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus        84 ~~~   86 (359)
T 1bg6_A           84 PAI   86 (359)
T ss_dssp             CGG
T ss_pred             Cch
Confidence            643

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=96.51  E-value=0.0024  Score=66.74  Aligned_cols=37  Identities=19%  Similarity=0.075  Sum_probs=33.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      ..++++||+|| |++|++++..|.+.|++|+++.|+.+
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~  104 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN  104 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence            45789999999 99999999999989999999999877

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=96.51  E-value=0.0045  Score=61.14  Aligned_cols=69  Identities=23%  Similarity=0.177  Sum_probs=49.7

Q ss_pred             cEEEEEcCchhHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAK--GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~--G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      +++.|+|+|.+|.+++..|.+.  |.+|++++|+.++++.+.+ .+.......+..+ ....+|+||-|+|..
T Consensus         7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~aDvVilavp~~   77 (290)
T 3b1f_A            7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE-RGIVDEATADFKV-FAALADVIILAVPIK   77 (290)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH-TTSCSEEESCTTT-TGGGCSEEEECSCHH
T ss_pred             ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH-cCCcccccCCHHH-hhcCCCEEEEcCCHH
Confidence            5899999999999999999988  4699999999998887654 3221011223333 234678888888743

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=96.50  E-value=0.001  Score=66.86  Aligned_cols=36  Identities=28%  Similarity=0.184  Sum_probs=32.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      +|++||+|+ |++|++++..|.+.|++|+++.|+.++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~   45 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDN   45 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcch
Confidence            689999998 999999999999999999988887653

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.49  E-value=0.00087  Score=65.53  Aligned_cols=67  Identities=19%  Similarity=0.202  Sum_probs=47.5

Q ss_pred             EEEEEcC-chhHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHcCcc--cccc---cccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAK--GARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~--G~~v~i~~R~~~~a~~la~~~~~~~--~~~~---~~~~~~~~~~divVn~t~~  454 (534)
                      +++|+|+ |++|++++..|.+.  |++|++++|+.++.+.+... +...  .++.   ++.+ ...++|+|||+++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~d~~~~~~-~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQ-GITVRQADYGDEAALTS-ALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHT-TCEEEECCTTCHHHHHH-HTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcC-CCeEEEcCCCCHHHHHH-HHhCCCEEEEeCCC
Confidence            4799999 99999999999998  89999999998876655431 1111  1222   2333 34568999999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.48  E-value=0.0049  Score=62.61  Aligned_cols=71  Identities=18%  Similarity=0.255  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCc-hhHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHcCcc-ccccc------ccccCC-CCceEEEEcC
Q 009464          383 AGKLFVVIGAG-GAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA-LSLAD------LENFNP-EDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaG-G~graia~~L~~~-G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~~~~~-~~~divVn~t  452 (534)
                      .+++++|+|+| |+|++++..+... |++|++++|+.++.+.+ ++++... .+..+      +.+... +.+|++||++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  248 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADYVINASMQDPLAEIRRITESKGVDAVIDLN  248 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECC
Confidence            47899999996 9999999999998 99999999999887655 5565432 22211      111111 4799999998


Q ss_pred             CC
Q 009464          453 SI  454 (534)
Q Consensus       453 ~~  454 (534)
                      +.
T Consensus       249 g~  250 (347)
T 1jvb_A          249 NS  250 (347)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=96.48  E-value=0.0023  Score=64.60  Aligned_cols=74  Identities=16%  Similarity=0.147  Sum_probs=47.1

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH-cCccccc--ccccccCCCCceEEEEcCCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHALSL--ADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~-~~~~~~~--~~~~~~~~~~~divVn~t~~g  455 (534)
                      +++++++|+|+ |++|++++..|.+.|++|++++|+.....+....+ ......+  .|+.+.....+|+||++++..
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~  102 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPA  102 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECcccc
Confidence            45789999999 99999999999999999999998643211111111 1110111  122221345789999998754

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.48  E-value=0.0068  Score=61.79  Aligned_cols=71  Identities=15%  Similarity=0.231  Sum_probs=52.4

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc------cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~~~-~~~~~divVn~t~  453 (534)
                      .|++++|+|+ ||+|.+++..+...|++|++++|+.++.+.+ ++++... .+..+      +.+. ....+|++|||++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G  240 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG  240 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCC
Confidence            4789999995 9999999999999999999999999887766 5665432 22211      1110 1236899999987


Q ss_pred             C
Q 009464          454 I  454 (534)
Q Consensus       454 ~  454 (534)
                      .
T Consensus       241 ~  241 (354)
T 2j8z_A          241 G  241 (354)
T ss_dssp             G
T ss_pred             c
Confidence            3

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=96.46  E-value=0.0014  Score=64.90  Aligned_cols=68  Identities=19%  Similarity=0.179  Sum_probs=45.7

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc--cccccc--ccccCCCCceEEEEcCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--ALSLAD--LENFNPEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~~~~~~--~~~~~~~~~divVn~t~~g  455 (534)
                      ++++|+|+ |++|++++..|.+.|++|++++|+.++..+... .+..  ..++.+  +.+ .... |+|||+++..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~d~~~~~-~~~~-d~vih~A~~~   73 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVN-PSAELHVRDLKDYSWGA-GIKG-DVVFHFAANP   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSC-TTSEEECCCTTSTTTTT-TCCC-SEEEECCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcC-CCceEEECccccHHHHh-hcCC-CEEEECCCCC
Confidence            47999999 999999999999999999999997654332210 0111  112222  223 2333 9999999743

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.46  E-value=0.0032  Score=64.64  Aligned_cols=43  Identities=28%  Similarity=0.372  Sum_probs=39.6

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      ..++.|+|+|.+|.+++..|++.|.+|++++|++++++.+.+.
T Consensus        29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~   71 (356)
T 3k96_A           29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAE   71 (356)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHH
T ss_pred             CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence            4579999999999999999999999999999999999888765

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=96.45  E-value=0.0015  Score=65.70  Aligned_cols=121  Identities=17%  Similarity=0.111  Sum_probs=78.2

Q ss_pred             cEEEEEcCchhHHH-HHHHHHHC-CCeEE-EEeCCHHHHHHHHHHHcCcc-cccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKA-LAYGAKAK-GARVV-IANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       385 k~vlVlGaGG~gra-ia~~L~~~-G~~v~-i~~R~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      .++.|+|+|.+|+. .+..|.+. |++++ +++|+.++++++++.++... .+++++    ...+|+|+.+||.....  
T Consensus         6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l----~~~~D~V~i~tp~~~h~--   79 (319)
T 1tlt_A            6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSL----AASCDAVFVHSSTASHF--   79 (319)
T ss_dssp             EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHH----HTTCSEEEECSCTTHHH--
T ss_pred             ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHh----hcCCCEEEEeCCchhHH--
Confidence            47999999999996 88888764 66765 99999999999999886542 122333    24689999999854321  


Q ss_pred             CCCCCCccccCCCC-EEEEEecCCC------hhHHHHHHHHCCCeEeccHHHHHHHHHHHHHHh
Q 009464          461 DETPIPKHALGHYA-LVFDAVYTPK------ITRLLREAEESGATIVSGLEMFIGQAYEQYERF  517 (534)
Q Consensus       461 ~~~~i~~~~l~~~~-~v~Dv~y~p~------~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~qf~lw  517 (534)
                         ++....++.+. ++++   +|.      ...+.+.|++.|..+..|..+-...+....+-+
T Consensus        80 ---~~~~~al~~G~~v~~e---KP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~k~~  137 (319)
T 1tlt_A           80 ---DVVSTLLNAGVHVCVD---KPLAENLRDAERLVELAARKKLTLMVGFNRRFAPLYGELKTQ  137 (319)
T ss_dssp             ---HHHHHHHHTTCEEEEE---SSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCHHHHHHTTT
T ss_pred             ---HHHHHHHHcCCeEEEe---CCCCCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHH
Confidence               12222344443 3333   333      235667778888877777666555555444433

>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1

Probab=96.44  E-value=0.037  Score=57.70  Aligned_cols=130  Identities=17%  Similarity=0.211  Sum_probs=80.3

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEE-EEeC----------CHHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~-i~~R----------~~~~a~~la~  425 (534)
                      +.|.+.+++..++.       .+.++++++++|.|.|.+|..++..|.+.|++|+ +.+.          +.+.+.++.+
T Consensus       190 g~Gv~~~~~~~~~~-------~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~  262 (421)
T 1v9l_A          190 GFGVAVATREMAKK-------LWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKG  262 (421)
T ss_dssp             HHHHHHHHHHHHHH-------HHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred             HHHHHHHHHHHHHh-------cCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence            56777777665543       1357889999999999999999999999999876 7776          4565555433


Q ss_pred             HHcC------------ccc-ccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHH
Q 009464          426 TVGG------------HAL-SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA  492 (534)
Q Consensus       426 ~~~~------------~~~-~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A  492 (534)
                      ..+.            ... +-+++   ....+|+++.|+--+.   .+..  ....+ ...+|.+-.-.|.....-+.-
T Consensus       263 ~~g~~~v~~y~~~~~~~~~~~~~~~---~~~~~Dil~P~A~~~~---I~~~--~a~~l-~ak~V~EgAN~p~t~~a~~~l  333 (421)
T 1v9l_A          263 LTGPALVELFTTKDNAEFVKNPDAI---FKLDVDIFVPAAIENV---IRGD--NAGLV-KARLVVEGANGPTTPEAERIL  333 (421)
T ss_dssp             SCHHHHHHHHHHTSCCCCCSSTTGG---GGCCCSEEEECSCSSC---BCTT--TTTTC-CCSEEECCSSSCBCHHHHHHH
T ss_pred             hhCCccccccccccCceEeCCchhh---hcCCccEEEecCcCCc---cchh--hHHHc-CceEEEecCCCcCCHHHHHHH
Confidence            2111            111 11111   1236899999884221   1111  11223 346888888777533333445


Q ss_pred             HHCCCeEecc
Q 009464          493 EESGATIVSG  502 (534)
Q Consensus       493 ~~~G~~ii~G  502 (534)
                      +++|+.++++
T Consensus       334 ~~~Gi~~~PD  343 (421)
T 1v9l_A          334 YERGVVVVPD  343 (421)
T ss_dssp             HTTTCEEECH
T ss_pred             HHCCCEEeCh
Confidence            6778877753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.44  E-value=0.0021  Score=63.87  Aligned_cols=67  Identities=18%  Similarity=0.176  Sum_probs=46.7

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccc--ccccccCCCCceEEEEcCCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSL--ADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~--~~~~~~~~~~~divVn~t~~g  455 (534)
                      .++++|+|+ |.+|++++..|.+.|.+|++++|+.++.+ +.   +...  .++  +++.+ ...++|+|||+++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl~~~~~~~-~~~~~d~Vih~a~~~   73 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDYTLEDLIN-QLNDVDAVVHLAATR   73 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCCHHHHHH-HTTTCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEccccHHHHHH-hhcCCCEEEEccccC
Confidence            368999998 99999999999999999999999844433 22   2111  122  22333 345789999998764

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.43  E-value=0.0069  Score=61.07  Aligned_cols=71  Identities=17%  Similarity=0.244  Sum_probs=53.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcC------c-ccccccccccCCCCceEEEEcCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG------H-ALSLADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~------~-~~~~~~~~~~~~~~~divVn~t~~g~  456 (534)
                      ++.|+|+|.+|.+++..|+..|.  +|++++|+.++++.++..+..      . .....+. + ....+|+||.+++.+.
T Consensus         2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~-~-~~~~aDvViiav~~~~   79 (319)
T 1a5z_A            2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-A-DLKGSDVVIVAAGVPQ   79 (319)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-G-GGTTCSEEEECCCCCC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCH-H-HhCCCCEEEEccCCCC
Confidence            68999999999999999999998  999999999988887654421      0 0111222 2 3457899999998765


Q ss_pred             CC
Q 009464          457 QP  458 (534)
Q Consensus       457 ~~  458 (534)
                      .|
T Consensus        80 ~~   81 (319)
T 1a5z_A           80 KP   81 (319)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A

Probab=96.42  E-value=0.054  Score=56.39  Aligned_cols=132  Identities=14%  Similarity=0.124  Sum_probs=84.8

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHH-CCCeEE-EEeC----------CHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGARVV-IANR----------TYDRARELA  424 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~-~G~~v~-i~~R----------~~~~a~~la  424 (534)
                      +.|.+.+++..++..       +.++++++++|.|.|.+|+.++..|.+ +|++|+ +.++          +.+.+.++.
T Consensus       189 g~Gv~~~~~~~~~~~-------g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~  261 (415)
T 2tmg_A          189 GRGVKVCAGLAMDVL-------GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYK  261 (415)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-------CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHH
Confidence            567777777655531       357889999999999999999999999 999876 7776          777787777


Q ss_pred             HHHcCccccccc---c--cccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeE
Q 009464          425 ETVGGHALSLAD---L--ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATI  499 (534)
Q Consensus       425 ~~~~~~~~~~~~---~--~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~i  499 (534)
                      +..+ ....+..   +  .++....+|+++.|+.-+.-   +..  ....+ ...+|..-.-.|.....-+...++|+.+
T Consensus       262 ~~~g-~l~~y~~a~~~~~~eil~~~~DIliP~A~~n~i---~~~--~a~~l-~ak~V~EgAN~p~t~~a~~~l~~~Gi~~  334 (415)
T 2tmg_A          262 KEHG-TVVTYPKGERITNEELLELDVDILVPAALEGAI---HAG--NAERI-KAKAVVEGANGPTTPEADEILSRRGILV  334 (415)
T ss_dssp             HHSS-CSTTCSSSEEECHHHHTTCSCSEEEECSSTTSB---CHH--HHTTC-CCSEEECCSSSCBCHHHHHHHHHTTCEE
T ss_pred             HhhC-CcccCCCceEcCchhhhcCCCcEEEecCCcCcc---Ccc--cHHHc-CCeEEEeCCCcccCHHHHHHHHHCCCEE
Confidence            7643 1111110   0  11112368999999853321   110  11223 4468888887775333444456789877


Q ss_pred             ecc
Q 009464          500 VSG  502 (534)
Q Consensus       500 i~G  502 (534)
                      ++.
T Consensus       335 ~PD  337 (415)
T 2tmg_A          335 VPD  337 (415)
T ss_dssp             ECH
T ss_pred             ECh
Confidence            753

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=96.41  E-value=0.0012  Score=68.92  Aligned_cols=108  Identities=15%  Similarity=0.171  Sum_probs=69.5

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      +..+.||++.|+|.|.+|+++|..+...|++|+.++|+.....       .......++.+ .+..+|+|+.++|.... 
T Consensus       151 ~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~-------~~~~~~~sl~e-ll~~aDvV~lhvPlt~~-  221 (416)
T 3k5p_A          151 SREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY-------GNVKPAASLDE-LLKTSDVVSLHVPSSKS-  221 (416)
T ss_dssp             CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB-------TTBEECSSHHH-HHHHCSEEEECCCC----
T ss_pred             CccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc-------cCcEecCCHHH-HHhhCCEEEEeCCCCHH-
Confidence            3568899999999999999999999999999999998743210       01111222333 23457999988886421 


Q ss_pred             CCCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHCCC
Q 009464          459 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGA  497 (534)
Q Consensus       459 ~~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~  497 (534)
                        ....+...   .++++.+++|+.-.+. .+.-+..|.+.|.
T Consensus       222 --T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~  262 (416)
T 3k5p_A          222 --TSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGH  262 (416)
T ss_dssp             ----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTS
T ss_pred             --HhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCC
Confidence              11223332   3567788888886544 5555566655553

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.41  E-value=0.0015  Score=64.21  Aligned_cols=61  Identities=13%  Similarity=0.141  Sum_probs=43.7

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCC--CceEEEEcCCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPE--DGMILANTTSIG  455 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~--~~divVn~t~~g  455 (534)
                      +.++++|+|+ |.+|++++..|.+.|++|++++|+.           .+..+.+++.+ ...  .+|+|||+++..
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------~Dl~d~~~~~~-~~~~~~~d~vih~A~~~   74 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------LDITNVLAVNK-FFNEKKPNVVINCAAHT   74 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------CCTTCHHHHHH-HHHHHCCSEEEECCCCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-----------CCCCCHHHHHH-HHHhcCCCEEEECCccC
Confidence            4689999999 9999999999999999999999862           11111112222 112  579999998754

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.40  E-value=0.0048  Score=65.77  Aligned_cols=68  Identities=28%  Similarity=0.325  Sum_probs=48.7

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTT  452 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t  452 (534)
                      ..+.||++.|+|.|.+|+.+|..|...|++|++++|+..++.+.. ..+....+   +.+ .+..+|+||.++
T Consensus       273 ~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~~~~---l~e-ll~~aDiVi~~~  340 (494)
T 3d64_A          273 VMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYRVVT---MEY-AADKADIFVTAT  340 (494)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCEECC---HHH-HTTTCSEEEECS
T ss_pred             cccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCEeCC---HHH-HHhcCCEEEECC
Confidence            457899999999999999999999999999999999988753322 12222222   222 234466666665

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.40  E-value=0.0049  Score=65.48  Aligned_cols=68  Identities=28%  Similarity=0.321  Sum_probs=50.8

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTT  452 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t  452 (534)
                      ..+.||++.|+|.|.+|+++|..|...|++|++++|+..++.+.. ..+...   .++.+ .+..+|+||.++
T Consensus       253 ~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~~---~~l~e-ll~~aDiVi~~~  320 (479)
T 1v8b_A          253 FLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFNV---VTLDE-IVDKGDFFITCT  320 (479)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCEE---CCHHH-HTTTCSEEEECC
T ss_pred             cccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCEe---cCHHH-HHhcCCEEEECC
Confidence            467899999999999999999999999999999999998764322 222222   22333 345678888875

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.39  E-value=0.0075  Score=60.93  Aligned_cols=74  Identities=22%  Similarity=0.228  Sum_probs=55.7

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc------cccc---ccccccCCCCceEEEEcCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH------ALSL---ADLENFNPEDGMILANTTS  453 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~------~~~~---~~~~~~~~~~~divVn~t~  453 (534)
                      .+++.|+|+|.+|.++++.|+..|. +|++++++.++++..+.++...      ...+   .+. + ....+|+||.+++
T Consensus         5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~-~-a~~~aDvVIi~ag   82 (321)
T 3p7m_A            5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDY-K-DLENSDVVIVTAG   82 (321)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-G-GGTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCH-H-HHCCCCEEEEcCC
Confidence            4689999999999999999999888 9999999999887766655421      1111   222 2 4567899999998


Q ss_pred             CCCCCC
Q 009464          454 IGMQPK  459 (534)
Q Consensus       454 ~g~~~~  459 (534)
                      ....|.
T Consensus        83 ~p~k~G   88 (321)
T 3p7m_A           83 VPRKPG   88 (321)
T ss_dssp             CCCCTT
T ss_pred             cCCCCC
Confidence            765543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.39  E-value=0.00072  Score=69.58  Aligned_cols=73  Identities=14%  Similarity=0.005  Sum_probs=49.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---ccccCCCCceEEEEcCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSI  454 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~~~~~~divVn~t~~  454 (534)
                      ....++++|+|+ |++|++++..|.+.|++|++++|+.++...... -+...  .++.+   +.+ ....+|+|||+++.
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~-~~~~~d~Vih~A~~  103 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM-FCDEFHLVDLRVMENCLK-VTEGVDHVFNLAAD  103 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGG-TCSEEEECCTTSHHHHHH-HHTTCSEEEECCCC
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhcc-CCceEEECCCCCHHHHHH-HhCCCCEEEECcee
Confidence            345689999999 999999999999999999999998654322110 01111  12222   222 23468999999875


Q ss_pred             C
Q 009464          455 G  455 (534)
Q Consensus       455 g  455 (534)
                      .
T Consensus       104 ~  104 (379)
T 2c5a_A          104 M  104 (379)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=96.39  E-value=0.0042  Score=66.23  Aligned_cols=112  Identities=24%  Similarity=0.230  Sum_probs=70.8

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc-cccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA-LSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~-~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      +++.|+|+|.||.+++..|++.|.+|++++|+.++++++.+..+   ... .+.+++.+ .++.+|+||-+++.+..  .
T Consensus         6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~-~l~~aDvVilavp~~~~--v   82 (474)
T 2iz1_A            6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVG-SLEKPRRIMLMVQAGAA--T   82 (474)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHH-TBCSSCEEEECCCTTHH--H
T ss_pred             CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHh-hccCCCEEEEEccCchH--H
Confidence            56999999999999999999999999999999999999987652   111 12222222 22358999999876421  0


Q ss_pred             CCCCCC--ccccCCCCEEEEEecCC-Chh-HHHHHHHHCCCeEe
Q 009464          461 DETPIP--KHALGHYALVFDAVYTP-KIT-RLLREAEESGATIV  500 (534)
Q Consensus       461 ~~~~i~--~~~l~~~~~v~Dv~y~p-~~T-~ll~~A~~~G~~ii  500 (534)
                      +. -+.  ...++++.+++|+.-.. ..| .+.+..++.|..++
T Consensus        83 ~~-vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v  125 (474)
T 2iz1_A           83 DA-TIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFI  125 (474)
T ss_dssp             HH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEE
T ss_pred             HH-HHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEE
Confidence            00 011  12355667888876432 233 23333344565543

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.38  E-value=0.0013  Score=67.68  Aligned_cols=36  Identities=19%  Similarity=0.197  Sum_probs=31.9

Q ss_pred             CcEEEEEcC-chhHHHHHHHHH-HCCCeEEEEeCCHHH
Q 009464          384 GKLFVVIGA-GGAGKALAYGAK-AKGARVVIANRTYDR  419 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~-~~G~~v~i~~R~~~~  419 (534)
                      ++++||+|+ |++|++++..|. +.|++|++++|+...
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~   39 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGT   39 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcc
Confidence            358999998 999999999999 999999999987543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.37  E-value=0.0065  Score=61.69  Aligned_cols=71  Identities=25%  Similarity=0.336  Sum_probs=51.4

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-ccccc---cccc----cCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLA---DLEN----FNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-~~~~~---~~~~----~~~~~~divVn~t~  453 (534)
                      .+++++|+|+ ||+|++++..+...|++|++++|+.++.+ ++++++.. ..+..   ++.+    ...+.+|++||+++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~-~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  247 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE-LFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSV  247 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH-HHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH-HHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence            4789999999 89999999999999999999999988874 44556543 22222   1111    01126899999987


Q ss_pred             C
Q 009464          454 I  454 (534)
Q Consensus       454 ~  454 (534)
                      .
T Consensus       248 ~  248 (347)
T 2hcy_A          248 S  248 (347)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.36  E-value=0.0068  Score=61.06  Aligned_cols=75  Identities=23%  Similarity=0.244  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC--HHHHHHHHHHHcCc------c--cc-cccccccCCCCceEEEE
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT--YDRARELAETVGGH------A--LS-LADLENFNPEDGMILAN  450 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~--~~~a~~la~~~~~~------~--~~-~~~~~~~~~~~~divVn  450 (534)
                      +.+++.|+|+|.+|.++++.|+..|. +|++++++  .++++..+.++...      .  +. ..+. + ....+|+||.
T Consensus         7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~-~-a~~~aDvVIi   84 (315)
T 3tl2_A            7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDY-A-DTADSDVVVI   84 (315)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCG-G-GGTTCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCH-H-HhCCCCEEEE
Confidence            45789999999999999999999999 99999999  67776665444210      0  11 1122 2 3567899999


Q ss_pred             cCCCCCCCC
Q 009464          451 TTSIGMQPK  459 (534)
Q Consensus       451 ~t~~g~~~~  459 (534)
                      +++....|.
T Consensus        85 aag~p~kpg   93 (315)
T 3tl2_A           85 TAGIARKPG   93 (315)
T ss_dssp             CCSCCCCTT
T ss_pred             eCCCCCCCC
Confidence            998765553

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.35  E-value=0.0078  Score=60.02  Aligned_cols=72  Identities=18%  Similarity=0.176  Sum_probs=52.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcC------cc--cc-cccccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG------HA--LS-LADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~------~~--~~-~~~~~~~~~~~~divVn~t~~  454 (534)
                      ++.|+|+|.+|.++++.|+..|.  +|+++++++++++..+.++..      ..  +. ..+ .+ ....+|+||.+++.
T Consensus         2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~-a~~~aDiVViaag~   79 (294)
T 1oju_A            2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YS-LLKGSEIIVVTAGL   79 (294)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GG-GGTTCSEEEECCCC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HH-HhCCCCEEEECCCC
Confidence            68999999999999999999887  899999999988744433211      00  11 123 33 45678999999987


Q ss_pred             CCCCC
Q 009464          455 GMQPK  459 (534)
Q Consensus       455 g~~~~  459 (534)
                      ...|.
T Consensus        80 ~~kpG   84 (294)
T 1oju_A           80 ARKPG   84 (294)
T ss_dssp             CCCSS
T ss_pred             CCCCC
Confidence            65543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.35  E-value=0.0025  Score=64.00  Aligned_cols=32  Identities=22%  Similarity=0.336  Sum_probs=29.6

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~  416 (534)
                      +++||+|+ |++|++++..|.+.|++|++++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNL   34 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCC
Confidence            57999998 999999999999999999999874

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=96.35  E-value=0.0036  Score=66.78  Aligned_cols=111  Identities=23%  Similarity=0.288  Sum_probs=69.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----c-cccccccccc--CCCCceEEEEcCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H-ALSLADLENF--NPEDGMILANTTSIGMQP  458 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~-~~~~~~~~~~--~~~~~divVn~t~~g~~~  458 (534)
                      ++.|+|+|.||.+++..|++.|.+|++++|+.++++++.+..+.    . .....++.++  .+..+|+||-+++.+.. 
T Consensus         3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~-   81 (478)
T 1pgj_A            3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA-   81 (478)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH-
T ss_pred             EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH-
Confidence            58899999999999999999999999999999999999876441    1 1111222221  12248999999876411 


Q ss_pred             CCCCCCCC--ccccCCCCEEEEEecCC-Chh-HHHHHHHHCCCeE
Q 009464          459 KVDETPIP--KHALGHYALVFDAVYTP-KIT-RLLREAEESGATI  499 (534)
Q Consensus       459 ~~~~~~i~--~~~l~~~~~v~Dv~y~p-~~T-~ll~~A~~~G~~i  499 (534)
                       .+. -+.  ...++++.+++|+.-.. ..| .+.+...+.|..+
T Consensus        82 -v~~-vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~  124 (478)
T 1pgj_A           82 -TDS-TIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRF  124 (478)
T ss_dssp             -HHH-HHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEE
T ss_pred             -HHH-HHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeE
Confidence             000 011  12355677888876432 233 3334444556543

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.34  E-value=0.0017  Score=70.65  Aligned_cols=37  Identities=16%  Similarity=0.287  Sum_probs=34.2

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  417 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~  417 (534)
                      .+++++|+|+|+||+|.+++..|+..|+ +|+|++++.
T Consensus       323 kL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          323 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            5778999999999999999999999999 999999864

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.34  E-value=0.0026  Score=64.91  Aligned_cols=112  Identities=14%  Similarity=0.147  Sum_probs=72.7

Q ss_pred             cEEEEEcCchhHHHHHHHHHHC-CCeE-EEEeCCHHHHHHHHHHHcCcc-cccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAK-GARV-VIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~-G~~v-~i~~R~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      .++.|+|+|.+|+..+.+|.+. |++| .+++|+.++++++++.++... .+++++-+  ...+|+|+.+||...+.   
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~--~~~~D~V~i~tp~~~h~---   80 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLA--REDVEMVIITVPNDKHA---   80 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHH--CSSCCEEEECSCTTSHH---
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhc--CCCCCEEEEeCChHHHH---
Confidence            4799999999999999999887 6774 589999999999999887543 23333221  24689999999864321   


Q ss_pred             CCCCCccccCCCC-EEEEEecCCC------hhHHHHHHHHCCCeEeccHHHH
Q 009464          462 ETPIPKHALGHYA-LVFDAVYTPK------ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       462 ~~~i~~~~l~~~~-~v~Dv~y~p~------~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                        ++-...++.+. ++++   +|.      ...+.+.|++.|..+.-|...-
T Consensus        81 --~~~~~al~~gk~vl~E---KP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R  127 (354)
T 3db2_A           81 --EVIEQCARSGKHIYVE---KPISVSLDHAQRIDQVIKETGVKFLCGHSSR  127 (354)
T ss_dssp             --HHHHHHHHTTCEEEEE---SSSCSSHHHHHHHHHHHHHHCCCEEEECGGG
T ss_pred             --HHHHHHHHcCCEEEEc---cCCCCCHHHHHHHHHHHHHcCCeEEEeechh
Confidence              11122333333 3333   332      2356666777777665555443

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=96.33  E-value=0.0017  Score=64.25  Aligned_cols=111  Identities=16%  Similarity=0.231  Sum_probs=66.0

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCC-C
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET-P  464 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~-~  464 (534)
                      ++.|+|+|.+|.+++..|.+.|.+|++++|+.++++.+.+. +...  ..+..+ ....+|+||.++|....-. ... .
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~--~~~~~~-~~~~~Dvvi~~vp~~~~~~-~v~~~   76 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDA-GEQV--VSSPAD-VAEKADRIITMLPTSINAI-EAYSG   76 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTT-TCEE--CSSHHH-HHHHCSEEEECCSSHHHHH-HHHHS
T ss_pred             eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCee--cCCHHH-HHhcCCEEEEeCCCHHHHH-HHHhC
Confidence            58899999999999999999999999999999998877653 2111  112222 1234799998886321100 000 0


Q ss_pred             CC--ccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEec
Q 009464          465 IP--KHALGHYALVFDAVYTPKIT--RLLREAEESGATIVS  501 (534)
Q Consensus       465 i~--~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii~  501 (534)
                      +.  ...++++.+++|.+-.+..+  .+.+...+.|...++
T Consensus        77 ~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~  117 (296)
T 2gf2_A           77 ANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMD  117 (296)
T ss_dssp             TTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             chhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            10  11345667888854333322  222334455654443

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.33  E-value=0.0041  Score=63.56  Aligned_cols=71  Identities=20%  Similarity=0.263  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc---ccccCCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD---LENFNPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~---~~~~~~~~~divVn~t~~  454 (534)
                      .|.+++|+|+|++|..++..+...|++|+++.++.++.+.+.++++.+. .+..+   +.+ ....+|+++++++.
T Consensus       180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~-~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSE-LADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHH-STTTEEEEEECCCS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHH-hcCCCCEEEECCCC
Confidence            5789999999999999999888899999999999888766654666432 22221   222 23468999999874

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.32  E-value=0.0032  Score=66.85  Aligned_cols=69  Identities=25%  Similarity=0.331  Sum_probs=56.5

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-----ccccccccccCCCCceEEEEcCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-----~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      -+++|+|+|-+|+.+|..|.+.|.+|+++++++++++.+.+.++..     +.+.+-+.++....+|++|.+|+
T Consensus         4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~   77 (461)
T 4g65_A            4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTN   77 (461)
T ss_dssp             EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence            4799999999999999999999999999999999999999887643     22333344435678999998876

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.32  E-value=0.0082  Score=60.88  Aligned_cols=71  Identities=25%  Similarity=0.348  Sum_probs=51.7

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccc-ccc----ccc-CCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSL-ADL----ENF-NPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~-~~~----~~~-~~~~~divVn~t~~  454 (534)
                      .|++++|+|+ |++|.+++..+...|++|+++.|+.++.+ ++++++... .+. +++    .+. ....+|+++||++.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE-FVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch
Confidence            5789999999 99999999999999999999999988875 445566432 111 111    111 12369999999874

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.32  E-value=0.0074  Score=60.76  Aligned_cols=75  Identities=19%  Similarity=0.259  Sum_probs=54.6

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc------ccc-ccccccCCCCceEEEEcCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA------LSL-ADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~------~~~-~~~~~~~~~~~divVn~t~~  454 (534)
                      .+++.|+|+|.+|.++++.|+..|.  +|++++++.++++..+..+....      ..+ .+..+ .+..+|+||.++++
T Consensus         6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~-al~~aDvViia~~~   84 (316)
T 1ldn_A            6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD-DCRDADLVVICAGA   84 (316)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG-GTTTCSEEEECCSC
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHH-HhCCCCEEEEcCCC
Confidence            3689999999999999999998885  89999999987776655442110      001 11222 45679999999998


Q ss_pred             CCCCC
Q 009464          455 GMQPK  459 (534)
Q Consensus       455 g~~~~  459 (534)
                      +..|.
T Consensus        85 ~~~~g   89 (316)
T 1ldn_A           85 NQKPG   89 (316)
T ss_dssp             CCCTT
T ss_pred             CCCCC
Confidence            87654

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.32  E-value=0.0099  Score=59.47  Aligned_cols=71  Identities=24%  Similarity=0.352  Sum_probs=50.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc-------cccccccccCCCCceEEEEcCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LSLADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~-------~~~~~~~~~~~~~~divVn~t~~g~  456 (534)
                      ++.|+|+|.+|.++++.|+..|.  +|++++++.++++..+..+....       ....+. + ....+|+||.+++...
T Consensus         2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~-a~~~aDvVIi~~~~~~   79 (304)
T 2v6b_A            2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH-S-ELADAQVVILTAGANQ   79 (304)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG-G-GGTTCSEEEECC----
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH-H-HhCCCCEEEEcCCCCC
Confidence            68999999999999999999998  89999999998887766664211       111222 2 3567899999997655


Q ss_pred             CC
Q 009464          457 QP  458 (534)
Q Consensus       457 ~~  458 (534)
                      .|
T Consensus        80 ~~   81 (304)
T 2v6b_A           80 KP   81 (304)
T ss_dssp             --
T ss_pred             CC
Confidence            43

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.32  E-value=0.0022  Score=64.29  Aligned_cols=112  Identities=16%  Similarity=0.071  Sum_probs=68.6

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCC-
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET-  463 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~-  463 (534)
                      +++.|+|+|.+|.+++..|.+.|.+|++++|+.++++++.+ .+...  ..+..+ ....+|+||.+++-...-. ... 
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~--~~~~~~-~~~~~DvVi~av~~~~~~~-~v~~  105 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-EGARL--GRTPAE-VVSTCDITFACVSDPKAAK-DLVL  105 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-TTCEE--CSCHHH-HHHHCSEEEECCSSHHHHH-HHHH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-cCCEE--cCCHHH-HHhcCCEEEEeCCCHHHHH-HHHc
Confidence            57999999999999999999999999999999999887765 22211  112222 2235799999887321000 000 


Q ss_pred             CCC--ccccCCCCEEEEEecCCCh--hHHHHHHHHCCCeEec
Q 009464          464 PIP--KHALGHYALVFDAVYTPKI--TRLLREAEESGATIVS  501 (534)
Q Consensus       464 ~i~--~~~l~~~~~v~Dv~y~p~~--T~ll~~A~~~G~~ii~  501 (534)
                      .+.  ...+.++.+++|+.-....  ..+.+...+.|..++.
T Consensus       106 ~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~  147 (316)
T 2uyy_A          106 GPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLE  147 (316)
T ss_dssp             STTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             CchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            000  1235566788888643322  2333444455665543

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=96.32  E-value=0.0022  Score=65.79  Aligned_cols=41  Identities=29%  Similarity=0.310  Sum_probs=38.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      ++.|+|+|.+|.+++..|++.|.+|++++|+.++++.+.+.
T Consensus        17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~   57 (366)
T 1evy_A           17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   57 (366)
T ss_dssp             EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHH
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc
Confidence            79999999999999999999999999999999999888765

>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A

Probab=96.28  E-value=0.044  Score=57.11  Aligned_cols=133  Identities=20%  Similarity=0.263  Sum_probs=83.2

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeE-EEEeCC----------HHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARV-VIANRT----------YDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v-~i~~R~----------~~~a~~la~  425 (534)
                      +.|.+.+++..++..       +.++++++++|-|.|.+|..++..|.++|++| .|.+.+          .+.+.++.+
T Consensus       201 g~Gv~~~~~~~~~~~-------g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~  273 (424)
T 3k92_A          201 AQGVTICIEEAVKKK-------GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRD  273 (424)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHc-------CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHH
Confidence            567777776655431       35688999999999999999999999999975 577776          566555544


Q ss_pred             HHcCcccccc--cc--cccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEec
Q 009464          426 TVGGHALSLA--DL--ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS  501 (534)
Q Consensus       426 ~~~~~~~~~~--~~--~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~  501 (534)
                      +.+ ....+.  .+  .++....+||++-|+.-+.-   +...  ...+ ...+|..-.-.|.....-+..+++|+.+++
T Consensus       274 ~~g-~i~~~~a~~~~~~~i~~~~~DIliPcA~~n~I---~~~~--a~~l-~ak~V~EgAN~p~t~eA~~iL~~rGI~~~P  346 (424)
T 3k92_A          274 SFG-MVTNLFTDVITNEELLEKDCDILVPAAISNQI---TAKN--AHNI-QASIVVERANGPTTIDATKILNERGVLLVP  346 (424)
T ss_dssp             SSS-CCGGGCSCCBCHHHHHHSCCSEEEECSCSSCB---CTTT--GGGC-CCSEEECCSSSCBCHHHHHHHHHTTCEEEC
T ss_pred             HhC-CCCCCCcEEecCccceeccccEEeecCccccc---Chhh--Hhhc-CceEEEcCCCCCCCHHHHHHHHHCCCEEEC
Confidence            322 111110  00  01011358999998864321   1111  1223 447888888888633444555778987776


Q ss_pred             cH
Q 009464          502 GL  503 (534)
Q Consensus       502 Gl  503 (534)
                      ..
T Consensus       347 D~  348 (424)
T 3k92_A          347 DI  348 (424)
T ss_dssp             HH
T ss_pred             ch
Confidence            43

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.24  E-value=0.0055  Score=62.05  Aligned_cols=70  Identities=20%  Similarity=0.205  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccc--cc----cccCCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA--DL----ENFNPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~--~~----~~~~~~~~divVn~t~~  454 (534)
                      .|++++|+|+|++|.+++..+...|++|++++|+.++.+.+ ++++... .+..  ++    .+.. ..+|++|++++.
T Consensus       164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~~d~~~~~~~~~~~~~~-~~~d~vid~~g~  240 (339)
T 1rjw_A          164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLVVNPLKEDAAKFMKEKV-GGVHAAVVTAVS  240 (339)
T ss_dssp             TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEEECTTTSCHHHHHHHHH-SSEEEEEESSCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEecCCCccHHHHHHHHh-CCCCEEEECCCC
Confidence            47899999999999999999999999999999999887655 4566432 2221  11    1101 468999999874

>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}

Probab=96.24  E-value=0.033  Score=58.16  Aligned_cols=133  Identities=14%  Similarity=0.214  Sum_probs=79.6

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEE-EEeCC---------------HHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT---------------YDRA  420 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~-i~~R~---------------~~~a  420 (534)
                      +.|.+.+++..++..       +.++++++++|.|.|.+|+.++..|.+.|++|+ +.+.+               .+.+
T Consensus       192 g~Gv~~~~~~~~~~~-------g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l  264 (421)
T 2yfq_A          192 GFGVAVVVRESAKRF-------GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKEL  264 (421)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHH
T ss_pred             HHHHHHHHHHHHHhc-------CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHH
Confidence            567777776655431       357889999999999999999999999999876 77777               2666


Q ss_pred             HHHHHHHcCcccccc---cc--cccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHC
Q 009464          421 RELAETVGGHALSLA---DL--ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES  495 (534)
Q Consensus       421 ~~la~~~~~~~~~~~---~~--~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~  495 (534)
                      .++.+..+. ...+.   .+  .++....+|+++.|+.-+.   .+..  +...+ ...+|.+.+-.|.....-+..+++
T Consensus       265 ~~~~~~~g~-i~~~~~a~~i~~~~~~~~~~DIliP~A~~n~---i~~~--~A~~l-~ak~VvEgAN~P~t~ea~~il~~~  337 (421)
T 2yfq_A          265 LAYKEANKT-LIGFPGAERITDEEFWTKEYDIIVPAALENV---ITGE--RAKTI-NAKLVCEAANGPTTPEGDKVLTER  337 (421)
T ss_dssp             HHHHHHHCC----------------------CEEECSCSSC---SCHH--HHTTC-CCSEEECCSSSCSCHHHHHHHHHH
T ss_pred             HHHHHhcCC-cccCCCceEeCccchhcCCccEEEEcCCcCc---CCcc--cHHHc-CCeEEEeCCccccCHHHHHHHHHC
Confidence            666665431 11110   00  1111235899999875221   1111  11223 457888888777543444445677


Q ss_pred             CCeEeccH
Q 009464          496 GATIVSGL  503 (534)
Q Consensus       496 G~~ii~Gl  503 (534)
                      |+.++++.
T Consensus       338 GI~~~Pd~  345 (421)
T 2yfq_A          338 GINLTPDI  345 (421)
T ss_dssp             TCEEECHH
T ss_pred             CCEEEChH
Confidence            88877644

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.23  E-value=0.0084  Score=60.27  Aligned_cols=71  Identities=17%  Similarity=0.305  Sum_probs=51.8

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc------cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~~~-~~~~~divVn~t~  453 (534)
                      .|++++|+|+ |++|.+++..+...|++|+++.|+.++.+.+ ++++... .+..+      +.+. ....+|+++|+++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g  218 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA-KALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG  218 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCC
Confidence            4789999995 9999999999999999999999999887654 4566432 22211      1110 1236999999987


Q ss_pred             C
Q 009464          454 I  454 (534)
Q Consensus       454 ~  454 (534)
                      .
T Consensus       219 ~  219 (325)
T 3jyn_A          219 Q  219 (325)
T ss_dssp             G
T ss_pred             h
Confidence            4

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.23  E-value=0.0027  Score=64.60  Aligned_cols=35  Identities=29%  Similarity=0.251  Sum_probs=29.7

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      |+++|+|+ |++|++++..|.+.|++|++++|+.++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            68999998 999999999999999999999998654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.23  E-value=0.0011  Score=66.05  Aligned_cols=68  Identities=15%  Similarity=0.113  Sum_probs=46.0

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--ccccc---ccccCC--CCceEEEEcCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNP--EDGMILANTTS  453 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~~~--~~~divVn~t~  453 (534)
                      .+.+++||+|| |++|++++..|.+.|++|++++|+.++ +.    ++...  .++.+   +.+ ..  ..+|+|||+++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l~~~~~~~Dl~d~~~~~~-~~~~~~~d~vih~A~   83 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----PNVEMISLDIMDSQRVKK-VISDIKPDYIFHLAA   83 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----TTEEEEECCTTCHHHHHH-HHHHHCCSEEEECCS
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----ceeeEEECCCCCHHHHHH-HHHhcCCCEEEEcCc
Confidence            35689999999 999999999999999999999998664 21    11111  12222   212 11  23799999998


Q ss_pred             CC
Q 009464          454 IG  455 (534)
Q Consensus       454 ~g  455 (534)
                      ..
T Consensus        84 ~~   85 (321)
T 2pk3_A           84 KS   85 (321)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A

Probab=96.20  E-value=0.017  Score=61.89  Aligned_cols=95  Identities=17%  Similarity=0.239  Sum_probs=59.4

Q ss_pred             CCcEEEEEcCchhHHH-HHHHHHHCCCeEEEEeCCHHH-HHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          383 AGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDR-ARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       383 ~~k~vlVlGaGG~gra-ia~~L~~~G~~v~i~~R~~~~-a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      +.|++.|+|.||+|.+ +|..|.++|++|+++++.... .+.|. ..+.... ...-.+ .+..+|+||-+.+       
T Consensus        21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~-~~gi~~~-~g~~~~-~~~~~d~vV~Spg-------   90 (494)
T 4hv4_A           21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLT-ALGAQIY-FHHRPE-NVLDASVVVVSTA-------   90 (494)
T ss_dssp             -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCEEE-SSCCGG-GGTTCSEEEECTT-------
T ss_pred             cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHH-HCCCEEE-CCCCHH-HcCCCCEEEECCC-------
Confidence            3589999999999996 799999999999999976432 22222 2121110 000000 1122344443222       


Q ss_pred             CCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHHH
Q 009464          461 DETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIG  508 (534)
Q Consensus       461 ~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~  508 (534)
                                           -|...|.+..|+++|+.++.-.++|.+
T Consensus        91 ---------------------i~~~~p~~~~a~~~gi~v~~~~e~l~~  117 (494)
T 4hv4_A           91 ---------------------ISADNPEIVAAREARIPVIRRAEMLAE  117 (494)
T ss_dssp             ---------------------SCTTCHHHHHHHHTTCCEEEHHHHHHH
T ss_pred             ---------------------CCCCCHHHHHHHHCCCCEEcHHHHHHH
Confidence                                 133567889999999999999998865

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.19  E-value=0.011  Score=60.67  Aligned_cols=70  Identities=23%  Similarity=0.281  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc---ccccCCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD---LENFNPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~---~~~~~~~~~divVn~t~~  454 (534)
                      .|.+++|+|+|++|..++..+...|++|+++.++.++.+.+ ++++... .+..+   ..+ ....+|+++++++.
T Consensus       194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~-~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADEVVNSRNADEMAA-HLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSEEEETTCHHHHHT-TTTCEEEEEECCSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEEeccccHHHHHH-hhcCCCEEEECCCC
Confidence            47899999999999999999989999999999998887654 4576532 22211   222 22578999999874

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.17  E-value=0.013  Score=59.27  Aligned_cols=72  Identities=17%  Similarity=0.184  Sum_probs=53.1

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcC---------cccccccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG---------HALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~---------~~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      +++.|+|+|.+|.+++..|+..|. +|++++++.++++..+..+..         ......+. + .+..+|+||.+++.
T Consensus        15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~-al~~aD~VI~avg~   92 (328)
T 2hjr_A           15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-E-YLQNSDVVIITAGV   92 (328)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-G-GGTTCSEEEECCSC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-H-HHCCCCEEEEcCCC
Confidence            589999999999999999999998 999999999888765433321         11111334 3 35678999999976


Q ss_pred             CCCC
Q 009464          455 GMQP  458 (534)
Q Consensus       455 g~~~  458 (534)
                      ...|
T Consensus        93 p~k~   96 (328)
T 2hjr_A           93 PRKP   96 (328)
T ss_dssp             CCCT
T ss_pred             CCCC
Confidence            5443

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.13  E-value=0.0069  Score=61.42  Aligned_cols=74  Identities=18%  Similarity=0.179  Sum_probs=53.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcC------ccccc---ccccccCCCCceEEEEcCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG------HALSL---ADLENFNPEDGMILANTTS  453 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~------~~~~~---~~~~~~~~~~~divVn~t~  453 (534)
                      ..++.|+|+|.+|.+++..|+..|. +|++++++.++++..+..+..      ....+   .++.+ ....+|+||.+++
T Consensus         9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~e-a~~~aDiVi~a~g   87 (331)
T 1pzg_A            9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEA-ALTGADCVIVTAG   87 (331)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHH-HHTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHH-HhCCCCEEEEccC
Confidence            3589999999999999999999998 999999999888775443321      01111   33433 3457899999997


Q ss_pred             CCCCC
Q 009464          454 IGMQP  458 (534)
Q Consensus       454 ~g~~~  458 (534)
                      ....+
T Consensus        88 ~p~~~   92 (331)
T 1pzg_A           88 LTKVP   92 (331)
T ss_dssp             CSSCT
T ss_pred             CCCCC
Confidence            66544

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=96.13  E-value=0.0071  Score=64.99  Aligned_cols=64  Identities=14%  Similarity=0.142  Sum_probs=47.7

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc-ccccCCCCceEEEEcCCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD-LENFNPEDGMILANTTSIG  455 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~-~~~~~~~~~divVn~t~~g  455 (534)
                      +++|||+|| |.+|++++..|.+.|++|+++.|+.++.+.    +   ..+..+ +.+ .+.++|+|||+++..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~----v---~~d~~~~~~~-~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK----R---FWDPLNPASD-LLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC----E---ECCTTSCCTT-TTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc----e---eecccchhHH-hcCCCCEEEECCCCc
Confidence            579999998 999999999999999999999998765311    1   112222 223 456789999998764

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=96.12  E-value=0.0029  Score=66.06  Aligned_cols=116  Identities=16%  Similarity=0.140  Sum_probs=72.1

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.||++.|+|.|.+|+.+|..+...|.+|+.++|+....      .+ ......++.+ .+..+|+|+.++|....  
T Consensus       141 ~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~------~~-~~~~~~~l~e-ll~~aDvV~l~~P~t~~--  210 (404)
T 1sc6_A          141 FEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP------LG-NATQVQHLSD-LLNMSDVVSLHVPENPS--  210 (404)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC------CT-TCEECSCHHH-HHHHCSEEEECCCSSTT--
T ss_pred             cccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc------cC-CceecCCHHH-HHhcCCEEEEccCCChH--
Confidence            46889999999999999999999999999999999975421      11 0111112222 23357999988886421  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                      + ...+..   ..++++.+++|+.-.+. .+.-+..|.+.|...--|++.+
T Consensus       211 t-~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf  260 (404)
T 1sc6_A          211 T-KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVF  260 (404)
T ss_dssp             T-TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC-
T ss_pred             H-HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeec
Confidence            1 112333   23567778888876543 4555555555553222344433

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.11  E-value=0.018  Score=59.07  Aligned_cols=71  Identities=27%  Similarity=0.435  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-cccc--c----ccc---cCCCCceEEEEc
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLA--D----LEN---FNPEDGMILANT  451 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~--~----~~~---~~~~~~divVn~  451 (534)
                      .|++++|+|+|++|.+++..+...|+ +|++++++.++.+ ++++++... .+..  +    +.+   ...+.+|+++++
T Consensus       182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~  260 (370)
T 4ej6_A          182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIEC  260 (370)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEEC
Confidence            47899999999999999999999999 8999999988865 667777542 2211  1    111   122369999999


Q ss_pred             CCC
Q 009464          452 TSI  454 (534)
Q Consensus       452 t~~  454 (534)
                      ++.
T Consensus       261 ~G~  263 (370)
T 4ej6_A          261 AGV  263 (370)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            874

>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A

Probab=96.10  E-value=0.23  Score=51.86  Aligned_cols=130  Identities=19%  Similarity=0.193  Sum_probs=77.3

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccc-cCCcEEEEEcCchhHHHHHHHHHH-CCCeEEEEeCC-----------HHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSA-LAGKLFVVIGAGGAGKALAYGAKA-KGARVVIANRT-----------YDRAREL  423 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~-l~~k~vlVlGaGG~graia~~L~~-~G~~v~i~~R~-----------~~~a~~l  423 (534)
                      +.|.+.+++..++.       .+.+ +++|++.|+|.|.+|+.+|..|.. .|++|+.+++.           .+.+.++
T Consensus       191 g~Gv~~~~~~~~~~-------~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~~~gvdl~~L~~~  263 (419)
T 1gtm_A          191 ARGASYTIREAAKV-------LGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKW  263 (419)
T ss_dssp             HHHHHHHHHHHHHH-------TTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHH
T ss_pred             hhHHHHHHHHHHHH-------hCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccccCccCCCHHHHHHH
Confidence            56777776665543       1356 899999999999999999999999 99998877543           4555554


Q ss_pred             HHHHcC-------cccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHH-HHHHHHC
Q 009464          424 AETVGG-------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL-LREAEES  495 (534)
Q Consensus       424 a~~~~~-------~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~l-l~~A~~~  495 (534)
                      ++....       +.++-+++..   .+.|++|||+--+.   .+...  ...|+. ..+....-.|. |+- -...+..
T Consensus       264 ~d~~~~l~~l~~t~~i~~~~l~~---mk~dilIn~ArG~~---Vde~a--~~aL~~-~~I~~aAneP~-t~~a~~ll~~~  333 (419)
T 1gtm_A          264 KNEHGSVKDFPGATNITNEELLE---LEVDVLAPAAIEEV---ITKKN--ADNIKA-KIVAEVANGPV-TPEADEILFEK  333 (419)
T ss_dssp             HHHHSSSTTCTTSEEECHHHHHH---SCCSEEEECSCSCC---BCTTG--GGGCCC-SEEECCSSSCB-CHHHHHHHHHT
T ss_pred             HHhcCEeecCccCeeeCHHHHHh---CCCCEEEECCCccc---CCHHH--HHHhcC-CEEEEeeCCCC-CcchHHHHhcC
Confidence            443211       0111111222   23589999874222   22222  234433 45666654453 322 2334567


Q ss_pred             CCeEeccH
Q 009464          496 GATIVSGL  503 (534)
Q Consensus       496 G~~ii~Gl  503 (534)
                      |+.+.+..
T Consensus       334 ~V~itPhi  341 (419)
T 1gtm_A          334 GILQIPDF  341 (419)
T ss_dssp             TCEEECHH
T ss_pred             CEEEECch
Confidence            87777655

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=96.10  E-value=0.00071  Score=68.18  Aligned_cols=72  Identities=18%  Similarity=0.219  Sum_probs=49.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHcCcc----ccccc---ccccCC-C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKG-------ARVVIANRTYDRARELAETVGGHA----LSLAD---LENFNP-E  443 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G-------~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~~~-~  443 (534)
                      ..+++++++|+|+ |++|++++..|.+.|       ++|++++|+.++...   ......    .++.+   +.+ .. .
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~-~~~~   85 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---GFSGAVDARAADLSAPGEAEK-LVEA   85 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---TCCSEEEEEECCTTSTTHHHH-HHHT
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---ccCCceeEEEcCCCCHHHHHH-HHhc
Confidence            4567899999998 999999999999999       799999998643221   001111    12222   111 12 4


Q ss_pred             CceEEEEcCCCC
Q 009464          444 DGMILANTTSIG  455 (534)
Q Consensus       444 ~~divVn~t~~g  455 (534)
                      .+|+|||+++..
T Consensus        86 ~~d~vih~A~~~   97 (342)
T 2hrz_A           86 RPDVIFHLAAIV   97 (342)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            689999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	534
d1gqna_	252	c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase	2e-71
d1sfla_	236	c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase	3e-70
d1p77a2	101	c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE	4e-28
d1vi2a2	102	c.58.1.5 (A:5-106) Putative shikimate dehydrogenas	6e-28
d1nyta2	101	c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE	6e-27
d1nvta2	110	c.58.1.5 (A:1-110) Shikimate 5-dehydrogenase AroE	6e-26
d1npya2	102	c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like	2e-25
d1npya1	167	c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like	5e-21
d1vi2a1	182	c.2.1.7 (A:107-288) Putative shikimate dehydrogena	1e-20
d1nyta1	170	c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE	1e-19
d1p77a1	171	c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE	2e-18
d1nvta1	177	c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE	3e-17
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	3e-07
d1gpja2	159	c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle	3e-07
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-06
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-06
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	5e-06
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	5e-06
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-06
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	9e-06
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-05
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-05
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-05
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-05
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-05
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-05
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-05
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	6e-05
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	8e-05
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	8e-05
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	9e-05
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-04
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-04
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-04
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-04
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-04
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-04
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-04
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-04
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-04
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-04
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-04
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	4e-04
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-04
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	5e-04
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-04
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	6e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-04
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	7e-04
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	7e-04
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	8e-04
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-04
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	9e-04
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	0.001
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.001
d2voua1	265	c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr	0.001
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	0.001
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	0.002
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	0.002
d1li4a1	163	c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolas	0.002
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	0.003
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	0.003
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	0.004

>d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]} Length = 252

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Type I 3-dehydroquinate dehydratase
species: Salmonella typhi [TaxId: 90370]

 Score =  226 bits (577), Expect = 2e-71
 Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 11/234 (4%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPV 78
             I V +MG  ++ +  +      +  D++E R+D   +    +++ T  +        +
Sbjct: 16  PKIIVSLMGRDINSVKAEALAYREATFDILEWRVDHFMDIASTQSVLTAARVIRDAMPDI 75

Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVA-REFNDSIRGKKPEK 136
           P LFT+R   EGG+        + + R A++ G  D ID+EL     +   ++       
Sbjct: 76  PLLFTFRSAKEGGEQTITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVKATVDYAHAHN 135

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH--SQV 194
             V++S+H++  TPS E++ + + ++QA GADI K A       DV  +   T+      
Sbjct: 136 VYVVMSNHDFHQTPSAEEMVSRLRKMQALGADIPKIAVMPQSKHDVLTLLTATLEMQQHY 195

Query: 195 SHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 248
           +  P+I + M + G+ISR+    FG   TFG ++    SAPGQ  + DL  +  
Sbjct: 196 ADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQA--SAPGQIAVNDLRSVLM 247

>d1sfla_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Staphylococcus aureus [TaxId: 1280]} Length = 236

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Type I 3-dehydroquinate dehydratase
species: Staphylococcus aureus [TaxId: 1280]

 Score =  222 bits (568), Expect = 3e-70
 Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 12/234 (5%)

Query: 26  ICVPIMGE-SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK----ESPVPT 80
           +   I  + S+++ ++          D++E+R+D  +N    +  + + K    +     
Sbjct: 4   VVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKL 63

Query: 81  LFTYRPIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREFNDS---IRGKKPEK 136
           L TYR   +GG      +  ++++  LA   G D ID+E Q   +       I   +   
Sbjct: 64  LVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYN 123

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT-VHSQVS 195
            +VI+S HN++ TP +++L  +  ++Q    + VK A    +  DV  + Q     S   
Sbjct: 124 KEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTM 183

Query: 196 HVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 249
              ++G+ M + GLISR     FGG LT+G +      APGQ  + DL      
Sbjct: 184 DCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEP--QAPGQIDVTDLKAQVTL 235

>d1p77a2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Length = 101

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

 Score =  105 bits (264), Expect = 4e-28
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 3/101 (2%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 314
            ++ + G P+  SKSP++ N+          ++  L D     +    +      G + T
Sbjct: 2   DLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNIT 61

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 355
            P KE A +  DE    AK   A N + +   DGKL+  NT
Sbjct: 62  SPFKERAYQLADEYSQRAKLAEACNTLKKLD-DGKLYADNT 101

>d1vi2a2 c.58.1.5 (A:5-106) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Length = 102

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

 Score =  105 bits (262), Expect = 6e-28
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 313
            ++ G++  P+ HS SP + N+A +  G    ++   VD        +   +    G   
Sbjct: 3   YELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGV 62

Query: 314 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 355
           ++P+K+ A +  DE+   AK +GA+N I+    DG L GYNT
Sbjct: 63  SMPNKQLACEYVDELTPAAKLVGAINTIVND--DGYLRGYNT 102

>d1nyta2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Length = 101

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

 Score =  102 bits (255), Expect = 6e-27
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)

Query: 257 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 314
           + + + G P+ HSKSP ++ +  + +     +  +L    D       + S    G + T
Sbjct: 2   ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVT 61

Query: 315 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 355
           +P KE A    DE+   A   GAVN ++R + DG+L G NT
Sbjct: 62  VPFKEEAFARADELTERAALAGAVNTLMRLE-DGRLLGDNT 101

>d1nvta2 c.58.1.5 (A:1-110) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 110

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 99.8 bits (248), Expect = 6e-26
 Identities = 47/106 (44%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 252 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 309
           +   TKV G+IG PV HS SPI++N AFK  G N V+V   V  +++        +    
Sbjct: 7   INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 66

Query: 310 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 355
           GF+ TIPHK   +K  DE+D  A+ IGAVN I     DGK  GYNT
Sbjct: 67  GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIE--DGKAIGYNT 110

>d1npya2 c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Length = 102

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

 Score = 98.1 bits (244), Expect = 2e-25
 Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 252 MGPDTKVF-GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 310
           +  DT++   + G+P   +     +N  +  +G N ++      DI    +   +    G
Sbjct: 2   INKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRG 59

Query: 311 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 355
            + ++P KE  +   DE+   A++I +VN I+    +G L  YNT
Sbjct: 60  CAVSMPFKETCMPFLDEIHPSAQAIESVNTIVND--NGFLRAYNT 102

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

 Score = 88.0 bits (217), Expect = 5e-21
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 20/180 (11%)

Query: 356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIAN 414
           DY+  +  IE     + +++            +V G+GG  KA+    K  G  ++ I  
Sbjct: 1   DYIAIVKLIE-----KYHLN-------KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYA 48

Query: 415 RTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGH 472
           R     + LA   G        + +   +   IL N TSIGM+   +E  +  PK  + +
Sbjct: 49  RNVKTGQYLAALYGYA-----YINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDN 103

Query: 473 YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMA 532
            ++ FD V  P  T  +R A+  G   +SG  + + QA EQ+E +T      EL  +  A
Sbjct: 104 ASVAFDVVAMPVETPFIRYAQARGKQTISGAAVIVLQAVEQFELYTHQRPSDELIAEAAA 163

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

 Score = 87.3 bits (215), Expect = 1e-20
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 24/190 (12%)

Query: 356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIAN 414
           D  G I AI++               + GK  V++GAGGA  A+      +G   + + N
Sbjct: 1   DGTGHIRAIKE-----SGFD------IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFN 49

Query: 415 RTYDRAREL---AETVGGHALSLADLENFNPEDGM--------ILANTTSIGMQPKVDET 463
           R  +   +    A+ V  +   +  + +   +           IL N T +GM+P  +E+
Sbjct: 50  RRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENES 109

Query: 464 PIPKHALGHY-ALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPA 522
            +   +L H   LV + VY P +T+LL++A+++G   + G  M + Q  EQ+  +TG   
Sbjct: 110 LVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDF 169

Query: 523 PKELFQKIMA 532
           P E  +++M 
Sbjct: 170 PLEYVKQVMG 179

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

 Score = 84.2 bits (207), Expect = 1e-19
 Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 15/180 (8%)

Query: 356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR 415
           D VG +S +E     RL+          G   ++IGAGGA + +     +    V I NR
Sbjct: 1   DGVGLLSDLE-----RLSFI------RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNR 49

Query: 416 TYDRARELAETVGGHALSLA-DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYA 474
           T  RA ELA+         A  ++     +  ++ N TS G+    D   IP   +    
Sbjct: 50  TVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG--DIPAIPSSLIHPGI 107

Query: 475 LVFDAVYTPKITRLLREAEESGATIVS-GLEMFIGQAYEQYERFTGLPAPKELFQKIMAK 533
             +D  Y    T  L   E+ G+   + GL M + QA   +  + G+    E   K + +
Sbjct: 108 YCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQE 167

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

 Score = 80.7 bits (198), Expect = 2e-18
 Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 16/182 (8%)

Query: 356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR 415
           D +G ++ ++     RLN           +  +++GAGGA K +          +V+ANR
Sbjct: 1   DGIGLVTDLQ-----RLNWL------RPNQHVLILGAGGATKGVLLPLLQAQQNIVLANR 49

Query: 416 TYDRARELAETVGGHALSLA-DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYA 474
           T+ + +ELAE    +    A  +++   +   ++ N TS G+        +    L   +
Sbjct: 50  TFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSG--GTASVDAEILKLGS 107

Query: 475 LVFDAVYT-PKITRLLREAEESGA-TIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMA 532
             +D  Y     T  +   +  G   +  G  M + QA   +  + G+        + + 
Sbjct: 108 AFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVAQAAHSFHLWRGVMPDFVSVYEQLK 167

Query: 533 KY 534
           K 
Sbjct: 168 KA 169

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 77.8 bits (190), Expect = 3e-17
 Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 19/185 (10%)

Query: 356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR 415
           D +GA  A+E+               +  K  V+ GAGGA +A+A+   AK   ++IANR
Sbjct: 1   DGIGARMALEE-----EIGR------VKDKNIVIYGAGGAARAVAFE-LAKDNNIIIANR 48

Query: 416 TYDRARELAETVGGHALSLADLENFN------PEDGMILANTTSIGMQPKVDETPIPKHA 469
           T ++A  LA+ +          E          +   I+ N T IGM P +D  PI K  
Sbjct: 49  TVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAE 108

Query: 470 L-GHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQ 528
                 +V D +Y P  T LL+EA++  A  ++GL M I Q    ++ +TG+    E+ +
Sbjct: 109 KLREDMVVMDLIYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMK 168

Query: 529 KIMAK 533
             +  
Sbjct: 169 NAIID 173

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 22/110 (20%), Positives = 41/110 (37%)

Query: 383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 442
           A K  +++G+G   +         G +V +A RT + A++L+  V        D+ +   
Sbjct: 1   ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAA 60

Query: 443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 492
            D  +  +   I + P      + K A+     V    Y       L +A
Sbjct: 61  LDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQA 110

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Length = 159

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

 Score = 48.2 bits (114), Expect = 3e-07
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 382 LAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENF 440
           L  K  +V+GAG  GK +A     +G   V++ANRTY+RA ELA  +GG A+   +L + 
Sbjct: 22  LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDH 81

Query: 441 NPE-DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTPKITRLLREAEESGAT 498
               D ++ A      +    D     +       ++  D      +   +   E+    
Sbjct: 82  LARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVENIEDVEVR 141

Query: 499 IVSGLEMFIGQAYEQYER 516
            +  L +   +  E+  +
Sbjct: 142 TIDDLRVIARENLERRRK 159

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 47.9 bits (113), Expect = 1e-06
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L GK  ++ G+  G G+A A     +GARV IA+   + AR  A  +G  A ++A
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIA 57

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 434
           L  K  ++ GA  G G+A       +GAR+V  +      RE AE VG H + +
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVM 56

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 5e-06
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 440
           LAG+  +V GAG G G+       A GARVV  +RT      L     G      DL ++
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW 64

Query: 441 N 441
            
Sbjct: 65  E 65

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 5e-06
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 439
            AGK+ VV G G G G  +       GARVVI ++     R L + + G    L D+  
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQ 62

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 45.1 bits (106), Expect = 8e-06
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 379 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           S  L GK+ +V G   G G +      A+GA+VV  +   +  + +A  +   A  + 
Sbjct: 1   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVH 58

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 44.7 bits (104), Expect = 9e-06
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 431
           ++ ++ G G  GK LA      G  +V+ +R  ++A   A      A
Sbjct: 2   RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA 48

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-ADLEN 439
           L+GK  +V GA  G G+A       +GA +V  +R      E    +   A+++ AD+ +
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD 62

Query: 440 FN 441
             
Sbjct: 63  PK 64

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L+GK  ++ G   G G   A  A A GARVV+A+   +     A  +G  A    
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQH 57

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 44.2 bits (104), Expect = 1e-05
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L GK+ +V G   G G  +      +GA+V  ++      ++LA  +G  ++ + 
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVR 58

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.2 bits (104), Expect = 1e-05
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 440
            +G   +V GAG G G+       A GA+VV   RT      LA+   G      DL ++
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW 62

Query: 441 N 441
           +
Sbjct: 63  D 63

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
           L G+  ++ G   G G+AL     A+GA+V + +++ +R  EL    G + L + 
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIV 57

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 43.2 bits (101), Expect = 3e-05
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 435
             GK+ +V GA  G G+A+A    A+GA+V+    + + A+ +++ +G +   L 
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLM 56

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL-AD 436
           L GK  ++ GAG G GK +A      GA VV+++   D A  + + +   GG A +   D
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 437 LEN 439
           + +
Sbjct: 69  ITS 71

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 6e-05
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 430
           + G++ ++ GAG G G+  AY      +++V+ +       E A    G 
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL 54

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.1 bits (99), Expect = 6e-05
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 439
            AGK  +V G   G G+A+A     +GA V + +      +E+AE +GG      DLE+
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAEAIGGAFFQ-VDLED 59

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 8e-05
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 430
           + G + V+ G   G G A A     +GA  V+ +         A+ +G +
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN 52

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.3 bits (99), Expect = 8e-05
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 427
            +GK  ++ G+  G G++ A     +GA+V I  R  DR  E  + +
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQI 48

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 9e-05
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 431
           L GK+ ++  A  G G+A A     +GA+V+  +    + +EL +  G   
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQT 54

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 379 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG 428
           S+ L GK+ ++ G   G G A+A     +GA+V+I  R  D   + A++VG
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG 51

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHALSL-A 435
           L G++ +V G   G G  +A G    G  VV+A+R  +     A++L E  G   ++   
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 436 DLENFN 441
           D+ N+ 
Sbjct: 63  DVSNYE 68

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG 429
           L G++ +V G   G GKA+       G+ VVIA+R  +R +  A+ +  
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQA 58

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 430
           L  K+ ++ G   G G+  A      GA+VVIA+   D  +++   +G  
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP 53

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL-AD 436
             GK+ +V GAG   G A A     +G  + + +   +   +   +V   G  A S   D
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62

Query: 437 LENFN 441
           + +  
Sbjct: 63  VTSEE 67

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAE 425
             GK+  + G G G GK +     + GA+ VIA+R  D  +  AE
Sbjct: 23  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE 67

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.5 bits (94), Expect = 3e-04
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 379 SSALAGKLFVVIGAG-GAGKALAYG---AKAKGARVVIANRTYDRARELAETVGG 429
           +  L   + V+ GA  G G+ALA       + G+ ++++ R+    R+L E +G 
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGA 55

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 40.5 bits (94), Expect = 3e-04
 Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 432
           L G   +V G   G G A+       GARV   +R      E  E      L
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL 55

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 40.5 bits (94), Expect = 3e-04
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG 428
              K  +V G   G G A      A GA V +  R+   A E+ E VG
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVG 54

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 427
            A K+ ++ G+  G G+A A     +GA+V I  R  +R  E  + +
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQI 49

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 433
            + K  ++ G+  G G+  A     +GA V I  R+ +R  E  + +    +S
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS 55

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 39.7 bits (91), Expect = 4e-04
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 382 LAGKLFVVIGAGGA---GKALAYGAKAKGARVVIANRTYDR-ARELAETVGGHALSL 434
           L GK  +V G          +A  A+ +GA++V+      R  + + + +   A  L
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLL 60

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 5e-04
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAE 425
           L GK  +V GA  G G+ +AY     GA VV+  R+ +  +++  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS 56

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (92), Expect = 5e-04
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAE 425
              +L +V GA  G G A+A     +G +VV   RT     ELA 
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAA 52

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.5 bits (91), Expect = 6e-04
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 438
           +GK+ V  G G  G A+    K  G  V+  + + +   +    V G+       +
Sbjct: 2   SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQ 57

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 39.3 bits (91), Expect = 6e-04
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 431
              ++ ++ G G G G+A A    A+GA++ + + + +        V   A
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA 52

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 10/51 (19%), Positives = 15/51 (29%), Gaps = 1/51 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 431
           L G   +V G   G G  +     + GA V   +R      +         
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG 56

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 39.1 bits (91), Expect = 7e-04
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSL-ADLE 438
           L  KL V+ G   G G+A+A     +GA + IA+      A      +G   L++  D+ 
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 62

Query: 439 N 439
            
Sbjct: 63  Q 63

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.2 bits (91), Expect = 7e-04
 Identities = 11/53 (20%), Positives = 14/53 (26%), Gaps = 1/53 (1%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 433
           L  K  +V G   G G A+       GA +    R      E           
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 58

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 39.0 bits (90), Expect = 8e-04
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 379 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 427
           S  LAGK+ +  GAG G G+ +A     +GA VV+    Y  + + AE V
Sbjct: 1   SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVV---NYGSSSKAAEEV 47

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 38.9 bits (90), Expect = 8e-04
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 439
           +  K  +V+ A  G G+A+A     +GA V I  R  +  +       GH   + DL  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----GHRYVVCDLRK 55

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 39.0 bits (90), Expect = 9e-04
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 385 KLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL-ADLEN 439
           K+ +V GAG G GKA+A      G  V IA+     A+ +A  +   GGHA+++  D+ +
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE 425
           L  K  + + A GG G   +     +  +  +     +    LAE
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE 47

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 435
              K+ +V GAG G G+ +A       + V+  +RT      + + +   G  +   A
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

 Score = 38.2 bits (87), Expect = 0.001
 Identities = 15/114 (13%), Positives = 32/114 (28%)

Query: 388 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 447
            V+G   +G   A   +  G  V +  R+          +      +  L     E   I
Sbjct: 8   AVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSI 67

Query: 448 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 501
              ++S+     +    +           +D++Y         E   +   +V 
Sbjct: 68  SVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVG 121

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 5/58 (8%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 438
              +  +V G   G G A+A    A G +V +      R     + + G  + + D +
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVT----HRGSGAPKGLFGVEVDVTDSD 58

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 38.2 bits (88), Expect = 0.002
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 376 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 427
           G  S++L GK+ +V GAG G G+ +A     +G +V++    Y  + E AE V
Sbjct: 10  GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIV---NYANSTESAEEV 59

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)

Query: 382 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTY-DRARELAETV---GGHALSLA 435
           L GK+ V+ G+  G GK++A     + A+VV+  R+  D A  + E +   GG A+++ 
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 163

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (85), Expect = 0.002
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 366 DGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRA 420
           DG++   +V       +AGK+ VV G G  GK  A   +  GARV+I       A
Sbjct: 12  DGIKRATDVM------IAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINA 60

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 37.4 bits (86), Expect = 0.003
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 5/63 (7%)

Query: 384 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL-ADLE 438
            ++ +V GA  G G  +A     +G RV +  R  +  R   + +   G  A     D+ 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 439 NFN 441
           +  
Sbjct: 62  SVP 64

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 37.6 bits (86), Expect = 0.003
 Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 3/47 (6%)

Query: 382 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRARELAE 425
           L+GK  +V G          +A     +GA +    +       + E
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE 49

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 384 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG 428
           GK+ +V GA  G G+A A     KGA+V + +   +   +    + 
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH 48

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	534
d1gqna_	252	Type I 3-dehydroquinate dehydratase {Salmonella ty	100.0
d1sfla_	236	Type I 3-dehydroquinate dehydratase {Staphylococcu	100.0
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	100.0
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	100.0
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	100.0
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	100.0
d1p77a2	101	Shikimate 5-dehydrogenase AroE {Haemophilus influe	100.0
d1vi2a2	102	Putative shikimate dehydrogenase YdiB {Escherichia	100.0
d1nyta2	101	Shikimate 5-dehydrogenase AroE {Escherichia coli [	99.98
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	99.97
d1nvta2	110	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	99.97
d1npya2	102	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	99.96
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.31
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	99.26
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.85
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.83
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.82
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.81
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.79
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.78
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.77
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.76
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.7
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.7
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.69
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.69
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.69
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.69
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.64
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.64
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.63
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.62
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.62
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.61
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.6
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.6
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.59
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.57
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.54
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.54
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.53
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.53
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.53
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.51
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.5
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.49
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.48
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.48
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.47
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.46
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.44
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.44
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.41
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	98.4
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	98.37
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.35
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.27
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.26
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.26
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.24
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.21
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.18
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.14
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	98.12
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.01
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	98.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	98.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.98
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.96
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.9
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.88
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.85
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.78
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.75
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.74
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	97.71
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.7
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.68
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	97.67
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.59
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.57
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.57
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.57
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	97.57
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.53
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.46
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.46
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	97.46
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.44
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.42
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.41
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.39
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	97.36
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.35
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.33
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.32
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	97.32
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.31
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.29
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.28
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.25
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.21
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.19
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	97.18
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.17
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.16
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	97.16
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.15
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.14
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.14
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.11
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.09
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.09
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.07
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.06
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.06
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	97.05
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.02
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.01
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.0
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.99
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	96.97
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.95
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.93
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.92
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.9
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.88
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	96.85
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.83
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.83
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.83
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.81
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.78
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.76
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.75
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.75
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.75
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	96.75
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.71
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.66
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.65
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.65
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.64
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.57
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.53
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.5
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	96.46
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.45
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.43
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.42
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.41
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.41
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.37
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.36
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.35
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	96.32
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.29
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.22
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	96.21
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.2
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	96.18
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.18
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	96.14
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.14
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.13
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.1
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.1
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.1
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.01
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	95.98
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.96
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.95
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.94
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	95.92
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.9
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	95.83
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.59
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.58
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.53
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	95.45
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.33
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.28
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	95.16
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.09
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.08
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.03
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.95
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.9
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	94.86
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	94.82
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	94.75
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.69
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	94.62
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.58
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.56
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.56
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	94.49
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	94.47
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	94.45
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.4
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.39
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.39
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	94.36
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.35
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	94.35
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.34
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.2
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.12
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.09
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.09
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.08
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.05
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	94.03
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.92
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.86
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	93.85
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.84
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.68
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.65
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.64
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.63
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.61
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	93.55
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	93.54
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.52
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.51
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.43
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	93.36
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.32
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	93.29
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.96
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.85
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	92.77
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	92.74
d1xi3a_	206	Thiamin phosphate synthase {Archaeon (Pyrococcus f	92.72
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.71
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.6
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	92.57
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.5
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	92.41
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.28
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	92.25
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.16
d1ub3a_	211	Deoxyribose-phosphate aldolase DeoC {Thermus therm	92.11
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.1
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.08
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.07
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	92.03
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.02
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	91.78
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.7
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	91.66
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	91.62
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.59
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	91.58
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	91.52
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	91.52
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.37
d1ad1a_	264	Dihydropteroate synthetase {Staphylococcus aureus	91.27
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	91.02
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	91.01
d1twda_	247	Copper homeostasis protein CutC {Shigella flexneri	90.99
d1yx1a1	250	Hypothetical protein PA2260 {Pseudomonas aeruginos	90.96
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	90.92
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	90.91
d1ojxa_	251	Archaeal fructose 1,6-bisphosphate aldolase {Archa	90.79
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	90.58
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	90.45
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.42
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.42
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	90.42
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	90.27
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	89.94
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.82
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.68
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	89.66
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	89.65
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.64
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	89.61
d2q02a1	271	Putative cytoplasmic protein STM4435 {Salmonella t	89.5
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	89.43
d1o0ya_	251	Deoxyribose-phosphate aldolase DeoC {Thermotoga ma	89.42
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	88.86
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.8
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	88.79
d1wa3a1	202	KDPG aldolase {Thermotoga maritima [TaxId: 2336]}	88.74
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	88.6
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	88.48
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	88.47
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	88.38
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	88.35
d1ajza_	282	Dihydropteroate synthetase {Escherichia coli [TaxI	88.22
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	88.09
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	87.81
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	87.8
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.77
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.7
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	87.68
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	87.51
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	87.49
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	87.25
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	87.21
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.1
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	86.97
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	86.67
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	86.59
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	86.57
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.52
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.24
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	86.08
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	85.78
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	85.78
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	85.72
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	85.59
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	84.73
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	84.72
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	84.37
d1ps9a1	330	2,4-dienoyl-CoA reductase, N-terminal domain {Esch	83.95
d1ad1a_	264	Dihydropteroate synthetase {Staphylococcus aureus	83.79
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.46
d1q6oa_	213	3-keto-L-gulonate 6-phosphate decarboxylase {Esche	82.97
d2gjca1	311	Thiazole biosynthetic enzyme Thi4 {Baker's yeast (	82.36
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	82.25
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	82.17
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	82.12
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	81.99
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	81.96
d1neka2	330	Succinate dehydogenase {Escherichia coli [TaxId: 5	81.82
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.63
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	81.59
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	81.51
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	81.25
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	81.25
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	80.79

>d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Type I 3-dehydroquinate dehydratase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=2.2e-56  Score=439.20  Aligned_cols=230  Identities=27%  Similarity=0.431  Sum_probs=206.9

Q ss_pred             CCCCCeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhh----HHHHHhhhC-CCcEEEEeccCCCCCCC
Q 009464           19 MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE----NIKTLIKES-PVPTLFTYRPIWEGGQY   93 (534)
Q Consensus        19 ~~~~~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~----~l~~l~~~~-~~PiI~T~R~~~eGG~~   93 (534)
                      +-..+|+|||||++++.+++++++..+...|||+||||+|+|.+..+.+    .+..+++.. ++|+|||+|+++|||.|
T Consensus        11 ~g~g~pkIcv~l~~~~~~~~~~~~~~~~~~~aD~vE~RlD~l~~~~~~~~l~~~~~~lr~~~~~~PiI~T~R~~~eGG~~   90 (252)
T d1gqna_          11 IGEGMPKIIVSLMGRDINSVKAEALAYREATFDILEWRVDHFMDIASTQSVLTAARVIRDAMPDIPLLFTFRSAKEGGEQ   90 (252)
T ss_dssp             ETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCSCTTCHHHHHHHHHHHHHHCTTSCEEEECCBGGGTCSB
T ss_pred             ecCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEEEccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCC
Confidence            3366899999999999999999999988899999999999998765433    344455554 69999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhC-CcEEEEeccccchhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEE
Q 009464           94 DGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVK  171 (534)
Q Consensus        94 ~~~~~~~~~~l~~~~~~~-~~~iDiEl~~~~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~K  171 (534)
                      .+++++|+++++.+++.| |||||||++..++.++++.. .++.++++|+|||||++||+.+++.+++++|.++||||+|
T Consensus        91 ~~~~~~~~~ll~~~~~~~~~d~iDiEl~~~~~~~~~li~~a~~~~~~vI~S~Hdf~~TP~~~~l~~~~~~m~~~gaDivK  170 (252)
T d1gqna_          91 TITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVKATVDYAHAHNVYVVMSNHDFHQTPSAEEMVSRLRKMQALGADIPK  170 (252)
T ss_dssp             CCCHHHHHHHHHHHHHHSCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred             CCCHHHHHHHHHHHHHcCCCceEeccccccHHHHHHHHHHhhcCCCeEEEEecCCCCCCCHHHHHHHHHHHHHhCCCeEE
Confidence            999999999999999999 89999999999887777764 3568999999999999999999999999999999999999


Q ss_pred             EEcccCCHHHHHHHHHHHhhc--cCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhhc
Q 009464          172 FATTALDITDVARVFQITVHS--QVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF  249 (534)
Q Consensus       172 ia~~~~~~~D~~~l~~~~~~~--~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~~  249 (534)
                      +|+||++.+|++++++++.+.  ...++|+|+|+||+.|++||+++++|||++||+++++  ++||||+++++|+++++.
T Consensus       171 ia~~a~~~~D~~~ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~tya~~~~--~sAPGQ~~~~~l~~~l~~  248 (252)
T d1gqna_         171 IAVMPQSKHDVLTLLTATLEMQQHYADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQ--ASAPGQIAVNDLRSVLMI  248 (252)
T ss_dssp             EEECCSSHHHHHHHHHHHHHHHHHTCSSCCEEEECTTTTHHHHHCHHHHTCCEEECBSSS--CCSTTCCBHHHHHHHHHH
T ss_pred             EEecCCCHHHHHHHHHHHHHHHHhCCCCCEEEEecCCcchhHHHHHHHhCCceEeccCCC--CCCCCCCCHHHHHHHHHH
Confidence            999999999999999998765  2357899999999999999999999999999999986  499999999999999875


Q ss_pred             c
Q 009464          250 R  250 (534)
Q Consensus       250 ~  250 (534)
                      .
T Consensus       249 l  249 (252)
T d1gqna_         249 L  249 (252)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1sfla_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Type I 3-dehydroquinate dehydratase
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=4.4e-51  Score=397.75  Aligned_cols=222  Identities=25%  Similarity=0.404  Sum_probs=185.9

Q ss_pred             EEEEeccCC-CHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhh---HHHHHhhh-CCCcEEEEeccCCCCCCCCCCHHH
Q 009464           25 LICVPIMGE-SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE---NIKTLIKE-SPVPTLFTYRPIWEGGQYDGDENE   99 (534)
Q Consensus        25 ~icv~l~~~-~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~---~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~   99 (534)
                      +||+|++.. +.++.+.+.-+....++|+||||+|+|.+.+..+   .+..+++. .++|+|||+|+++|||.+++++++
T Consensus         3 ~~~~~~~~~~~~e~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~v~~~~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~~   82 (236)
T d1sfla_           3 EVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDS   82 (236)
T ss_dssp             EEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHH
T ss_pred             cEEEecCCchhHHHHHHHHHHhcCcCCCEEEEEeccccCCCHHHHHHHHHHHHhcCCCCcEEEEEeCHHHCCCCCCCHHH
Confidence            688999999 6677654433344568999999999999876532   23333332 378999999999999999999999


Q ss_pred             HHHHHHHHHHh-CCcEEEEeccccchhhH--Hh-hccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Q 009464          100 RVDVLRLAMEL-GADYIDVELQVAREFND--SI-RGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATT  175 (534)
Q Consensus       100 ~~~~l~~~~~~-~~~~iDiEl~~~~~~~~--~l-~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~  175 (534)
                      |++++..++.. ++||||||+..+.+..+  ++ ...++.++++|+|||||++||+.+++.+++++|.+.||||+|||+|
T Consensus        83 ~~~ll~~~~~~~~~d~iDiE~~~~~~~~~~~~~~~~~~~~~~~vI~S~H~f~~TP~~~el~~~~~~~~~~gaDivKia~~  162 (236)
T d1sfla_          83 YLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVM  162 (236)
T ss_dssp             HHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEEC
T ss_pred             HHHHHHHHHHhcCCchhhhhhcchhhHHHHHHHHHHhhcCCCEEEEEEcCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEe
Confidence            99999988876 59999999988754322  22 2345678999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHHhhc-cCCCCCEEEEecCcccchhhhcccccCCccccccccCCcCCCCCCCCHHHHHhhhh
Q 009464          176 ALDITDVARVFQITVHS-QVSHVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN  248 (534)
Q Consensus       176 ~~~~~D~~~l~~~~~~~-~~~~~p~I~~~MG~~G~~sRi~~~~~gs~~tf~~l~~~~~sAPGQ~~~~~l~~~~~  248 (534)
                      |++.+|++++++++.++ ...+.|+|+||||+.|++||++++.|||++||++++++  +||||+++++|++++.
T Consensus       163 ~~~~~D~~~ll~~~~~~~~~~~~pii~~~MG~~G~~sRi~~~~~GS~~tya~~~~~--sAPGQ~~~~~lr~~l~  234 (236)
T d1sfla_         163 PHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEP--QAPGQIDVTDLKAQVT  234 (236)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGGGHHHHHTGGGGTBCEEEEBSSCC--SSTTCCBHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHHHhhccCCCEEEEecCCcchHHHHHHHHhCCceEEccCCCC--CCCCCcCHHHHHHHHh
Confidence            99999999999998775 33568999999999999999999999999999999864  9999999999999875

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.7e-35  Score=269.06  Aligned_cols=162  Identities=29%  Similarity=0.369  Sum_probs=140.7

Q ss_pred             cHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc----c
Q 009464          356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH----A  431 (534)
Q Consensus       356 D~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~----~  431 (534)
                      ||.||+.+|++.           +..+++|+|+|+|+||+|||++++|.+.|++|+|+|||.++++++++.+...    .
T Consensus         1 Dg~Gf~~~l~~~-----------~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~   69 (170)
T d1nyta1           1 DGVGLLSDLERL-----------SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA   69 (170)
T ss_dssp             HHHHHHHHHHHH-----------TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE
T ss_pred             CHhHHHHHHHHc-----------CCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccc
Confidence            899999999763           3567899999999999999999999999999999999999999999987532    1


Q ss_pred             cccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCe-EeccHHHHHHHH
Q 009464          432 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT-IVSGLEMFIGQA  510 (534)
Q Consensus       432 ~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~-ii~Gl~ml~~Qa  510 (534)
                      ..+++.   ....+|+||||||+||.+.  ..+++...+.+..+|+|++|+|.+|+|++.|+++||. +++|++||++||
T Consensus        70 ~~~~~~---~~~~~dliIN~Tp~G~~~~--~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~i~Gl~MLi~Qa  144 (170)
T d1nyta1          70 LSMDEL---EGHEFDLIINATSSGISGD--IPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQA  144 (170)
T ss_dssp             CCSGGG---TTCCCSEEEECCSCGGGTC--CCCCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEEECTHHHHHHHH
T ss_pred             cccccc---cccccceeecccccCcccC--CCCCcHHHhccCcEEEEeecCCCCCHHHHHHHHcCCCcccCCHHHHHHHH
Confidence            223332   2356899999999999865  3355667788889999999999999999999999985 789999999999


Q ss_pred             HHHHHHhcCCCCCHHHHHHHHHh
Q 009464          511 YEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       511 ~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +.||++|||+++|.+.|++.+++
T Consensus       145 ~~~f~lwtG~~~~~~~~~~~l~~  167 (170)
T d1nyta1         145 AHAFLLWHGVLPDVEPVIKQLQE  167 (170)
T ss_dssp             HHHHHHHHSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHH
Confidence            99999999999999999998765

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=1e-34  Score=267.69  Aligned_cols=159  Identities=30%  Similarity=0.411  Sum_probs=137.7

Q ss_pred             cHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCccccc
Q 009464          356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSL  434 (534)
Q Consensus       356 D~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~  434 (534)
                      ||.||.++|++.           +.+ ++|+|+|+|+||+|||++++|.+.|+ +|+|+||+.++++++++.++..... 
T Consensus         1 D~~G~~~~l~~~-----------~~~-~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~-   67 (167)
T d1npya1           1 DYIAIVKLIEKY-----------HLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN-   67 (167)
T ss_dssp             HHHHHHHHHHHT-----------TCC-TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEES-
T ss_pred             ChHHHHHHHHHc-----------CCC-CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhh-
Confidence            899999998763           122 57899999999999999999999999 8999999999999999988654322 


Q ss_pred             ccccccCCCCceEEEEcCCCCCCCCCCCC--CCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHHHHHHH
Q 009464          435 ADLENFNPEDGMILANTTSIGMQPKVDET--PIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYE  512 (534)
Q Consensus       435 ~~~~~~~~~~~divVn~t~~g~~~~~~~~--~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~  512 (534)
                       ..   ...++|+||||||+||.|..+..  +++...+++..+|+|++|+|.+|+|++.|+++||++++|++||++||+.
T Consensus        68 -~~---~~~~~DliINaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~i~Gl~Mli~Qa~~  143 (167)
T d1npya1          68 -SL---ENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETPFIRYAQARGKQTISGAAVIVLQAVE  143 (167)
T ss_dssp             -CC---TTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCHHHHHHHHTTCEEECHHHHHHHHHHH
T ss_pred             -cc---cccchhhheeccccCCccccccccccccHhhcCCcceEEEEeeccCCCHHHHHHHHCCCeEEECHHHHHHHHHH
Confidence             11   23468999999999998875544  3555667778899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCHHHHHHHH
Q 009464          513 QYERFTGLPAPKELFQKIM  531 (534)
Q Consensus       513 qf~lwtg~~~p~~~~~~~~  531 (534)
                      ||++|||+++|.++|+++.
T Consensus       144 ~f~lwtg~~~~~~~~~~aa  162 (167)
T d1npya1         144 QFELYTHQRPSDELIAEAA  162 (167)
T ss_dssp             HHHHHHSCCCCHHHHHHHH
T ss_pred             HHHHHhCCCCCHHHHHHHH
Confidence            9999999999999999865

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=100.00  E-value=1.6e-33  Score=262.21  Aligned_cols=165  Identities=30%  Similarity=0.499  Sum_probs=143.1

Q ss_pred             cHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-----
Q 009464          356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----  430 (534)
Q Consensus       356 D~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-----  430 (534)
                      ||.||+.+|++..           .++++|+|+|+|+||+||+++++|.+.| +|+|+||+.++++++++.+...     
T Consensus         1 D~~G~~~~l~~~~-----------~~~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~   68 (177)
T d1nvta1           1 DGIGARMALEEEI-----------GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF   68 (177)
T ss_dssp             HHHHHHHHHHHHH-----------CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH
T ss_pred             CHHHHHHHHHHhC-----------CCcCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhh
Confidence            8999999998642           4689999999999999999999997666 9999999999999999887521     


Q ss_pred             --ccccccccccCCCCceEEEEcCCCCCCCCCCCC-CCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHH
Q 009464          431 --ALSLADLENFNPEDGMILANTTSIGMQPKVDET-PIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFI  507 (534)
Q Consensus       431 --~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~-~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~  507 (534)
                        ..++.++.. ....+|++|||||+||.|..+.. +++...+.+..+++|++|+|.+|+|++.|+++||.+++|++||+
T Consensus        69 ~~~~~~~~~~~-~~~~~dliIn~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p~~T~l~~~a~~~G~~~i~Gl~MLv  147 (177)
T d1nvta1          69 GEEVKFSGLDV-DLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETVLLKEAKKVNAKTINGLGMLI  147 (177)
T ss_dssp             HHHEEEECTTC-CCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSCHHHHHHHTTTCEEECTHHHHH
T ss_pred             hhhhhhhhhhh-ccchhhhhccCCcccccccccccchhhhhccCcccceeeecCCcHhHHHHHHHHHCCCcccCCHHHHH
Confidence              234555555 55678999999999998764433 35667788889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHh
Q 009464          508 GQAYEQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       508 ~Qa~~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      +||+.||++|||+++|.+.|++.+++
T Consensus       148 ~Qa~~qf~lwtg~~~~~~~~r~~l~~  173 (177)
T d1nvta1         148 YQGAVAFKIWTGVEPNIEVMKNAIID  173 (177)
T ss_dssp             HHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence            99999999999999999999998765

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.9e-33  Score=257.92  Aligned_cols=165  Identities=32%  Similarity=0.485  Sum_probs=135.6

Q ss_pred             cHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHH---HHHHHHHHcCc-
Q 009464          356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDR---ARELAETVGGH-  430 (534)
Q Consensus       356 D~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~---a~~la~~~~~~-  430 (534)
                      ||.||+++|++.           +.++++|+|+|+|+||+||+++++|.+.|+ +|+|+||+.++   ++.+++.++.. 
T Consensus         1 D~~Gf~~~l~~~-----------~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~   69 (182)
T d1vi2a1           1 DGTGHIRAIKES-----------GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT   69 (182)
T ss_dssp             HHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHc-----------CCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc
Confidence            899999998752           357889999999999999999999999999 89999998654   44555555421 


Q ss_pred             -----cccccc---ccccCCCCceEEEEcCCCCCCCCCCCC-CCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEec
Q 009464          431 -----ALSLAD---LENFNPEDGMILANTTSIGMQPKVDET-PIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS  501 (534)
Q Consensus       431 -----~~~~~~---~~~~~~~~~divVn~t~~g~~~~~~~~-~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~  501 (534)
                           ..++.+   +.+ ....+|+||||||+||.+..... +++...+++..+++|++|+|.+|+|++.|+++||++++
T Consensus        70 ~~~~~~~~~~~~~~~~~-~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~T~ll~~a~~~g~~~i~  148 (182)
T d1vi2a1          70 DCVVTVTDLADQQAFAE-ALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTID  148 (182)
T ss_dssp             SCEEEEEETTCHHHHHH-HHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSSCHHHHHHHTTTCEEEC
T ss_pred             CcceEeeecccccchhh-hhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccccHHHHHHHHCcCeEec
Confidence                 112221   222 23468999999999998754433 34556678889999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 009464          502 GLEMFIGQAYEQYERFTGLPAPKELFQKIMA  532 (534)
Q Consensus       502 Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~~~  532 (534)
                      |++||++||+.||++|||+++|.+.|++++.
T Consensus       149 Gl~Mli~Qa~~~f~iwtg~~~~~~~~~~~l~  179 (182)
T d1vi2a1         149 GYGMLLWQGAEQFTLWTGKDFPLEYVKQVMG  179 (182)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCHHHHHHHHc
Confidence            9999999999999999999999999999873

>d1p77a2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=2.1e-33  Score=236.58  Aligned_cols=99  Identities=27%  Similarity=0.394  Sum_probs=94.4

Q ss_pred             ccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHH
Q 009464          256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK  333 (534)
Q Consensus       256 t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~  333 (534)
                      +++|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++..+|.|+|||||||+++++++|++|+.|+
T Consensus         1 M~~~~viG~PI~hS~SP~ihn~~~~~~gi~~~y~~~~v~~~~~~~~~~~l~~~~~~G~nVT~P~K~~~~~~~d~~~~~a~   80 (101)
T d1p77a2           1 MDLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAK   80 (101)
T ss_dssp             CEEEEEEESSCTTCCHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHH
T ss_pred             CCEEEEeCCCcccccCHHHHHHHHHHcCCCcccccccCCHHHHHHHHHHHHhccccceeeccHHHHHHHHHhccCCHHHH
Confidence            46899999999999999999999999999999999988  5899999999889999999999999999999999999999


Q ss_pred             HhcCeeEEEEeccCCeEEEEec
Q 009464          334 SIGAVNCIIRRQSDGKLFGYNT  355 (534)
Q Consensus       334 ~iGAvNTi~~~~~~g~l~G~NT  355 (534)
                      .+||||||++.+ +|+|+||||
T Consensus        81 ~igAvNti~~~~-~g~l~G~NT  101 (101)
T d1p77a2          81 LAEACNTLKKLD-DGKLYADNT  101 (101)
T ss_dssp             HHTCCSEEEECT-TSCEEEECC
T ss_pred             HcCeeEEEEECC-CCEEEEecC
Confidence            999999999864 899999999

>d1vi2a2 c.58.1.5 (A:5-106) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-33  Score=237.68  Aligned_cols=99  Identities=30%  Similarity=0.531  Sum_probs=95.6

Q ss_pred             CccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHH
Q 009464          255 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA  332 (534)
Q Consensus       255 ~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A  332 (534)
                      ++++|||||+||+||+||.|||++|+++|+|++|.++++  ++++++++.+++.+|.|+|||||||+++++++|++|+.|
T Consensus         2 k~~l~GliG~Pi~hS~SP~ihn~~f~~~gi~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVT~P~K~~~~~~~d~~~~~a   81 (102)
T d1vi2a2           2 KYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAA   81 (102)
T ss_dssp             CCEEEEEEESCCTTCSHHHHHHHHHHHTTCSEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTSTTGGGGGCSEECHHH
T ss_pred             CeEEEEEEcCCcccccCHHHHHHHHHHcCCCcEEeeEeeCchHHHHHHHHhhhhccchhhhhhHHHHHHHHhcccCCHHH
Confidence            578999999999999999999999999999999999998  479999999988999999999999999999999999999


Q ss_pred             HHhcCeeEEEEeccCCeEEEEec
Q 009464          333 KSIGAVNCIIRRQSDGKLFGYNT  355 (534)
Q Consensus       333 ~~iGAvNTi~~~~~~g~l~G~NT  355 (534)
                      +.+||||||+++  +|+|+||||
T Consensus        82 ~~igAvNti~~~--~g~l~G~NT  102 (102)
T d1vi2a2          82 KLVGAINTIVND--DGYLRGYNT  102 (102)
T ss_dssp             HHHTCCSEEEEE--TTEEEEECH
T ss_pred             HhhCcEEEEEEE--CCEEEEeCC
Confidence            999999999987  899999998

>d1nyta2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=2.4e-33  Score=236.14  Aligned_cols=99  Identities=30%  Similarity=0.526  Sum_probs=94.4

Q ss_pred             ccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccCHHHH
Q 009464          256 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK  333 (534)
Q Consensus       256 t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~~~A~  333 (534)
                      ++.|||||+||+||+||.|||.+|+++|+|+.|.++++  +++.++++.++..+|.|+|||||||+++++++|++|+.|+
T Consensus         1 M~~~~liG~pi~hS~SP~ihn~~~~~~gi~~~y~~~~v~~~~~~~~~~~l~~~~~~G~nVT~P~K~~~~~~~d~~~~~a~   80 (101)
T d1nyta2           1 METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAA   80 (101)
T ss_dssp             CCSEEEEESSCTTCSHHHHHHHHHHHHTCCCCEEEEECCTTCHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHH
T ss_pred             CCEEEEeCCCcccccCHHHHHHHHHHcCCcchhhhhcCChHhHHHHHHHhhhccchhheeehHHHHHHHHHhccCChHHH
Confidence            36799999999999999999999999999999999998  5899999999889999999999999999999999999999


Q ss_pred             HhcCeeEEEEeccCCeEEEEec
Q 009464          334 SIGAVNCIIRRQSDGKLFGYNT  355 (534)
Q Consensus       334 ~iGAvNTi~~~~~~g~l~G~NT  355 (534)
                      .+||||||++.+ +|+|+||||
T Consensus        81 ~igAvNti~~~~-~g~l~G~NT  101 (101)
T d1nyta2          81 LAGAVNTLMRLE-DGRLLGDNT  101 (101)
T ss_dssp             HHTCCSEEEECT-TSCEEEECC
T ss_pred             HhCcEEEEEECC-CCeEEEeCC
Confidence            999999999864 899999999

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=99.97  E-value=5.4e-32  Score=250.28  Aligned_cols=164  Identities=20%  Similarity=0.276  Sum_probs=132.8

Q ss_pred             cHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc--ccc
Q 009464          356 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--ALS  433 (534)
Q Consensus       356 D~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~~~  433 (534)
                      ||.||+++|++.           +..+++|+++|+|+||+||+++++|.+.+.+|+|+||+.++++++++.+...  ...
T Consensus         1 D~~Gf~~~l~~~-----------~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~   69 (171)
T d1p77a1           1 DGIGLVTDLQRL-----------NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA   69 (171)
T ss_dssp             HHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE
T ss_pred             CHHHHHHHHHHc-----------CCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccch
Confidence            899999998752           2467899999999999999999999986669999999999999999998632  111


Q ss_pred             cccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEec-CCChhHHHHHHHHCCCe-EeccHHHHHHHHH
Q 009464          434 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESGAT-IVSGLEMFIGQAY  511 (534)
Q Consensus       434 ~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y-~p~~T~ll~~A~~~G~~-ii~Gl~ml~~Qa~  511 (534)
                      +..... ....+|++|||||+||.+.  ..+++...+++..+++|++| +|.+|+|+++|+++||. +++|++||++||+
T Consensus        70 ~~~~~~-~~~~~diiIN~tp~g~~~~--~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v~~Gl~Ml~~Qa~  146 (171)
T d1p77a1          70 VSMDSI-PLQTYDLVINATSAGLSGG--TASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVAQAA  146 (171)
T ss_dssp             EEGGGC-CCSCCSEEEECCCC---------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEECSHHHHHHHHH
T ss_pred             hhhccc-cccccceeeeccccccccc--ccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCcccCcHHHHHHHHH
Confidence            221111 3567899999999999754  33455556677789999999 58899999999999994 7799999999999


Q ss_pred             HHHHHhcCCCCCHHHHHHHHHh
Q 009464          512 EQYERFTGLPAPKELFQKIMAK  533 (534)
Q Consensus       512 ~qf~lwtg~~~p~~~~~~~~~~  533 (534)
                      .||++|||.++|.+.|++.+++
T Consensus       147 ~~f~iwtg~~~~~~~~~~~l~~  168 (171)
T d1p77a1         147 HSFHLWRGVMPDFVSVYEQLKK  168 (171)
T ss_dssp             HHHHHHHSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHCCCCChHHHHHHHHH
Confidence            9999999999999999998875

>d1nvta2 c.58.1.5 (A:1-110) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.97  E-value=3.6e-32  Score=232.31  Aligned_cols=103  Identities=46%  Similarity=0.677  Sum_probs=99.0

Q ss_pred             ccCCCccEEEecCCCccccCCHHHHHHHHHHcCCCeEEEeccc--ccHHHHHHHhcCCCCCEEEeccchHHHHhhccccc
Q 009464          251 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEV  328 (534)
Q Consensus       251 ~~~~~t~~~~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~--~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~  328 (534)
                      +++++|++|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.+++.+|.|+|||||||++++++||++
T Consensus         6 mi~~~tk~~gliG~pi~~S~SP~ihn~~~~~~gi~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~   85 (110)
T d1nvta2           6 MINAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEI   85 (110)
T ss_dssp             CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGGGGHHHHHHHHTCCEEEECTTSTTGGGGGCSEE
T ss_pred             ccCCCccEEEEEcCCcccccCHHHHHHHHHHcCCcEEEeecccCHHHHHHHHHhhcccCcchhheehHHHHHHHHHhccC
Confidence            6889999999999999999999999999999999999999998  47899999998889999999999999999999999


Q ss_pred             CHHHHHhcCeeEEEEeccCCeEEEEec
Q 009464          329 DTVAKSIGAVNCIIRRQSDGKLFGYNT  355 (534)
Q Consensus       329 ~~~A~~iGAvNTi~~~~~~g~l~G~NT  355 (534)
                      |+.|+.+||||||+++  +|+|+||||
T Consensus        86 s~~a~~igavNti~~~--~~~l~G~NT  110 (110)
T d1nvta2          86 DKDAQLIGAVNTIKIE--DGKAIGYNT  110 (110)
T ss_dssp             CHHHHHHTCCCEEEEE--TTEEEEECC
T ss_pred             CHHHHHhCcEEEEEEE--CCEEEEeCC
Confidence            9999999999999997  899999999

>d1npya2 c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=99.96  E-value=7.7e-31  Score=220.94  Aligned_cols=101  Identities=25%  Similarity=0.443  Sum_probs=96.7

Q ss_pred             ccCCCccEE-EecCCCccccCCHHHHHHHHHHcCCCeEEEecccccHHHHHHHhcCCCCCEEEeccchHHHHhhcccccC
Q 009464          251 QMGPDTKVF-GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  329 (534)
Q Consensus       251 ~~~~~t~~~-~liG~pi~hS~SP~~hn~~f~~~gl~~~y~~~~~~~~~~~~~~~~~~~~~G~~VT~P~K~~v~~~ld~~~  329 (534)
                      +++++|++| +++|+|  ||+||.|||++|+++|+|++|.++++++++++++.++..+|.|+|||||||+++++++|++|
T Consensus         1 mi~~~t~~~~~i~g~P--~s~SP~ihn~~~~~~gi~~~Y~~~~v~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~s   78 (102)
T d1npya2           1 MINKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRGCAVSMPFKETCMPFLDEIH   78 (102)
T ss_dssp             CCCTTCEEEEEECSSC--CSHHHHHHHHHHHHHTCCEEEEEECCSCHHHHHHHHHHHTCCEEEECTTCTTTTGGGCSEEC
T ss_pred             CcCCCCEEEEEEcCCc--ccCCHHHHHHHHHHcCCCeEEeeEecccHHHHHHHHhccccceeEEehhHHHHHHHHhhhCC
Confidence            467889995 899999  88999999999999999999999999999999999988899999999999999999999999


Q ss_pred             HHHHHhcCeeEEEEeccCCeEEEEec
Q 009464          330 TVAKSIGAVNCIIRRQSDGKLFGYNT  355 (534)
Q Consensus       330 ~~A~~iGAvNTi~~~~~~g~l~G~NT  355 (534)
                      +.|+.+||||||+++  +|+|+||||
T Consensus        79 ~~a~~igAvNti~~~--~g~l~G~NT  102 (102)
T d1npya2          79 PSAQAIESVNTIVND--NGFLRAYNT  102 (102)
T ss_dssp             HHHHTTTCCCEEEEE--TTEEEEECH
T ss_pred             hhhhhcCcEEEEEEE--CCEEEEeCC
Confidence            999999999999987  899999998

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.31  E-value=1.1e-12  Score=121.53  Aligned_cols=116  Identities=23%  Similarity=0.328  Sum_probs=86.8

Q ss_pred             EEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc
Q 009464          352 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH  430 (534)
Q Consensus       352 G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~  430 (534)
                      |+|||+.|.+..+.+..          +.+++||+++|+|+ ||+|++++..|++.|++|++++|+.++++++++.+...
T Consensus         1 g~~~~~~~~v~~~~~~~----------~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~   70 (191)
T d1luaa1           1 GSNTTAAAGVALVVKAA----------GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR   70 (191)
T ss_dssp             GHHHHHHHHHHHHHHHT----------TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHc----------CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc
Confidence            78999999998875532          36899999999998 89999999999999999999999999999998877421


Q ss_pred             ----c--ccc---ccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccC---CCCEEEEEecCCC
Q 009464          431 ----A--LSL---ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG---HYALVFDAVYTPK  484 (534)
Q Consensus       431 ----~--~~~---~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~---~~~~v~Dv~y~p~  484 (534)
                          .  .+.   +++.+ ..++.|+||||+++++..      ++.+.|+   ...++.++++.|.
T Consensus        71 ~~~~~~~~d~~~~~~~~~-~~~~iDilin~Ag~g~~~------~~~e~~~~~~~~nv~~~~~~~~~  129 (191)
T d1luaa1          71 FKVNVTAAETADDASRAE-AVKGAHFVFTAGAIGLEL------LPQAAWQNESSIEIVADYNAQPP  129 (191)
T ss_dssp             HTCCCEEEECCSHHHHHH-HTTTCSEEEECCCTTCCC------BCHHHHHTCTTCCEEEECCCSSS
T ss_pred             cchhhhhhhcccHHHHHH-HhcCcCeeeecCcccccc------CCHHHHHhhhcceeehhHhhHHH
Confidence                1  122   22333 456789999999987532      2333332   3356777777654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=99.26  E-value=1.8e-12  Score=116.63  Aligned_cols=125  Identities=26%  Similarity=0.418  Sum_probs=92.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      .++++++++|+|+|++|+.++..|...|+ +++|+|||.+++++++++++....+++++.+ .+.++|+||+||+.+. |
T Consensus        20 ~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~-~l~~~Divi~atss~~-~   97 (159)
T d1gpja2          20 GSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVD-HLARSDVVVSATAAPH-P   97 (159)
T ss_dssp             SCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHH-HHHTCSEEEECCSSSS-C
T ss_pred             CCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHH-HhccCCEEEEecCCCC-c
Confidence            36789999999999999999999999999 8999999999999999999988888888776 5667999999998652 1


Q ss_pred             CCCCCCCCcccc---------CCCCEEEEEecCCChhHHHHHHHHCCCe--EeccHHHHHHHHHHH
Q 009464          459 KVDETPIPKHAL---------GHYALVFDAVYTPKITRLLREAEESGAT--IVSGLEMFIGQAYEQ  513 (534)
Q Consensus       459 ~~~~~~i~~~~l---------~~~~~v~Dv~y~p~~T~ll~~A~~~G~~--ii~Gl~ml~~Qa~~q  513 (534)
                           -+..+.+         ....+++|+.+-+...+-+...  .|+.  -++.+++++.+..+.
T Consensus        98 -----ii~~~~i~~~~~~r~~~~~~~iiDlavPr~vd~~v~~~--~~v~l~~ld~l~~~~~~n~~~  156 (159)
T d1gpja2          98 -----VIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVENI--EDVEVRTIDDLRVIARENLER  156 (159)
T ss_dssp             -----CBCHHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGGS--TTEEEEEHHHHHHHHHHHHHH
T ss_pred             -----cccHhhhHHHHHhcccCCCeEEEeecCCCCcChhhhcc--CCeEEEeHHHHHHHHHHHHHH
Confidence                 1332222         2335899998543333332222  2443  356777777766543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.85  E-value=2.3e-10  Score=109.75  Aligned_cols=125  Identities=19%  Similarity=0.273  Sum_probs=85.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      +|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...    +++.+   +.++      ..+..|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence            478999999999 799999999999999999999999999999999986432    22211   1110      356899


Q ss_pred             EEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEeccHHHHHHHH
Q 009464          447 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVSGLEMFIGQA  510 (534)
Q Consensus       447 ivVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~Gl~ml~~Qa  510 (534)
                      ++||+++.....  ....++.+.|   .-++|+++...   ...+++.++++ +.++++-.++....+
T Consensus        81 ilVnnAg~~~~~--~~~~~~~~~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~  143 (243)
T d1q7ba_          81 ILVNNAGITRDN--LLMRMKDEEW---NDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG  143 (243)
T ss_dssp             EEEECCCCCCCC--CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             eehhhhhhcccc--cccccccccc---ccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC
Confidence            999999765321  1122233333   45677776533   33556666554 457777666654433

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=4.2e-10  Score=108.29  Aligned_cols=125  Identities=18%  Similarity=0.227  Sum_probs=84.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc---cccc---ccccc------CCCCceE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA---LSLA---DLENF------NPEDGMI  447 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~---~~~~---~~~~~------~~~~~di  447 (534)
                      .|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...   +++.   ++.++      ..+..|+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            578999999999 799999999999999999999999999999998876421   2221   11110      3467899


Q ss_pred             EEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCeEeccHHHHHHH
Q 009464          448 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGATIVSGLEMFIGQ  509 (534)
Q Consensus       448 vVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii~Gl~ml~~Q  509 (534)
                      +||+++....+. ....++.+.|   .-++|++....   ...+++.+++.+..+++-.++....
T Consensus        83 lVnnAG~~~~~~-~~~~~~~~~~---~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~  143 (250)
T d1ydea1          83 VVNNAGHHPPPQ-RPEETSAQGF---RQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI  143 (250)
T ss_dssp             EEECCCCCCCCC-CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH
T ss_pred             EEeccccccccc-ccccccHHHH---HHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccc
Confidence            999998643221 1112333333   44677775432   3355666666656777766665443

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.82  E-value=2.7e-10  Score=109.82  Aligned_cols=121  Identities=17%  Similarity=0.218  Sum_probs=83.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc----cccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL----SLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~----~~~~---~~~~------~~~~~d  446 (534)
                      .|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++.+..    ++.+   +.++      ..+..|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            378999999999 7999999999999999999999999999999999975431    2211   1110      346789


Q ss_pred             EEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCeEeccHHHH
Q 009464          447 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       447 ivVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                      ++||++++....  ....++.+.|   .-++|++....   ...+++.++++|.++++-.++.
T Consensus        83 ilVnnAG~~~~~--~~~~~~~~~~---~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          83 VLVNNAGILLPG--DMETGRLEDF---SRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EEEECCCCCCCB--CTTTCCHHHH---HHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             eEEecccccCCC--CcccCCHHHH---HHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            999999875321  1222333333   44667775432   3456666777776777644433

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.81  E-value=4.1e-10  Score=109.91  Aligned_cols=121  Identities=17%  Similarity=0.164  Sum_probs=77.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .|+||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++.++++...    .++.+   +.++      ..+..|
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence            368999999999 799999999999999999999999999999998886432    12211   1110      346789


Q ss_pred             EEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCeEec
Q 009464          447 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGATIVS  501 (534)
Q Consensus       447 ivVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii~  501 (534)
                      ++||++++............+.....+.-++|+++...   ...+++.+++++..+++
T Consensus        82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~  139 (276)
T d1bdba_          82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIF  139 (276)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCcee
Confidence            99999987532210000111110011234667765422   23556666555445544

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.79  E-value=4.2e-10  Score=108.59  Aligned_cols=119  Identities=24%  Similarity=0.265  Sum_probs=79.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----cccc---ccccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLA---DLENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~---~~~~~------~~~~~d  446 (534)
                      +|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...    +++.   ++.++      ..+..|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence            578999999999 799999999999999999999999999999998886432    2222   11110      346799


Q ss_pred             EEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEeccHH
Q 009464          447 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVSGLE  504 (534)
Q Consensus       447 ivVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~Gl~  504 (534)
                      ++||++++....  ....++.+.|   .-++|+++...   ...+++.++++ +.++|+-.+
T Consensus        82 ilVnnAg~~~~~--~~~~~~~~~~---~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS  138 (254)
T d1hdca_          82 GLVNNAGISTGM--FLETESVERF---RKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISS  138 (254)
T ss_dssp             EEEECCCCCCCS--CGGGSCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             EEEecCcccccc--cccccccccc---chhhhHHhhHHHHHHHHHHHHHhhcCCCeeccccc
Confidence            999999875321  1112222323   44677776422   33455555554 346665443

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=4.3e-10  Score=107.86  Aligned_cols=119  Identities=16%  Similarity=0.215  Sum_probs=81.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---c----ccccccc---ccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H----ALSLADL---ENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~----~~~~~~~---~~~------~~  442 (534)
                      .++.||.++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   +    .+++.+.   .++      ..
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            3688999999999 7999999999999999999999999999999888742   1    1222221   110      35


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCC-eEeccH
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGA-TIVSGL  503 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~-~ii~Gl  503 (534)
                      +..|++|||++.+....  ....+.+.+   .-++|+++...   ...+++.+++++. ++++..
T Consensus        83 g~idilinnag~~~~~~--~~~~~~~~~---~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~is  142 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSD--LFATQDPQI---EKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVA  142 (244)
T ss_dssp             CCCSEEEECCCCCCCCC--CGGGHHHHH---HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCceeEeecccccccc--ccccchhHH---HhhcceeeeccHHHHHHHhhhHHhcCCceEEEee
Confidence            67999999999874322  111222222   34677776433   2357777777653 565533

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.77  E-value=6.3e-10  Score=106.50  Aligned_cols=113  Identities=23%  Similarity=0.208  Sum_probs=76.8

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc--ccc---ccccc------CCCCceEE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SLA---DLENF------NPEDGMIL  448 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~--~~~---~~~~~------~~~~~div  448 (534)
                      .++||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++....  ++.   ++.++      ..+..|++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            367999999999 7999999999999999999999999999999988765432  222   11110      34679999


Q ss_pred             EEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCe
Q 009464          449 ANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGAT  498 (534)
Q Consensus       449 Vn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~  498 (534)
                      ||++++....  ....++.+.|   .-++|++....   ...+++.+++.+..
T Consensus        82 VnnAG~~~~~--~~~~~~~~~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~~  129 (242)
T d1ulsa_          82 VHYAGITRDN--FHWKMPLEDW---ELVLRVNLTGSFLVAKAASEAMREKNPG  129 (242)
T ss_dssp             EECCCCCCCC--CGGGCCHHHH---HHHHHHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred             EECCcccccC--chhhCcchhh---hccccccchhhhhhhhhccccccccccc
Confidence            9999875321  1122333333   44667665422   23556666665543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.76  E-value=7.7e-10  Score=106.44  Aligned_cols=116  Identities=21%  Similarity=0.320  Sum_probs=76.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH----cCcc----ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~----~~~~----~~~~~---~~~~------~~  442 (534)
                      +++||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++    +.+.    .++.+   +.++      ..
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            578999999999 79999999999999999999999999988777655    2222    12211   1110      34


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEec
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVS  501 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~  501 (534)
                      +..|++||++++....  +...++.+.|   .-++|+++...   ...+++.+++++ .++++
T Consensus        82 g~iDiLVnnAG~~~~~--~~~~~~~e~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~  139 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRH--PAEEFPLDEF---RQVIEVNLFGTYYVCREAFSLLRESDNPSIIN  139 (251)
T ss_dssp             SCCCEEEECCCCCCCC--CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEE
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHH---HHHHHhhhhhhhhhhhhhhhcccccccccccc
Confidence            6799999999875321  1222333333   45677776432   335566666553 35554

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.70  E-value=8.1e-10  Score=107.04  Aligned_cols=118  Identities=17%  Similarity=0.246  Sum_probs=72.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc------c----ccccc---cccc------C
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH------A----LSLAD---LENF------N  441 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~------~----~~~~~---~~~~------~  441 (534)
                      |+||.++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++...      .    .++.+   +.++      .
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            68999999999 79999999999999999999999999999998877311      1    12211   1110      3


Q ss_pred             CCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCeEe
Q 009464          442 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGATIV  500 (534)
Q Consensus       442 ~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii  500 (534)
                      .+..|++||+++...... ...++.....+.+.-++|+++...   ...+++.+++.+..+|
T Consensus        83 ~g~iDilvnnAG~~~~~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI  143 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDS-QSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIV  143 (264)
T ss_dssp             HSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             hCCCCEeecccccccCCc-cccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcce
Confidence            467999999998753211 111222222222345667765422   2355566666544433

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.70  E-value=1.9e-09  Score=103.54  Aligned_cols=123  Identities=13%  Similarity=0.104  Sum_probs=83.5

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---c-------cccC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---L-------ENFN  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~-------~~~~  441 (534)
                      ..+++|.++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   +.    .++.+   +       .+ .
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~-~   84 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT-E   84 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-h
Confidence            5688999999999 7999999999999999999999999999999988753   11    12211   1       12 3


Q ss_pred             CCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEeccHHHHHH
Q 009464          442 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVSGLEMFIG  508 (534)
Q Consensus       442 ~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~Gl~ml~~  508 (534)
                      .+..|++||+++......  ...++.+.|   .-++|++....   ...+++.++++ +.++|+-.++...
T Consensus        85 ~g~iDilvnnag~~~~~~--~~~~~~~~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~  150 (251)
T d2c07a1          85 HKNVDILVNNAGITRDNL--FLRMKNDEW---EDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL  150 (251)
T ss_dssp             CSCCCEEEECCCCCCCCC--TTTCCHHHH---HHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             cCCceeeeeccccccccc--cccccHHHH---hhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhc
Confidence            578999999998654321  222333333   45777776533   23455555554 4577775554443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.69  E-value=6.1e-10  Score=107.69  Aligned_cols=126  Identities=13%  Similarity=-0.004  Sum_probs=78.7

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      .+++||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   +.    +++.+   +.++      ..
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            5689999999999 7999999999999999999999999999999888742   11    12211   1110      22


Q ss_pred             -CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEeccHHHHHHHH
Q 009464          443 -EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVSGLEMFIGQA  510 (534)
Q Consensus       443 -~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~Gl~ml~~Qa  510 (534)
                       +..|++||+++.....  ....++.+.|   .-++|+++...   ...+++.++++ +.++++-.++....+
T Consensus        84 ~g~idilvnnAG~~~~~--~~~~~~~~~~---~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~  151 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSK--PTLDYTAEDF---SFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS  151 (259)
T ss_dssp             TTCCSEEEEECCC--------CCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------
T ss_pred             CCCcccccccccccCCC--chhhCCHHHH---HHHHHHHhhhheeeehhhhhccccccccccccccccccccc
Confidence             5689999999875321  1222333333   45677776432   23455556554 457777666655444

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.69  E-value=2.2e-08  Score=95.50  Aligned_cols=74  Identities=27%  Similarity=0.323  Sum_probs=60.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-c--ccccc---c---cccCCCCceEEEE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-A--LSLAD---L---ENFNPEDGMILAN  450 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-~--~~~~~---~---~~~~~~~~divVn  450 (534)
                      +|+||++||+|+ +|+|+++|..|+++|++|++++|+.++++++++++... .  +++.+   +   .+ ..+..|++||
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~-~~g~iDilVn   80 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG-GIGPVDLLVN   80 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT-TCCCCSEEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHH-HcCCCeEEEE
Confidence            578999999999 79999999999999999999999999999999887531 1  22221   1   12 4678999999


Q ss_pred             cCCCC
Q 009464          451 TTSIG  455 (534)
Q Consensus       451 ~t~~g  455 (534)
                      ++++.
T Consensus        81 nAg~~   85 (242)
T d1cyda_          81 NAALV   85 (242)
T ss_dssp             CCCCC
T ss_pred             CCccc
Confidence            99865

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.69  E-value=1.9e-09  Score=104.84  Aligned_cols=76  Identities=18%  Similarity=0.290  Sum_probs=59.3

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc------c----ccccc---cccc------
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH------A----LSLAD---LENF------  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~------~----~~~~~---~~~~------  440 (534)
                      .|+||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++...      .    +++.+   +.++      
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            378999999999 79999999999999999999999999999998887421      1    12211   1110      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|++||+++...
T Consensus        82 ~~g~iDilvnnAG~~~   97 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAI   97 (272)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HhCCceEEEeCCcccC
Confidence            3467899999998753

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.69  E-value=2.1e-09  Score=104.69  Aligned_cols=113  Identities=18%  Similarity=0.250  Sum_probs=73.6

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---c---c----ccccc---cccc------C
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H---A----LSLAD---LENF------N  441 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~---~----~~~~~---~~~~------~  441 (534)
                      |+||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   .   .    .++.+   +.++      .
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            67999999999 7999999999999999999999999999999887731   1   1    12211   1110      3


Q ss_pred             CCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCC
Q 009464          442 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGA  497 (534)
Q Consensus       442 ~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~  497 (534)
                      .+..|++||+++............+.+.|   ..++|+++...   ...+++.+++.+.
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~  137 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELY---QKTFKLNFQAVIEMTQKTKEHLIKTKG  137 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred             cCCceEEEeecccccccccccccCCHHHH---HHHHhhccccccccccccccccccccc
Confidence            46789999999875432111111222222   44667665432   2345555655533

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.64  E-value=4.9e-09  Score=101.11  Aligned_cols=120  Identities=15%  Similarity=0.126  Sum_probs=78.9

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      .+|+||++||+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   ..    +++.+   +.++      ..
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            5789999999999 7999999999999999999999999999999888742   11    12211   1110      23


Q ss_pred             C-CceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEeccHH
Q 009464          443 E-DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSGLE  504 (534)
Q Consensus       443 ~-~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~Gl~  504 (534)
                      + ..|++||+++.....  ....++.+.|   .-++|++....   ...+++.+++.+ .++++-.+
T Consensus        84 ~~~idilvnnAG~~~~~--~~~~~~~e~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS  145 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYK--EAKDYTVEDY---SLIMSINFEAAYHLSVLAHPFLKASERGNVVFISS  145 (259)
T ss_dssp             TTCCCEEEECCCCCCCC--CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECC
T ss_pred             CCCceEEEECCceeccC--ccccCCHHHH---HHHHhcccceeEEEEeeccchhhhhcccccccccc
Confidence            3 689999999875321  1122333333   45677775422   234555566543 35555433

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.64  E-value=3e-09  Score=102.66  Aligned_cols=116  Identities=15%  Similarity=0.221  Sum_probs=75.4

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc-----Ccc----ccccc---cccc------CC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~-----~~~----~~~~~---~~~~------~~  442 (534)
                      |+||+++|+|+ +|+|++++..|++.|++|++++|+.++++++.+++.     .+.    +++.+   +.++      ..
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            57999999999 799999999999999999999999999988877662     111    12221   1110      34


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEec
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVS  501 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~  501 (534)
                      +..|++||++++... ......++.+.|   .-++|++....   ...+++.++++ +.++++
T Consensus        82 G~iDiLVnnAG~~~~-~~~~~~~~~~~~---~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~  140 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGK-QNPTESFTAAEF---DKVVSINLRGVFLGLEKVLKIMREQGSGMVVN  140 (258)
T ss_dssp             SCCSEEEECCCCCCC-CBCGGGSCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCCCEEEECCccccc-CCchhhhhhhHH---HHHhhhhccchhhhhhhhHhhhhhhcCCCCcc
Confidence            679999999986421 111112333333   45777776432   22455555543 446665

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=4.2e-08  Score=93.56  Aligned_cols=75  Identities=29%  Similarity=0.398  Sum_probs=60.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---cccccc---c---cccCCCCceEEEE
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---ALSLAD---L---ENFNPEDGMILAN  450 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~~~~~~---~---~~~~~~~~divVn  450 (534)
                      .++||++||+|+ +|+|+++|..|++.|++|++++|+.++++++++++...   ..++.+   +   -+ ..+..|++||
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~g~iDilVn   82 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG-SVGPVDLLVN   82 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT-TCCCCCEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHH-HhCCceEEEe
Confidence            478999999999 79999999999999999999999999999999887632   122222   1   12 4678999999


Q ss_pred             cCCCCC
Q 009464          451 TTSIGM  456 (534)
Q Consensus       451 ~t~~g~  456 (534)
                      +++...
T Consensus        83 nAg~~~   88 (244)
T d1pr9a_          83 NAAVAL   88 (244)
T ss_dssp             CCCCCC
T ss_pred             cccccc
Confidence            998753

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.62  E-value=2.6e-08  Score=96.34  Aligned_cols=75  Identities=23%  Similarity=0.342  Sum_probs=59.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc------cccccc---cccc------CCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH------ALSLAD---LENF------NPED  444 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~------~~~~~~---~~~~------~~~~  444 (534)
                      .|+||++||+|+ +|+|+++|..|++.|++|++++|+.++++++++++...      .+++.+   +.++      ..+.
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            378999999999 79999999999999999999999999999999998632      112221   1110      3467


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|++||++++.
T Consensus        83 iD~lVnnAG~~   93 (268)
T d2bgka1          83 LDIMFGNVGVL   93 (268)
T ss_dssp             CCEEEECCCCC
T ss_pred             cceeccccccc
Confidence            89999999865

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.62  E-value=1.9e-08  Score=96.74  Aligned_cols=75  Identities=32%  Similarity=0.429  Sum_probs=60.6

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++.+.    +++.+   +.++      ..+..|
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            368999999999 799999999999999999999999999999999997543    12221   1110      346799


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++||+++..
T Consensus        82 ilVnnAg~~   90 (256)
T d1k2wa_          82 ILVNNAALF   90 (256)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeecccc
Confidence            999999865

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.61  E-value=3.5e-09  Score=101.49  Aligned_cols=119  Identities=20%  Similarity=0.254  Sum_probs=77.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHcCcc----ccccc---cccc------CCCCc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHA----LSLAD---LENF------NPEDG  445 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~  445 (534)
                      .|+||.++|+|+ +|+|+++|..|++.|++|++++|+. +.+++..+..+.+.    +++.+   +.++      ..+..
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            368999999999 7999999999999999999999976 44566666665432    22221   1110      34679


Q ss_pred             eEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEeccHH
Q 009464          446 MILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSGLE  504 (534)
Q Consensus       446 divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~Gl~  504 (534)
                      |++||++++...  .....++.+.|   .-++|+++...   ...+++.+++++ ..+++-.+
T Consensus        82 DilVnnAG~~~~--~~~~~~~~e~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS  139 (247)
T d2ew8a1          82 DILVNNAGIYPL--IPFDELTFEQW---KKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTS  139 (247)
T ss_dssp             CEEEECCCCCCC--CCGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CEEEECCCCCCC--CChHhCCHHHh---hhhheeehhhhhHHHHHHHhHHHhcCCCCcccccc
Confidence            999999987532  11122333333   45777776533   345666666653 45665433

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.60  E-value=3.2e-08  Score=94.41  Aligned_cols=118  Identities=19%  Similarity=0.230  Sum_probs=79.4

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...    +++.+   +.++      ..+..|
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            578999999999 799999999999999999999999999999999986432    12211   1110      246789


Q ss_pred             EEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEeccH
Q 009464          447 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVSGL  503 (534)
Q Consensus       447 ivVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~Gl  503 (534)
                      ++||+++.....  ....++.+.|   .-++|+++...   ...+++.++++ +.++|+-.
T Consensus        83 ilinnAG~~~~~--~~~~~~~~~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~is  138 (244)
T d1nffa_          83 VLVNNAGILNIG--TIEDYALTEW---QRILDVNLTGVFLGIRAVVKPMKEAGRGSIINIS  138 (244)
T ss_dssp             EEEECCCCCCCB--CTTTSCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             EEEECCcccCCC--chhhCCHHHH---hHHhhcccchhhHHHHHHHhHHHhcCcceEEecc
Confidence            999999865321  1222333333   44667776432   12355556554 33566533

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.60  E-value=3e-09  Score=102.72  Aligned_cols=118  Identities=19%  Similarity=0.258  Sum_probs=75.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHH----cCcc----ccccc---cccc------CC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETV----GGHA----LSLAD---LENF------NP  442 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~----~~~~----~~~~~---~~~~------~~  442 (534)
                      ++||+++|+|+ +|+|+++|..|++.|++|++++|+ .++++++.+++    +.+.    .++.+   +.++      ..
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57899999999 799999999999999999999997 56677766554    2221    12221   1110      34


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEeccHH
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSGLE  504 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~Gl~  504 (534)
                      +..|++||++++....  ....++.+.|   .-++|+++...   ...+++.+++++ .++|+-.+
T Consensus        82 G~iDiLVnnAG~~~~~--~~~~~~~~~~---~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS  142 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTA--LIEDFPTEKW---DAILALNLSAVFHGTAAALPHMKKQGFGRIINIAS  142 (260)
T ss_dssp             SCCSEEEECCCCCCCC--CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCcEEEeecccccCC--chhhhhHHhh---hhhhhccccccccccchhhhhHhhcCCceEeeccc
Confidence            6799999999875321  1122333333   45677776533   235666766654 46665433

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.59  E-value=3.5e-08  Score=94.51  Aligned_cols=76  Identities=28%  Similarity=0.359  Sum_probs=60.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc--c----ccccc---cccc------CCCC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--A----LSLAD---LENF------NPED  444 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--~----~~~~~---~~~~------~~~~  444 (534)
                      .|+||++||+|+ +|+|+++|..|++.|++|++++|+.++++++++++...  .    .++.+   +.++      ..+.
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            378999999999 89999999999999999999999999999999988631  1    12211   1110      3467


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|++||+++...
T Consensus        83 iDiLVnnAg~~~   94 (251)
T d1zk4a1          83 VSTLVNNAGIAV   94 (251)
T ss_dssp             CCEEEECCCCCC
T ss_pred             ceEEEecccccc
Confidence            999999998763

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.57  E-value=5.9e-09  Score=100.71  Aligned_cols=116  Identities=22%  Similarity=0.290  Sum_probs=75.7

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      +++||+++|+|+ +|+|+++|..|++.|++|++++|+. ++++++++++.   .+.    +++.+   +.++      ..
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            689999999999 7999999999999999999999985 46777776653   221    12211   1110      34


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC--CeEec
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG--ATIVS  501 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G--~~ii~  501 (534)
                      +..|++||++++....  ....++.+.|   .-++|+++...   ...+++.+++++  ..|++
T Consensus        84 G~iDiLVnnAG~~~~~--~~~~~~~~~~---~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~  142 (261)
T d1geea_          84 GKLDVMINNAGLENPV--SSHEMSLSDW---NKVIDTNLTGAFLGSREAIKYFVENDIKGTVIN  142 (261)
T ss_dssp             SCCCEEEECCCCCCCC--CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CCCCEeeccceecCCc--chhhcCHHHH---HHHHHHhcccchhHHHHHhhhhccccccccccc
Confidence            6789999999875321  1122333333   45777776532   335566666653  34554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.54  E-value=2.4e-09  Score=105.76  Aligned_cols=126  Identities=16%  Similarity=0.171  Sum_probs=83.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC---------CHHHHHHHHHHHcCcc----cc---ccccccc--
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR---------TYDRARELAETVGGHA----LS---LADLENF--  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R---------~~~~a~~la~~~~~~~----~~---~~~~~~~--  440 (534)
                      ..|+||++||+|+ +|+|+++|..|+++|++|++.+|         +.+.++++++++....    .+   .++.+++  
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            5688999999999 79999999999999999999854         5667788877775221    11   1111110  


Q ss_pred             ----CCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEeccHHHHHHHH
Q 009464          441 ----NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSGLEMFIGQA  510 (534)
Q Consensus       441 ----~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~Gl~ml~~Qa  510 (534)
                          ..+..|+||||+|+....  ....++.+.|   ..++|+++...   ...+++.+++++ .+||+-.++....+
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~--~~~~~~~e~~---~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~  155 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDR--SFSRISDEDW---DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG  155 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCC--CGGGCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHcCCCCEEEECCccCCCC--ChhhCCHHHH---hhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCC
Confidence                357899999999875321  1222333333   45778876533   345666676654 57887766654443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.54  E-value=8.8e-09  Score=98.70  Aligned_cols=117  Identities=26%  Similarity=0.334  Sum_probs=77.0

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc--cccc---cccc------CCCCceEEE
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SLAD---LENF------NPEDGMILA  449 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~--~~~~---~~~~------~~~~~divV  449 (534)
                      |+||++||+|+ +|+|+++|..|++.|++|++++|+.++ .++++.++....  ++.+   +.++      ..+..|++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            68999999999 799999999999999999999999775 456677664332  2221   1110      346799999


Q ss_pred             EcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEeccHH
Q 009464          450 NTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSGLE  504 (534)
Q Consensus       450 n~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~Gl~  504 (534)
                      |+++.....  ....++.+.|   .-++|++....   ...+++.+++++ .++|+-.+
T Consensus        82 nnAG~~~~~--~~~~~~~e~~---~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS  135 (248)
T d2d1ya1          82 NNAAIAAPG--SALTVRLPEW---RRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVAS  135 (248)
T ss_dssp             ECCCCCCCB--CTTTCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             EeCcCCCCC--ChhhCCHHHH---HHHHHhhhhhHhhhhhhhccccccccccccccccc
Confidence            999875321  1222333333   44667775422   345666776654 46665433

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.53  E-value=3.6e-08  Score=94.71  Aligned_cols=77  Identities=27%  Similarity=0.372  Sum_probs=60.4

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  442 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~  442 (534)
                      ..++||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   +.    +++.+   +.++      ..
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5689999999999 7999999999999999999999999999999888742   21    12211   1110      34


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|++||+++...
T Consensus        87 g~iDilvnnAG~~~  100 (255)
T d1fmca_          87 GKVDILVNNAGGGG  100 (255)
T ss_dssp             SSCCEEEECCCCCC
T ss_pred             CCCCEeeeCCcCCC
Confidence            67999999998753

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=6.9e-09  Score=100.53  Aligned_cols=114  Identities=20%  Similarity=0.208  Sum_probs=74.6

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----cc----ccccc----------ccccCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLAD----------LENFNP  442 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~----~~~~~----------~~~~~~  442 (534)
                      ++||+++|+|| +|+|+++|..|+++|++|++++|+.++++++++++..    ..    .+.++          ..+ ..
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK-LM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH-HH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHH-Hh
Confidence            89999999999 7999999999999999999999999999999877531    11    11111          111 24


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCCeEec
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGATIVS  501 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~~ii~  501 (534)
                      +..|+++|+++......  ....+.+.+   ...+|+++...   ...+++.+++.+..+++
T Consensus        91 g~~~~li~nag~~~~~~--~~~~~~~~~---~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~  147 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLN--LFHDDIHHV---RKSMEVNFLSYVVLTVAALPMLKQSNGSIVV  147 (269)
T ss_dssp             TSCSEEEECCCCCCCCC--CCCSCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCccccccccccccccc--cccCCHHHh---hhheeeehhhHHHHHHHHHHHHHhcCCcceE
Confidence            56899999987653221  112222222   34567776432   23555566654445554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.53  E-value=1.3e-08  Score=91.25  Aligned_cols=112  Identities=18%  Similarity=0.251  Sum_probs=76.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccc------cccccCCCCceEEEEcCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA------DLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~------~~~~~~~~~~divVn~t~~g~~  457 (534)
                      +|+++|+|||.+|+.+|+.|.+.|++|+|+|||.++++++++.+........      .... .....|+++.+++....
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~i~~~~~~~~   80 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDA-EVAKHDLVISLIPYTFH   80 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHH-HHTTSSEEEECSCGGGH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHh-hhhccceeEeeccchhh
Confidence            5899999999999999999999999999999999999999988764322111      1111 23456888877753211


Q ss_pred             CCCCCCCCCccccCCCCEEEEEecCCC-hhHHHHHHHHCCCeEec
Q 009464          458 PKVDETPIPKHALGHYALVFDAVYTPK-ITRLLREAEESGATIVS  501 (534)
Q Consensus       458 ~~~~~~~i~~~~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~  501 (534)
                           ..+..........++|+.|.+. ...+...++..+..+++
T Consensus        81 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  120 (182)
T d1e5qa1          81 -----ATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMN  120 (182)
T ss_dssp             -----HHHHHHHHHHTCEEECSSCCCHHHHHTHHHHHHTTCEEEC
T ss_pred             -----hHHHHHHHhhccceeecccCcHHHHHHHHHhccccceeeh
Confidence                 1111223344567889888755 34566667777765554

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.51  E-value=7.4e-08  Score=92.43  Aligned_cols=73  Identities=21%  Similarity=0.247  Sum_probs=57.4

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC---cc----ccccc---cccc------CCCCce
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~---~~~~------~~~~~d  446 (534)
                      ||.+||+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   +.    .++.+   +.++      ..+..|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            789999999 7999999999999999999999999999999887742   11    12211   1110      357899


Q ss_pred             EEEEcCCCCC
Q 009464          447 ILANTTSIGM  456 (534)
Q Consensus       447 ivVn~t~~g~  456 (534)
                      ++|||+++..
T Consensus        82 ilVnnAG~~~   91 (257)
T d2rhca1          82 VLVNNAGRPG   91 (257)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEecccccC
Confidence            9999998753

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=9.6e-08  Score=91.72  Aligned_cols=77  Identities=26%  Similarity=0.322  Sum_probs=60.0

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cc----ccccc---cccc------
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LENF------  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~----~~~~~---~~~~------  440 (534)
                      ..++||.+||+|+ +|+|+++|..|++.|++|++++|+.++++++++++..     ..    +++.+   +.++      
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3489999999999 7999999999999999999999999999999888742     11    12221   1110      


Q ss_pred             CCCCceEEEEcCCCCC
Q 009464          441 NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 ~~~~~divVn~t~~g~  456 (534)
                      ..+..|++||+++...
T Consensus        86 ~~g~iD~lVnnAg~~~  101 (257)
T d1xg5a_          86 QHSGVDICINNAGLAR  101 (257)
T ss_dssp             HHCCCSEEEECCCCCC
T ss_pred             hcCCCCEEEecccccC
Confidence            3467899999998653

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.49  E-value=7.9e-08  Score=92.44  Aligned_cols=74  Identities=19%  Similarity=0.240  Sum_probs=58.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---c----ccccc---cccc------CCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---A----LSLAD---LENF------NPED  444 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~----~~~~~---~~~~------~~~~  444 (534)
                      |+||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++...   .    +++.+   +.++      ..+.
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999 79999999999999999999999999999998887531   1    12211   1110      3467


Q ss_pred             ceEEEEcCCCC
Q 009464          445 GMILANTTSIG  455 (534)
Q Consensus       445 ~divVn~t~~g  455 (534)
                      .|++||+++..
T Consensus        83 iDilVnnaG~~   93 (260)
T d1zema1          83 IDFLFNNAGYQ   93 (260)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCeehhhhccc
Confidence            99999999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.48  E-value=5.3e-08  Score=93.68  Aligned_cols=75  Identities=23%  Similarity=0.320  Sum_probs=58.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH----cCcc----ccccc---c-------ccc
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---L-------ENF  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~----~~~~----~~~~~---~-------~~~  440 (534)
                      .+++||++||+|+ +|+|+++|..|++.|++|++++|+.++++++++++    +.+.    +++.+   +       .+ 
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~-   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA-   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            5789999999999 79999999999999999999999988877766554    3222    12211   1       12 


Q ss_pred             CCCCceEEEEcCCCC
Q 009464          441 NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ~~~~~divVn~t~~g  455 (534)
                      ..+..|++||+++..
T Consensus        84 ~~g~iDilVnnAg~~   98 (260)
T d1h5qa_          84 DLGPISGLIANAGVS   98 (260)
T ss_dssp             HSCSEEEEEECCCCC
T ss_pred             HhCCCcEeccccccc
Confidence            357899999999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.48  E-value=1.9e-07  Score=89.60  Aligned_cols=76  Identities=24%  Similarity=0.218  Sum_probs=59.2

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc---c----cccc---cc-------cccC
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---A----LSLA---DL-------ENFN  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~---~----~~~~---~~-------~~~~  441 (534)
                      .+++||+|||+|+ +|+|++++..|++.|++|++++|+.++++++++++...   .    +++.   ++       .+ .
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~   80 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH-V   80 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHH-H
Confidence            4688999999999 89999999999999999999999999999988877521   1    1221   11       11 2


Q ss_pred             C-CCceEEEEcCCCCC
Q 009464          442 P-EDGMILANTTSIGM  456 (534)
Q Consensus       442 ~-~~~divVn~t~~g~  456 (534)
                      . +..|++||+++...
T Consensus        81 ~~g~idilinnag~~~   96 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVI   96 (258)
T ss_dssp             TTSCCCEEEECCCCCC
T ss_pred             hCCCcEEEeccccccc
Confidence            2 46899999998653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=1e-07  Score=91.25  Aligned_cols=74  Identities=26%  Similarity=0.350  Sum_probs=58.0

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-----c----ccccc---cccc------CCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----A----LSLAD---LENF------NPE  443 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-----~----~~~~~---~~~~------~~~  443 (534)
                      +||++||+|+ +|+|+++|..|+++|++|++++|+.++++++++++...     .    +++.+   +.++      ..+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5899999999 79999999999999999999999999999998887431     1    12221   1110      346


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|++||+++...
T Consensus        82 ~iDilVnnAg~~~   94 (254)
T d2gdza1          82 RLDILVNNAGVNN   94 (254)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CcCeecccccccc
Confidence            7899999998753

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=1e-07  Score=93.50  Aligned_cols=76  Identities=25%  Similarity=0.361  Sum_probs=59.1

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC--------cc----ccccc---cccc---
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--------HA----LSLAD---LENF---  440 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~--------~~----~~~~~---~~~~---  440 (534)
                      ..|+||++||+|+ +|+|+++|..|++.|++|++++|+.++++++++++..        +.    +++.+   +.++   
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            4589999999999 7999999999999999999999999999988887731        11    12211   1110   


Q ss_pred             ---CCCCceEEEEcCCCC
Q 009464          441 ---NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ---~~~~~divVn~t~~g  455 (534)
                         ..+..|++||+++..
T Consensus        88 ~~~~~G~iDiLVnnAg~~  105 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQ  105 (297)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCeEEEEeecccc
Confidence               246789999999764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.44  E-value=1.4e-07  Score=92.07  Aligned_cols=77  Identities=25%  Similarity=0.365  Sum_probs=59.3

Q ss_pred             cccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----Ccc----ccccc---cccc------C
Q 009464          380 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD---LENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~~----~~~~~---~~~~------~  441 (534)
                      ..|+||++||+|+ ||+|+++|..|++.|++|++++|+.++++++++++.    ...    +++.+   +.++      .
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            4789999999999 899999999999999999999999998888776653    221    12211   1110      3


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|++||+++...
T Consensus       101 ~g~iDilvnnAg~~~  115 (294)
T d1w6ua_         101 AGHPNIVINNAAGNF  115 (294)
T ss_dssp             TCSCSEEEECCCCCC
T ss_pred             ccccchhhhhhhhcc
Confidence            567899999998764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.44  E-value=9.3e-08  Score=90.92  Aligned_cols=75  Identities=24%  Similarity=0.268  Sum_probs=60.0

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------CCCCce
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      .|+||++||+|+ +|+|+++|..|++.|++|++++|+.++++++.++++.+.    +++.+   +.++      ..+..|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            368999999999 799999999999999999999999999999999887543    12211   1110      246799


Q ss_pred             EEEEcCCCC
Q 009464          447 ILANTTSIG  455 (534)
Q Consensus       447 ivVn~t~~g  455 (534)
                      ++||+++..
T Consensus        82 iLinnAg~~   90 (241)
T d2a4ka1          82 GVAHFAGVA   90 (241)
T ss_dssp             EEEEGGGGT
T ss_pred             Eeccccccc
Confidence            999998765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.41  E-value=3e-09  Score=101.34  Aligned_cols=118  Identities=16%  Similarity=0.183  Sum_probs=73.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccc-------cccCCCCceEEEEcC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL-------ENFNPEDGMILANTT  452 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~-------~~~~~~~~divVn~t  452 (534)
                      .|+||++||+|+ +|+|+++|..|++.|++|++++|+.++.+++.. +..+..+.+++       .+ ..+..|++||++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~-~~g~iDiLVnnA   81 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG-VEVDVTDSDAVDRAFTAVEE-HQGPVEVLVSNA   81 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEE-EECCTTCHHHHHHHHHHHHH-HHSSCSEEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceE-EEEecCCHHHHHHHHHHHHH-hcCCceEEEeee
Confidence            588999999999 799999999999999999999998765443210 01111111111       12 346789999999


Q ss_pred             CCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCCC-eEeccHHH
Q 009464          453 SIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESGA-TIVSGLEM  505 (534)
Q Consensus       453 ~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G~-~ii~Gl~m  505 (534)
                      ++....  ....++.+.|   .-++|+++...   ...+++.++++++ ++|+-.++
T Consensus        82 G~~~~~--~~~~~~~e~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~  133 (237)
T d1uzma1          82 GLSADA--FLMRMTEEKF---EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSV  133 (237)
T ss_dssp             SCCC-------CCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             cccccc--cHhhCCHHHH---HHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcch
Confidence            875321  1222333333   45777776533   2355666776654 56664433

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.40  E-value=1.9e-07  Score=89.44  Aligned_cols=71  Identities=28%  Similarity=0.392  Sum_probs=55.4

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCCceE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDGMI  447 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~~di  447 (534)
                      |.+||+|+ +|+|+++|..|++.|++|++++|+.++++++++++.   .+.    +++.+   +.++      ..+..|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            56799999 799999999999999999999999999999988774   221    22221   1110      3578999


Q ss_pred             EEEcCCCC
Q 009464          448 LANTTSIG  455 (534)
Q Consensus       448 vVn~t~~g  455 (534)
                      +||+++++
T Consensus        82 lVnnAG~~   89 (255)
T d1gega_          82 IVNNAGVA   89 (255)
T ss_dssp             EEECCCCC
T ss_pred             EEeccccc
Confidence            99999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.37  E-value=3e-08  Score=94.41  Aligned_cols=113  Identities=14%  Similarity=0.197  Sum_probs=75.5

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCe-------EEEEeCCHHHHHHHHHHHcCc---c----ccccc---c-------cc
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGAR-------VVIANRTYDRARELAETVGGH---A----LSLAD---L-------EN  439 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~-------v~i~~R~~~~a~~la~~~~~~---~----~~~~~---~-------~~  439 (534)
                      +.+||+|+ +|+|+++|..|++.|++       |++++|+.++++++++++...   .    +++.+   +       .+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35789999 79999999999999997       999999999999998887431   1    12221   1       12


Q ss_pred             cCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEeccH
Q 009464          440 FNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSGL  503 (534)
Q Consensus       440 ~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~Gl  503 (534)
                       ..+..|++||+++.....  ....++.+.|   ..++|+|+...   ...+++.+++++ .++++-.
T Consensus        82 -~~g~iDilvnnAg~~~~~--~~~~~~~~~~---~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~is  143 (240)
T d2bd0a1          82 -RYGHIDCLVNNAGVGRFG--ALSDLTEEDF---DYTMNTNLKGTFFLTQALFALMERQHSGHIFFIT  143 (240)
T ss_dssp             -HTSCCSEEEECCCCCCCC--CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             -HcCCcceeecccccccCC--ccccCCHHHH---hhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEe
Confidence             356899999999875321  1122333333   55778886533   345667776543 4566543

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.35  E-value=1.3e-07  Score=89.32  Aligned_cols=71  Identities=23%  Similarity=0.193  Sum_probs=53.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccc----cccccCCCCceEEEEcCCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA----DLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~----~~~~~~~~~~divVn~t~~g  455 (534)
                      ++||++||+|+ +|+|+++|..|++.|++|++++|+.+++++...++  ..+++.    .+.+ ..++.|++||+++..
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~--~~~Dv~~~~~~~~~-~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY--VVCDLRKDLDLLFE-KVKEVDILVLNAGGP   77 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEE--EECCTTTCHHHHHH-HSCCCSEEEECCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcE--EEcchHHHHHHHHH-HhCCCcEEEeccccc
Confidence            57899999999 79999999999999999999999988766543221  112221    1222 457899999999864

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.3e-07  Score=88.33  Aligned_cols=73  Identities=26%  Similarity=0.378  Sum_probs=57.1

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc--cccc------cccccCCCCceEEEEcC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA------DLENFNPEDGMILANTT  452 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~--~~~~------~~~~~~~~~~divVn~t  452 (534)
                      |+||++||+|+ +|+|++++..|++.|++|++++|++++++++.+..+...  .+..      ...+ .....|++||++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~id~lVn~a   82 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFAN-EVERLDVLFNVA   82 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHH-HCSCCSEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccccccccccc-ccccceeEEecc
Confidence            78999999999 899999999999999999999999999988876654322  1111      1111 346789999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus        83 g~~   85 (245)
T d2ag5a1          83 GFV   85 (245)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            865

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.26  E-value=3.7e-08  Score=93.94  Aligned_cols=121  Identities=20%  Similarity=0.197  Sum_probs=77.3

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CCCCce
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDGM  446 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~~~~d  446 (534)
                      +.|||+|+ +|+|+++|..|++.|++|++. .|+.++++++.+++.   .+.    .++.+   +.++      ..+..|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999 799999999999999999885 678888888877663   221    12221   1110      357899


Q ss_pred             EEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHH-CCCeEeccHHHHHHHH
Q 009464          447 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEE-SGATIVSGLEMFIGQA  510 (534)
Q Consensus       447 ivVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~-~G~~ii~Gl~ml~~Qa  510 (534)
                      ++||+++.....  ....++.+.|   .-++|+++...   ...+++.+++ .+.++|+-.++....+
T Consensus        82 iLVnnAg~~~~~--~~~~~~~~~~---~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~  144 (244)
T d1edoa_          82 VVVNNAGITRDT--LLIRMKKSQW---DEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG  144 (244)
T ss_dssp             EEEECCCCCCCC--CGGGCCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred             cccccccccccc--chhccchHHH---HHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC
Confidence            999999765321  1122233333   45778876533   2345565554 4457887666655443

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=3.8e-07  Score=88.15  Aligned_cols=73  Identities=22%  Similarity=0.319  Sum_probs=54.7

Q ss_pred             CcE-EEEEcC-chhHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHcC---cc----cccccccc---c------CCCC
Q 009464          384 GKL-FVVIGA-GGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGG---HA----LSLADLEN---F------NPED  444 (534)
Q Consensus       384 ~k~-vlVlGa-GG~graia~~L~~~-G~~v~i~~R~~~~a~~la~~~~~---~~----~~~~~~~~---~------~~~~  444 (534)
                      ||+ +||+|+ +|+|+++|+.|+++ |++|++++|+.++++++++++..   ..    +++.+.++   +      ..+.
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            455 489999 79999999999986 78999999999999999988742   11    22222111   0      2467


Q ss_pred             ceEEEEcCCCCC
Q 009464          445 GMILANTTSIGM  456 (534)
Q Consensus       445 ~divVn~t~~g~  456 (534)
                      .|++||++|+..
T Consensus        82 iDiLVnNAGi~~   93 (275)
T d1wmaa1          82 LDVLVNNAGIAF   93 (275)
T ss_dssp             EEEEEECCCCCC
T ss_pred             cEEEEEcCCcCC
Confidence            999999999753

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.24  E-value=4.9e-07  Score=87.17  Aligned_cols=79  Identities=20%  Similarity=0.321  Sum_probs=57.8

Q ss_pred             cccccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC-HHHHHHHHHHHc---Ccc----ccccc---cccc-----
Q 009464          378 VSSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLAD---LENF-----  440 (534)
Q Consensus       378 ~~~~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~-~~~a~~la~~~~---~~~----~~~~~---~~~~-----  440 (534)
                      ....++||++||+|+ +|+|++++..|+++|++|++++|+ .+.++++++++.   .+.    .++.+   +.++     
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            446799999999999 899999999999999999998765 667777777653   211    12211   1110     


Q ss_pred             -CCCCceEEEEcCCCCC
Q 009464          441 -NPEDGMILANTTSIGM  456 (534)
Q Consensus       441 -~~~~~divVn~t~~g~  456 (534)
                       ..+..|++||+++...
T Consensus        92 ~~~g~idilV~nag~~~  108 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVS  108 (272)
T ss_dssp             HHHSCCCEEEECCCCCC
T ss_pred             HHhCCCCccccccccch
Confidence             3467899999997653

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.21  E-value=5.3e-07  Score=86.34  Aligned_cols=75  Identities=20%  Similarity=0.336  Sum_probs=55.9

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEE-eCCHHHHHHHHHHHc---Ccc----ccccc---cccc------CC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLAD---LENF------NP  442 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~-~R~~~~a~~la~~~~---~~~----~~~~~---~~~~------~~  442 (534)
                      +|.||+|||+|+ +|+|+++|..|++.|++|++. +|+.+.++++.+++.   .+.    +++.+   +.++      ..
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            588999999999 799999999999999999885 677777777777763   221    12211   1110      34


Q ss_pred             CCceEEEEcCCCC
Q 009464          443 EDGMILANTTSIG  455 (534)
Q Consensus       443 ~~~divVn~t~~g  455 (534)
                      +..|++||+++..
T Consensus        83 g~idilinnag~~   95 (259)
T d1ja9a_          83 GGLDFVMSNSGME   95 (259)
T ss_dssp             SCEEEEECCCCCC
T ss_pred             CCCcEEEeccccc
Confidence            6799999999875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.18  E-value=8.8e-07  Score=84.50  Aligned_cols=76  Identities=25%  Similarity=0.319  Sum_probs=52.5

Q ss_pred             cccCCcEEEEEcC-c--hhHHHHHHHHHHCCCeEEEEeCCHHHHHHH---HHHHcCc-c--ccc---cccccc------C
Q 009464          380 SALAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYDRAREL---AETVGGH-A--LSL---ADLENF------N  441 (534)
Q Consensus       380 ~~l~~k~vlVlGa-G--G~graia~~L~~~G~~v~i~~R~~~~a~~l---a~~~~~~-~--~~~---~~~~~~------~  441 (534)
                      .+++||+++|+|| |  |+|+++|..|++.|++|++.+|+.+..++.   ....+.. .  .++   ++++++      .
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence            4789999999998 4  899999999999999999999986543332   2222211 1  111   111110      3


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|++||+++..
T Consensus        84 ~g~iDilVnnag~~   97 (256)
T d1ulua_          84 FGGLDYLVHAIAFA   97 (256)
T ss_dssp             HSSEEEEEECCCCC
T ss_pred             cCCceEEEeccccc
Confidence            46799999999864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.14  E-value=1e-07  Score=91.27  Aligned_cols=112  Identities=10%  Similarity=0.073  Sum_probs=68.3

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc----Cccccccccccc------CCCCceEEEEcCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHALSLADLENF------NPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~----~~~~~~~~~~~~------~~~~~divVn~t~~  454 (534)
                      ++||+|+ +|+|+++|..|+++|++|++.+|+.++.+++.+...    .+..+.++..++      ..+..|++|||++.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            6899999 799999999999999999999999888777654332    111111121110      34679999999875


Q ss_pred             CCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHC-CCeEec
Q 009464          455 GMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEES-GATIVS  501 (534)
Q Consensus       455 g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~-G~~ii~  501 (534)
                      ..... ....++.+.|   .-++|++....   ...+++.++++ +.++|+
T Consensus        82 ~~~~~-~~~~~~~e~~---~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~  128 (252)
T d1zmta1          82 APEFQ-PIDKYAVEDY---RGAVEALQIRPFALVNAVASQMKKRKSGHIIF  128 (252)
T ss_dssp             CCCCC-CGGGSCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCCCC-ChhhCCHHHH---HHHHHHHhHHHHHHHHHHHHhhcccccceeec
Confidence            42111 1112222323   34556654321   23555666554 346665

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=98.12  E-value=6.8e-07  Score=85.43  Aligned_cols=75  Identities=19%  Similarity=0.209  Sum_probs=52.5

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH---HcC-c----cccc----cccccc------C
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAET---VGG-H----ALSL----ADLENF------N  441 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~---~~~-~----~~~~----~~~~~~------~  441 (534)
                      +++||+++|+|+ +|+|+++|..|++.|++|+++.|+.++.+++++.   ... .    ..++    +++.++      .
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            578999999999 7999999999999999998888876665555432   221 1    1111    111110      2


Q ss_pred             CCCceEEEEcCCCC
Q 009464          442 PEDGMILANTTSIG  455 (534)
Q Consensus       442 ~~~~divVn~t~~g  455 (534)
                      .+..|+|||+++..
T Consensus        82 ~g~iDilvnnAG~~   95 (254)
T d1sbya1          82 LKTVDILINGAGIL   95 (254)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEeCCCCC
Confidence            46789999999853

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=3e-06  Score=80.11  Aligned_cols=49  Identities=24%  Similarity=0.359  Sum_probs=46.1

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG  429 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~  429 (534)
                      .++||.+||+|+ +|+|+++|..|++.|++|++++|+.+++++++++++.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   51 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN   51 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC
Confidence            478999999999 7999999999999999999999999999999999864

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=4.6e-06  Score=79.51  Aligned_cols=48  Identities=31%  Similarity=0.471  Sum_probs=43.8

Q ss_pred             ccCCcEEEEEcC-chhHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHHHHc
Q 009464          381 ALAGKLFVVIGA-GGAGKALAYGAKA---KGARVVIANRTYDRARELAETVG  428 (534)
Q Consensus       381 ~l~~k~vlVlGa-GG~graia~~L~~---~G~~v~i~~R~~~~a~~la~~~~  428 (534)
                      .++||.++|+|+ +|+|+++|..|++   .|++|++++|+.++++++++++.
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~   54 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELG   54 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHH
Confidence            578999999999 7999999999986   68999999999999999988774

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=98.00  E-value=5.4e-06  Score=79.35  Aligned_cols=74  Identities=15%  Similarity=0.242  Sum_probs=52.2

Q ss_pred             cCCcEEEEEcC-c--hhHHHHHHHHHHCCCeEEEEeCCHH---HHHHHHHHHcCcc---ccc----------ccccccCC
Q 009464          382 LAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYD---RARELAETVGGHA---LSL----------ADLENFNP  442 (534)
Q Consensus       382 l~~k~vlVlGa-G--G~graia~~L~~~G~~v~i~~R~~~---~a~~la~~~~~~~---~~~----------~~~~~~~~  442 (534)
                      |+||++||+|+ |  |+|+++|.+|+++|++|++++|+.+   +++++.+......   .+.          +++.+ ..
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK-DL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH-Hc
Confidence            67999999997 5  8999999999999999999999853   3444444432211   111          11112 35


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      +..|++||+++...
T Consensus        82 g~id~lV~nag~~~   95 (274)
T d2pd4a1          82 GSLDFIVHSVAFAP   95 (274)
T ss_dssp             SCEEEEEECCCCCC
T ss_pred             CCCCeEEeeccccc
Confidence            78999999987653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.98  E-value=4.1e-06  Score=79.84  Aligned_cols=75  Identities=17%  Similarity=0.213  Sum_probs=54.7

Q ss_pred             ccCCcEEEEEcC-c--hhHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHcCcc----ccccc----------ccc-c-
Q 009464          381 ALAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYDRA-RELAETVGGHA----LSLAD----------LEN-F-  440 (534)
Q Consensus       381 ~l~~k~vlVlGa-G--G~graia~~L~~~G~~v~i~~R~~~~a-~~la~~~~~~~----~~~~~----------~~~-~-  440 (534)
                      -++||++||+|| |  |+|+++|..|+++|++|++++|+.++. +++++.++...    +++.+          +.+ + 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            368999999996 4  799999999999999999999998775 55666665322    11111          111 0 


Q ss_pred             CCCCceEEEEcCCCC
Q 009464          441 NPEDGMILANTTSIG  455 (534)
Q Consensus       441 ~~~~~divVn~t~~g  455 (534)
                      .....|++||+++..
T Consensus        83 ~~~~ld~~i~~ag~~   97 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFM   97 (268)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             cCCCcceeeeccccc
Confidence            245689999999865

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.96  E-value=3.6e-06  Score=81.54  Aligned_cols=41  Identities=27%  Similarity=0.319  Sum_probs=36.9

Q ss_pred             cccCCcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCCHHHH
Q 009464          380 SALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRA  420 (534)
Q Consensus       380 ~~l~~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~~~~a  420 (534)
                      .+++||++||+|++   |+|+++|..|+++|++|++.+|+.+..
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~   47 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALN   47 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhh
Confidence            57899999999984   899999999999999999999986543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.90  E-value=3.3e-06  Score=80.14  Aligned_cols=72  Identities=22%  Similarity=0.302  Sum_probs=53.3

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc----ccccc---cccc------C--CCCc
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA----LSLAD---LENF------N--PEDG  445 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~----~~~~~---~~~~------~--~~~~  445 (534)
                      .|+|||+|| +|+|+++|..|++.|+  +|++.+|+.++++++.+..+...    +++.+   +.++      .  ....
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            589999999 7999999999999996  68889999999998876554321    12221   1110      1  1248


Q ss_pred             eEEEEcCCCC
Q 009464          446 MILANTTSIG  455 (534)
Q Consensus       446 divVn~t~~g  455 (534)
                      |++||++++.
T Consensus        83 dilinnAG~~   92 (250)
T d1yo6a1          83 SLLINNAGVL   92 (250)
T ss_dssp             CEEEECCCCC
T ss_pred             EEEEEcCccc
Confidence            9999999875

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.88  E-value=2.5e-06  Score=68.41  Aligned_cols=37  Identities=24%  Similarity=0.260  Sum_probs=34.2

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +++||+++|+|.|.+|+++|..|.+.|++|++++.+.
T Consensus         2 ~~~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~   38 (93)
T d2jfga1           2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM   38 (93)
T ss_dssp             CCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSS
T ss_pred             CcCCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCc
Confidence            5789999999999999999999999999999999754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.85  E-value=5.5e-06  Score=78.66  Aligned_cols=70  Identities=23%  Similarity=0.233  Sum_probs=50.8

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH-HHHHHHHHHcC----ccc----cc-c-------------cccccC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGG----HAL----SL-A-------------DLENFN  441 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~-~a~~la~~~~~----~~~----~~-~-------------~~~~~~  441 (534)
                      .+||+|+ +|+|+++|.+|+++|++|++++|+.+ .++++++++..    ...    +. .             ...+ .
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR-A   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH-H
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHH-H
Confidence            6899999 79999999999999999999998855 46777776631    110    00 0             0111 2


Q ss_pred             CCCceEEEEcCCCCC
Q 009464          442 PEDGMILANTTSIGM  456 (534)
Q Consensus       442 ~~~~divVn~t~~g~  456 (534)
                      .+..|++||++++..
T Consensus        82 ~g~iDilvnnAG~~~   96 (266)
T d1mxha_          82 FGRCDVLVNNASAYY   96 (266)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             hCCCCEEEECCccCC
Confidence            467899999998753

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.78  E-value=6.9e-06  Score=77.68  Aligned_cols=72  Identities=17%  Similarity=0.285  Sum_probs=51.0

Q ss_pred             cEEEEEcC-chhHHHHHHHHH---HCCCeEEEEeCCHHHHHHHHHHHc--Ccc----ccccc---cccc--------CCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAK---AKGARVVIANRTYDRARELAETVG--GHA----LSLAD---LENF--------NPE  443 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~---~~G~~v~i~~R~~~~a~~la~~~~--~~~----~~~~~---~~~~--------~~~  443 (534)
                      |+|||+|| +|+|+++|..|.   +.|++|++++|+.++++++.+...  ...    +++.+   +.++        ..+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            78999999 799999999986   468899999999998877754332  111    22222   1110        235


Q ss_pred             CceEEEEcCCCCC
Q 009464          444 DGMILANTTSIGM  456 (534)
Q Consensus       444 ~~divVn~t~~g~  456 (534)
                      ..|++||++++..
T Consensus        83 ~iDiLvnNAg~~~   95 (248)
T d1snya_          83 GLNVLFNNAGIAP   95 (248)
T ss_dssp             CCSEEEECCCCCC
T ss_pred             CcceEEeeccccc
Confidence            6899999998753

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=2.4e-06  Score=82.87  Aligned_cols=114  Identities=16%  Similarity=0.226  Sum_probs=67.3

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEE---EEeCCHHH---HHHHHHHHcCc---c----cccccc---c----ccCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVV---IANRTYDR---ARELAETVGGH---A----LSLADL---E----NFNP  442 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~---i~~R~~~~---a~~la~~~~~~---~----~~~~~~---~----~~~~  442 (534)
                      .|.|||+|+ +|+|+++|..|++.|++++   +..|+.+.   .++.++.+...   .    +++.+.   .    ....
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            367788999 7999999999999998644   44565544   44445554321   1    122211   1    1123


Q ss_pred             CCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCC---hhHHHHHHHHCC-CeEecc
Q 009464          443 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK---ITRLLREAEESG-ATIVSG  502 (534)
Q Consensus       443 ~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~---~T~ll~~A~~~G-~~ii~G  502 (534)
                      +..|++||+++.+....  ...++.+.|   ..++|+|+...   ...+++.++++| ..+|+-
T Consensus        82 g~idilvnnag~~~~~~--~~~~~~e~~---~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~i  140 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGP--LEALGEDAV---ASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVT  140 (285)
T ss_dssp             SCCSEEEECCCCCCCSC--GGGSCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             cchhhhhhccccccccc--ccchhHhhh---hhhhhcchhHHHHHHHHHHHHHHHcCCCceEEE
Confidence            67899999998764322  122333333   45678887533   346667776654 456653

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.74  E-value=2.7e-05  Score=68.73  Aligned_cols=97  Identities=19%  Similarity=0.226  Sum_probs=71.4

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccc----cccccccCCCCceEEEEcCCCCCC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS----LADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~----~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      ....+++|+|+|-+|+.++.....+|++|++++++.++.+++...+......    -+.+.+ ....+|+||+++-+.-.
T Consensus        30 v~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~-~~~~aDivI~aalipG~  108 (168)
T d1pjca1          30 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIET-AVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHH-HHHTCSEEEECCCCTTS
T ss_pred             CCCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHH-hhccCcEEEEeeecCCc
Confidence            4567999999999999999999999999999999999999998887643211    112233 34568999998865322


Q ss_pred             CCCCCCCCCcc---ccCCCCEEEEEec
Q 009464          458 PKVDETPIPKH---ALGHYALVFDAVY  481 (534)
Q Consensus       458 ~~~~~~~i~~~---~l~~~~~v~Dv~y  481 (534)
                      +  .+..+..+   .++++.+++|+.-
T Consensus       109 ~--aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         109 R--APILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             S--CCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             c--cCeeecHHHHhhcCCCcEEEEeec
Confidence            1  12224443   4578899999975

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=97.71  E-value=1.6e-05  Score=76.24  Aligned_cols=43  Identities=30%  Similarity=0.441  Sum_probs=36.7

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEe-CCHHHHHHHHHHHc
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG  428 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~-R~~~~a~~la~~~~  428 (534)
                      .+||+|+ +|+|+++|..|++.|++|++.. |+.++++++.+++.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~   48 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN   48 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHH
Confidence            6899999 7999999999999999998864 56778888877764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=2.3e-05  Score=74.14  Aligned_cols=74  Identities=16%  Similarity=0.182  Sum_probs=51.4

Q ss_pred             cCCcEEEEEcC-c--hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH---cCcc---ccc----------ccccccCC
Q 009464          382 LAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA---LSL----------ADLENFNP  442 (534)
Q Consensus       382 l~~k~vlVlGa-G--G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~---~~~~---~~~----------~~~~~~~~  442 (534)
                      |+||++||+|+ |  |+|+++|..|++.|++|++.+|+.+..+.+.+..   +...   .+.          .+..+ ..
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-VW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-TC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhh-cc
Confidence            67999999998 5  7999999999999999999999865443332222   2111   011          11112 45


Q ss_pred             CCceEEEEcCCCCC
Q 009464          443 EDGMILANTTSIGM  456 (534)
Q Consensus       443 ~~~divVn~t~~g~  456 (534)
                      ...|++||+++...
T Consensus        82 ~~~d~~v~~a~~~~   95 (258)
T d1qsga_          82 PKFDGFVHSIGFAP   95 (258)
T ss_dssp             SSEEEEEECCCCCC
T ss_pred             cccceEEEeecccc
Confidence            67899999987654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.68  E-value=2.6e-05  Score=69.32  Aligned_cols=43  Identities=26%  Similarity=0.416  Sum_probs=39.2

Q ss_pred             EEEEE-cCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc
Q 009464          386 LFVVI-GAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG  428 (534)
Q Consensus       386 ~vlVl-GaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~  428 (534)
                      |+.|+ |+|++|+++|..|++.|++|++++|++++++++++++.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~   45 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYR   45 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46777 67999999999999999999999999999999988875

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=97.67  E-value=0.00057  Score=62.16  Aligned_cols=126  Identities=22%  Similarity=0.285  Sum_probs=86.7

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  436 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~  436 (534)
                      +.|...+++..++.. |     ..+++||+++|-|.|.+|+.++..|.+.|++|++++.+.++..... .++.+....++
T Consensus         6 a~Gv~~~~~~~~~~~-g-----~~~L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~~~~~~~   78 (201)
T d1c1da1           6 AVGVFEAMKATVAHR-G-----LGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTAVALED   78 (201)
T ss_dssp             HHHHHHHHHHHHHHT-T-----CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEECCGGG
T ss_pred             HHHHHHHHHHHHHHh-C-----CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhcccccCccc
Confidence            578888877654431 1     1368999999999999999999999999999999999988876543 34444444444


Q ss_pred             ccccCCCCceEEEEcCCCCCCCCCCCCCCCcc---ccCCCCEEEEEecCCChhH-HHHHHHHCCCeEec
Q 009464          437 LENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVYTPKITR-LLREAEESGATIVS  501 (534)
Q Consensus       437 ~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~---~l~~~~~v~Dv~y~p~~T~-ll~~A~~~G~~ii~  501 (534)
                      +-.   ..+||++-|+.-+.        +..+   .+ +..+++...-+|..++ .-+..+++|+.+++
T Consensus        79 ~~~---~~~DI~iPcA~~~~--------I~~~~a~~i-~ak~i~e~AN~p~~~~~~~~~L~~rgI~~iP  135 (201)
T d1c1da1          79 VLS---TPCDVFAPCAMGGV--------ITTEVARTL-DCSVVAGAANNVIADEAASDILHARGILYAP  135 (201)
T ss_dssp             GGG---CCCSEEEECSCSCC--------BCHHHHHHC-CCSEECCSCTTCBCSHHHHHHHHHTTCEECC
T ss_pred             ccc---ccceeeeccccccc--------ccHHHHhhh-hhheeeccCCCCcchhhHHHHhcccceEEEe
Confidence            332   36899998764221        2222   23 2356777766776555 44566889987665

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.59  E-value=2.6e-05  Score=68.74  Aligned_cols=112  Identities=13%  Similarity=0.135  Sum_probs=74.4

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  464 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~  464 (534)
                      ++|-|+|.|-||.++|..|.+.|++|+++||+.++.+.+.+.-....   .+..+ .....|+++-+.+...... ....
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~---~~~~e-~~~~~diii~~v~~~~~~~-~v~~   76 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA---RSARD-AVQGADVVISMLPASQHVE-GLYL   76 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC---SSHHH-HHTSCSEEEECCSCHHHHH-HHHH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcccc---chhhh-hccccCeeeecccchhhHH-HHHh
Confidence            46899999999999999999999999999999999887765422111   12222 2345789988776431100 0000


Q ss_pred             -C--CccccCCCCEEEEEecC-CCh-hHHHHHHHHCCCeEec
Q 009464          465 -I--PKHALGHYALVFDAVYT-PKI-TRLLREAEESGATIVS  501 (534)
Q Consensus       465 -i--~~~~l~~~~~v~Dv~y~-p~~-T~ll~~A~~~G~~ii~  501 (534)
                       .  ....+.++.+++|..-. |.. ..+.+.++++|..+++
T Consensus        77 ~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~d  118 (162)
T d3cuma2          77 DDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD  118 (162)
T ss_dssp             STTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             ccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEEe
Confidence             0  01235677899999865 332 3666677888887664

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.57  E-value=1.6e-05  Score=70.02  Aligned_cols=110  Identities=13%  Similarity=0.159  Sum_probs=73.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++-|+|.|-||.++|..|++.|++|+++||+.++++++.+.......+..+    .....|+++-+.+-...  ....-+
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e----~~~~~d~ii~~v~~~~~--v~~v~~   75 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKA----IAEQCDVIITMLPNSPH--VKEVAL   75 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHH----HHHHCSEEEECCSSHHH--HHHHHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHH----HHhCCCeEEEEcCCHHH--HHHHHh
Confidence            578999999999999999999999999999999998887643211112222    22357999988763210  000000


Q ss_pred             C----ccccCCCCEEEEEecCCChh--HHHHHHHHCCCeEec
Q 009464          466 P----KHALGHYALVFDAVYTPKIT--RLLREAEESGATIVS  501 (534)
Q Consensus       466 ~----~~~l~~~~~v~Dv~y~p~~T--~ll~~A~~~G~~ii~  501 (534)
                      .    ...+.++.+++|+.-....+  .+.+.++++|..+++
T Consensus        76 ~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vd  117 (161)
T d1vpda2          76 GENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD  117 (161)
T ss_dssp             STTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCceec
Confidence            0    12346778999998764433  455566777887665

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.57  E-value=6.5e-06  Score=77.38  Aligned_cols=36  Identities=17%  Similarity=0.219  Sum_probs=32.8

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +||++||+|+ ||+|++++..|+++|++|++++|+..
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~   37 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN   37 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            4799999999 89999999999999999999988654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.57  E-value=5.7e-06  Score=77.67  Aligned_cols=35  Identities=23%  Similarity=0.264  Sum_probs=31.9

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +++|||+|+ ||+|++++..|+++|++|++++|+.+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~   37 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN   37 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCch
Confidence            357899999 89999999999999999999999865

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.57  E-value=8.9e-06  Score=76.84  Aligned_cols=70  Identities=19%  Similarity=0.184  Sum_probs=45.3

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHcCcccccccccccCCCCceEEEEcCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRA-RELAETVGGHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a-~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      |.|+|+|+ +|+|+++|..|++.|++|++++|+.++. +++.+..+......+...+ .....|++||++++.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~id~lv~~Ag~~   73 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAK-CSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTT-CTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHH-hCCCCcEEEEcCCCC
Confidence            68999999 8999999999999999999999875421 1111110000000111112 234689999998765

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.53  E-value=6.2e-05  Score=66.91  Aligned_cols=70  Identities=23%  Similarity=0.248  Sum_probs=52.6

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc------------cccccccccCCCCceEEEEcC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA------------LSLADLENFNPEDGMILANTT  452 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~------------~~~~~~~~~~~~~~divVn~t  452 (534)
                      |++.|+|+|.+|.++|..|++.|++|++++|++++.+.+.+.-....            ....+..+ ....+|++|-++
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL-AVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH-HHTTCSEEEECS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHh-HhcCCCEEEEEE
Confidence            78999999999999999999999999999999999888765432100            00112222 345689999988


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus        81 ~~~   83 (184)
T d1bg6a2          81 PAI   83 (184)
T ss_dssp             CGG
T ss_pred             chh
Confidence            754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.46  E-value=0.00015  Score=61.38  Aligned_cols=117  Identities=18%  Similarity=0.253  Sum_probs=74.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-----cccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-----~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      +++|+|+|-+|+.++..|.+.|.+|+++++++++.+++.++++...     .+.+-+.+.....+|.++.+|+-      
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~------   75 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK------   75 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC------
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCc------
Confidence            6899999999999999999999999999999999999988765432     22222333345678999887652      


Q ss_pred             CCCCCC----ccccCCCCEEEEEecCCChhHHHHHHHHCCCeEeccHHHHHHHHHH
Q 009464          461 DETPIP----KHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYE  512 (534)
Q Consensus       461 ~~~~i~----~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~~Qa~~  512 (534)
                      +...+.    ...+....+ +-.+.++...   ...++.|...+--.+++..+...
T Consensus        76 d~~N~~~~~~~k~~~~~~i-I~~~~~~~~~---~~l~~~G~d~vi~p~~~~a~~i~  127 (132)
T d1lssa_          76 EEVNLMSSLLAKSYGINKT-IARISEIEYK---DVFERLGVDVVVSPELIAANYIE  127 (132)
T ss_dssp             HHHHHHHHHHHHHTTCCCE-EEECSSTTHH---HHHHHTTCSEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCceE-EEEecCHHHH---HHHHHCCCCEEECHHHHHHHHHH
Confidence            111110    112333333 3445555544   44566788533335555555544

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=0.00028  Score=61.82  Aligned_cols=68  Identities=29%  Similarity=0.384  Sum_probs=52.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc-CcccccccccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~-~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ..+.||+++|+|.|-+||.+|..|...|++|+++++++-++-+  ..+. .....+++    .....|++|.+|+
T Consensus        20 ~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~--A~~dG~~v~~~~~----a~~~adivvtaTG   88 (163)
T d1li4a1          20 VMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQ--AAMEGYEVTTMDE----ACQEGNIFVTTTG   88 (163)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH--HHHTTCEECCHHH----HTTTCSEEEECSS
T ss_pred             ceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHH--hhcCceEeeehhh----hhhhccEEEecCC
Confidence            5688999999999999999999999999999999999876433  3333 23333333    3446799999887

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=97.46  E-value=0.00047  Score=63.99  Aligned_cols=131  Identities=16%  Similarity=0.165  Sum_probs=90.7

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  436 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~  436 (534)
                      +.|.+.+++..+....+     ..+++||+++|-|.|.+|+.+|..|.+.|++|++++.+..+.+.+....+....+.++
T Consensus        17 g~GV~~~~~~~~~~~~g-----~~~l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~   91 (230)
T d1leha1          17 AYGVYRGMKAAAKEAFG-----SDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNA   91 (230)
T ss_dssp             HHHHHHHHHHHHHHHHS-----SCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGG
T ss_pred             HHHHHHHHHHHHHHhcC-----CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCCcc
Confidence            56777776654432111     2468999999999999999999999999999999999999998888887766544444


Q ss_pred             ccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChh-HHHHHHHHCCCeEec
Q 009464          437 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT-RLLREAEESGATIVS  501 (534)
Q Consensus       437 ~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T-~ll~~A~~~G~~ii~  501 (534)
                      +-.   ..+||++-|+--+.-   +...  ...++ ..+++...-+|..| ...+..+++|+.+++
T Consensus        92 ~~~---~~cDIl~PcA~~~~I---~~~~--~~~l~-ak~Ive~ANn~~t~~ea~~~L~~rGI~~iP  148 (230)
T d1leha1          92 IYG---VTCDIFAPCALGAVL---NDFT--IPQLK-AKVIAGSADNQLKDPRHGKYLHELGIVYAP  148 (230)
T ss_dssp             TTT---CCCSEEEECSCSCCB---STTH--HHHCC-CSEECCSCSCCBSSHHHHHHHHHHTCEECC
T ss_pred             ccc---ccccEeccccccccc---ChHH--hhccC-ccEEEecccCCCCCchHHHHHHhhCcEEEe
Confidence            322   468999998753321   1111  12232 35777777666655 455566788986664

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.44  E-value=0.00016  Score=62.75  Aligned_cols=64  Identities=25%  Similarity=0.333  Sum_probs=51.0

Q ss_pred             EEEEEcCchhHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G-~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ++.++|+|-||.+++..|.+.| .+|++++|+.+++++++++++....  ++.+  .....|+||-|+.
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~--~~~~--~v~~~Div~lavk   66 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS--ATLP--ELHSDDVLILAVK   66 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE--SSCC--CCCTTSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc--cccc--cccccceEEEecC
Confidence            5789999999999999999888 5999999999999999998764332  2222  2345799998764

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.42  E-value=0.00024  Score=61.52  Aligned_cols=75  Identities=20%  Similarity=0.295  Sum_probs=56.3

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcC------cc--cccccccccCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG------HA--LSLADLENFNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~------~~--~~~~~~~~~~~~~~divVn~t  452 (534)
                      .++|+.|+|+|.+|.++|+.|+..|.  +|+++++++++++..+.++..      ..  ....+. + ....+|++|.++
T Consensus         5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-~-~l~daDvvvita   82 (148)
T d1ldna1           5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-D-DCRDADLVVICA   82 (148)
T ss_dssp             TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-G-GTTTCSEEEECC
T ss_pred             CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-H-HhccceeEEEec
Confidence            36789999999999999999999886  899999999998887776641      01  111222 2 356789999999


Q ss_pred             CCCCCCC
Q 009464          453 SIGMQPK  459 (534)
Q Consensus       453 ~~g~~~~  459 (534)
                      +....|.
T Consensus        83 g~~~~~~   89 (148)
T d1ldna1          83 GANQKPG   89 (148)
T ss_dssp             SCCCCTT
T ss_pred             ccccccC
Confidence            8765543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.41  E-value=0.00018  Score=62.16  Aligned_cols=74  Identities=19%  Similarity=0.316  Sum_probs=52.7

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCc------c-cccccccccCCCCceEEEEcCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH------A-LSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~------~-~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      .+|+.|+|+|.+|.++|+.|+..|.  +|+++++++++++..+.++..-      . ....+.+  ....+|++|.+++.
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--~~~~adivvitag~   82 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--DCKDADLVVITAGA   82 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--GGTTCSEEEECCCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--HhccccEEEEeccc
Confidence            4689999999999999999999884  8999999999988877666321      0 1111222  24568999999987


Q ss_pred             CCCCC
Q 009464          455 GMQPK  459 (534)
Q Consensus       455 g~~~~  459 (534)
                      ...|.
T Consensus        83 ~~~~g   87 (146)
T d1ez4a1          83 PQKPG   87 (146)
T ss_dssp             -----
T ss_pred             ccCCC
Confidence            65543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.39  E-value=3.8e-05  Score=68.62  Aligned_cols=141  Identities=18%  Similarity=0.124  Sum_probs=86.7

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-----ccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-----~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      +++-|+|.|-||.++|..|.+.|++|+++||++++++++.+.....     ....+++.+ .....|.++.+.+.+..  
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~-~~~~~~~ii~~~~~~~~--   79 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVS-KLKKPRRIILLVKAGQA--   79 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH-HBCSSCEEEECSCTTHH--
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhh-hhcccceEEEecCchHH--
Confidence            5789999999999999999999999999999999999997753211     112223322 23456777766543210  


Q ss_pred             CCCCCCCc---cccCCCCEEEEEecC-CChh-HHHHHHHHCCCeEe----ccHHHHHHHHHHHHHHhcCCCCCHHHHHHH
Q 009464          460 VDETPIPK---HALGHYALVFDAVYT-PKIT-RLLREAEESGATIV----SGLEMFIGQAYEQYERFTGLPAPKELFQKI  530 (534)
Q Consensus       460 ~~~~~i~~---~~l~~~~~v~Dv~y~-p~~T-~ll~~A~~~G~~ii----~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~  530 (534)
                        ...+..   ..++++.+++|+.-. |..+ .+.+..+++|..++    .|-..-...+. .+ +..|.+...+..+.+
T Consensus        80 --v~~v~~~l~~~~~~g~iiid~sT~~~~~~~~~~~~~~~~g~~~ldapvsGg~~~A~~G~-~~-~~gG~~~~~~~~~~i  155 (176)
T d2pgda2          80 --VDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP-SL-MPGGNKEAWPHIKAI  155 (176)
T ss_dssp             --HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EE-EEEECTTTHHHHHHH
T ss_pred             --HHHHHHHHHhccccCcEEEecCcchhHHHHHHHHHHHhcCCceeccccccCcccccCCc-EE-EcCCCHHHHHHHHHH
Confidence              001111   234677899999865 3333 55566777887654    34433333331 11 123555566666665


Q ss_pred             HH
Q 009464          531 MA  532 (534)
Q Consensus       531 ~~  532 (534)
                      +.
T Consensus       156 l~  157 (176)
T d2pgda2         156 FQ  157 (176)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.00046  Score=60.57  Aligned_cols=127  Identities=18%  Similarity=0.180  Sum_probs=86.5

Q ss_pred             HHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc
Q 009464          358 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  436 (534)
Q Consensus       358 ~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~  436 (534)
                      .|+++-|+..           +.++.||+++|+|-+ -.|+.++.-|.+.|+.|++++......++.             
T Consensus        22 ~aI~~lL~~y-----------~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~-------------   77 (166)
T d1b0aa1          22 RGIVTLLERY-----------NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH-------------   77 (166)
T ss_dssp             HHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH-------------
T ss_pred             HHHHHHHHHc-----------CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH-------------
Confidence            4666666542           357899999999997 589999999999999999998654332221             


Q ss_pred             ccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCCh-------hHHHHHHHHCCCe-Eecc------
Q 009464          437 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-------TRLLREAEESGAT-IVSG------  502 (534)
Q Consensus       437 ~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~-------T~ll~~A~~~G~~-ii~G------  502 (534)
                           ..++|++|.+++..   .    -+..++++++.+++|+-++..+       -.+-...+...+. -+.|      
T Consensus        78 -----~~~ADivI~a~G~p---~----~i~~~~vk~g~vvIDvGi~~~~~~~~~Gdvd~~~v~~~a~~~TPvPGGVGP~T  145 (166)
T d1b0aa1          78 -----VENADLLIVAVGKP---G----FIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMT  145 (166)
T ss_dssp             -----HHHCSEEEECSCCT---T----CBCTTTSCTTCEEEECCCEECTTSCEECSBCHHHHHHHCSEECCSSSSSHHHH
T ss_pred             -----HhhhhHhhhhccCc---c----cccccccCCCcEEEecCceecCCCCEEeccccHhHHhheeEeCCCCCcccHHH
Confidence                 12479999988742   1    2667899999999998765321       1122222333331 2333      


Q ss_pred             HHHHHHHHHHHHHHhcCC
Q 009464          503 LEMFIGQAYEQYERFTGL  520 (534)
Q Consensus       503 l~ml~~Qa~~qf~lwtg~  520 (534)
                      ..||....+.+++-|...
T Consensus       146 va~L~~N~v~a~~~~~~~  163 (166)
T d1b0aa1         146 VATLIENTLQACVEYHDP  163 (166)
T ss_dssp             HHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHHhCc
Confidence            378888889888888643

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.35  E-value=0.00042  Score=60.72  Aligned_cols=77  Identities=16%  Similarity=0.192  Sum_probs=57.8

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcC-cc-------cccccccccCCCCceEEEE
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG-HA-------LSLADLENFNPEDGMILAN  450 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~-~~-------~~~~~~~~~~~~~~divVn  450 (534)
                      ....+++.|+|+|.+|.++++.|...|.  +++++++++++++..+.++.. ..       ....+.+  .....|+||.
T Consensus        17 ~~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~--~~~~adiVVi   94 (160)
T d1i0za1          17 TVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS--VTANSKIVVV   94 (160)
T ss_dssp             CCCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG--GGTTCSEEEE
T ss_pred             cCCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh--hcccccEEEE
Confidence            3556799999999999999999999997  899999999999888777641 10       1112222  3456899999


Q ss_pred             cCCCCCCCC
Q 009464          451 TTSIGMQPK  459 (534)
Q Consensus       451 ~t~~g~~~~  459 (534)
                      +++....|.
T Consensus        95 tAg~~~~~g  103 (160)
T d1i0za1          95 TAGVRQQEG  103 (160)
T ss_dssp             CCSCCCCTT
T ss_pred             ecCCccccC
Confidence            998765543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.33  E-value=0.00023  Score=62.42  Aligned_cols=102  Identities=20%  Similarity=0.141  Sum_probs=64.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      ++.|+|+|-||.++|..|.+.|.+|++++|+.++++++.+. +......++++  ....+|+||-++|....... ...+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~-~~~~~~~~~~~--~~~~~DiIilavp~~~~~~v-l~~l   77 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER-QLVDEAGQDLS--LLQTAKIIFLCTPIQLILPT-LEKL   77 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TSCSEEESCGG--GGTTCSEEEECSCHHHHHHH-HHHH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHh-hccceeeeecc--cccccccccccCcHhhhhhh-hhhh
Confidence            58899999999999999999999999999999887765443 21111112222  34568999998874311000 0001


Q ss_pred             CccccCCCCEEEEEecCCChhHHHHHHHH
Q 009464          466 PKHALGHYALVFDAVYTPKITRLLREAEE  494 (534)
Q Consensus       466 ~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~  494 (534)
                       ...+.+..++.|+.-.  .....+.+.+
T Consensus        78 -~~~l~~~~iv~~~~s~--~~~~~~~~~~  103 (165)
T d2f1ka2          78 -IPHLSPTAIVTDVASV--KTAIAEPASQ  103 (165)
T ss_dssp             -GGGSCTTCEEEECCSC--CHHHHHHHHH
T ss_pred             -hhhcccccceeecccc--chHHHHHHHH
Confidence             1235677889888633  2333444444

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=2.1e-05  Score=71.82  Aligned_cols=70  Identities=19%  Similarity=0.157  Sum_probs=50.0

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-----cccccccccccCCCCceEEEEcCCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-----~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      .|+++|+|| |.+|++++..|.+.|++|+++.|+.++....... +.     +..+.+++.+ .+.+.|+||++++..
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~gD~~d~~~l~~-al~~~d~vi~~~g~~   78 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR-PAHVVVGDVLQAADVDK-TVAGQDAVIVLLGTR   78 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCC-CSEEEESCTTSHHHHHH-HHTTCSEEEECCCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccc-ccccccccccchhhHHH-HhcCCCEEEEEeccC
Confidence            478999998 9999999999999999999999998875432110 01     1112223333 356789999998753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=97.32  E-value=0.00038  Score=60.72  Aligned_cols=68  Identities=28%  Similarity=0.365  Sum_probs=53.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC-cccccccccccCCCCceEEEEcCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~-~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      .-+.||+++|+|-|-.||.+|..|...|++|+|+..++-++-+.  .+.. +..+++   + .....|++|.+|+
T Consensus        19 ~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA--~mdGf~v~~~~---~-a~~~aDi~vTaTG   87 (163)
T d1v8ba1          19 FLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA--VMEGFNVVTLD---E-IVDKGDFFITCTG   87 (163)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH--HTTTCEECCHH---H-HTTTCSEEEECCS
T ss_pred             ceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHH--HhcCCccCchh---H-ccccCcEEEEcCC
Confidence            56789999999999999999999999999999999999765333  3322 233333   3 3456899999997

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.31  E-value=0.00016  Score=68.15  Aligned_cols=74  Identities=19%  Similarity=0.269  Sum_probs=50.8

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCH---HHHHHHHHHHc---Ccc----ccccc---cc----cc-CCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTY---DRARELAETVG---GHA----LSLAD---LE----NF-NPE  443 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~---~~a~~la~~~~---~~~----~~~~~---~~----~~-~~~  443 (534)
                      ++++||+|+ ||+|+++|..|++.|+ +|++++|+.   +.++++.+++.   ...    +++.+   +.    .. ...
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            569999998 8999999999999999 799999974   34556655542   211    12211   11    10 224


Q ss_pred             CceEEEEcCCCCCC
Q 009464          444 DGMILANTTSIGMQ  457 (534)
Q Consensus       444 ~~divVn~t~~g~~  457 (534)
                      ..|.|||++++...
T Consensus        89 ~i~~vv~~ag~~~~  102 (259)
T d2fr1a1          89 PLSAVFHAAATLDD  102 (259)
T ss_dssp             CEEEEEECCCCCCC
T ss_pred             cccccccccccccc
Confidence            68999999987643

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.29  E-value=0.00021  Score=58.71  Aligned_cols=41  Identities=20%  Similarity=0.283  Sum_probs=36.7

Q ss_pred             cccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          378 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       378 ~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      ...+++||+++|+|+|.+|..-+..|.+.|++|++++....
T Consensus         6 i~l~l~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           6 IFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EEECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             eEEEeCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            44678999999999999999999999999999999987654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=0.00064  Score=59.46  Aligned_cols=76  Identities=20%  Similarity=0.197  Sum_probs=57.3

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCc--c------cccccccccCCCCceEEEEc
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH--A------LSLADLENFNPEDGMILANT  451 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~--~------~~~~~~~~~~~~~~divVn~  451 (534)
                      ++..++.|+|+|.+|..+|+.|...|.  ++++++++.++++..+.++...  .      ....+.+  .....|++|.+
T Consensus        17 ~~~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~--~~~~adivvit   94 (159)
T d2ldxa1          17 LSRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN--VSANSKLVIIT   94 (159)
T ss_dssp             CCCCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG--GGTTEEEEEEC
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh--hhccccEEEEe
Confidence            455689999999999999999999986  7999999999988877776410  0      1112222  34678999999


Q ss_pred             CCCCCCCC
Q 009464          452 TSIGMQPK  459 (534)
Q Consensus       452 t~~g~~~~  459 (534)
                      ++....|.
T Consensus        95 ag~~~~~~  102 (159)
T d2ldxa1          95 AGARMVSG  102 (159)
T ss_dssp             CSCCCCTT
T ss_pred             cccccCCC
Confidence            98876654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.25  E-value=0.00015  Score=63.13  Aligned_cols=87  Identities=17%  Similarity=0.202  Sum_probs=61.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc-ccccccccCCCCceEEEEcCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDETP  464 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~  464 (534)
                      ++.++|+|-||.+++..|.+.|.++++++|+.++.++++++++.... +.+++    ....|+|+-|+.....     ..
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~----~~~~dvIilavkp~~~-----~~   72 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDL----IDQVDLVILGIKPQLF-----ET   72 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHH----HHTCSEEEECSCGGGH-----HH
T ss_pred             EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhh----hhccceeeeecchHhH-----HH
Confidence            57899999999999999999999999999999999999998875432 22222    2357999977642110     00


Q ss_pred             CCccccCCCCEEEEEecC
Q 009464          465 IPKHALGHYALVFDAVYT  482 (534)
Q Consensus       465 i~~~~l~~~~~v~Dv~y~  482 (534)
                      + ...+.++..++++.-.
T Consensus        73 v-l~~l~~~~~iis~~ag   89 (152)
T d2ahra2          73 V-LKPLHFKQPIISMAAG   89 (152)
T ss_dssp             H-HTTSCCCSCEEECCTT
T ss_pred             H-hhhcccceeEeccccc
Confidence            1 1224556677777643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.21  E-value=0.0001  Score=62.29  Aligned_cols=69  Identities=17%  Similarity=0.191  Sum_probs=50.4

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----cccccccccccCCCCceEEEEcCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      |+.+|+|.|-+|+.++..|.+.|.+|++++.++++++++.+....    +..+.+.+.+....++|.+|-+++
T Consensus         1 k~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcC
Confidence            568999999999999999999999999999999999887654321    111111222223456788887765

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00048  Score=60.66  Aligned_cols=71  Identities=24%  Similarity=0.291  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCccc-ccc--c---cc----ccCCCCceEEEEc
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHAL-SLA--D---LE----NFNPEDGMILANT  451 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~-~~~--~---~~----~~~~~~~divVn~  451 (534)
                      .+.+++|+|+|++|..++..+...|+ +|++++++++|.+ ++++++.+.. ...  +   ..    .-....+|++|++
T Consensus        26 ~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~-~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~  104 (171)
T d1pl8a2          26 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLS-KAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC  104 (171)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHH-HHHHhCCcccccccccccccccccccccCCCCceEEEec
Confidence            46799999999999999999999999 8999999999875 5678875431 111  1   10    0012468999999


Q ss_pred             CCC
Q 009464          452 TSI  454 (534)
Q Consensus       452 t~~  454 (534)
                      ++.
T Consensus       105 ~G~  107 (171)
T d1pl8a2         105 TGA  107 (171)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            874

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.18  E-value=0.00019  Score=70.47  Aligned_cols=41  Identities=12%  Similarity=0.186  Sum_probs=35.0

Q ss_pred             CcEEEEEcCc---hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 009464          384 GKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRARELA  424 (534)
Q Consensus       384 ~k~vlVlGaG---G~graia~~L~~~G~~v~i~~R~~~~a~~la  424 (534)
                      +|.+||+|+|   |+|+++|.+|++.|++|++..|+........
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~   45 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMK   45 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhH
Confidence            6899999964   9999999999999999999998876544443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.17  E-value=0.00043  Score=60.86  Aligned_cols=72  Identities=19%  Similarity=0.204  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc---ccccCCCCceEEEEcCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD---LENFNPEDGMILANTTSIG  455 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~---~~~~~~~~~divVn~t~~g  455 (534)
                      .|.+++|+|+|++|..++..+...|++|++++++.+|.+ .+++++.+. .+..+   ..+.....+|.++++++.+
T Consensus        27 ~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~-~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          27 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred             CCCEEEEECCCCcchhHHHHhhhccccccccccchhHHH-HhhccCCcEEeeccchHHHHHhhhcccceEEEEecCC
Confidence            578999999999999999988899999999999988875 456777542 22211   1111345689999987754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.16  E-value=0.00079  Score=58.26  Aligned_cols=74  Identities=16%  Similarity=0.145  Sum_probs=55.2

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc-------c-cccccccccCCCCceEEEEcCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-------A-LSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~-------~-~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      .|+.|+|+|.+|.++++.|...+. ++.+++++.++++..+.++...       . ....+..+ ....+|++|.+++..
T Consensus         4 ~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~-~~~~advvvitag~~   82 (150)
T d1t2da1           4 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYD-DLAGADVVIVTAGFT   82 (150)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGG-GGTTCSEEEECCSCS
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccccc-ccCCCcEEEEecccc
Confidence            579999999999999999988888 9999999998888877666421       0 11111122 346789999999987


Q ss_pred             CCCC
Q 009464          456 MQPK  459 (534)
Q Consensus       456 ~~~~  459 (534)
                      ..|.
T Consensus        83 ~~~g   86 (150)
T d1t2da1          83 KAPG   86 (150)
T ss_dssp             SCTT
T ss_pred             cCCC
Confidence            6553

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=97.16  E-value=0.00011  Score=63.67  Aligned_cols=62  Identities=29%  Similarity=0.344  Sum_probs=43.3

Q ss_pred             EEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          388 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       388 lVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      =++|+|-||++++..|.+.+..+.|+||+.++++++++.++....+..   + .....|+|+-|++
T Consensus         3 gfIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~---~-~~~~~DiVil~v~   64 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLE---K-HPELNGVVFVIVP   64 (153)
T ss_dssp             EEESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSC---C-CCC---CEEECSC
T ss_pred             EEEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchh---h-hhccCcEEEEecc
Confidence            489999999999998866444557899999999999998875443332   3 3455788888776

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.0003  Score=63.60  Aligned_cols=40  Identities=35%  Similarity=0.391  Sum_probs=36.1

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA  424 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la  424 (534)
                      |++.|+|+|-||+++|..++..|++|++++++.+.++...
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence            7899999999999999999999999999999998655443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.0012  Score=57.87  Aligned_cols=71  Identities=25%  Similarity=0.296  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc---ccccCCCCceEEEEcCCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD---LENFNPEDGMILANTTSIG  455 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~---~~~~~~~~~divVn~t~~g  455 (534)
                      .|.+|+|+|+|++|..++..+...|+++++++++.++. +++++++.+. .+..+   ... ....+|+++++++..
T Consensus        30 ~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~lGad~~i~~~~~~~~~~-~~~~~D~vid~~g~~  104 (168)
T d1uufa2          30 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAA-HLKSFDFILNTVAAP  104 (168)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTCSEEEETTCHHHHHT-TTTCEEEEEECCSSC
T ss_pred             CCCEEEEeccchHHHHHHHHhhcccccchhhccchhHH-HHHhccCCcEEEECchhhHHHH-hcCCCceeeeeeecc
Confidence            47899999999999999999999999888899988875 5677887542 22211   112 345799999998743

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.14  E-value=0.00067  Score=59.46  Aligned_cols=71  Identities=28%  Similarity=0.340  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccc----c-------ccccCCCCceEEEE
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA----D-------LENFNPEDGMILAN  450 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~----~-------~~~~~~~~~divVn  450 (534)
                      .|.+++|+|+|++|..++..+...|++|++++++.+|. +++++++... ...+    +       +.+.....+|++|+
T Consensus        26 ~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~-~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid  104 (170)
T d1e3ja2          26 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID  104 (170)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred             CCCEEEEEcccccchhhHhhHhhhcccccccchHHHHH-HHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeee
Confidence            46799999999999999999999999999999999986 5556666432 1111    1       11102346899999


Q ss_pred             cCCC
Q 009464          451 TTSI  454 (534)
Q Consensus       451 ~t~~  454 (534)
                      +++.
T Consensus       105 ~~g~  108 (170)
T d1e3ja2         105 CSGN  108 (170)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9874

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.11  E-value=0.001  Score=57.10  Aligned_cols=72  Identities=24%  Similarity=0.352  Sum_probs=53.1

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCc-------cc-ccccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH-------AL-SLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~-------~~-~~~~~~~~~~~~~divVn~t~~  454 (534)
                      .|+.|+|+|.+|.++|+.|...|.  +++++++++++++..+.++..-       .. ..++.+  .....|+||.+++.
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~--~~~daDvVVitaG~   79 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE--ICRDADMVVITAGP   79 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG--GGTTCSEEEECCCC
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHH--HhhCCcEEEEeccc
Confidence            368999999999999999999986  8999999999887766655310       01 112222  24568999999987


Q ss_pred             CCCC
Q 009464          455 GMQP  458 (534)
Q Consensus       455 g~~~  458 (534)
                      ...|
T Consensus        80 ~~~~   83 (143)
T d1llda1          80 RQKP   83 (143)
T ss_dssp             CCCT
T ss_pred             ccCC
Confidence            6544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.09  E-value=0.00065  Score=60.20  Aligned_cols=71  Identities=25%  Similarity=0.243  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc-cccccc------cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-ALSLAD------LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~-~~~~~~------~~~~-~~~~~divVn~t~  453 (534)
                      .|.+|+|+|+||+|..++..+...|+ +|++++++++|. +++++++.. .++..+      +.+. .-..+|++|+|++
T Consensus        27 ~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~-~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g  105 (174)
T d1jqba2          27 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICV-EAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGG  105 (174)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHH-HHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSS
T ss_pred             CCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhH-HHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccC
Confidence            47789999999999999999999999 899999999884 556777753 222221      1111 1235899999997


Q ss_pred             C
Q 009464          454 I  454 (534)
Q Consensus       454 ~  454 (534)
                      .
T Consensus       106 ~  106 (174)
T d1jqba2         106 G  106 (174)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.09  E-value=0.0006  Score=58.78  Aligned_cols=69  Identities=19%  Similarity=0.230  Sum_probs=52.0

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc--------cccccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA--------LSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~--------~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      |++.|+|+|.+|.++++.|...|.  +++++++++++++..+.++....        ....+.+  ....+|+||-++|.
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~--~l~~adiVVitaG~   79 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA--ALADADVVISTLGN   79 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG--GGTTCSEEEECCSC
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHH--HhccccEEEEeccc
Confidence            689999999999999999999885  89999999999887776664110        1111222  34568999999886


Q ss_pred             C
Q 009464          455 G  455 (534)
Q Consensus       455 g  455 (534)
                      .
T Consensus        80 ~   80 (146)
T d1hyha1          80 I   80 (146)
T ss_dssp             G
T ss_pred             c
Confidence            4

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.07  E-value=0.0002  Score=64.62  Aligned_cols=42  Identities=29%  Similarity=0.309  Sum_probs=39.0

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  426 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~  426 (534)
                      +++.|+|+|..|.|+|..|++.|.+|+++.|+++.++++.+.
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            579999999999999999999999999999999999888765

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.06  E-value=0.00034  Score=60.96  Aligned_cols=76  Identities=16%  Similarity=0.129  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc------c--cc-cccccccCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH------A--LS-LADLENFNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~------~--~~-~~~~~~~~~~~~divVn~t  452 (534)
                      +.+|+.|+|+|.+|..+++.|+..|. ++++++.++++++..+..+...      .  .. -.+.++ ....+|+||.++
T Consensus         6 k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~adiVvita   84 (154)
T d1pzga1           6 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEA-ALTGADCVIVTA   84 (154)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHH-HHTTCSEEEECC
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhh-hhcCCCeEEEec
Confidence            45789999999999999999998887 9999999998888777665310      0  00 011112 245689999999


Q ss_pred             CCCCCCC
Q 009464          453 SIGMQPK  459 (534)
Q Consensus       453 ~~g~~~~  459 (534)
                      +.+..|.
T Consensus        85 g~~~~~g   91 (154)
T d1pzga1          85 GLTKVPG   91 (154)
T ss_dssp             SCSSCTT
T ss_pred             ccccCCC
Confidence            8876553

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.06  E-value=0.00093  Score=57.06  Aligned_cols=73  Identities=18%  Similarity=0.182  Sum_probs=52.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcC------cccccccccccCCCCceEEEEcCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG------HALSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~------~~~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      |+.|+|+|.+|.++++.|+..|.  ++.++++++++++..+.++..      ......+..+ ....+|++|.+++....
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~-~~~~adivvitag~~~~   80 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYA-DLKGSDVVIVAAGVPQK   80 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGG-GGTTCSEEEECCCCCCC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHH-HhcCCCEEEEecccccC
Confidence            67899999999999999998885  899999999988877665531      1100111112 34678999999987655


Q ss_pred             CC
Q 009464          458 PK  459 (534)
Q Consensus       458 ~~  459 (534)
                      |.
T Consensus        81 ~g   82 (140)
T d1a5za1          81 PG   82 (140)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.05  E-value=0.00023  Score=63.98  Aligned_cols=117  Identities=24%  Similarity=0.212  Sum_probs=77.5

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      +..+.+|++.|+|.|.+|+.++..+...|++|+.++|...+....  ....+..++++    .+..+|+|+.++|.... 
T Consensus        39 ~~~l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~--~~~~~~~~l~e----ll~~sDiv~~~~Plt~~-  111 (184)
T d1ygya1          39 GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA--QLGIELLSLDD----LLARADFISVHLPKTPE-  111 (184)
T ss_dssp             BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH--HHTCEECCHHH----HHHHCSEEEECCCCSTT-
T ss_pred             cccccceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHHh--hcCceeccHHH----HHhhCCEEEEcCCCCch-
Confidence            346789999999999999999999999999999999876543332  22222233333    23457999999987532 


Q ss_pred             CCCCCCCCccc---cCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHH
Q 009464          459 KVDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLE  504 (534)
Q Consensus       459 ~~~~~~i~~~~---l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~  504 (534)
                        ...-+..+.   ++++.+++.+.-.+. +..-+..|.+.|--.--+++
T Consensus       112 --T~~lin~~~l~~mk~~a~lIN~sRG~iVde~aL~~aL~~~~i~~a~lD  159 (184)
T d1ygya1         112 --TAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLD  159 (184)
T ss_dssp             --TTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEES
T ss_pred             --hhhhhhHHHHhhhCCCceEEEecchhhhhhHHHHHHHhcCcEeEEEEe
Confidence              122355443   456778888876655 45566666666643333343

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.02  E-value=0.00074  Score=59.15  Aligned_cols=102  Identities=12%  Similarity=0.089  Sum_probs=64.4

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      |+++|+|.|-||.++|++|.+.|.  +|+.++|+.+..+.+.+. +.......+........+|+||-|+|......   
T Consensus         2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~-~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~---   77 (171)
T d2g5ca2           2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GIIDEGTTSIAKVEDFSPDFVMLSSPVRTFRE---   77 (171)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSCSEEESCGGGGGGTCCSEEEECSCHHHHHH---
T ss_pred             CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHh-hcchhhhhhhhhhhccccccccccCCchhhhh---
Confidence            479999999999999999999996  799999998877665443 22111111111112235799999998542100   


Q ss_pred             CCCC--ccccCCCCEEEEEecCCChhHHHHHHH
Q 009464          463 TPIP--KHALGHYALVFDAVYTPKITRLLREAE  493 (534)
Q Consensus       463 ~~i~--~~~l~~~~~v~Dv~y~p~~T~ll~~A~  493 (534)
                       .+.  ...+++..++.|+...  .+...+.++
T Consensus        78 -vl~~l~~~~~~~~ii~d~~s~--k~~~~~~~~  107 (171)
T d2g5ca2          78 -IAKKLSYILSEDATVTDQGSV--KGKLVYDLE  107 (171)
T ss_dssp             -HHHHHHHHSCTTCEEEECCSC--CTHHHHHHH
T ss_pred             -hhhhhhccccccccccccccc--cHHHHHHHH
Confidence             011  1245677899999854  234444443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.01  E-value=0.00043  Score=61.94  Aligned_cols=101  Identities=17%  Similarity=0.128  Sum_probs=68.8

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      .+.||++.|+|.|.+|+.++..+...|++|+.++|+....         .....+++++ .+...|+|+.++|....   
T Consensus        39 ~l~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~~---------~~~~~~~l~e-ll~~sDiv~~~~pl~~~---  105 (181)
T d1qp8a1          39 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKEG---------PWRFTNSLEE-ALREARAAVCALPLNKH---  105 (181)
T ss_dssp             CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCCS---------SSCCBSCSHH-HHTTCSEEEECCCCSTT---
T ss_pred             cccCceEEEeccccccccceeeeecccccccccccccccc---------ceeeeechhh-hhhccchhhcccccccc---
Confidence            4789999999999999999999999999999999975421         1111233444 35578999999987522   


Q ss_pred             CCCCCCcc---ccCCCCEEEEEecCCC--hhHHHHHHHH
Q 009464          461 DETPIPKH---ALGHYALVFDAVYTPK--ITRLLREAEE  494 (534)
Q Consensus       461 ~~~~i~~~---~l~~~~~v~Dv~y~p~--~T~ll~~A~~  494 (534)
                      ...-+..+   .++++.+++++.-.+.  +..+++.-++
T Consensus       106 t~~li~~~~l~~mk~~ailIN~~RG~ivd~~aL~~aL~~  144 (181)
T d1qp8a1         106 TRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKE  144 (181)
T ss_dssp             TTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred             cccccccceeeeccccceEEeccccccccchhhhhhccc
Confidence            12234443   3467788888864332  3445444444

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.00  E-value=0.00078  Score=59.84  Aligned_cols=71  Identities=27%  Similarity=0.357  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-cccc-----c----cccc-CCCCceEEEE
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLA-----D----LENF-NPEDGMILAN  450 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~-----~----~~~~-~~~~~divVn  450 (534)
                      .|.+++|+|+|++|..++..+...|+ +|+++++++++. +++++++... ++..     +    +.+. ....+|++|+
T Consensus        28 ~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid  106 (182)
T d1vj0a2          28 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILE  106 (182)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCccchhheecccccccccccccccccccc-cccccccceEEEeccccchHHHHHHHHHhhCCCCceEEee
Confidence            57899999999999999999999999 899999999987 4667776532 1111     1    1110 1235899999


Q ss_pred             cCCC
Q 009464          451 TTSI  454 (534)
Q Consensus       451 ~t~~  454 (534)
                      +++.
T Consensus       107 ~vG~  110 (182)
T d1vj0a2         107 ATGD  110 (182)
T ss_dssp             CSSC
T ss_pred             cCCc
Confidence            9864

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.99  E-value=0.00053  Score=58.83  Aligned_cols=74  Identities=18%  Similarity=0.184  Sum_probs=48.8

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcc------cccccccccCCCCceEEEEcCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA------LSLADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~------~~~~~~~~~~~~~~divVn~t~~g~  456 (534)
                      +++.|+|+|.+|.++++.|...|.  ++++++++.++++..+.++....      .......+ .....|++|.+++...
T Consensus         2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~-~~~~adivvitag~~~   80 (142)
T d1y6ja1           2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYS-DVKDCDVIVVTAGANR   80 (142)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGG-GGTTCSEEEECCCC--
T ss_pred             CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHH-HhCCCceEEEeccccc
Confidence            468899999999999999999986  89999999998877777775210      00111112 3456899999998765


Q ss_pred             CCC
Q 009464          457 QPK  459 (534)
Q Consensus       457 ~~~  459 (534)
                      .|.
T Consensus        81 ~~~   83 (142)
T d1y6ja1          81 KPG   83 (142)
T ss_dssp             ---
T ss_pred             CcC
Confidence            543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.97  E-value=0.00021  Score=66.15  Aligned_cols=36  Identities=33%  Similarity=0.492  Sum_probs=33.3

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      +|++||+|+ +|+|+++|..|+++|++|++++|+.+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            489999999 899999999999999999999998764

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.95  E-value=0.00092  Score=59.44  Aligned_cols=97  Identities=18%  Similarity=0.156  Sum_probs=66.6

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc----ccccc---------------------
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---------------------  436 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~----~~~~~---------------------  436 (534)
                      ....+++|+|+|-+|..++.....+|++|++++.+.++.+++.+.++...    ....+                     
T Consensus        27 V~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          27 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             cCCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            44569999999999999999999999999999999988888766543111    00000                     


Q ss_pred             -ccccCCCCceEEEEcCCCCCCCCCCCCCCCcc---ccCCCCEEEEEec
Q 009464          437 -LENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVY  481 (534)
Q Consensus       437 -~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~---~l~~~~~v~Dv~y  481 (534)
                       +.+ .+..+|+||.++=+.-.+  .+..+.++   .++++.+++|+.-
T Consensus       107 ~l~~-~l~~aDlVI~talipG~~--aP~lit~~mv~~Mk~GSVIVDvai  152 (183)
T d1l7da1         107 AVLK-ELVKTDIAITTALIPGKP--APVLITEEMVTKMKPGSVIIDLAV  152 (183)
T ss_dssp             HHHH-HHTTCSEEEECCCCTTSC--CCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHH-HHHhhhhheeeeecCCcc--cceeehHHHHHhcCCCcEEEEEee
Confidence             111 245689999988554322  12224443   4678899999974

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.93  E-value=0.0013  Score=58.00  Aligned_cols=72  Identities=24%  Similarity=0.317  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-cccccccc--------cCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLEN--------FNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~~--------~~~~~~divVn~t  452 (534)
                      .|.+|+|+|+||.|..++..++..|+ +|++++++++|.+ ++.+++... .+..+.++        .....+|++|+++
T Consensus        28 ~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~-~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~  106 (176)
T d2jhfa2          28 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA-KAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI  106 (176)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHH-HHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecC
Confidence            57899999999999999999999998 9999999999865 556666432 22211111        1235789999998


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus       107 G~~  109 (176)
T d2jhfa2         107 GRL  109 (176)
T ss_dssp             CCH
T ss_pred             Cch
Confidence            753

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.0018  Score=57.02  Aligned_cols=90  Identities=20%  Similarity=0.189  Sum_probs=68.2

Q ss_pred             HHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccc
Q 009464          358 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  436 (534)
Q Consensus       358 ~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~  436 (534)
                      .|++.-|++.           +.++.||+++|+|.+ -.||.++.-|.+.|+.|++++.......+              
T Consensus        24 ~aii~lL~~~-----------~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~--------------   78 (170)
T d1a4ia1          24 KGCLELIKET-----------GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE--------------   78 (170)
T ss_dssp             HHHHHHHHTT-----------TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH--------------
T ss_pred             HHHHHHHHHh-----------CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH--------------
Confidence            4666665542           367899999999996 58999999999999999999875432211              


Q ss_pred             ccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCC
Q 009464          437 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  483 (534)
Q Consensus       437 ~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p  483 (534)
                          ...++|++|.++|..   .    -+..++++++.+++|+-.+.
T Consensus        79 ----~~~~aDivi~a~G~~---~----~i~~~~vk~g~iviDvgi~~  114 (170)
T d1a4ia1          79 ----EVNKGDILVVATGQP---E----MVKGEWIKPGAIVIDCGINY  114 (170)
T ss_dssp             ----HHTTCSEEEECCCCT---T----CBCGGGSCTTCEEEECCCBC
T ss_pred             ----HHhhccchhhccccc---c----ccccccccCCCeEeccCccc
Confidence                123579999888742   1    26678999999999998654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.90  E-value=0.0013  Score=58.25  Aligned_cols=71  Identities=25%  Similarity=0.344  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-cccccccc--------cCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLEN--------FNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~~--------~~~~~~divVn~t  452 (534)
                      .|.+|+|+|+||+|..++..+...|+ +|++++++.+|.+ ++++++... ++..+-..        .....+|++|+++
T Consensus        29 ~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~-~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~  107 (176)
T d1d1ta2          29 PGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFE-KAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVI  107 (176)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECS
T ss_pred             CCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHH-HHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeC
Confidence            57899999999999999999999998 8999999999875 788887643 22222110        0234689999998


Q ss_pred             CC
Q 009464          453 SI  454 (534)
Q Consensus       453 ~~  454 (534)
                      +.
T Consensus       108 g~  109 (176)
T d1d1ta2         108 GH  109 (176)
T ss_dssp             CC
T ss_pred             Cc
Confidence            74

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.88  E-value=0.0016  Score=55.66  Aligned_cols=72  Identities=18%  Similarity=0.193  Sum_probs=52.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcC------c---ccccccccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG------H---ALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~------~---~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      |+.|+|+|.+|.++|+.|+..|.  ++.++++++++++..+.++..      .   ...-.+.+  .....|+||.+++.
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~--~~~~adiVvitag~   79 (142)
T d1ojua1           2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS--LLKGSEIIVVTAGL   79 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG--GGTTCSEEEECCCC
T ss_pred             EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH--HhccccEEEEeccc
Confidence            68899999999999999998886  899999999998776655531      1   11112222  34568999999987


Q ss_pred             CCCCC
Q 009464          455 GMQPK  459 (534)
Q Consensus       455 g~~~~  459 (534)
                      ...|.
T Consensus        80 ~~~~g   84 (142)
T d1ojua1          80 ARKPG   84 (142)
T ss_dssp             CCCSS
T ss_pred             cCCCC
Confidence            65543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.85  E-value=0.00033  Score=60.93  Aligned_cols=106  Identities=20%  Similarity=0.238  Sum_probs=69.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  465 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i  465 (534)
                      |+-++|.|-||.++|..|.+.|.. +++||+.++++++.+.........+.+     ...|++|-+.+...    .....
T Consensus         2 kIg~IGlG~MG~~ma~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~----~v~~~   71 (156)
T d2cvza2           2 KVAFIGLGAMGYPMAGHLARRFPT-LVWNRTFEKALRHQEEFGSEAVPLERV-----AEARVIFTCLPTTR----EVYEV   71 (156)
T ss_dssp             CEEEECCSTTHHHHHHHHHTTSCE-EEECSSTHHHHHHHHHHCCEECCGGGG-----GGCSEEEECCSSHH----HHHHH
T ss_pred             eEEEEeHHHHHHHHHHHHHhCCCE-EEEeCCHHHHHHHHHHcCCcccccccc-----cceeEEEecccchh----hhhhh
Confidence            578999999999999999988764 579999999999988876443222222     23567766554221    00000


Q ss_pred             C---ccccCCCCEEEEEecCCC-h-hHHHHHHHHCCCeEec
Q 009464          466 P---KHALGHYALVFDAVYTPK-I-TRLLREAEESGATIVS  501 (534)
Q Consensus       466 ~---~~~l~~~~~v~Dv~y~p~-~-T~ll~~A~~~G~~ii~  501 (534)
                      .   .....++.+++|+..... . ..+.+.++++|+.+++
T Consensus        72 ~~~l~~~~~~~~~iid~sT~~p~~~~~~~~~~~~~gi~~ld  112 (156)
T d2cvza2          72 AEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLD  112 (156)
T ss_dssp             HHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEE
T ss_pred             hccccccccccccccccccCCHHHHHHHHHHHHHcCCeEEe
Confidence            0   123456788999987644 3 2555667778876553

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.83  E-value=0.0011  Score=58.62  Aligned_cols=72  Identities=21%  Similarity=0.276  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc-ccccc--c----ccccCCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-ALSLA--D----LENFNPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~-~~~~~--~----~~~~~~~~~divVn~t~~  454 (534)
                      .|.+++|+|+|++|..++..+...|+ .|++++++++|.+. +++++.. ..+..  +    +.++..+.+|++|+|++.
T Consensus        28 ~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          28 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLEL-AKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS  106 (174)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC
T ss_pred             CCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHH-HHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCCc
Confidence            47899999999999999999999999 67788888887644 5667643 22221  1    112123468999999874


Q ss_pred             C
Q 009464          455 G  455 (534)
Q Consensus       455 g  455 (534)
                      .
T Consensus       107 ~  107 (174)
T d1f8fa2         107 P  107 (174)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.83  E-value=0.0047  Score=54.31  Aligned_cols=130  Identities=15%  Similarity=0.156  Sum_probs=77.2

Q ss_pred             ccccCCcEEEEEcCc-hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccc--------ccccccCCCCceEEE
Q 009464          379 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL--------ADLENFNPEDGMILA  449 (534)
Q Consensus       379 ~~~l~~k~vlVlGaG-G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~--------~~~~~~~~~~~divV  449 (534)
                      +.+++||+++|+|-+ -.|+.++.-|.++|+.|++++.+..................        +.+.+ ....+|++|
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~-~~~~aDIvI  102 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKK-CSLDSDVVI  102 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHH-HHHHCSEEE
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhh-ccccCCEEE
Confidence            358999999999987 56999999999999999998764221000000000000000        01111 122589999


Q ss_pred             EcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHC-CCeE-ec---cHHHHHHHHHHHHHHhc
Q 009464          450 NTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES-GATI-VS---GLEMFIGQAYEQYERFT  518 (534)
Q Consensus       450 n~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~-G~~i-i~---Gl~ml~~Qa~~qf~lwt  518 (534)
                      .++|..      ...+..++++++.+++|+-.+...-   ...+++ ++.+ ++   -..||...-+..++.|.
T Consensus       103 savG~p------~~~i~~d~ik~GavvIDvGi~~~~~---~~v~~~a~~iTPVPGGVTvamLl~N~v~a~~~~~  167 (171)
T d1edza1         103 TGVPSE------NYKFPTEYIKEGAVCINFACTKNFS---DDVKEKASLYVPMTGKVTIAMLLRNMLRLVRNVE  167 (171)
T ss_dssp             ECCCCT------TCCBCTTTSCTTEEEEECSSSCCBC---GGGGTTEEEEESCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EccCCC------ccccChhhcccCceEeecccccccc---cchhheeeEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            988742      1235678889999999986543321   111221 2211 22   35788888888777764

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.83  E-value=0.0017  Score=55.44  Aligned_cols=72  Identities=18%  Similarity=0.206  Sum_probs=51.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCc------cccc--ccccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH------ALSL--ADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~------~~~~--~~~~~~~~~~~divVn~t~~g  455 (534)
                      |+.|+|+|.+|.++++.|+..|.  ++.++++++++++..+..+...      ...+  .+..+ ....+|++|.+++..
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~-~~~dadvvvitag~~   80 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYA-DTANSDIVIITAGLP   80 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGG-GGTTCSEEEECCSCC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHH-HhcCCeEEEEEEecC
Confidence            58899999999999999999985  8999999998877665554211      0111  11122 356789999999876


Q ss_pred             CCC
Q 009464          456 MQP  458 (534)
Q Consensus       456 ~~~  458 (534)
                      ..|
T Consensus        81 ~~~   83 (142)
T d1guza1          81 RKP   83 (142)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            544

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.81  E-value=0.00056  Score=61.98  Aligned_cols=70  Identities=14%  Similarity=0.032  Sum_probs=47.4

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcC---cccccccccccCCCCceEEEEcCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~---~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ++|||+|+ |.+|++++..|.+.|.  .|+...|+.++.+.+......   +..+.+++.+ ....+|.||++++..
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~~~   79 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP-AFQGIDALVILTSAV   79 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHH-HHTTCSEEEECCCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeecccccccc-ccccceeeEEEEeec
Confidence            68999998 9999999999999997  456677998876554322111   1111222222 345689999988654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.78  E-value=0.0016  Score=57.51  Aligned_cols=72  Identities=19%  Similarity=0.306  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-cccccccc--------cCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLEN--------FNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~~--------~~~~~~divVn~t  452 (534)
                      .|.+|+|+|+||+|..++..+...|+ +|++++++++|. +++++++... .+....++        .....+|++|+|+
T Consensus        28 ~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~-~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~  106 (174)
T d1e3ia2          28 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA  106 (174)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHH-HHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEec
Confidence            57899999999999999999999999 799999998885 7788887542 22211110        0235789999999


Q ss_pred             CCC
Q 009464          453 SIG  455 (534)
Q Consensus       453 ~~g  455 (534)
                      +..
T Consensus       107 G~~  109 (174)
T d1e3ia2         107 GTA  109 (174)
T ss_dssp             CCH
T ss_pred             ccc
Confidence            753

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.76  E-value=0.0014  Score=55.97  Aligned_cols=73  Identities=18%  Similarity=0.176  Sum_probs=52.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc------c--cc-cccccccCCCCceEEEEcCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH------A--LS-LADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~------~--~~-~~~~~~~~~~~~divVn~t~~  454 (534)
                      +++.|+|+|.+|.++|+.|+..+. ++.+++.++++++..+.++...      .  .. ..+.+  .....|++|-+++.
T Consensus         2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~--~~~~advvvitag~   79 (142)
T d1uxja1           2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA--DTANSDVIVVTSGA   79 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG--GGTTCSEEEECCSC
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH--HhcCCCEEEEeeec
Confidence            578999999999999999998887 9999999998887777666321      0  11 12222  24568999999987


Q ss_pred             CCCCC
Q 009464          455 GMQPK  459 (534)
Q Consensus       455 g~~~~  459 (534)
                      ...|.
T Consensus        80 ~~~~~   84 (142)
T d1uxja1          80 PRKPG   84 (142)
T ss_dssp             C----
T ss_pred             cCCcC
Confidence            65544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.75  E-value=0.0017  Score=57.27  Aligned_cols=71  Identities=24%  Similarity=0.296  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-ccccccc----c----cCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLE----N----FNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~----~----~~~~~~divVn~t  452 (534)
                      .|.+|+|+|+||+|..++..+...|+ +|++++++.+|. +++++++... ++..+.+    +    .....+|++|.++
T Consensus        27 ~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl-~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~  105 (174)
T d1p0fa2          27 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA  105 (174)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHH-HHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcC
Confidence            57899999999999999999999998 899999998887 5567777542 2221111    0    0234689999988


Q ss_pred             CC
Q 009464          453 SI  454 (534)
Q Consensus       453 ~~  454 (534)
                      +.
T Consensus       106 g~  107 (174)
T d1p0fa2         106 GR  107 (174)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.75  E-value=0.00036  Score=63.32  Aligned_cols=117  Identities=12%  Similarity=0.148  Sum_probs=73.6

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      +..+.||++.|+|.|.+|+.+|..|...|++|+.+++.......   . .  ....+++.+ .+...|+|+.+.|.... 
T Consensus        38 g~el~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~-~--~~~~~~l~~-~l~~sDii~~~~plt~~-  109 (197)
T d1j4aa1          38 GREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELE---K-K--GYYVDSLDD-LYKQADVISLHVPDVPA-  109 (197)
T ss_dssp             BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---H-T--TCBCSCHHH-HHHHCSEEEECSCCCGG-
T ss_pred             CccccCCeEEEecccccchhHHHhHhhhcccccccCcccccccc---c-c--eeeeccccc-cccccccccccCCcccc-
Confidence            45788999999999999999999999999999999976543211   1 1  112233333 33457999999886532 


Q ss_pred             CCCCCCCCccc---cCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHH
Q 009464          459 KVDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  505 (534)
Q Consensus       459 ~~~~~~i~~~~---l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~m  505 (534)
                        ....+..+.   ++++.+++.+.-.+. ...-+..|.+.|...--+++.
T Consensus       110 --T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~~i~~a~lDV  158 (197)
T d1j4aa1         110 --NVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDV  158 (197)
T ss_dssp             --GTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred             --ccccccHHHHhhhCCccEEEecCchhhhhhHHHHHHHhcccchheeeec
Confidence              122344443   467778887775544 344444554444322234443

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.75  E-value=0.00034  Score=63.27  Aligned_cols=110  Identities=17%  Similarity=0.224  Sum_probs=69.9

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      +..+.||++.|+|.|.+|+.++..|...|++|+.++|......  ....+..  ...++++ .+..+|+|+.++|.... 
T Consensus        44 ~~eL~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~--~~~~~~~--~~~~l~~-ll~~sD~i~~~~plt~~-  117 (193)
T d1mx3a1          44 AARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV--ERALGLQ--RVSTLQD-LLFHSDCVTLHCGLNEH-  117 (193)
T ss_dssp             CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH--HHHHTCE--ECSSHHH-HHHHCSEEEECCCCCTT-
T ss_pred             ceeeeCceEEEeccccccccceeeeeccccceeeccCcccccc--hhhhccc--cccchhh-ccccCCEEEEeeccccc-
Confidence            3568999999999999999999999999999999998654321  1222211  1223333 23357999998886532 


Q ss_pred             CCCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHCC
Q 009464          459 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESG  496 (534)
Q Consensus       459 ~~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G  496 (534)
                        ...-+...   .++++.+++.+.-.+. ++.-+..|.+.|
T Consensus       118 --T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~  157 (193)
T d1mx3a1         118 --NHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEG  157 (193)
T ss_dssp             --CTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred             --chhhhhHHHHhccCCCCeEEecCCceEEcHHHHHHHHHcC
Confidence              12224443   3466778877776554 333444444444

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.75  E-value=0.0014  Score=63.84  Aligned_cols=113  Identities=14%  Similarity=0.095  Sum_probs=72.6

Q ss_pred             CcEEEEEcCchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHHcCcccc-cccccccCCCCceEEEEcCCCCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGHALS-LADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~~~~~-~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      .+++.|+|+|..|+..+.+|.. ... +|.|++|+.++++++++.+...... ..+..+ ....+|+||.||+.. .|  
T Consensus       125 ~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~-a~~~aDiV~taT~s~-~P--  200 (320)
T d1omoa_         125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAE-EASRCDVLVTTTPSR-KP--  200 (320)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHH-HHTSSSEEEECCCCS-SC--
T ss_pred             ccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhh-hhccccEEEEeccCc-cc--
Confidence            4689999999999999999876 455 8999999999999999887532111 111222 235689999999743 22  


Q ss_pred             CCCCCCccccCCCCEEEEEe-cCCChhHHHHHHHHCCCeEeccH
Q 009464          461 DETPIPKHALGHYALVFDAV-YTPKITRLLREAEESGATIVSGL  503 (534)
Q Consensus       461 ~~~~i~~~~l~~~~~v~Dv~-y~p~~T~ll~~A~~~G~~ii~Gl  503 (534)
                         -+..+|++++..+.-+- |.|....+-....++...+++-.
T Consensus       201 ---~~~~~~l~~G~hv~~iGs~~p~~~Eld~~~~~~a~~~vdd~  241 (320)
T d1omoa_         201 ---VVKAEWVEEGTHINAIGADGPGKQELDVEILKKAKIVVDDL  241 (320)
T ss_dssp             ---CBCGGGCCTTCEEEECSCCSTTCCCBCHHHHHTEEEEESCH
T ss_pred             ---ccchhhcCCCCeEeecCCccccccccCHHHhhcCceEecCH
Confidence               25667888876655443 34543322222233333445543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.71  E-value=0.00084  Score=59.19  Aligned_cols=70  Identities=21%  Similarity=0.228  Sum_probs=51.6

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-ccccccccc-c-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLADLEN-F-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-~~~~~~~~~-~-~~~~~divVn~t~  453 (534)
                      .|++++|.|+ |++|.+++..+...|++|+.+.+++++.+. +++++.+ ..+..+... . ....+|++++++|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~-~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PLALGAEEAATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HHHTTCSEEEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccc-ccccccceeeehhhhhhhhhccccccccccccc
Confidence            5789999997 999999999999999999999998887654 4566654 233332211 0 2456999999865

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.66  E-value=0.0036  Score=55.59  Aligned_cols=37  Identities=38%  Similarity=0.512  Sum_probs=33.9

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ...+|+|+|+|+|.+|.++|..|+++|.+|+|+.++.
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhccceEEEeccC
Confidence            3467999999999999999999999999999999864

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.65  E-value=0.0022  Score=56.78  Aligned_cols=70  Identities=21%  Similarity=0.252  Sum_probs=50.7

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc------cc-ccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LE-NFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~------~~-~~~~~~~divVn~t~  453 (534)
                      +|.+++|.|+ ||+|.+++...+..|++|+.+.|+.++.+. ++.++... ++..+      .. ......+|+++|+.+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~-~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY-LKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH-HHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence            5789999999 789999999999999999999999887655 44555432 22111      11 113456999999886

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.65  E-value=0.00073  Score=60.93  Aligned_cols=111  Identities=17%  Similarity=0.113  Sum_probs=70.6

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      +..+.||++.|+|.|.+|+.++..+...|++|..+++..............   ..+++.+ .+...|+|+.++|.... 
T Consensus        42 ~~~l~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~---~~~~l~~-ll~~sD~v~l~~plt~~-  116 (191)
T d1gdha1          42 GEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQAT---FHDSLDS-LLSVSQFFSLNAPSTPE-  116 (191)
T ss_dssp             BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCE---ECSSHHH-HHHHCSEEEECCCCCTT-
T ss_pred             cceecccceEEeecccchHHHHHHHHhhccccccccccccccchhhccccc---ccCCHHH-HHhhCCeEEecCCCCch-
Confidence            456789999999999999999999999999999999865433222222111   1222333 23457999999887532 


Q ss_pred             CCCCCCCCcc---ccCCCCEEEEEecCCC-hhHHHHHHHHCC
Q 009464          459 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESG  496 (534)
Q Consensus       459 ~~~~~~i~~~---~l~~~~~v~Dv~y~p~-~T~ll~~A~~~G  496 (534)
                        ...-+...   .++++.+++.+.-.+. ++.-+-.|.+.|
T Consensus       117 --T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~g  156 (191)
T d1gdha1         117 --TRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAG  156 (191)
T ss_dssp             --TTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred             --HhheecHHHhhCcCCccEEEecCCccchhhHHHHHHHHcC
Confidence              12234443   3466777777765443 344444555544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.64  E-value=0.003  Score=56.80  Aligned_cols=71  Identities=23%  Similarity=0.258  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCccccc---cc----cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSL---AD----LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~---~~----~~~~-~~~~~divVn~t~  453 (534)
                      .|.+|+|+|+|++|..++..++..|+ +|++++++++|. +++++++......   ++    +.+. ....+|+++++++
T Consensus        25 ~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl-~~a~~~Ga~~~~~~~~~~~~~~i~~~t~g~g~D~vid~vG  103 (195)
T d1kola2          25 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVG  103 (195)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhh-HhhhhccccEEEeCCCcCHHHHHHHHhCCCCcEEEEECcc
Confidence            47899999999999999988888898 899999998886 5667776543211   11    1111 2346899999987


Q ss_pred             C
Q 009464          454 I  454 (534)
Q Consensus       454 ~  454 (534)
                      .
T Consensus       104 ~  104 (195)
T d1kola2         104 F  104 (195)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.57  E-value=0.0035  Score=60.91  Aligned_cols=72  Identities=17%  Similarity=0.163  Sum_probs=52.0

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcC----cc-----cccc---cccccCCCCceEEE
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA-----LSLA---DLENFNPEDGMILA  449 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~----~~-----~~~~---~~~~~~~~~~divV  449 (534)
                      +||+|||+|+ |-+|..++..|.++|++|+.+.|+.++...+......    ..     .++.   .+.+ .+..+|.++
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~~~v~   88 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE-VIKGAAGVA   88 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT-TTTTCSEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhh-hcccchhhh
Confidence            5899999999 7799999999999999999999998887766543321    10     1121   2223 456789998


Q ss_pred             EcCCCC
Q 009464          450 NTTSIG  455 (534)
Q Consensus       450 n~t~~g  455 (534)
                      +++...
T Consensus        89 ~~a~~~   94 (342)
T d1y1pa1          89 HIASVV   94 (342)
T ss_dssp             ECCCCC
T ss_pred             hhcccc
Confidence            877643

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.53  E-value=0.0036  Score=54.71  Aligned_cols=71  Identities=23%  Similarity=0.338  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-ccccccc--------ccCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLE--------NFNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~--------~~~~~~~divVn~t  452 (534)
                      .|.+|+|.|+||+|..++..++..|+ +|++++++++|. +++++++... ++..+-.        ......+|++++++
T Consensus        28 ~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~  106 (176)
T d2fzwa2          28 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECI  106 (176)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecC
Confidence            47899999999999999999999998 788888888875 6677887543 2221111        11235689999998


Q ss_pred             CC
Q 009464          453 SI  454 (534)
Q Consensus       453 ~~  454 (534)
                      +.
T Consensus       107 G~  108 (176)
T d2fzwa2         107 GN  108 (176)
T ss_dssp             CC
T ss_pred             CC
Confidence            63

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.50  E-value=0.0015  Score=57.64  Aligned_cols=112  Identities=21%  Similarity=0.245  Sum_probs=67.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccc--cc------ccccccCCCCceEEEEcCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SL------ADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~--~~------~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      ++-|+|.|-||.+++..|.+.|++|+++||++++++++.+.......  ..      +++.. .....+.++-..+....
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   81 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAA-SLKKPRKALILVQAGAA   81 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHH-HBCSSCEEEECCCCSHH
T ss_pred             EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHH-hcccceEEEEeecCcch
Confidence            47899999999999999999999999999999999999887643210  11      11111 11223333333321100


Q ss_pred             CCCCCC-CCCccccCCCCEEEEEecCCCh--hHHHHHHHHCCCeEe
Q 009464          458 PKVDET-PIPKHALGHYALVFDAVYTPKI--TRLLREAEESGATIV  500 (534)
Q Consensus       458 ~~~~~~-~i~~~~l~~~~~v~Dv~y~p~~--T~ll~~A~~~G~~ii  500 (534)
                        .... .-....+.+..+++|..-....  ..+.+..+++|+.++
T Consensus        82 --~~~~~~~~~~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~l  125 (178)
T d1pgja2          82 --TDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFL  125 (178)
T ss_dssp             --HHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEE
T ss_pred             --hhhhhhhhhhhccccceecccCccchhHHHHHHHHHhhcceeEe
Confidence              0000 0001235667788888865332  355566667787544

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=96.46  E-value=0.1  Score=47.96  Aligned_cols=132  Identities=17%  Similarity=0.200  Sum_probs=77.1

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEe-C----------CHHHHHH---
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN-R----------TYDRARE---  422 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~-R----------~~~~a~~---  422 (534)
                      +.|...+++..++.       .+.+++||+++|-|.|.+|..+|+.|.+.|++|+.++ .          +.+...+   
T Consensus        11 g~Gv~~~~~~~~~~-------~~~~l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~~g~i~~~~Gld~~~l~~~~~   83 (242)
T d1v9la1          11 GFGVAVATREMAKK-------LWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKG   83 (242)
T ss_dssp             HHHHHHHHHHHHHH-------HHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred             hHHHHHHHHHHHHH-------cCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecccccccccccccHHHHHHHhh
Confidence            56777777655542       1347899999999999999999999999999876544 2          1222211   


Q ss_pred             --------HHHHHc-CcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHH
Q 009464          423 --------LAETVG-GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE  493 (534)
Q Consensus       423 --------la~~~~-~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~  493 (534)
                              ...... ...  ..+-.++....+||++-|+.-+.-   +....  ..+ ...+++...-+|....--+..+
T Consensus        84 ~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~DIliPcA~~~~I---~~~~a--~~i-~ak~IvegAN~p~t~~a~~~L~  155 (242)
T d1v9la1          84 LTGPALVELFTTKDNAEF--VKNPDAIFKLDVDIFVPAAIENVI---RGDNA--GLV-KARLVVEGANGPTTPEAERILY  155 (242)
T ss_dssp             SCHHHHHHHHHHTSCCCC--CSSTTGGGGCCCSEEEECSCSSCB---CTTTT--TTC-CCSEEECCSSSCBCHHHHHHHH
T ss_pred             cchhhHHHhhhhccCceE--eeCcchhccccccEEeecchhccc---cHHHH--Hhc-ccCEEEecCCCCCChhHHHHHH
Confidence                    111111 111  111111112368999998754321   11111  122 2367888887786334444456


Q ss_pred             HCCCeEeccH
Q 009464          494 ESGATIVSGL  503 (534)
Q Consensus       494 ~~G~~ii~Gl  503 (534)
                      ++|+.+++..
T Consensus       156 ~rgI~~~PD~  165 (242)
T d1v9la1         156 ERGVVVVPDI  165 (242)
T ss_dssp             TTTCEEECHH
T ss_pred             hCCeEEeCch
Confidence            7898777643

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.45  E-value=0.001  Score=59.26  Aligned_cols=68  Identities=21%  Similarity=0.266  Sum_probs=46.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH--HHHHHHHHHcCcc----------cccccccccCCCCceEEEEcCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYD--RARELAETVGGHA----------LSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~--~a~~la~~~~~~~----------~~~~~~~~~~~~~~divVn~t~  453 (534)
                      ++.|+|+|.+|-++|..|++.|.+|++++|..+  ..+.+.+.-....          ...+++.+ ....+|+||.++|
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~ad~Ii~avp   80 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEK-CLENAEVVLLGVS   80 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHH-HHTTCSEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHH-HHhccchhhcccc
Confidence            688999999999999999999999999999544  3444432211000          01123333 3456899999887


Q ss_pred             C
Q 009464          454 I  454 (534)
Q Consensus       454 ~  454 (534)
                      .
T Consensus        81 s   81 (180)
T d1txga2          81 T   81 (180)
T ss_dssp             G
T ss_pred             h
Confidence            4

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.43  E-value=0.00076  Score=61.22  Aligned_cols=118  Identities=17%  Similarity=0.138  Sum_probs=76.0

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~  458 (534)
                      +..+.+|++.|+|.|.+|+.++..|...|++|+.++|...+..       .....+.++.+ .....|+|+.++|.... 
T Consensus        40 ~~~l~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------~~~~~~~~l~~-l~~~~D~v~~~~plt~~-  110 (199)
T d1dxya1          40 GKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD-------HPDFDYVSLED-LFKQSDVIDLHVPGIEQ-  110 (199)
T ss_dssp             CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSC-------CTTCEECCHHH-HHHHCSEEEECCCCCGG-
T ss_pred             cccccceeeeeeecccccccccccccccceeeeccCCccchhh-------hcchhHHHHHH-HHHhcccceeeeccccc-
Confidence            3568899999999999999999999999999999998654311       01112223333 23457999998886522 


Q ss_pred             CCCCCCCCccc---cCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHHH
Q 009464          459 KVDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMFI  507 (534)
Q Consensus       459 ~~~~~~i~~~~---l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml~  507 (534)
                        ....+..+.   ++++.+++.+.-.+. .+.-+..|.+.|-..--+++.+.
T Consensus       111 --T~~li~~~~l~~mk~~a~lIN~aRG~vvde~aL~~aL~~g~i~ga~lDV~~  161 (199)
T d1dxya1         111 --NTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYE  161 (199)
T ss_dssp             --GTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCT
T ss_pred             --ccccccHHHhhccCCceEEEecccHhhhhhHHHHHHHhcCCcceEeccccC
Confidence              122345443   467777777775544 45566666666643334555443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.0034  Score=55.07  Aligned_cols=70  Identities=23%  Similarity=0.312  Sum_probs=51.0

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc--c----cc-cCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD--L----EN-FNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~--~----~~-~~~~~~divVn~t~  453 (534)
                      .|.+++|+|+ |++|.+++..+...|++|+++.+++++. +++++++.+. .+..+  +    .+ .....+|+++++++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccc-ccccccCcccccccccccHHHHhhhhhccCCceEEeeccc
Confidence            5789999997 9999999999999999999988888775 4556676532 22211  1    11 02346899999876

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.41  E-value=0.0034  Score=55.00  Aligned_cols=71  Identities=17%  Similarity=0.264  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc-ccccc-c-c---cc-cCCCCceEEEEcCCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-ALSLA-D-L---EN-FNPEDGMILANTTSI  454 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~-~~~~~-~-~---~~-~~~~~~divVn~t~~  454 (534)
                      .|.+++|+|+|++|..++..+...|+ .|++++++.+|.+ ++++++.. ..+.. + .   .+ .....+|++|++++.
T Consensus        32 ~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          32 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK-LAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHH-HHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             CCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHH-HHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence            47899999999999999999988898 8888999988865 44556543 22211 1 1   11 123468999999874

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.41  E-value=0.0018  Score=57.84  Aligned_cols=39  Identities=26%  Similarity=0.396  Sum_probs=35.4

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  423 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~l  423 (534)
                      |++.|+|+|-||+++|..++..|++|++++++.+..++.
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            679999999999999999999999999999998876554

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.37  E-value=0.0088  Score=47.29  Aligned_cols=42  Identities=24%  Similarity=0.196  Sum_probs=33.1

Q ss_pred             CCcEEEEEcCchhHHHH-HHHHHHCCCeEEEEeCCHH-HHHHHH
Q 009464          383 AGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTYD-RARELA  424 (534)
Q Consensus       383 ~~k~vlVlGaGG~grai-a~~L~~~G~~v~i~~R~~~-~a~~la  424 (534)
                      +.|++.++|-||+|-+. |..|.++|++|+.+++... ..+.+.
T Consensus         7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~   50 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA   50 (96)
T ss_dssp             TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH
T ss_pred             hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH
Confidence            46899999999999655 8889999999999998643 334443

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.36  E-value=0.0025  Score=57.00  Aligned_cols=118  Identities=13%  Similarity=0.012  Sum_probs=74.5

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.++++.|+|.|.+|++++..|...|.+|..++|..... ......+..  ...++.+ .+...|+|+.+.|..-.  
T Consensus        40 ~~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~-~~~~~~~~~--~~~~l~~-~l~~sD~v~~~~plt~~--  113 (188)
T d2naca1          40 YDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPE-SVEKELNLT--WHATRED-MYPVCDVVTLNCPLHPE--  113 (188)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCH-HHHHHHTCE--ECSSHHH-HGGGCSEEEECSCCCTT--
T ss_pred             eeccccceeeccccccchhhhhhhhccCceEEEEeeccccc-ccccccccc--ccCCHHH-HHHhccchhhccccccc--
Confidence            46889999999999999999999999999999999864321 122222211  1223333 34568999999887532  


Q ss_pred             CCCCCCCccc---cCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHH
Q 009464          460 VDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLE  504 (534)
Q Consensus       460 ~~~~~i~~~~---l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~  504 (534)
                       ....+..+.   ++++.+++.+.-.+. +..-+..|.+.|...--+++
T Consensus       114 -T~~li~~~~l~~mk~ga~lIN~aRG~ivd~~aL~~aL~~g~i~ga~lD  161 (188)
T d2naca1         114 -TEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGD  161 (188)
T ss_dssp             -TTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEES
T ss_pred             -chhhhHHHHHHhCCCCCEEEecCchhhhhHHHHHHHHhCCCceeEEEe
Confidence             222355443   456677777765433 44555566666643333444

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.35  E-value=0.0049  Score=52.74  Aligned_cols=72  Identities=18%  Similarity=0.234  Sum_probs=50.3

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCC--eEEEEeCCH--HHHHHHHHHHcC----cc--cc--c---ccccccCCCCceEEE
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTY--DRARELAETVGG----HA--LS--L---ADLENFNPEDGMILA  449 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~--~v~i~~R~~--~~a~~la~~~~~----~~--~~--~---~~~~~~~~~~~divV  449 (534)
                      |+.|+|| |.+|.++++.|+..|.  ++.++++++  ++++.++.++..    ..  ..  +   ++.+  ....+|+||
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~--~l~~aDvVV   79 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR--IIDESDVVI   79 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG--GGTTCSEEE
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH--HhccceEEE
Confidence            5899997 9999999999999995  899999875  455655555431    10  01  1   1222  345789999


Q ss_pred             EcCCCCCCCC
Q 009464          450 NTTSIGMQPK  459 (534)
Q Consensus       450 n~t~~g~~~~  459 (534)
                      -|+|....|.
T Consensus        80 itAG~~~~~g   89 (145)
T d1hyea1          80 ITSGVPRKEG   89 (145)
T ss_dssp             ECCSCCCCTT
T ss_pred             EecccccCCC
Confidence            9998766554

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=96.32  E-value=0.0026  Score=62.25  Aligned_cols=97  Identities=13%  Similarity=0.068  Sum_probs=67.5

Q ss_pred             CcEEEEEcCchhHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHHHHcCc----ccccccccccCCCCceEEEEcCCCCCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~-~G~-~v~i~~R~~~~a~~la~~~~~~----~~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      .+++.|+|+|..|+.-+.++.. .+. +|.+++|+.++++++++.+...    ....+++++ ....+|+|+.+|+... 
T Consensus       128 a~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~e-av~~ADIi~t~Tas~s-  205 (340)
T d1x7da_         128 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAE-AVKGVDIITTVTADKA-  205 (340)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHH-HHTTCSEEEECCCCSS-
T ss_pred             CceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHH-HHhcCCceeeccccCC-
Confidence            4789999999999999988764 577 8999999999999999988542    122334444 4567899998885321 


Q ss_pred             CCCCCCC-CCccccCCCCEEEEEe-cCCChh
Q 009464          458 PKVDETP-IPKHALGHYALVFDAV-YTPKIT  486 (534)
Q Consensus       458 ~~~~~~~-i~~~~l~~~~~v~Dv~-y~p~~T  486 (534)
                          ..| +..+|++++..+.-+- |.|..+
T Consensus       206 ----~~Pv~~~~~l~pG~hI~aiGs~~p~~~  232 (340)
T d1x7da_         206 ----YATIITPDMLEPGMHLNAVGGDCPGKT  232 (340)
T ss_dssp             ----EEEEECGGGCCTTCEEEECSCCBTTBE
T ss_pred             ----CCcccchhhcCCCCEEeecccchhhhh
Confidence                112 5667887776544332 345433

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.29  E-value=0.0024  Score=54.88  Aligned_cols=64  Identities=19%  Similarity=0.172  Sum_probs=45.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHHHcCcccccccccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL-AETVGGHALSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~l-a~~~~~~~~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      ++-|+|.|-||.+++..|.+.|.+|++++|+.++...+ ++..+. ..+.+   + .....|+|+-+++.
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~---e-~~~~~diIi~~v~~   66 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGV-TETSE---E-DVYSCPVVISAVTP   66 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTC-EECCH---H-HHHTSSEEEECSCG
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccc-cccHH---H-HHhhcCeEEEEecC
Confidence            57899999999999999999999999999887655443 333322 11222   2 22357999988763

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.22  E-value=0.008  Score=51.98  Aligned_cols=47  Identities=26%  Similarity=0.396  Sum_probs=40.6

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH  430 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~  430 (534)
                      .|.+++|+|+|++|..++..+...|++|++++++++|.+ ++++++.+
T Consensus        27 ~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~-~a~~~Ga~   73 (166)
T d1llua2          27 PGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLE-LARKLGAS   73 (166)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTTCS
T ss_pred             CCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHH-hhhccCcc
Confidence            478999999999999999999999999999999998864 56677653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=96.21  E-value=0.0018  Score=60.10  Aligned_cols=33  Identities=39%  Similarity=0.498  Sum_probs=31.0

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      +|+|+|||||-+|.++|+.|++.|.+|+|+.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            589999999999999999999999999999865

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.20  E-value=0.006  Score=53.28  Aligned_cols=71  Identities=21%  Similarity=0.298  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-ccccccc----c----cCCCCceEEEEcC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLE----N----FNPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~----~----~~~~~~divVn~t  452 (534)
                      .|.+++|+|+||.|..++..++..|+ +|++++++++|. +++++++.+. ++..+-.    +    .....+|++++++
T Consensus        28 ~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl-~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~  106 (175)
T d1cdoa2          28 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV  106 (175)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred             CCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHH-HHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeec
Confidence            47889999999999999999999998 899999999886 5566777532 2222111    0    0124689999998


Q ss_pred             CC
Q 009464          453 SI  454 (534)
Q Consensus       453 ~~  454 (534)
                      +.
T Consensus       107 G~  108 (175)
T d1cdoa2         107 GN  108 (175)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=96.18  E-value=0.0032  Score=59.54  Aligned_cols=57  Identities=26%  Similarity=0.367  Sum_probs=45.2

Q ss_pred             EEEeccHHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          351 FGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       351 ~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ++.|-|+..++...++.+..          .-..|+|+|||||-+|.++|+.|+++|.+|+|+.++.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~----------~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1           7 CFQENDYEEFLEIARNGLKA----------TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             GGCCTTHHHHHHHHHHCSCC----------CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             hcCCccHHHHHHHHhcCCCC----------CCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34567888888876655432          2245899999999999999999999999999998753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.18  E-value=0.023  Score=44.11  Aligned_cols=34  Identities=26%  Similarity=0.290  Sum_probs=28.8

Q ss_pred             cEEEEEcCchhHH-HHHHHHHHCCCeEEEEeCCHH
Q 009464          385 KLFVVIGAGGAGK-ALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       385 k~vlVlGaGG~gr-aia~~L~~~G~~v~i~~R~~~  418 (534)
                      .++-++|-||+|- ++|..|.++|++|+-+++...
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~   36 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEET   36 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence            4688999999988 457888999999999998763

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0014  Score=60.28  Aligned_cols=74  Identities=18%  Similarity=0.249  Sum_probs=49.2

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHH-HHHcCccccccccccc--CCCCceEEEEcCCCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELA-ETVGGHALSLADLENF--NPEDGMILANTTSIG  455 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~--~v~i~~R~~~~a~~la-~~~~~~~~~~~~~~~~--~~~~~divVn~t~~g  455 (534)
                      .++|+|||+|| |-+|+.++..|.+.|.  +|++++|++.+..... ..+.....++++++++  ....+|+++++++..
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccccccc
Confidence            45789999999 9999999999999986  8999999754321110 1111111233333221  456789999998754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.14  E-value=0.0022  Score=57.44  Aligned_cols=116  Identities=16%  Similarity=0.134  Sum_probs=72.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      ..+.++++.|+|.|.+|+.++..|...|++|+.+++......       .....++++++ .+...|+|+.+.|....  
T Consensus        40 ~~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------~~~~~~~~l~e-ll~~sDii~i~~plt~~--  109 (188)
T d1sc6a1          40 FEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL-------GNATQVQHLSD-LLNMSDVVSLHVPENPS--  109 (188)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCC-------TTCEECSCHHH-HHHHCSEEEECCCSSTT--
T ss_pred             ccccceEEEEeecccchhhhhhhcccccceEeeccccccchh-------hhhhhhhhHHH-HHhhccceeecccCCcc--
Confidence            467899999999999999999999999999999998644210       11112223333 23457999998886522  


Q ss_pred             CCCCCCCccc---cCCCCEEEEEecCCC-hhHHHHHHHHCCCeEeccHHHH
Q 009464          460 VDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  506 (534)
Q Consensus       460 ~~~~~i~~~~---l~~~~~v~Dv~y~p~-~T~ll~~A~~~G~~ii~Gl~ml  506 (534)
                       ...-+..+.   ++++.+++.+.-.+. ++.-+..|.+.|-..--+++.+
T Consensus       110 -T~~li~~~~l~~mk~~a~lIN~aRG~lvde~aL~~aL~~~~~~~a~lDV~  159 (188)
T d1sc6a1         110 -TKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVF  159 (188)
T ss_dssp             -TTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC-
T ss_pred             -hhhhccHHHHhhCCCCCEEEEcCcHHhhhhHHHHHHHHcCCceEEEEecC
Confidence             222355443   467778888776554 4444455555443323333333

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.13  E-value=0.0049  Score=54.78  Aligned_cols=70  Identities=23%  Similarity=0.244  Sum_probs=52.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-cccc------cccccCCCCceEEEEcCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLA------DLENFNPEDGMILANTTS  453 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~~------~~~~~~~~~~divVn~t~  453 (534)
                      +++|||.|| ||+|..+++.+...|+ .|+.+.++.++.+.++++++.+. .+..      .+.+.....+|+++++.+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence            478999997 9999999999989999 56667888899888988887543 1211      111213456999999986

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.10  E-value=0.0096  Score=52.53  Aligned_cols=70  Identities=20%  Similarity=0.210  Sum_probs=50.0

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccccc---ccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLE---NFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~~~---~~~~~~~divVn~t~  453 (534)
                      .+.++||.|+ ||+|.+++.-.+..|++|+.+.|+.++.+.+ ++++.+. ++.++..   .+.....|.+|++.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~lGad~vi~~~~~~~~~~l~~~~~~~vvD~Vg  105 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLGASRVLPRDEFAESRPLEKQVWAGAIDTVG  105 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTEEEEEEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-HhhccccccccccHHHHHHHHhhcCCeeEEEcc
Confidence            3458999999 9999999999999999999999999987544 5666432 2322221   112244688888765

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.10  E-value=0.0056  Score=53.79  Aligned_cols=70  Identities=20%  Similarity=0.237  Sum_probs=50.9

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccc--c----cccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA--D----LENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~--~----~~~~-~~~~~divVn~t~  453 (534)
                      .|+++||.|+ |++|..++..+...|++++++.++.++.+ .+++++.+. .+..  +    +.+. ....+|+++++++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~-~l~~~Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc-ccccccccccccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence            4789999997 99999999999999999999999988864 555666432 2211  1    1111 2346999999886

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.10  E-value=0.0061  Score=53.34  Aligned_cols=70  Identities=21%  Similarity=0.273  Sum_probs=51.0

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-ccccc-----ccccCCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD-----LENFNPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~-----~~~~~~~~~divVn~t~  453 (534)
                      .+..|||.|| ||+|.+++.-....|++|+.+.|+.+|.+.+ +.++.+. .+.++     ......+.+|+++++.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vg   99 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG   99 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-HhhcccceEeccchhchhhhcccCCCceEEEecCc
Confidence            4567999998 9999999998889999999999998887665 4555432 22222     11112356899999875

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.01  E-value=0.004  Score=53.23  Aligned_cols=41  Identities=24%  Similarity=0.225  Sum_probs=35.4

Q ss_pred             cCCcEEEEEc-CchhHHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 009464          382 LAGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARE  422 (534)
Q Consensus       382 l~~k~vlVlG-aGG~graia~~L~~~G~~v~i~~R~~~~a~~  422 (534)
                      ..-|++.|+| .|-||++++..|.+.|++|++++|+.+...+
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~   48 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAE   48 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHH
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccc
Confidence            3457899999 6999999999999999999999998765443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.98  E-value=0.0066  Score=53.59  Aligned_cols=71  Identities=15%  Similarity=0.182  Sum_probs=50.8

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcc-cccccc-----cccCCCCceEEEEcCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADL-----ENFNPEDGMILANTTS  453 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~-~~~~~~-----~~~~~~~~divVn~t~  453 (534)
                      ..|.++||.|+ ||+|.+++.-+...|++|+.+.++.++.+. ++.++.+. .+.++.     .....+.+|+|+++.+
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~-~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vg  107 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY-LRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVG  107 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH-HHHTTCSEEEECC---------CCSCCEEEEEECST
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHH-HHhcccceeeecchhHHHHHHHhhccCcCEEEEcCC
Confidence            35789999998 999999999999999999999999888644 45566432 222111     1112357999999876

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.96  E-value=0.014  Score=49.51  Aligned_cols=72  Identities=22%  Similarity=0.288  Sum_probs=49.1

Q ss_pred             EEEEEc-CchhHHHHHHHHHHCCC--eEEEEeC--CHHHHHHHHHHHcC----c--c-cccccccccCCCCceEEEEcCC
Q 009464          386 LFVVIG-AGGAGKALAYGAKAKGA--RVVIANR--TYDRARELAETVGG----H--A-LSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       386 ~vlVlG-aGG~graia~~L~~~G~--~v~i~~R--~~~~a~~la~~~~~----~--~-~~~~~~~~~~~~~~divVn~t~  453 (534)
                      |+.|+| +|.+|.++|+.|...|.  ++.+++.  +.++++..+.++..    .  . ....+.+  ....+|+||.+++
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~--~~~~aDiVvitaG   79 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE--DTAGSDVVVITAG   79 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG--GGTTCSEEEECCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH--HhhhcCEEEEecc
Confidence            689999 59999999999999987  7999985  45555555544421    1  0 1112222  2456899999998


Q ss_pred             CCCCCC
Q 009464          454 IGMQPK  459 (534)
Q Consensus       454 ~g~~~~  459 (534)
                      ....|.
T Consensus        80 ~~~~~g   85 (142)
T d1o6za1          80 IPRQPG   85 (142)
T ss_dssp             CCCCTT
T ss_pred             cccccC
Confidence            765543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.95  E-value=0.0053  Score=52.40  Aligned_cols=71  Identities=17%  Similarity=0.228  Sum_probs=49.4

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcC-c-c------cccccccccCCCCceEEEEcCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG-H-A------LSLADLENFNPEDGMILANTTSI  454 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~-~-~------~~~~~~~~~~~~~~divVn~t~~  454 (534)
                      |+.|+|| |.+|.++|+.|+..|.  ++.+++.++.+++.+  ++.. . .      ....+..+ ....+|+||-+++.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~--Dl~~~~~~~~~~~~~~~~~~~~-~~~~aDivVitag~   78 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA--DLSHIETRATVKGYLGPEQLPD-CLKGCDVVVIPAGV   78 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH--HHTTSSSSCEEEEEESGGGHHH-HHTTCSEEEECCSC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH--HHhhhhhhcCCCeEEcCCChHH-HhCCCCEEEECCCc
Confidence            7899997 9999999999999886  899999887665543  4431 1 1      11122222 34568999999887


Q ss_pred             CCCCC
Q 009464          455 GMQPK  459 (534)
Q Consensus       455 g~~~~  459 (534)
                      ...|.
T Consensus        79 ~~~~g   83 (144)
T d1mlda1          79 PRKPG   83 (144)
T ss_dssp             CCCTT
T ss_pred             CCCCC
Confidence            65443

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.94  E-value=0.0076  Score=52.34  Aligned_cols=110  Identities=13%  Similarity=0.076  Sum_probs=68.2

Q ss_pred             EEEEEcCchhHHH-HHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCc--ccccccccccCCCCceEEEEcCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKA-LAYGAKAKGA-RVVIANRTYDRARELAETVGGH--ALSLADLENFNPEDGMILANTTSIGMQPKVD  461 (534)
Q Consensus       386 ~vlVlGaGG~gra-ia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~--~~~~~~~~~~~~~~~divVn~t~~g~~~~~~  461 (534)
                      ++.|+|+|++|+. .+..|.+.+. ++++++++.++++++++.++..  ..+++++-+   ..+|+|+-+||...+.   
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~---~~iD~V~I~tp~~~H~---   76 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQ---YGVDAVMIHAATDVHS---   76 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGG---GCCSEEEECSCGGGHH---
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHhcc---cccceecccccccccc---
Confidence            6899999999965 5667776654 8889999999999999998743  223443322   3579999888754321   


Q ss_pred             CCCCCccccCCC-CEEEEE--ecCCC-hhHHHHHHHHCCCeEeccH
Q 009464          462 ETPIPKHALGHY-ALVFDA--VYTPK-ITRLLREAEESGATIVSGL  503 (534)
Q Consensus       462 ~~~i~~~~l~~~-~~v~Dv--~y~p~-~T~ll~~A~~~G~~ii~Gl  503 (534)
                        ++-...++.+ .++++=  ..+.. ...+.+.+++.|..+.-|.
T Consensus        77 --~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~  120 (167)
T d1xeaa1          77 --TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGF  120 (167)
T ss_dssp             --HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             --cccccccccccccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe
Confidence              1112223222 344331  11111 2466667777887665443

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.92  E-value=0.02  Score=49.53  Aligned_cols=71  Identities=18%  Similarity=0.267  Sum_probs=50.6

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc-ccc------cccccc-CCCCceEEEEcC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSL------ADLENF-NPEDGMILANTT  452 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~-~~~------~~~~~~-~~~~~divVn~t  452 (534)
                      .+.+++|+|+ |++|..++..+...|+ +|++++++.+|.+ ++++++.+. .+.      ++..+. ....+|++++++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~-~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~  105 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE-AAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLN  105 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH-HHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHH-HHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhccc
Confidence            4678999996 9999999999999997 9999999988764 445666432 111      111110 234589999998


Q ss_pred             CC
Q 009464          453 SI  454 (534)
Q Consensus       453 ~~  454 (534)
                      +.
T Consensus       106 g~  107 (170)
T d1jvba2         106 NS  107 (170)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=95.92  E-value=0.011  Score=51.73  Aligned_cols=70  Identities=23%  Similarity=0.321  Sum_probs=50.5

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-ccccc--cc----ccc-CCCCceEEEEcCC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLA--DL----ENF-NPEDGMILANTTS  453 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-~~~~~--~~----~~~-~~~~~divVn~t~  453 (534)
                      .|++++|.|+ |++|..++..+...|++|+++.++.++.+. +++++.+ .++..  ++    .+. .-..+|+++++.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~-~~~lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-ALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHH-HHhcCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            4789999988 679999999989999999999999998755 4566653 22221  11    111 2346899999875

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.90  E-value=0.0038  Score=57.06  Aligned_cols=33  Identities=36%  Similarity=0.356  Sum_probs=31.1

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .|+|+|||||-+|.++|+.|+++|.+|+|+.|.
T Consensus         6 ~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcEEEECccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            578999999999999999999999999999984

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0037  Score=60.00  Aligned_cols=70  Identities=19%  Similarity=0.232  Sum_probs=44.4

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH-HHHHHHHHHHcCccccc---ccccccCCCCceEEEEcCCCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSL---ADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~-~~a~~la~~~~~~~~~~---~~~~~~~~~~~divVn~t~~g  455 (534)
                      |+|||+|+ |-+|+.++..|.+.|.+|+.++|.. .+.+.+-........++   +.+.. ...++|+||+++...
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~VihlAa~~   76 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-LYIEVDQIYHLASPA   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-CCCCCSEEEECCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH-HHcCCCEEEECcccC
Confidence            78999999 7899999999999999999887632 11111111111111111   12222 345789999998654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.59  E-value=0.0046  Score=54.47  Aligned_cols=34  Identities=21%  Similarity=0.185  Sum_probs=31.4

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~  417 (534)
                      +|||+|+|||.+|..+|..|+++|+ +|+|+.|..
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            5899999999999999999999999 699999864

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.017  Score=43.59  Aligned_cols=41  Identities=27%  Similarity=0.264  Sum_probs=36.1

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRAREL  423 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~l  423 (534)
                      ++.+++|.|+ ||+|..++..+...|++|+.+.+++++.+-+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            5788999999 9999999999999999999999998886544

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.53  E-value=0.0042  Score=53.50  Aligned_cols=35  Identities=20%  Similarity=0.147  Sum_probs=32.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRA  420 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a  420 (534)
                      |++|+|+|.+|..++..|++.|.+|++++|+.++.
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            68999999999999999999999999999987654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.45  E-value=0.12  Score=48.76  Aligned_cols=158  Identities=16%  Similarity=0.129  Sum_probs=89.2

Q ss_pred             HHHHHHHHHhhhccCCCcC-CCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEe-----------CCHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVS-GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN-----------RTYDRARELA  424 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~-~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~-----------R~~~~a~~la  424 (534)
                      +.|.+.+++..++...... .....+++||+++|-|.|.+|..+|..|.+.|++|+.++           -+.+.+.+..
T Consensus         8 G~GV~~~~~~~l~~~~~~~~~gl~~~L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~~G~i~~~~Gld~~~L~~~~   87 (293)
T d1hwxa1           8 GRGVFHGIENFIENASYMSILGMTPGFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFK   87 (293)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSSSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEECCTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccchhccCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEccchhhccccccchHHHHHHH
Confidence            5677777765543210000 000236889999999999999999999999999876554           3555555544


Q ss_pred             HHHcCcc-cccccc--cccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEec
Q 009464          425 ETVGGHA-LSLADL--ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS  501 (534)
Q Consensus       425 ~~~~~~~-~~~~~~--~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~  501 (534)
                      ...+... ..-...  .++....+||++-|+--+.-   +...  ...+ ...+++.-.-.|......+.-+++|+.+++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~DIliPaA~~~~I---~~~~--a~~l-~ak~I~EgAN~P~t~eA~~~L~~~gI~viP  161 (293)
T d1hwxa1          88 LQHGTILGFPKAKIYEGSILEVDCDILIPAASEKQL---TKSN--APRV-KAKIIAEGANGPTTPQADKIFLERNIMVIP  161 (293)
T ss_dssp             HTTSSSTTCTTSCBCCSCGGGCCCSEEEECSSSSCB---CTTT--GGGC-CCSEEECCSSSCBCHHHHHHHHHTTCEEEC
T ss_pred             HHcCCeecccccccCCcccccCCccEEeeccccccc---cHHH--HHHH-hhCEEeccCCCCCCcchHHHHHHCCCEEeC
Confidence            3332110 000000  11112368999998753321   1111  1223 335788888778644445556788988887


Q ss_pred             cH---------HHHHHHHHHHHHHhcCC
Q 009464          502 GL---------EMFIGQAYEQYERFTGL  520 (534)
Q Consensus       502 Gl---------~ml~~Qa~~qf~lwtg~  520 (534)
                      ..         +-|-|+-..+-..|+-.
T Consensus       162 D~laNAGGV~vSy~Ew~qn~~~~~w~~~  189 (293)
T d1hwxa1         162 DLYLNAGGVTVSYFQILKNLNHVSYGRL  189 (293)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHTSCTTTT
T ss_pred             hhhhcCchHHhHHHHHHhhhhhcccchh
Confidence            43         23344444444556543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.33  E-value=0.015  Score=49.46  Aligned_cols=133  Identities=11%  Similarity=0.080  Sum_probs=80.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc--------ccccccccccCCCCceEEEEcCCCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--------ALSLADLENFNPEDGMILANTTSIGMQ  457 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~--------~~~~~~~~~~~~~~~divVn~t~~g~~  457 (534)
                      +++|+|.|..|+.++..|.+.|.+++++..++++..+..+.....        ..+.+.+.++....++.+|-+++--  
T Consensus         5 HiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d--   82 (153)
T d1id1a_           5 HFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND--   82 (153)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH--
T ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccH--
Confidence            699999999999999999999999999999988776666554221        1122223333567789999877521  


Q ss_pred             CCCCCCCCC----ccccCCCCEEEEEecCCChhHHHHHHHHCCCe-EeccHHHHHHHHHHHHHHhcCCCCCHHHHHHH
Q 009464          458 PKVDETPIP----KHALGHYALVFDAVYTPKITRLLREAEESGAT-IVSGLEMFIGQAYEQYERFTGLPAPKELFQKI  530 (534)
Q Consensus       458 ~~~~~~~i~----~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~-ii~Gl~ml~~Qa~~qf~lwtg~~~p~~~~~~~  530 (534)
                          ...+.    ...+.+..-++-.+.+|.....+   ++.|+. +++- ..+..+.+.+  .-.|...+.+.+.+.
T Consensus        83 ----~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l---~~~Gad~vi~p-~~~~~~~l~~--~l~~~~v~~~~~~~~  150 (153)
T d1id1a_          83 ----ADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKI---KMVHPDIILSP-QLFGSEILAR--VLNGEEINNDMLVSM  150 (153)
T ss_dssp             ----HHHHHHHHHHHHHTSSSCEEEECSSGGGHHHH---HTTCCSEEECH-HHHHHHHHHH--HHTTCCCCHHHHHHT
T ss_pred             ----HHHHHHHHHHHHhCCCCceEEEEcCHHHHHHH---HHCCCCEEECH-HHHHHHHHHH--HhCcCCCCHHHHHHH
Confidence                11110    11223343455555666655544   566885 4553 4444333332  234666666665543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.28  E-value=0.0064  Score=51.93  Aligned_cols=37  Identities=22%  Similarity=0.421  Sum_probs=33.8

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      ..++||++||+|+|.+|..-+..|.+.|++|+|++..
T Consensus         9 ~~l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5688999999999999999999999999999999643

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=95.16  E-value=0.072  Score=49.48  Aligned_cols=129  Identities=13%  Similarity=0.136  Sum_probs=76.6

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEe-C----------CHHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN-R----------TYDRARELAE  425 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~-R----------~~~~a~~la~  425 (534)
                      +.|.+.+++..++..       +.++++|+++|-|.|.+|+.+++.|.+.|++|+.++ .          +.++..+...
T Consensus        16 G~Gv~~~~~~~~~~~-------~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD~~G~i~~~~Gld~~~l~~~~~   88 (255)
T d1bgva1          16 GYGSVYYVEAVMKHE-------NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYML   88 (255)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhC-------CCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCceEecCCCCCHHHHHHHHH
Confidence            577777777655532       357899999999999999999999999999876443 2          2333333222


Q ss_pred             HH---------------cCcccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCcc---ccC--CCCEEEEEecCCCh
Q 009464          426 TV---------------GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALG--HYALVFDAVYTPKI  485 (534)
Q Consensus       426 ~~---------------~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~---~l~--~~~~v~Dv~y~p~~  485 (534)
                      +.               +.+..+-+++   -...+||++-|+--+        .+..+   .+.  ...+|+...-.|..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~DiliPcA~~~--------~I~~~~a~~l~a~~ck~I~EgAN~p~t  157 (255)
T d1bgva1          89 EMRASGRNKVQDYADKFGVQFFPGEKP---WGQKVDIIMPCATQN--------DVDLEQAKKIVANNVKYYIEVANMPTT  157 (255)
T ss_dssp             HHHHHCCCCTHHHHHHHTCEEEETCCG---GGSCCSEEECCSCTT--------CBCHHHHHHHHHTTCCEEECCSSSCBC
T ss_pred             HHhhhcCcchhhhhhhcCceeechhhc---ccccccEEeeccccc--------cccHHHHHhhhhcCceEEecCCCCCcc
Confidence            21               1111111111   123689999776422        13322   222  24688888877754


Q ss_pred             hHHHHH-HHHCCCeEeccH
Q 009464          486 TRLLRE-AEESGATIVSGL  503 (534)
Q Consensus       486 T~ll~~-A~~~G~~ii~Gl  503 (534)
                      .+-.+. .+++|..+++..
T Consensus       158 ~ea~~~ll~~~gI~vvPD~  176 (255)
T d1bgva1         158 NEALRFLMQQPNMVVAPSK  176 (255)
T ss_dssp             HHHHHHHHHCTTCEEECHH
T ss_pred             hHHHHHHHHhcCCEEehHh
Confidence            333343 455788776643

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.09  E-value=0.0051  Score=59.58  Aligned_cols=38  Identities=29%  Similarity=0.185  Sum_probs=34.3

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      +++|+|||+|+ |-+|..++..|.+.|++|++++|+..+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~   44 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPT   44 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSS
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence            57899999999 889999999999999999999986543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.08  E-value=0.035  Score=47.60  Aligned_cols=47  Identities=30%  Similarity=0.455  Sum_probs=40.3

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH  430 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~  430 (534)
                      .|.+++|.|+|++|..++..+...|++|+++.++++|.+ .+++++.+
T Consensus        27 ~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~-~~k~~Ga~   73 (168)
T d1rjwa2          27 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAKELGAD   73 (168)
T ss_dssp             TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHTTCS
T ss_pred             CCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhh-hhhhcCcc
Confidence            478999999999999999999999999999999999875 45667653

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.03  E-value=0.021  Score=50.21  Aligned_cols=70  Identities=13%  Similarity=0.150  Sum_probs=50.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHC-CCeEE-EEeCCHHHHHHHHHHHcCcc--ccccccccc-CCCCceEEEEcCCCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAK-GARVV-IANRTYDRARELAETVGGHA--LSLADLENF-NPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~-G~~v~-i~~R~~~~a~~la~~~~~~~--~~~~~~~~~-~~~~~divVn~t~~g  455 (534)
                      ++.|+|+|.+|+..+..+... +++|+ +++++.+++++++++++...  ..+++++++ .....|+|+-+||..
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~tp~~   77 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS   77 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecccch
Confidence            688999999999999999876 45655 78999999999999876321  112333221 124689999988754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.95  E-value=0.0097  Score=54.66  Aligned_cols=34  Identities=21%  Similarity=0.240  Sum_probs=31.4

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .++|+|+|||-+|.++|..|++.|.+|+|+.|+.
T Consensus         4 ~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4789999999999999999999999999999853

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.90  E-value=0.021  Score=53.41  Aligned_cols=34  Identities=18%  Similarity=0.273  Sum_probs=30.7

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .++|||+|| |-+|+.++.+|.+.|.+|+++.|+.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            357999998 9999999999999999999999864

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.86  E-value=0.016  Score=50.60  Aligned_cols=69  Identities=23%  Similarity=0.263  Sum_probs=50.5

Q ss_pred             ccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCC
Q 009464          381 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       381 ~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~  453 (534)
                      .+++|++.|+|-|.-|+|-|..|..-|++|+|-.|...+..+.|+.-+-+..++++..    ..+|+|..-+|
T Consensus        13 ~ik~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~~~eA~----~~aDiim~L~P   81 (182)
T d1np3a2          13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAV----AAADVVMILTP   81 (182)
T ss_dssp             HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHH----HTCSEEEECSC
T ss_pred             HHCCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccccHHHHh----hhcCeeeeecc
Confidence            4578999999999999999999999999999999987766666665444433333322    23566555554

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=94.82  E-value=0.015  Score=52.94  Aligned_cols=72  Identities=10%  Similarity=0.140  Sum_probs=49.8

Q ss_pred             cEEEEEcCchhHHH-HHHHHHHC-CCeEE-EEeCCHHHHHHHHHHHcCcc---ccccccccc-CCCCceEEEEcCCCCC
Q 009464          385 KLFVVIGAGGAGKA-LAYGAKAK-GARVV-IANRTYDRARELAETVGGHA---LSLADLENF-NPEDGMILANTTSIGM  456 (534)
Q Consensus       385 k~vlVlGaGG~gra-ia~~L~~~-G~~v~-i~~R~~~~a~~la~~~~~~~---~~~~~~~~~-~~~~~divVn~t~~g~  456 (534)
                      -++.|+|+|.+|+. .+..+... +++|+ |++|+.+++++++++++...   ..++++.++ .....|+|+-+|+...
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~tp~~~  112 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL  112 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeeccchhh
Confidence            47999999999975 45555554 55654 89999999999999986432   122333331 1246899998887543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=94.75  E-value=0.0091  Score=58.29  Aligned_cols=32  Identities=31%  Similarity=0.294  Sum_probs=29.5

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~  416 (534)
                      |+|||+|| |-+|+.++..|.+.|.+|+.++|.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            78999998 889999999999999999999984

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.69  E-value=0.02  Score=47.09  Aligned_cols=35  Identities=26%  Similarity=0.242  Sum_probs=32.0

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ++|+++|+|+|-+|..+|..|++.|.+|+++.|..
T Consensus        29 ~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECChHHHHHHHHHhhccceEEEEEEecC
Confidence            46899999999999999999999999999998753

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=94.62  E-value=0.015  Score=50.23  Aligned_cols=117  Identities=15%  Similarity=0.025  Sum_probs=72.2

Q ss_pred             EEEEEcCchhHHH-HHHHHHHC-CCe-EEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          386 LFVVIGAGGAGKA-LAYGAKAK-GAR-VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       386 ~vlVlGaGG~gra-ia~~L~~~-G~~-v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      ++.|+|+|.+|+- .+..+... +++ +.|++++.++++++++.++....  ++.++ .....|+|+-+||..++.    
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~--~~~~~-l~~~~D~V~I~tp~~~h~----   75 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYA--DSLSS-LAASCDAVFVHSSTASHF----   75 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBC--SSHHH-HHTTCSEEEECSCTTHHH----
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccccc--ccchh-hhhhcccccccccchhcc----
Confidence            6889999999975 56667665 555 56889999999999999875432  22222 123579999998754321    


Q ss_pred             CCCCccccCCC-CEEEE--EecCCC-hhHHHHHHHHCCCeEeccHHHHHHHH
Q 009464          463 TPIPKHALGHY-ALVFD--AVYTPK-ITRLLREAEESGATIVSGLEMFIGQA  510 (534)
Q Consensus       463 ~~i~~~~l~~~-~~v~D--v~y~p~-~T~ll~~A~~~G~~ii~Gl~ml~~Qa  510 (534)
                       ++....++.+ .+++|  +..++. ...+++.|++.|..+.-|.....+++
T Consensus        76 -~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~~~  126 (164)
T d1tlta1          76 -DVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFFVG  126 (164)
T ss_dssp             -HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGHHH
T ss_pred             -ccccccccccceeeccccccCCHHHHHHHHHHHHHcCCcEEEEeccccCHH
Confidence             1222233333 34444  222222 34677778888877766655444443

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.58  E-value=0.015  Score=55.89  Aligned_cols=34  Identities=26%  Similarity=0.423  Sum_probs=31.4

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .|+++|+|||-+|.++|+.|++.|.+|+|+.++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            5899999999999999999999999999998763

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.56  E-value=0.02  Score=47.01  Aligned_cols=34  Identities=24%  Similarity=0.389  Sum_probs=31.7

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +|+++|+|+|-+|-.+|..|++.|.+|+++.|..
T Consensus        30 ~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECcchhHHHHHHHhhcccceEEEEeecc
Confidence            5899999999999999999999999999998764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.56  E-value=0.021  Score=46.37  Aligned_cols=34  Identities=32%  Similarity=0.346  Sum_probs=31.5

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .|+++|+|+|-+|-.+|..|+++|.+|+++.|..
T Consensus        22 p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECCCccceeeeeeecccccEEEEEEecc
Confidence            4799999999999999999999999999998764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=94.49  E-value=0.013  Score=56.69  Aligned_cols=38  Identities=29%  Similarity=0.315  Sum_probs=33.8

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHH
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRA  420 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a  420 (534)
                      +.|+|+|+|| |.+|++++..|.+.|++|+++.|+.++.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchh
Confidence            3589999999 9999999999999999999999976543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.47  E-value=0.018  Score=53.62  Aligned_cols=33  Identities=24%  Similarity=0.327  Sum_probs=30.3

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .++|+|||||-+|.++|+.|+++|.+|+|+.++
T Consensus         5 ~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            467999999999999999999999999998754

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=94.45  E-value=0.014  Score=54.17  Aligned_cols=34  Identities=24%  Similarity=0.306  Sum_probs=31.3

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .|+|||+|| |-+|+.++.+|.+.|.+|+++.|+.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            578999999 9999999999999999999999864

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.40  E-value=0.021  Score=46.83  Aligned_cols=34  Identities=21%  Similarity=0.259  Sum_probs=31.5

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .|+++|+|+|-+|-.+|..|+++|++|+++.|..
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCcceeEEEecc
Confidence            4799999999999999999999999999998754

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.39  E-value=0.031  Score=48.75  Aligned_cols=71  Identities=20%  Similarity=0.180  Sum_probs=45.8

Q ss_pred             cEEEEEcCchhHH--HHHHHHHHC----CCeEEEEeCCHHHHHHHHHHHcC-------c--ccccccccccCCCCceEEE
Q 009464          385 KLFVVIGAGGAGK--ALAYGAKAK----GARVVIANRTYDRARELAETVGG-------H--ALSLADLENFNPEDGMILA  449 (534)
Q Consensus       385 k~vlVlGaGG~gr--aia~~L~~~----G~~v~i~~R~~~~a~~la~~~~~-------~--~~~~~~~~~~~~~~~divV  449 (534)
                      -|+.|+|||.+|.  ++...|+..    +.+|+++++++++++..+..+..       .  .....+..+ .+..+|+||
T Consensus         3 mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~e-aL~dad~Vv   81 (171)
T d1obba1           3 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDD-VIIDADFVI   81 (171)
T ss_dssp             CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHH-HHTTCSEEE
T ss_pred             cEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhh-cccCCCeEe
Confidence            4789999996654  444445532    34899999999998765543321       1  111223334 456789999


Q ss_pred             EcCCCCC
Q 009464          450 NTTSIGM  456 (534)
Q Consensus       450 n~t~~g~  456 (534)
                      ++..+|.
T Consensus        82 ~~~~~g~   88 (171)
T d1obba1          82 NTAMVGG   88 (171)
T ss_dssp             ECCCTTH
T ss_pred             eeccccc
Confidence            9988764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.39  E-value=0.022  Score=46.24  Aligned_cols=34  Identities=24%  Similarity=0.196  Sum_probs=31.4

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .|+++|+|+|-+|-.+|..|++.|.+|+++.|..
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence            3789999999999999999999999999999853

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.36  E-value=0.96  Score=40.89  Aligned_cols=132  Identities=15%  Similarity=0.060  Sum_probs=76.5

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHH-CCCeEEEEe-----------CCHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGARVVIAN-----------RTYDRARELA  424 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~-~G~~v~i~~-----------R~~~~a~~la  424 (534)
                      +.|...+++..+...       +.++++++++|=|.|.+|+.++..|.+ .|++|+.++           -+.+...+..
T Consensus        11 g~Gv~~~~~~~~~~~-------~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~   83 (234)
T d1b26a1          11 GRGVKVCAGLAMDVL-------GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYK   83 (234)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHc-------CCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHH
Confidence            567777766544431       357899999999999999999999974 699776544           2344444444


Q ss_pred             HHHcCcc--cccc--cccccCCCCceEEEEcCCCCCCCCCCCCCCCccccC--CCCEEEEEecCCChhHHHHHHHHCCCe
Q 009464          425 ETVGGHA--LSLA--DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG--HYALVFDAVYTPKITRLLREAEESGAT  498 (534)
Q Consensus       425 ~~~~~~~--~~~~--~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~--~~~~v~Dv~y~p~~T~ll~~A~~~G~~  498 (534)
                      +..+...  ...+  +..++....+||++-|+--+.        +..+..+  ...+++...-+|.....-+.-.++|+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~DI~~PcA~~~~--------I~~~~a~~l~~~~I~e~AN~p~t~~a~~~L~~rgI~  155 (234)
T d1b26a1          84 KEHGTVVTYPKGERITNEELLELDVDILVPAALEGA--------IHAGNAERIKAKAVVEGANGPTTPEADEILSRRGIL  155 (234)
T ss_dssp             HHSSCSTTCSSCEEECHHHHHTSCCSEEEECSCTTC--------BCHHHHTTCCCSEEECCSSSCBCHHHHHHHHHTTCE
T ss_pred             Hhhcceeccccceeeccccccccccceeecchhccc--------ccHHHHHHhhhceEeecCCCCCCHHHHHHHHHCCeE
Confidence            4332111  0000  001111236899998864331        2222211  235777777667543444445778987


Q ss_pred             EeccH
Q 009464          499 IVSGL  503 (534)
Q Consensus       499 ii~Gl  503 (534)
                      +++..
T Consensus       156 ~~PD~  160 (234)
T d1b26a1         156 VVPDI  160 (234)
T ss_dssp             EECHH
T ss_pred             EechH
Confidence            77643

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.35  E-value=0.02  Score=46.68  Aligned_cols=33  Identities=24%  Similarity=0.207  Sum_probs=31.0

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .|+++|+|+|-+|-.+|..|++.|.+|+++.|.
T Consensus        22 p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~   54 (117)
T d1onfa2          22 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARG   54 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             CCEEEEECCchHHHHHHHHHHhccccceeeehh
Confidence            479999999999999999999999999999984

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.35  E-value=1.3  Score=40.22  Aligned_cols=131  Identities=18%  Similarity=0.162  Sum_probs=77.4

Q ss_pred             HHHHHHHHHhhhccCCCcCCCcccccCCcEEEEEcCchhHHHHHHHHHH-CCCeEEE-EeC----------CHHHHHHHH
Q 009464          357 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGARVVI-ANR----------TYDRARELA  424 (534)
Q Consensus       357 ~~G~~~~l~~~l~~~~~~~~~~~~~l~~k~vlVlGaGG~graia~~L~~-~G~~v~i-~~R----------~~~~a~~la  424 (534)
                      +.|...+++..++.. +     ..+++||+++|-|.|.+|..+++.|.+ .|++|+- .+.          +.+...+..
T Consensus        11 g~Gv~~~~~~~~~~~-g-----~~~l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vsD~~g~i~~~~G~d~~~l~~~~   84 (239)
T d1gtma1          11 ARGASYTIREAAKVL-G-----WDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWK   84 (239)
T ss_dssp             HHHHHHHHHHHHHHT-T-----CSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHh-C-----CCCcCCCEEEEECCCHHHHHHHHHHHHhcCcceeeccccccceecCCcCCHHHHHHHH
Confidence            567777776655431 1     135899999999999999999999976 5886554 332          334444443


Q ss_pred             HHHcCc-------ccccccccccCCCCceEEEEcCCCCCCCCCCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCC
Q 009464          425 ETVGGH-------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA  497 (534)
Q Consensus       425 ~~~~~~-------~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~  497 (534)
                      ...+.-       ..+.+++   ...++||++-|+--+.-   +....  ..+ ...++....-+|....-.+...++|+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~i---~~~~~DIl~PcA~~~~I---~~~~a--~~i-~ak~I~e~AN~p~t~ea~~~L~~rgI  155 (239)
T d1gtma1          85 NEHGSVKDFPGATNITNEEL---LELEVDVLAPAAIEEVI---TKKNA--DNI-KAKIVAEVANGPVTPEADEILFEKGI  155 (239)
T ss_dssp             HHHSSSTTCTTSEEECHHHH---HHSCCSEEEECSCSCCB---CTTGG--GGC-CCSEEECCSSSCBCHHHHHHHHHTTC
T ss_pred             HhccccccCCCCeeeccccc---ccccccEEeeccccccc---cHHHH--Hhc-cccEEEecCCCCCCHHHHHHHHHCCC
Confidence            333210       1111111   12368999998854321   11111  223 33678888877764444455678898


Q ss_pred             eEecc
Q 009464          498 TIVSG  502 (534)
Q Consensus       498 ~ii~G  502 (534)
                      .+++.
T Consensus       156 ~~iPD  160 (239)
T d1gtma1         156 LQIPD  160 (239)
T ss_dssp             EEECH
T ss_pred             EEecc
Confidence            87763

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.34  E-value=0.017  Score=50.36  Aligned_cols=73  Identities=12%  Similarity=0.090  Sum_probs=45.2

Q ss_pred             CcEEEEEcCchhHH--HHHHHHHHC---C-CeEEEEeCCHHHHHHHHHHHcC-------c--ccccccccccCCCCceEE
Q 009464          384 GKLFVVIGAGGAGK--ALAYGAKAK---G-ARVVIANRTYDRARELAETVGG-------H--ALSLADLENFNPEDGMIL  448 (534)
Q Consensus       384 ~k~vlVlGaGG~gr--aia~~L~~~---G-~~v~i~~R~~~~a~~la~~~~~-------~--~~~~~~~~~~~~~~~div  448 (534)
                      .-++.|+|||..+-  .+...|...   . .+|++++.++++++..+..+..       .  .....+..+ .+..+|+|
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~e-al~~AD~V   81 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEE-AFTDVDFV   81 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHH-HHSSCSEE
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhh-ccCCCCEE
Confidence            35799999985543  333334322   1 2899999999998865544421       1  111223333 35678999


Q ss_pred             EEcCCCCCC
Q 009464          449 ANTTSIGMQ  457 (534)
Q Consensus       449 Vn~t~~g~~  457 (534)
                      |++++++..
T Consensus        82 vitag~~~~   90 (167)
T d1u8xx1          82 MAHIRVGKY   90 (167)
T ss_dssp             EECCCTTHH
T ss_pred             EECCCcCCC
Confidence            999987643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.20  E-value=0.019  Score=52.39  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=32.9

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      -.+|+++|+|+|.+|.++|..|++.|.+|+|+.++.
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhccceeeEeecc
Confidence            367999999999999999999999999999998754

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.012  Score=54.44  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=31.4

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANR  415 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R  415 (534)
                      +++++|+|+|+||+|-.++..|+..|+ ++++++.
T Consensus        28 L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          28 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             HhCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence            567899999999999999999999999 9999874

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.09  E-value=0.065  Score=52.33  Aligned_cols=31  Identities=35%  Similarity=0.421  Sum_probs=28.4

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIAN  414 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~  414 (534)
                      |++|||+|+ |-+|..++..|.+.|++|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            589999999 8899999999999999999986

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.09  E-value=0.027  Score=46.33  Aligned_cols=33  Identities=24%  Similarity=0.209  Sum_probs=31.2

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .|+++|+|+|-+|-.+|..|+++|.+|+++.|.
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~   54 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRH   54 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeec
Confidence            379999999999999999999999999999985

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.08  E-value=0.032  Score=45.50  Aligned_cols=34  Identities=29%  Similarity=0.213  Sum_probs=31.2

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .++++|+|+|-+|-.+|..|++.|++|+++.|..
T Consensus        22 p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECCChHHHHHHHHHHHcCCceEEEEeec
Confidence            4789999999999999999999999999998753

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.05  E-value=0.024  Score=46.47  Aligned_cols=34  Identities=26%  Similarity=0.283  Sum_probs=31.5

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +++++|+|+|-+|-.+|..|++.|++|+++.|..
T Consensus        32 ~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence            4789999999999999999999999999999864

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.03  E-value=0.012  Score=52.58  Aligned_cols=69  Identities=16%  Similarity=0.043  Sum_probs=43.3

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~--~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      .|++||+|| |-+|+.++..|.+.|.  +|+...|+.....   ..+.....++.++.+......|.+|++++..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---PRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---TTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---ccccccccchhhhhhccccchheeeeeeeee
Confidence            389999999 9999999999999997  6777777532100   0011111222222221334579999987654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.92  E-value=0.023  Score=48.57  Aligned_cols=34  Identities=26%  Similarity=0.372  Sum_probs=30.8

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~  417 (534)
                      ||+++|+|+|-+|..+|..|.++|.  +|+++.++.
T Consensus         2 gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            7999999999999999999999885  899988764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.86  E-value=0.022  Score=50.77  Aligned_cols=31  Identities=29%  Similarity=0.405  Sum_probs=28.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      +|+|||||-+|.++|+.|+++|. +|+|+.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECC
Confidence            58999999999999999999997 79999875

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.85  E-value=0.043  Score=46.52  Aligned_cols=71  Identities=18%  Similarity=0.203  Sum_probs=46.7

Q ss_pred             EEEEEcC-chhHHHHHHHHHH-CCC--eEEEEeCCHHHHHHHHHHHcCcc--c------ccccccccCCCCceEEEEcCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKA-KGA--RVVIANRTYDRARELAETVGGHA--L------SLADLENFNPEDGMILANTTS  453 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~-~G~--~v~i~~R~~~~a~~la~~~~~~~--~------~~~~~~~~~~~~~divVn~t~  453 (534)
                      ++.|+|+ |.+|.++++.|+. .+.  ++.+++..+ +++..+.++..-.  .      ...+.+  .....|+||.+++
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~--~~~~aDvvvitaG   78 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP--ALEGADVVLISAG   78 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHH--HHTTCSEEEECCS
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcc--ccCCCCEEEECCC
Confidence            6889995 9999999999864 453  899999864 5555555553210  0      011111  2346899999998


Q ss_pred             CCCCCC
Q 009464          454 IGMQPK  459 (534)
Q Consensus       454 ~g~~~~  459 (534)
                      ....|.
T Consensus        79 ~~~k~g   84 (145)
T d2cmda1          79 VRRKPG   84 (145)
T ss_dssp             CCCCTT
T ss_pred             ccCCCC
Confidence            765544

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.84  E-value=0.069  Score=46.61  Aligned_cols=68  Identities=22%  Similarity=0.203  Sum_probs=49.4

Q ss_pred             EEEEEcCchhHHH-HHHHHHHCC--CeEE-EEeCCHHHHHHHHHHHcCcc--cccccccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIGAGGAGKA-LAYGAKAKG--ARVV-IANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGaGG~gra-ia~~L~~~G--~~v~-i~~R~~~~a~~la~~~~~~~--~~~~~~~~~~~~~~divVn~t~~g  455 (534)
                      ++.|+|+|.+|+. .+.++.+.+  .+|+ |++|+.++++.+++.++...  .+++++-+  ....|+|+-+||..
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~--~~~id~v~I~tp~~   78 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLE--SGLVDAVDLTLPVE   78 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHH--SSCCSEEEECCCGG
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeecccc--ccccceeecccccc
Confidence            6899999999987 477777654  3554 88999999999999987532  23443322  24589999888754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.68  E-value=0.025  Score=52.25  Aligned_cols=32  Identities=28%  Similarity=0.314  Sum_probs=29.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      -|+|||||-+|.++|+.|++.|.+|+|+.|..
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            48999999999999999999999999999853

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.65  E-value=0.029  Score=45.38  Aligned_cols=33  Identities=27%  Similarity=0.423  Sum_probs=30.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .++++|+|+|-+|-.+|..|++.|++|+++.|.
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~   53 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEAR   53 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhcccceEEEeee
Confidence            479999999999999999999999999999875

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.64  E-value=0.027  Score=49.89  Aligned_cols=31  Identities=19%  Similarity=0.263  Sum_probs=29.3

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      |+|||||-.|.++|+.|++.|.+|.|+.++.
T Consensus         8 viViGaG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            8999999999999999999999999999863

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.63  E-value=0.035  Score=46.18  Aligned_cols=35  Identities=29%  Similarity=0.320  Sum_probs=32.0

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .+|+++|+|+|-+|-.+|..|++.|.+|+++.|..
T Consensus        34 ~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECCchHHHHHHHHHHhhCcceeeeeecc
Confidence            36899999999999999999999999999998753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.61  E-value=0.023  Score=52.14  Aligned_cols=31  Identities=26%  Similarity=0.442  Sum_probs=29.0

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      +|+|||||-+|.++|+.|++.|++|+|+.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence            4899999999999999999999999999875

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.55  E-value=0.033  Score=52.72  Aligned_cols=33  Identities=30%  Similarity=0.182  Sum_probs=30.1

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      |+|||+|+ |-+|+.++..|.+.|++|+.++|..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~   34 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR   34 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence            68999999 8899999999999999999988753

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.54  E-value=0.045  Score=46.74  Aligned_cols=74  Identities=14%  Similarity=0.069  Sum_probs=49.8

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCC---------eEEEEeCCHHHHHHHHHHHcCcc-------cccccccccCCCCceE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGA---------RVVIANRTYDRARELAETVGGHA-------LSLADLENFNPEDGMI  447 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~---------~v~i~~R~~~~a~~la~~~~~~~-------~~~~~~~~~~~~~~di  447 (534)
                      -+|.|+|| |.+|..+++.|+..+.         +++..+++.++++.++..+....       ....+..+ ....+|+
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~adv   83 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV-AFKDADY   83 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH-HTTTCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh-hcccccE
Confidence            37999998 9999999999997653         23445677788877776654211       01111222 4567899


Q ss_pred             EEEcCCCCCCCC
Q 009464          448 LANTTSIGMQPK  459 (534)
Q Consensus       448 vVn~t~~g~~~~  459 (534)
                      +|.+++....|.
T Consensus        84 ViitaG~~~~pg   95 (154)
T d1y7ta1          84 ALLVGAAPRKAG   95 (154)
T ss_dssp             EEECCCCCCCTT
T ss_pred             EEeecCcCCCCC
Confidence            999998765554

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.52  E-value=0.033  Score=45.63  Aligned_cols=33  Identities=21%  Similarity=0.089  Sum_probs=30.7

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .++++|+|+|-+|-.+|..|++.|++|+|+.|+
T Consensus        20 P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence            368999999999999999999999999999876

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.51  E-value=0.061  Score=51.63  Aligned_cols=31  Identities=26%  Similarity=0.382  Sum_probs=28.6

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R  415 (534)
                      |.|||+|| |-+|+.++..|.+.|++|++++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence            68999999 89999999999999999998865

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=93.43  E-value=0.044  Score=52.55  Aligned_cols=30  Identities=23%  Similarity=0.324  Sum_probs=28.0

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R  415 (534)
                      ++||+|+ |-+|+.++..|.+.|.+|++++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~   32 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            5999999 89999999999999999999876

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.36  E-value=0.028  Score=51.92  Aligned_cols=32  Identities=22%  Similarity=0.355  Sum_probs=29.5

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      +|||+|| |-+|+.++..|.+.|++|+.++|..
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            5999999 9999999999999999999999853

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.32  E-value=0.027  Score=46.28  Aligned_cols=34  Identities=29%  Similarity=0.290  Sum_probs=31.5

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .|+++|+|+|-+|..+|..|+++|++|+++.|+.
T Consensus        25 p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEccchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            4799999999999999999999999999998854

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=93.29  E-value=0.092  Score=45.34  Aligned_cols=105  Identities=15%  Similarity=0.218  Sum_probs=62.2

Q ss_pred             cEEEEEcCchhHHHHHHHHHHC-CCe-EEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAK-GAR-VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  462 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~-G~~-v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~~~  462 (534)
                      -++.|+|.|.+|+..+.++.+. +++ +.+++|+.++...      .......+... ....+|+|+.+||....     
T Consensus         4 irvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~------~~~~~~~~~~~-~~~~~D~Vvi~tp~~~h-----   71 (170)
T d1f06a1           4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK------TPVFDVADVDK-HADDVDVLFLCMGSATD-----   71 (170)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS------SCEEEGGGGGG-TTTTCSEEEECSCTTTH-----
T ss_pred             ceEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccccc------cccccchhhhh-hccccceEEEeCCCccc-----
Confidence            3689999999999999999875 455 5578888654211      11112233333 34578999999986542     


Q ss_pred             CCCCccccCCCCEEEEEecCCC-----h-hHHHHHHHHCCCeEecc
Q 009464          463 TPIPKHALGHYALVFDAVYTPK-----I-TRLLREAEESGATIVSG  502 (534)
Q Consensus       463 ~~i~~~~l~~~~~v~Dv~y~p~-----~-T~ll~~A~~~G~~ii~G  502 (534)
                      .++-...++.+.-+++ ...|.     . ..+.+.|++.|...+-|
T Consensus        72 ~~~a~~aL~aG~~vv~-~~~~~~~~~~~~~~l~~~A~~~~~~~~i~  116 (170)
T d1f06a1          72 IPEQAPKFAQFACTVD-TYDNHRDIPRHRQVMNEAATAAGNVALVS  116 (170)
T ss_dssp             HHHHHHHHTTTSEEEC-CCCCGGGHHHHHHHHHHHHHHHTCEEECS
T ss_pred             HHHHHHHHHCCCcEEE-ecCccccCHHHHHHHHHHHHhcCceEEEe
Confidence            1233345666554443 22332     1 24545667777664433

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.96  E-value=0.061  Score=43.51  Aligned_cols=35  Identities=29%  Similarity=0.335  Sum_probs=32.2

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .+|+++|+|+|-+|-.+|..|++.|.+|+++.|..
T Consensus        21 ~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcchhheEeeccc
Confidence            46899999999999999999999999999998854

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.85  E-value=0.044  Score=47.26  Aligned_cols=70  Identities=13%  Similarity=0.087  Sum_probs=42.2

Q ss_pred             EEEEEcCchhHHHHHHH--HHHC----CCeEEEEeCCHHHHHHHHHHHc---Ccccc---cccccccCCCCceEEEEcCC
Q 009464          386 LFVVIGAGGAGKALAYG--AKAK----GARVVIANRTYDRARELAETVG---GHALS---LADLENFNPEDGMILANTTS  453 (534)
Q Consensus       386 ~vlVlGaGG~graia~~--L~~~----G~~v~i~~R~~~~a~~la~~~~---~~~~~---~~~~~~~~~~~~divVn~t~  453 (534)
                      |+.|+|||..|-+.++.  +...    +.+|.+++.++++++...+...   .....   -.+..+ ....+|+||.+++
T Consensus         2 KIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~-~l~~aDvVVita~   80 (162)
T d1up7a1           2 RIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEG-AVVDAKYVIFQFR   80 (162)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHH-HHTTCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCccc-ccCCCCEEEEecc
Confidence            58999999666555533  2222    2389999999999875443221   11000   111122 3457899999998


Q ss_pred             CCC
Q 009464          454 IGM  456 (534)
Q Consensus       454 ~g~  456 (534)
                      ++.
T Consensus        81 ~~~   83 (162)
T d1up7a1          81 PGG   83 (162)
T ss_dssp             TTH
T ss_pred             cCC
Confidence            763

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.74  E-value=0.039  Score=51.79  Aligned_cols=31  Identities=29%  Similarity=0.442  Sum_probs=28.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      +|+|||||-+|.++|+.|++.|. +|+|+.|+
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            58999999999999999999997 79999875

>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Thiamin phosphate synthase
family: Thiamin phosphate synthase
domain: Thiamin phosphate synthase
species: Archaeon (Pyrococcus furiosus) [TaxId: 2261]

Probab=92.72  E-value=1.5  Score=38.56  Aligned_cols=151  Identities=15%  Similarity=0.163  Sum_probs=83.5

Q ss_pred             ccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhh---HHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHH
Q 009464           30 IMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE---NIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRL  106 (534)
Q Consensus        30 l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~---~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~  106 (534)
                      ||.++.....+.++++++.|+|+|-+|.-.+...+-.+   .+..+-+..+.|+|+.-+                  ++.
T Consensus        11 ITd~~~~~~~~~v~~~l~~Gv~~vqlR~k~~~~~e~~~~a~~l~~i~~~~~~~liind~------------------~~l   72 (206)
T d1xi3a_          11 ITDRRLKPEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALFFVDDR------------------VDV   72 (206)
T ss_dssp             ECCTTTSCHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCEEEEESC------------------HHH
T ss_pred             EeCCcccCHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCeEEechh------------------HHH
Confidence            66777666677788888999999999975544211111   233333556889998622                  234


Q ss_pred             HHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEcc-c-CCHHH---
Q 009464          107 AMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATT-A-LDITD---  181 (534)
Q Consensus       107 ~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~~-~-~~~~D---  181 (534)
                      |.+.+++.|=+.-+.......+.   ...+.-+..|.|+.      ++    +.++...|+|.+=+-.. + .+..+   
T Consensus        73 A~~~~adGvHl~~~~~~~~~~~~---~~~~~iig~s~h~~------~e----~~~a~~~g~DYi~~gpvf~T~tk~~~~~  139 (206)
T d1xi3a_          73 ALAVDADGVQLGPEDMPIEVAKE---IAPNLIIGASVYSL------EE----ALEAEKKGADYLGAGSVFPTKTKEDARV  139 (206)
T ss_dssp             HHHHTCSEEEECTTSCCHHHHHH---HCTTSEEEEEESSH------HH----HHHHHHHTCSEEEEECSSCC----CCCC
T ss_pred             HHhccCceEeeccccccHhhhhh---cccccccccccCCH------HH----HHHHHhcCCCEEEecccccccccccccc
Confidence            66778998877544322111111   13344566788752      23    34555679998877532 2 12222   


Q ss_pred             --HHHHHHHHhhccCCCCCEEEEecCcccchhhhc
Q 009464          182 --VARVFQITVHSQVSHVPIIGLVMGERGLISRIL  214 (534)
Q Consensus       182 --~~~l~~~~~~~~~~~~p~I~~~MG~~G~~sRi~  214 (534)
                        ...+-++...   ...|+++++==..-.+..++
T Consensus       140 ~g~~~l~~~~~~---~~~Pv~AiGGI~~~ni~~~~  171 (206)
T d1xi3a_         140 IGLEGLRKIVES---VKIPVVAIGGINKDNAREVL  171 (206)
T ss_dssp             CHHHHHHHHHHH---CSSCEEEESSCCTTTHHHHH
T ss_pred             ccHHHHHHHHHh---cCCCEEEECCCCHHHHHHHH
Confidence              2222233332   34899987532333444443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.71  E-value=0.025  Score=56.86  Aligned_cols=34  Identities=29%  Similarity=0.392  Sum_probs=31.1

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANR  415 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R  415 (534)
                      +++.+|+|+|+||+|-.++..|+..|+ +|+|++.
T Consensus        35 l~~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          35 LDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             HHHCCEEEECSSTTHHHHHHHHHTTTCCCEEEECC
T ss_pred             HhcCeEEEECCCHHHHHHHHHHHHcCCCeEEEEEC
Confidence            456789999999999999999999999 9999875

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.60  E-value=0.056  Score=44.45  Aligned_cols=45  Identities=16%  Similarity=0.183  Sum_probs=36.9

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHc
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY--------DRARELAETVG  428 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~--------~~a~~la~~~~  428 (534)
                      .++++|+|+|-+|-.+|..|++.|.+|+++.|..        +-++.+.+.+.
T Consensus        26 p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~~il~~~d~~~~~~l~~~l~   78 (125)
T d1ojta2          26 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNE   78 (125)
T ss_dssp             CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHG
T ss_pred             CCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeeccccccchhhHHHHHHHHHH
Confidence            4799999999999999999999999999998743        44555555554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.50  E-value=0.057  Score=51.32  Aligned_cols=32  Identities=28%  Similarity=0.240  Sum_probs=30.2

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~  416 (534)
                      |++||+|| |-+|+.++..|.+.|++|+.++|.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            78999999 999999999999999999999984

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=92.41  E-value=0.19  Score=47.20  Aligned_cols=30  Identities=23%  Similarity=0.377  Sum_probs=27.5

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R  415 (534)
                      +|||+|+ |-+|+.++..|.+.|++|+.++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~   32 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            6999999 88999999999999999998863

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.28  E-value=0.053  Score=51.92  Aligned_cols=33  Identities=30%  Similarity=0.369  Sum_probs=30.1

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCC--eEEEEeCCH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTY  417 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~--~v~i~~R~~  417 (534)
                      |+|+|||||-+|.++|..|++.|.  +|+|+.|+.
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            789999999999999999998875  899999875

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=92.25  E-value=0.17  Score=43.19  Aligned_cols=93  Identities=13%  Similarity=0.058  Sum_probs=56.1

Q ss_pred             EEEEEcCchhHHHH-HHHHHHCCC-eE-EEEeCCHH-HHHHHHHHHcCcc--cccccccc-cCCCCceEEEEcCCCCCCC
Q 009464          386 LFVVIGAGGAGKAL-AYGAKAKGA-RV-VIANRTYD-RARELAETVGGHA--LSLADLEN-FNPEDGMILANTTSIGMQP  458 (534)
Q Consensus       386 ~vlVlGaGG~grai-a~~L~~~G~-~v-~i~~R~~~-~a~~la~~~~~~~--~~~~~~~~-~~~~~~divVn~t~~g~~~  458 (534)
                      ++.|+|+|++|+.. ...|..... ++ .+++|+.+ +..+.++.++...  ..++++.+ ....+.|+|+.+||.|.+.
T Consensus         6 rvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpag~h~   85 (157)
T d1nvmb1           6 KVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAHV   85 (157)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHHH
T ss_pred             EEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEcCCchhHH
Confidence            79999999999864 556655544 65 55688765 5556777776432  11222211 1234689999999876431


Q ss_pred             CCCCCCCCccccCCCCEEEEEec
Q 009464          459 KVDETPIPKHALGHYALVFDAVY  481 (534)
Q Consensus       459 ~~~~~~i~~~~l~~~~~v~Dv~y  481 (534)
                      .   ........+.+..|+|..-
T Consensus        86 ~---~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          86 Q---NEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             H---HHHHHHHHCTTCEEEECST
T ss_pred             H---hHHHHHHHHcCCEEEEccc
Confidence            1   0011223466778888874

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.16  E-value=0.019  Score=55.21  Aligned_cols=70  Identities=11%  Similarity=0.064  Sum_probs=44.0

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcc--ccccc---ccccCCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~--~~~~~---~~~~~~~~~divVn~t~~g  455 (534)
                      +|||+|+ |-+|+.++..|.+.|. +|+.+++...+...+.+.-..+.  .++.+   +.+.....+|+||+++...
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~   78 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA   78 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccc
Confidence            6899999 8899999999999995 89988876544333221100011  11111   1111233589999988764

>d1ub3a_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Deoxyribose-phosphate aldolase DeoC
species: Thermus thermophilus [TaxId: 274]

Probab=92.11  E-value=1.1  Score=39.90  Aligned_cols=144  Identities=21%  Similarity=0.226  Sum_probs=93.5

Q ss_pred             CCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhC
Q 009464           32 GESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELG  111 (534)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~~~~~~  111 (534)
                      ..|.+++.+-++++.+.++..|=++-.+.+      ..+..++..+. -+.|+=.-+.|..   +.+.+..-.+.+++.|
T Consensus        14 ~~T~~~i~~lc~~A~~~~~~aVcV~P~~v~------~a~~~l~~s~v-~v~~VigFP~G~~---~~~~k~~e~~~ai~~G   83 (211)
T d1ub3a_          14 TATLEEVAKAAEEALEYGFYGLCIPPSYVA------WVRARYPHAPF-RLVTVVGFPLGYQ---EKEVKALEAALACARG   83 (211)
T ss_dssp             TCCHHHHHHHHHHHHHHTCSEEECCGGGHH------HHHHHCTTCSS-EEEEEESTTTCCS---CHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHhCCeEEEECHHHHH------HHHHHccCCCC-ceEEEEecccccC---cHHHHHHHHHHHHHcC
Confidence            346778888888888888776644433221      23333333343 4556655566554   4466777788999999


Q ss_pred             CcEEEEecccc----------chhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEc----cc
Q 009464          112 ADYIDVELQVA----------REFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFAT----TA  176 (534)
Q Consensus       112 ~~~iDiEl~~~----------~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~----~~  176 (534)
                      ++-||+=++..          .+.++.+.. .+....|+|+-.+.+    +.+++.+..+-+.+.|+|.+|--+    ..
T Consensus        84 A~EiD~V~n~~~~~~g~~~~v~~ei~~v~~~~~~~~lKVIlEt~~L----~~~ei~~a~~~a~~aGadfiKTSTG~~~~g  159 (211)
T d1ub3a_          84 ADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYF----SPEEIARLAEAAIRGGADFLKTSTGFGPRG  159 (211)
T ss_dssp             CSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGS----CHHHHHHHHHHHHHHTCSEEECCCSSSSCC
T ss_pred             CCeEEEeeccchhhcCCHHHHHHHHHHHHHhccCCceEEEeccccC----CHHHHHHHHHHHHHhccceEEecCCCCCCC
Confidence            99999976542          112333333 233456899977655    457888888888999999999964    33


Q ss_pred             CCHHHHHHHHHHH
Q 009464          177 LDITDVARVFQIT  189 (534)
Q Consensus       177 ~~~~D~~~l~~~~  189 (534)
                      -+++|+..+.+..
T Consensus       160 at~e~v~~m~~~~  172 (211)
T d1ub3a_         160 ASLEDVALLVRVA  172 (211)
T ss_dssp             CCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHh
Confidence            5888886655544

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.10  E-value=0.1  Score=44.41  Aligned_cols=74  Identities=15%  Similarity=0.052  Sum_probs=47.3

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCC-------eEEEEeC--CHHHHHHHHHHHcCcc------cc-cccccccCCCCceE
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGA-------RVVIANR--TYDRARELAETVGGHA------LS-LADLENFNPEDGMI  447 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~-------~v~i~~R--~~~~a~~la~~~~~~~------~~-~~~~~~~~~~~~di  447 (534)
                      -+|.|+|| |.+|.++++.|+..+.       .+.+++.  +.++++.+..++....      .. ..+..+ .....|+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dv   82 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEI-AFKDLDV   82 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHH-HTTTCSE
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCccccc-ccCCceE
Confidence            37999997 9999999999986542       4677664  4456666655432100      01 111222 3567899


Q ss_pred             EEEcCCCCCCCC
Q 009464          448 LANTTSIGMQPK  459 (534)
Q Consensus       448 vVn~t~~g~~~~  459 (534)
                      +|-+++....|.
T Consensus        83 VVitag~~~~~g   94 (154)
T d5mdha1          83 AILVGSMPRRDG   94 (154)
T ss_dssp             EEECCSCCCCTT
T ss_pred             EEEecccCCCCC
Confidence            999998765544

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.08  E-value=0.11  Score=46.18  Aligned_cols=74  Identities=19%  Similarity=0.216  Sum_probs=46.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM  456 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~  456 (534)
                      .++.||+||=+|+|-=..  +..++..|+ +|+.++.+.+.++...+....-.....|+.+ ..+.+|+||.+-|.|.
T Consensus        45 ~dl~Gk~VLDlGcGtG~l--~i~a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~-l~~~fD~Vi~NPPfg~  119 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGIL--ACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIMNPPFGS  119 (197)
T ss_dssp             TSSBTSEEEEETCTTCHH--HHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEECCCC--
T ss_pred             CCCCCCEEEEeCCCCcHH--HHHHHHcCCCcccccccCHHHHHHHHHccccccEEEEehhh-cCCcceEEEeCcccch
Confidence            467899999999972222  335667888 7999999977654433332211112233444 3467999998877653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.07  E-value=0.097  Score=46.53  Aligned_cols=40  Identities=18%  Similarity=0.221  Sum_probs=36.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  425 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~  425 (534)
                      ++.|+|+|-+|.++|..|++.|.+|+.++.+.++.+.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            5889999999999999999999999999999998877753

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=92.03  E-value=0.059  Score=49.84  Aligned_cols=31  Identities=26%  Similarity=0.514  Sum_probs=28.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      -|+|+|+|-+|.++|+.|+++|.+|+|+.+.
T Consensus         5 DvvIIGaGi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            4899999999999999999999999999874

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.02  E-value=0.059  Score=49.22  Aligned_cols=32  Identities=22%  Similarity=0.338  Sum_probs=29.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC-eEEEEeCCH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  417 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~-~v~i~~R~~  417 (534)
                      +|+|+|||-+|.++|..|++.|. +|+|+.|..
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            69999999999999999999997 899998854

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=91.78  E-value=0.073  Score=43.66  Aligned_cols=105  Identities=15%  Similarity=0.190  Sum_probs=63.2

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCc-----ccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~-----~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      |+++|+|.|..|+.++..|.  |.+|+++..++++.+.+... +..     ..+.+.+.++...+++.+|-+++--    
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~-~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d----   73 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLRS-GANFVHGDPTRVSDLEKANVRGARAVIVNLESD----   73 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHT-TCEEEESCTTSHHHHHHTTCTTCSEEEECCSSH----
T ss_pred             CEEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhc-CccccccccCCHHHHHHhhhhcCcEEEEeccch----
Confidence            57899999999999999984  55788889999988777543 322     2222233333567788888776421    


Q ss_pred             CCCCCCC----ccccCCCCEEEEEecCCChhHHHHHHHHCCCe-Eec
Q 009464          460 VDETPIP----KHALGHYALVFDAVYTPKITRLLREAEESGAT-IVS  501 (534)
Q Consensus       460 ~~~~~i~----~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~-ii~  501 (534)
                        ...+.    ...+.+...++-.+.++.....++.+   |+. ++.
T Consensus        74 --~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~---G~d~vi~  115 (129)
T d2fy8a1          74 --SETIHCILGIRKIDESVRIIAEAERYENIEQLRMA---GADQVIS  115 (129)
T ss_dssp             --HHHHHHHHHHHHHCSSSCEEEECSSGGGHHHHHHH---HCSEEEC
T ss_pred             --hhhHHHHHHHHHHCCCceEEEEEcCHHHHHHHHHC---CCCEEEC
Confidence              10000    01223443455555566666666544   664 443

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.70  E-value=0.047  Score=50.83  Aligned_cols=33  Identities=30%  Similarity=0.341  Sum_probs=30.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      +|+|+|+|-+|.++|..|++.|.+|.|+.|..+
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            699999999999999999999999999998753

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=91.66  E-value=0.14  Score=46.22  Aligned_cols=37  Identities=27%  Similarity=0.285  Sum_probs=33.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      .+++..++++.|||.+|-+++..|.+.|. ++++++|.
T Consensus        22 ~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          22 KKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             CCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             CChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence            56888999999999999999999999999 89999974

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.62  E-value=0.051  Score=48.77  Aligned_cols=33  Identities=12%  Similarity=0.053  Sum_probs=29.5

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCC-------CeEEEEeCCH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKG-------ARVVIANRTY  417 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G-------~~v~i~~R~~  417 (534)
                      .+|+|||||.+|.++|+.|+++|       ++|+|+.+..
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            58999999999999999999988       4799998864

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.59  E-value=0.072  Score=48.22  Aligned_cols=32  Identities=34%  Similarity=0.547  Sum_probs=29.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      -|+|+|+|.+|..+|..|++.|.+|+|+.++.
T Consensus         4 DViIIGaG~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            38999999999999999999999999998764

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=91.58  E-value=0.24  Score=43.08  Aligned_cols=75  Identities=15%  Similarity=-0.012  Sum_probs=48.6

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHC---CC----eEEEEeCCH--HHHHHHHHHHcCcc-------cccccccccCCCCce
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAK---GA----RVVIANRTY--DRARELAETVGGHA-------LSLADLENFNPEDGM  446 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~---G~----~v~i~~R~~--~~a~~la~~~~~~~-------~~~~~~~~~~~~~~d  446 (534)
                      .-+|.|+|| |.+|.++++.|++.   |.    .+.+++...  ++++.++-++....       ....+..+ .....|
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~-~~~~aD  102 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYE-VFEDVD  102 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH-HTTTCS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchh-hccCCc
Confidence            347999997 99999999999874   32    566666544  55666666553211       11122222 456789


Q ss_pred             EEEEcCCCCCCCC
Q 009464          447 ILANTTSIGMQPK  459 (534)
Q Consensus       447 ivVn~t~~g~~~~  459 (534)
                      ++|-+++....|.
T Consensus       103 vVvi~ag~~rkpg  115 (175)
T d7mdha1         103 WALLIGAKPRGPG  115 (175)
T ss_dssp             EEEECCCCCCCTT
T ss_pred             eEEEeeccCCCCC
Confidence            9999987765543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=91.52  E-value=0.074  Score=48.70  Aligned_cols=37  Identities=27%  Similarity=0.295  Sum_probs=32.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE  422 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~  422 (534)
                      .|+|||||.+|..+|..|+++|.+|.|+.++..-...
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~~G~k   42 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRK   42 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred             cEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence            5899999999999999999999999999988654333

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.52  E-value=0.076  Score=49.87  Aligned_cols=30  Identities=33%  Similarity=0.405  Sum_probs=28.2

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      |+|||||-+|.++|+.|+++|.+|+|+.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence            799999999999999999999999999764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.37  E-value=0.063  Score=42.73  Aligned_cols=38  Identities=11%  Similarity=0.200  Sum_probs=32.2

Q ss_pred             ccccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          379 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       379 ~~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      ..++.||+|+|+|+|-.|.-+|..|++.+.++++..|.
T Consensus        27 ~~~f~gK~VlVVG~g~Sa~dia~~l~~~ak~v~~~~~r   64 (107)
T d2gv8a2          27 PELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLL   64 (107)
T ss_dssp             GGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECT
T ss_pred             hhhcCCCeEEEECCCCCHHHHHHHHHHhcCEEEEEEec
Confidence            35689999999999999999999999887776666554

>d1ad1a_ c.1.21.1 (A:) Dihydropteroate synthetase {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Dihydropteroate synthetase-like
family: Dihydropteroate synthetase
domain: Dihydropteroate synthetase
species: Staphylococcus aureus [TaxId: 1280]

Probab=91.27  E-value=2.2  Score=39.07  Aligned_cols=158  Identities=14%  Similarity=0.163  Sum_probs=98.2

Q ss_pred             CCHHHHHHHHHhhhhcCCCEEEEEecCCC----CCChhhHHHHHh---hh-CCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 009464           33 ESVDKMVVDMGKANASGADLVEIRLDGLK----NFNPRENIKTLI---KE-SPVPTLFTYRPIWEGGQYDGDENERVDVL  104 (534)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~D~vElRlD~l~----~~~~~~~l~~l~---~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~~l  104 (534)
                      .+.++++..++..++.|||+|.+=----.    ..++.+++.++.   +. .+..+++.+=|.            +.+..
T Consensus        23 ~~~~~a~~~~~~m~~~GAdiIDIGaeSTrPga~~is~~eE~~Rl~pvi~~l~~~~~~iSIDT~------------~~eVa   90 (264)
T d1ad1a_          23 NNVESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVLPVVEAIVGFDVKISVDTF------------RSEVA   90 (264)
T ss_dssp             CSHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEECS------------CHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCcCCHHHHHHhhhhHhhhhcccCcccchhhh------------hHHHH
Confidence            47788999999999999999998655432    223344444432   21 234556666652            45788


Q ss_pred             HHHHHhCCcEEE-Ee-ccccchhhHHhhccCCCCceEEEeeecCCCCCC----HH----HHHHHHHHHHHcCCCEEEEEc
Q 009464          105 RLAMELGADYID-VE-LQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPS----VE----DLSNLVARIQASGADIVKFAT  174 (534)
Q Consensus       105 ~~~~~~~~~~iD-iE-l~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~----~~----el~~~~~~~~~~gaDi~Kia~  174 (534)
                      +.|++.|+++|- |- ....++..+ +..  ..+..+|+-|+  .++|.    ..    .+.+.++++...|.+--+|+.
T Consensus        91 ~~al~~Ga~iINDVs~g~~d~~~~~-~va--~~~~~~ilmH~--~~~~~~~~~~~~v~~~~~~~~~~~~~~Gi~~~~Iil  165 (264)
T d1ad1a_          91 EACLKLGVDIINDQWAGLYDHRMFQ-VVA--KYDAEIVLMHN--GNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWL  165 (264)
T ss_dssp             HHHHHTTCCEEEETTTTSSCTHHHH-HHH--HTTCEEEEECC--CCTTCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred             HHHHhcCCcEeeccccccccccHHH-HHh--hcCcceeeeee--ccccccCccchhhhhHHHHHHHHHHhhccccceEEe
Confidence            899999999985 54 233344333 332  24667777543  34442    22    355566677888876667876


Q ss_pred             -----ccCCHHHHHHHHHHHhhccCCCCCEEEEecCccc
Q 009464          175 -----TALDITDVARVFQITVHSQVSHVPIIGLVMGERG  208 (534)
Q Consensus       175 -----~~~~~~D~~~l~~~~~~~~~~~~p~I~~~MG~~G  208 (534)
                           ..++.++++.|++-+..+...+.|+ .++...+.
T Consensus       166 DPGiGFgKt~~~n~~ll~~l~~~~~~g~Pi-LiG~SRKs  203 (264)
T d1ad1a_         166 DPGIGFAKTRNEEAEVMARLDELVATEYPV-LLATSRKR  203 (264)
T ss_dssp             ECCTTSSCCHHHHHHHHHCHHHHHTTCSCB-EECCTTSH
T ss_pred             ccCcCccccchhHHHHHHHHHHhhccCCce-eeeccHHH
Confidence                 4589999999888665553345664 33333343

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.02  E-value=0.12  Score=44.60  Aligned_cols=71  Identities=10%  Similarity=0.027  Sum_probs=41.8

Q ss_pred             EEEEEcCc--hhHHHHHHHHHHC---CC-eEEEEeCCHHH--HHHHHHH-------HcCc--ccccccccccCCCCceEE
Q 009464          386 LFVVIGAG--GAGKALAYGAKAK---GA-RVVIANRTYDR--ARELAET-------VGGH--ALSLADLENFNPEDGMIL  448 (534)
Q Consensus       386 ~vlVlGaG--G~graia~~L~~~---G~-~v~i~~R~~~~--a~~la~~-------~~~~--~~~~~~~~~~~~~~~div  448 (534)
                      ++.|+|||  |.+.+++.-+...   .. +|++++.++++  ++.+-..       ++..  .....+..+ .+..+|+|
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~-al~gaDvV   81 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRR-ALDGADFV   81 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHH-HHTTCSEE
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchh-hcCCCCEE
Confidence            68999998  5556665555442   23 89999998754  4433211       1111  111122222 34578999


Q ss_pred             EEcCCCCCC
Q 009464          449 ANTTSIGMQ  457 (534)
Q Consensus       449 Vn~t~~g~~  457 (534)
                      |++++++..
T Consensus        82 v~ta~~~~~   90 (169)
T d1s6ya1          82 TTQFRVGGL   90 (169)
T ss_dssp             EECCCTTHH
T ss_pred             EEccccCCC
Confidence            999998754

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=91.01  E-value=0.059  Score=47.06  Aligned_cols=34  Identities=21%  Similarity=0.260  Sum_probs=30.3

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      +++.++|||+|.+|..+|..+++.|.+++|+.|.
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEee
Confidence            3578999999999999999999999999998653

>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: CutC-like
family: CutC-like
domain: Copper homeostasis protein CutC
species: Shigella flexneri [TaxId: 623]

Probab=90.99  E-value=2.5  Score=38.26  Aligned_cols=146  Identities=18%  Similarity=0.167  Sum_probs=91.5

Q ss_pred             CCCHHHHHHHHHhhhhcCCCEEEEEecCCC-CCCh-hhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHH---HHH
Q 009464           32 GESVDKMVVDMGKANASGADLVEIRLDGLK-NFNP-RENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDV---LRL  106 (534)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~D~vElRlD~l~-~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~---l~~  106 (534)
                      -.+++++.    .|.+.|||-|||.-++-. .+.| ...++.+++..++|+-+=+|.+  ||.|-.+++|...+   ++.
T Consensus         7 v~s~~~a~----~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~iPv~vMIRPR--~GdF~Ys~~E~~~M~~di~~   80 (247)
T d1twda_           7 CYSMECAL----TAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPR--GGDFCYSDGEFAAILEDVRT   80 (247)
T ss_dssp             ESSHHHHH----HHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHCCSCEEEBCCSS--SSCSCCCHHHHHHHHHHHHH
T ss_pred             eCCHHHHH----HHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHhcCCCeEEEEecC--CCCCCCCHHHHHHHHHHHHH
Confidence            34555554    456789999999988654 3333 2346677777899999999964  77777777665444   556


Q ss_pred             HHHhCCcEEEEe-----ccccchhhHHhhccCCCCceEEEeeec-CCCCCCHHHHHHHHHHHHHcCCCEEEEEcccCCHH
Q 009464          107 AMELGADYIDVE-----LQVAREFNDSIRGKKPEKCKVIVSSHN-YQYTPSVEDLSNLVARIQASGADIVKFATTALDIT  180 (534)
Q Consensus       107 ~~~~~~~~iDiE-----l~~~~~~~~~l~~~~~~~~kiI~S~H~-f~~tp~~~el~~~~~~~~~~gaDi~Kia~~~~~~~  180 (534)
                      +.+.|++.|=+=     -..+.+..+++... ..+.+  +.||- |+.+++.   .+-++.+.++|.|=+==..-+.+..
T Consensus        81 ~k~~G~dGvV~G~L~~dg~iD~~~~~~L~~~-a~~l~--vTFHRAfD~~~d~---~~al~~Li~lG~~rILTSGg~~~a~  154 (247)
T d1twda_          81 VRELGFPGLVTGVLDVDGNVDMPRMEKIMAA-AGPLA--VTFHRAFDMCANP---LYTLNNLAELGIARVLTSGQKSDAL  154 (247)
T ss_dssp             HHHTTCSEEEECCBCTTSSBCHHHHHHHHHH-HTTSE--EEECGGGGGCSCH---HHHHHHHHHHTCCEEEECTTSSSTT
T ss_pred             HHHcCCCeEEEEEECCCCCccHHHHHHHHHH-hcccC--eeeehhhhhhCCH---HHHHHHHHhcCCCeEeccCCCCchh
Confidence            677888876542     22234556666542 12344  55676 8888864   4556777777854433334445666


Q ss_pred             HHHHHHHHH
Q 009464          181 DVARVFQIT  189 (534)
Q Consensus       181 D~~~l~~~~  189 (534)
                      |....++-+
T Consensus       155 ~G~~~L~~L  163 (247)
T d1twda_         155 QGLSKIMEL  163 (247)
T ss_dssp             TTHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            665444433

>d1yx1a1 c.1.15.7 (A:3-252) Hypothetical protein PA2260 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Xylose isomerase-like
family: KguE-like
domain: Hypothetical protein PA2260
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.96  E-value=0.47  Score=43.02  Aligned_cols=76  Identities=25%  Similarity=0.273  Sum_probs=49.1

Q ss_pred             HHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEec--cCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEec
Q 009464           42 MGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR--PIWEGGQYDGDENERVDVLRLAMELGADYIDVEL  119 (534)
Q Consensus        42 ~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R--~~~eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl  119 (534)
                      ++.+.+.|+|.||+|-+++......+.++.+.+..++++....-  ...+.+..   .++..+.+..|..+|+.+|-+..
T Consensus        25 l~~~a~~G~dgIEi~~~~~~~~~~~~~l~~~~~~~GL~i~~~~~~~~~~~~~~~---~~~~~~~i~~A~~LG~~~v~~~~  101 (250)
T d1yx1a1          25 LPLLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLECVFSSPLELWREDGQL---NPELEPTLRRAEACGAGWLKVSL  101 (250)
T ss_dssp             HHHHHHHTCSEEEEEGGGCSSCCCHHHHHHHHHHTTCEEEEEEEEEEECTTSSB---CTTHHHHHHHHHHTTCSEEEEEE
T ss_pred             HHHHHHhCCCEEEEecccCCCcchHHHHHHHHHHcCCEEEEecccccccCchhh---HHHHHHHHHHHHHhCCCEEEEee
Confidence            34455689999999999887655455677777778887754321  11222222   23445677888888998887654


Q ss_pred             c
Q 009464          120 Q  120 (534)
Q Consensus       120 ~  120 (534)
                      .
T Consensus       102 g  102 (250)
T d1yx1a1         102 G  102 (250)
T ss_dssp             E
T ss_pred             c
Confidence            3

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.92  E-value=0.11  Score=49.49  Aligned_cols=33  Identities=21%  Similarity=0.246  Sum_probs=30.3

Q ss_pred             CCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC
Q 009464          383 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       383 ~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R  415 (534)
                      +.|++||+|+ |-+|+.++..|.+.|.+|+.++|
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            4589999999 99999999999999999998875

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.91  E-value=0.081  Score=47.47  Aligned_cols=33  Identities=27%  Similarity=0.247  Sum_probs=29.0

Q ss_pred             cEEEEEcCchhHHHHHHHHHHC--CCeEEEEeCCH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAK--GARVVIANRTY  417 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~--G~~v~i~~R~~  417 (534)
                      .+|+|||||.+|.++|..|.+.  |++|+|+.+..
T Consensus         2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            3799999999999999999875  67999999874

>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Archaeal fructose 1,6-bisphosphate aldolase
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=90.79  E-value=2.7  Score=38.02  Aligned_cols=123  Identities=19%  Similarity=0.142  Sum_probs=76.1

Q ss_pred             HHhhhhcCCCEEEEEecCCCCCChhhHHHH---Hhh---hCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhCCcEE
Q 009464           42 MGKANASGADLVEIRLDGLKNFNPRENIKT---LIK---ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYI  115 (534)
Q Consensus        42 ~~~~~~~~~D~vElRlD~l~~~~~~~~l~~---l~~---~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~~~~~~~~~i  115 (534)
                      +++++..|+|+|=+.+.+-.+. ..+++..   +.+   ..++|+++-.-+...+-.-..+.+.-....+.+.++|+|.|
T Consensus        96 ve~a~rlGadaV~~~v~~g~~~-e~~~l~~~~~v~~e~~~~glP~v~e~~p~g~~~~~~~~~~~v~~aaria~ElGaDiv  174 (251)
T d1ojxa_          96 VEEAVSLGASAVGYTIYPGSGF-EWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVNETAPEIVAYAARIALELGADAM  174 (251)
T ss_dssp             HHHHHHTTCSEEEEEECTTSTT-HHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEE
T ss_pred             HHHHHhchhceEEEEEeCCCCc-hHHHHHHHHHHHHHHHHcCCeEEEEEeecCCccccCCCHHHHHHHHHHHHHhCCCEE
Confidence            3455678999999999765443 3334433   332   34899998875542222222333433344778889999999


Q ss_pred             EEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCC
Q 009464          116 DVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD  168 (534)
Q Consensus       116 DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaD  168 (534)
                      =+++-.+.+.+..+... .....++++-=  .+..+.+++.+..+.+.+.||-
T Consensus       175 K~~~p~~~~~~~~~v~~-a~~~pv~~~gG--~~~~~~~~~l~~~~~a~~~Ga~  224 (251)
T d1ojxa_         175 KIKYTGDPKTFSWAVKV-AGKVPVLMSGG--PKTKTEEDFLKQVEGVLEAGAL  224 (251)
T ss_dssp             EECCCSSHHHHHHHHHH-TTTSCEEEECC--SCCSSHHHHHHHHHHHHHTTCC
T ss_pred             EecCCCcHHHHHHHHHh-cCCCceEEeCC--CCCCCHHHHHHHHHHHHHCCCc
Confidence            99998776555554432 23445666532  2233567788888888888874

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.58  E-value=0.14  Score=41.04  Aligned_cols=36  Identities=28%  Similarity=0.479  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHH
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  418 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~  418 (534)
                      ...++.|+|+|-.||-++.+..++|+++++++.+.+
T Consensus        10 ~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2          10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            356899999999999999999999999999998754

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=90.45  E-value=0.17  Score=45.95  Aligned_cols=71  Identities=14%  Similarity=0.133  Sum_probs=48.2

Q ss_pred             cEEEEEcCch----hHHHHHHHHHHC--CCeEE-EEeCCHHHHHHHHHHHcCcc-ccccccccc-CCCCceEEEEcCCCC
Q 009464          385 KLFVVIGAGG----AGKALAYGAKAK--GARVV-IANRTYDRARELAETVGGHA-LSLADLENF-NPEDGMILANTTSIG  455 (534)
Q Consensus       385 k~vlVlGaGG----~graia~~L~~~--G~~v~-i~~R~~~~a~~la~~~~~~~-~~~~~~~~~-~~~~~divVn~t~~g  455 (534)
                      =++.|+|+|+    +++.-+.++.+.  +++|+ |++|+.+++++++++++... ..++++.++ .....|+|+.+||..
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~iD~V~i~tp~~   96 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVP   96 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCHH
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhcccccccceeeccCCCc
Confidence            4789999986    556666667664  45755 89999999999999986432 223333321 124689999998743

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.42  E-value=0.088  Score=49.69  Aligned_cols=31  Identities=19%  Similarity=0.389  Sum_probs=28.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .++|||||-+|.++|+.|++.|.+|.|+.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~   33 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKR   33 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTCCEEEECSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCCcEEEEECC
Confidence            5899999999999999999999999999875

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.42  E-value=0.093  Score=49.73  Aligned_cols=34  Identities=24%  Similarity=0.299  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      +.-.|+|||||-+|.++|+.|.+.|.+++|+.++
T Consensus         6 ~~~dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~   39 (298)
T d1w4xa1           6 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETA   39 (298)
T ss_dssp             SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCCCEEEECccHHHHHHHHHHHhCCCCEEEEEcC
Confidence            3457999999999999999999999999999875

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.42  E-value=0.12  Score=46.11  Aligned_cols=37  Identities=24%  Similarity=0.398  Sum_probs=32.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .+++||+|+|+|+|-.|--+|+.+++.+.+++++-|+
T Consensus        28 ~~~~gK~V~VvG~G~Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECCCccHHHHHHHHHhhhccccccccc
Confidence            4688999999999999999999999999987777665

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.27  E-value=0.11  Score=49.42  Aligned_cols=32  Identities=28%  Similarity=0.224  Sum_probs=28.4

Q ss_pred             cEE-EEEcC-chhHHHHHHHHHHCCCeEEEEeCC
Q 009464          385 KLF-VVIGA-GGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       385 k~v-lVlGa-GG~graia~~L~~~G~~v~i~~R~  416 (534)
                      |+| ||+|+ |-+|+.++..|.++|++|+.++|.
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            456 99999 789999999999999999988874

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=89.94  E-value=0.12  Score=48.41  Aligned_cols=31  Identities=39%  Similarity=0.652  Sum_probs=28.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      -|+|||+|.+|..+|..|++.|.+|+|+.+.
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEecC
Confidence            4899999999999999999999999999864

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.82  E-value=0.1  Score=44.76  Aligned_cols=31  Identities=32%  Similarity=0.458  Sum_probs=26.8

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEe
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIAN  414 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~  414 (534)
                      +++|+|+|+|.+|-.+|..|.++|.+++|+-
T Consensus         3 ~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           3 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCEEEECCcHHHHHHHHHHHHcCCceEEEE
Confidence            5789999999999999999999998654443

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.68  E-value=0.14  Score=48.71  Aligned_cols=31  Identities=19%  Similarity=0.233  Sum_probs=28.5

Q ss_pred             cEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC
Q 009464          385 KLFVVIGA-GGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       385 k~vlVlGa-GG~graia~~L~~~G~~v~i~~R  415 (534)
                      |+|||+|+ |-+|.+++..|.+.|.+|++++|
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~   34 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            78999999 99999999999999999988853

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.66  E-value=0.17  Score=48.54  Aligned_cols=35  Identities=20%  Similarity=0.214  Sum_probs=31.5

Q ss_pred             cCCcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeCC
Q 009464          382 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       382 l~~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .++.+|||+|+ |-+|+.++..|.+.|.+|++++|.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~   48 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWK   48 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence            46788999999 999999999999999999998764

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.64  E-value=0.097  Score=45.80  Aligned_cols=32  Identities=16%  Similarity=0.230  Sum_probs=29.0

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCCCeEEEEeC
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G~~v~i~~R  415 (534)
                      .++++|+|+|.+|..+|..|++.|.+++++.+
T Consensus         5 ~~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           5 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred             cceEEEECCCHHHHHHHHHHHHcCCcEEEEEe
Confidence            47899999999999999999999998888864

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=89.61  E-value=0.034  Score=51.56  Aligned_cols=62  Identities=11%  Similarity=0.150  Sum_probs=37.9

Q ss_pred             EEEEEcC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCccccccccccc-CCCCceEEEEcCCCC
Q 009464          386 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF-NPEDGMILANTTSIG  455 (534)
Q Consensus       386 ~vlVlGa-GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~-~~~~~divVn~t~~g  455 (534)
                      ++||+|+ |-+|++++..|.+.|..|.+..|+.+        +..+..+.+.+.+. ...++|+|||+++..
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~--------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~   65 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE--------FCGDFSNPKGVAETVRKLRPDVIVNAAAHT   65 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSS--------SCCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEECCCcc--------ccCcCCCHHHHHHHHHHcCCCEEEEecccc
Confidence            5999999 99999999999988875555444322        11111111222210 012469999998754

>d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Xylose isomerase-like
family: IolI-like
domain: Putative cytoplasmic protein STM4435
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.50  E-value=1.5  Score=39.72  Aligned_cols=77  Identities=16%  Similarity=0.117  Sum_probs=44.5

Q ss_pred             CHHHHHHHHHhhhhcCCCEEEEEecCCCCC----ChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCC-H---HHHHHHHH
Q 009464           34 SVDKMVVDMGKANASGADLVEIRLDGLKNF----NPRENIKTLIKESPVPTLFTYRPIWEGGQYDGD-E---NERVDVLR  105 (534)
Q Consensus        34 ~~~~~~~~~~~~~~~~~D~vElRlD~l~~~----~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~-~---~~~~~~l~  105 (534)
                      ++++.++.+   .+.|.|.||||.|.....    ...+.++.+.+..+++++--. .   ++.+... +   +...++++
T Consensus        19 ~lee~l~~a---~~~G~dgiEl~~~~~~~~~~~~~~~~~~k~~l~~~gl~i~~l~-~---~~~~~~~~~~~~~~~~~~i~   91 (271)
T d2q02a1          19 SIEAFFRLV---KRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTIN-A---VYPFNQLTEEVVKKTEGLLR   91 (271)
T ss_dssp             CHHHHHHHH---HHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEE-E---ETTTTSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHH---HHhCCCEEEEecCcccccccccCCHHHHHHHHHHcCCcEEEee-c---ccccCCCCHHHHHHHHHHHH
Confidence            466666544   457999999998865432    223567777777777654221 1   1223222 2   22234566


Q ss_pred             HHHHhCCcEEEE
Q 009464          106 LAMELGADYIDV  117 (534)
Q Consensus       106 ~~~~~~~~~iDi  117 (534)
                      .|.++|+..|=+
T Consensus        92 ~a~~lG~~~v~~  103 (271)
T d2q02a1          92 DAQGVGARALVL  103 (271)
T ss_dssp             HHHHHTCSEEEE
T ss_pred             HHHHcCCcEEEE
Confidence            666778777644

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.43  E-value=0.2  Score=42.50  Aligned_cols=34  Identities=32%  Similarity=0.360  Sum_probs=29.8

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeCC
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  416 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R~  416 (534)
                      -+++|+|+|+|-+|--+|..+.+.|+ .|+++.|.
T Consensus        44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            46789999999999999999999999 68888764

>d1o0ya_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Deoxyribose-phosphate aldolase DeoC
species: Thermotoga maritima [TaxId: 2336]

Probab=89.42  E-value=3.6  Score=37.31  Aligned_cols=142  Identities=20%  Similarity=0.116  Sum_probs=91.0

Q ss_pred             CCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhC
Q 009464           32 GESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELG  111 (534)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~~l~~~~~~~  111 (534)
                      ..|.+++.+.++++...++..|=++--+.+      .....++.+++. +.|+=.-+.|-.   +.+.+..-.+.+++.|
T Consensus        47 ~~t~e~i~~lc~~A~~~~~aaVcV~P~~v~------~a~~~L~gs~v~-v~tVigFP~G~~---~~~~K~~Ea~~Ai~~G  116 (251)
T d1o0ya_          47 FATPDDIKKLCLEARENRFHGVCVNPCYVK------LAREELEGTDVK-VVTVVGFPLGAN---ETRTKAHEAIFAVESG  116 (251)
T ss_dssp             TCCHHHHHHHHHHHHHHTCSEEEECGGGHH------HHHHHHTTSCCE-EEEEESTTTCCS---CHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHhhcCceEEEECHHHHH------HHHHHhcCCCce-EEeeccCCCCCC---cHHHHHHHHHHHHHcC
Confidence            345788888888888888777655443322      344444555554 456644444332   4466777788999999


Q ss_pred             CcEEEEecccc----------chhhHHhhc-cCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEEEc----cc
Q 009464          112 ADYIDVELQVA----------REFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFAT----TA  176 (534)
Q Consensus       112 ~~~iDiEl~~~----------~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Kia~----~~  176 (534)
                      ++-||+=++..          .+.++.+.. .+..-.|+|+-...+    +.+++....+-+...|||.+|--+    ..
T Consensus       117 AdEID~Vin~~~l~~g~~~~v~~ei~~v~~~~~~~~lKVIlEt~~L----~~~e~~~a~~ia~~aGadfvKTSTGf~~~g  192 (251)
T d1o0ya_         117 ADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYL----DTEEKIAACVISKLAGAHFVKTSTGFGTGG  192 (251)
T ss_dssp             CSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC----CHHHHHHHHHHHHHTTCSEEECCCSSSSCC
T ss_pred             CceEEEEeccchhhcCCHHHHHHHHHHHHHHhcccceeeeeccccc----CcHHHHHHHHHHHHhCcceeeccCCCCCCC
Confidence            99999976642          122333333 234567888854433    567788888888899999999854    34


Q ss_pred             CCHHHHHHHHH
Q 009464          177 LDITDVARVFQ  187 (534)
Q Consensus       177 ~~~~D~~~l~~  187 (534)
                      -+++|+..+.+
T Consensus       193 at~e~V~~m~~  203 (251)
T d1o0ya_         193 ATAEDVHLMKW  203 (251)
T ss_dssp             CCHHHHHHHHH
T ss_pred             cCHHHHHHHHH
Confidence            57888754433

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=88.86  E-value=0.11  Score=48.80  Aligned_cols=31  Identities=16%  Similarity=0.293  Sum_probs=27.1

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEe
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIAN  414 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~  414 (534)
                      .|+|||+|+ |-+|+.++.+|.+.|..++++.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~   33 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLR   33 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEec
Confidence            478999999 9999999999999999666554

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.80  E-value=0.16  Score=44.93  Aligned_cols=31  Identities=26%  Similarity=0.339  Sum_probs=28.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      -++|||+|.+|.++|..++++|.+|+|+.+.
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence            4899999999999999999999999999764

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.79  E-value=0.17  Score=44.68  Aligned_cols=31  Identities=23%  Similarity=0.381  Sum_probs=28.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      -++|||+|.+|.++|..++++|.+|.|+.+.
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            3799999999999999999999999999875

>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: KDPG aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.74  E-value=1.2  Score=39.28  Aligned_cols=117  Identities=20%  Similarity=0.260  Sum_probs=70.7

Q ss_pred             eEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEE---EeccCCCCCCCCCCHHHH
Q 009464           24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLF---TYRPIWEGGQYDGDENER  100 (534)
Q Consensus        24 ~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~---T~R~~~eGG~~~~~~~~~  100 (534)
                      +.|. .|+..+.+++..-++.+.+.|.+++|+.+.   ..+..+.++.+++...--+++   |+.+          .   
T Consensus        10 ~iip-vlr~~~~~~a~~~~~al~~~Gi~~iEitlr---~p~a~~~i~~l~~~~~~~~~vGaGTV~~----------~---   72 (202)
T d1wa3a1          10 KIVA-VLRANSVEEAKEKALAVFEGGVHLIEITFT---VPDADTVIKELSFLKEKGAIIGAGTVTS----------V---   72 (202)
T ss_dssp             CEEE-EECCSSHHHHHHHHHHHHHTTCCEEEEETT---STTHHHHHHHTHHHHHTTCEEEEESCCS----------H---
T ss_pred             CEEE-EEECCCHHHHHHHHHHHHHcCCCEEEEecC---CccHHHHHHHHHHhcCCCcEEEeccccc----------H---
Confidence            4443 488999999999999888899999999875   222234555554322112333   4443          1   


Q ss_pred             HHHHHHHHHhCCcEEEEeccccchhhHHhhccCCCCceEEEeeecCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 009464          101 VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (534)
Q Consensus       101 ~~~l~~~~~~~~~~iDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~el~~~~~~~~~~gaDi~Ki  172 (534)
                       +-++.+++.|++|+ |-=....++.+...   ..+..+|-.-    .||+  |    +.++.++|+|++|+
T Consensus        73 -~~~~~a~~aGa~fi-vsP~~~~~v~~~~~---~~~i~~iPGv----~Tps--E----i~~A~~~G~~~lK~  129 (202)
T d1wa3a1          73 -EQCRKAVESGAEFI-VSPHLDEEISQFCK---EKGVFYMPGV----MTPT--E----LVKAMKLGHTILKL  129 (202)
T ss_dssp             -HHHHHHHHHTCSEE-ECSSCCHHHHHHHH---HHTCEEECEE----CSHH--H----HHHHHHTTCCEEEE
T ss_pred             -HHHHHHHhhcccEE-eCCCCcHHHHHHHH---hcCCceeCCc----CcHH--H----HHHHHHCCCCEEEe
Confidence             34667889999987 32233344443332   2344444432    2553  3    34456789999997

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.60  E-value=0.2  Score=44.48  Aligned_cols=31  Identities=29%  Similarity=0.344  Sum_probs=28.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      -++|||+|.+|..+|..+++.|.+|.|+.+.
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence            4899999999999999999999999999864

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.48  E-value=0.13  Score=41.52  Aligned_cols=108  Identities=17%  Similarity=0.226  Sum_probs=63.0

Q ss_pred             cEEEEEcCc----hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCCC
Q 009464          385 KLFVVIGAG----GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  460 (534)
Q Consensus       385 k~vlVlGaG----G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~~  460 (534)
                      |++.|+|++    -.|..+...|.+.|++|+-+|.+.+.       +.+. ..+.++.+ .....|+++-++|....+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~-------i~G~-~~y~sl~~-lp~~~D~vvi~vp~~~~~~-   71 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE-------IEGL-KCYRSVRE-LPKDVDVIVFVVPPKVGLQ-   71 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-------ETTE-ECBSSGGG-SCTTCCEEEECSCHHHHHH-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc-------ccCc-cccccchh-ccccceEEEEEeCHHHHHH-
Confidence            689999984    67999999999999999999876432       1111 11233333 3346788887776432111 


Q ss_pred             CCCCCCccccCCC-CEEEEEecCCChhHHHHHHHHCCCeEeccHHHHH
Q 009464          461 DETPIPKHALGHY-ALVFDAVYTPKITRLLREAEESGATIVSGLEMFI  507 (534)
Q Consensus       461 ~~~~i~~~~l~~~-~~v~Dv~y~p~~T~ll~~A~~~G~~ii~Gl~ml~  507 (534)
                          +-.+....+ ..++ +--......+.+.|++.|.+++.+-=|++
T Consensus        72 ----~l~~~~~~g~k~v~-~~~g~~~~~~~~~a~~~gi~vigpnC~~v  114 (116)
T d1y81a1          72 ----VAKEAVEAGFKKLW-FQPGAESEEIRRFLEKAGVEYSFGRCIMV  114 (116)
T ss_dssp             ----HHHHHHHTTCCEEE-ECTTSCCHHHHHHHHHHTCEEECSCCHHH
T ss_pred             ----HHHHHHhcCCceEE-eccchhhHHHHHHHHHcCCEEEcCCCCCE
Confidence                111111111 1111 11122356788889999998876654444

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.47  E-value=0.22  Score=44.92  Aligned_cols=38  Identities=21%  Similarity=0.186  Sum_probs=33.2

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHH--------------------CCC-eEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKA--------------------KGA-RVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~--------------------~G~-~v~i~~R~~  417 (534)
                      .++++|+|+|||+|-+|.-+|..|.+                    .|+ +|++++|..
T Consensus        35 ~~~~gk~VvVIGgGNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg   93 (225)
T d1cjca1          35 PDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG   93 (225)
T ss_dssp             CCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred             ccccCceEEEECCchhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence            46789999999999999999998887                    588 999999854

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.38  E-value=0.23  Score=44.51  Aligned_cols=37  Identities=35%  Similarity=0.441  Sum_probs=31.9

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHH--------------------HCCC-eEEEEeCC
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAK--------------------AKGA-RVVIANRT  416 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~--------------------~~G~-~v~i~~R~  416 (534)
                      .++.+|+|+|||+|-+|.-+|.-|+                    +.|+ +|++++|.
T Consensus        35 ~~~~gk~VvVIGgGNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RR   92 (216)
T d1lqta1          35 PDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRR   92 (216)
T ss_dssp             CCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSS
T ss_pred             ccccCceEEEECCCchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEEC
Confidence            4567999999999999999988776                    6788 89999874

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=88.35  E-value=0.21  Score=44.75  Aligned_cols=71  Identities=24%  Similarity=0.162  Sum_probs=46.6

Q ss_pred             cCC-cEEEEEcCchhHHHHHHHHHHC------CCeEEEEeCCHHHHHHHHHHHcCcccc--cccccccCCCCceEEEEcC
Q 009464          382 LAG-KLFVVIGAGGAGKALAYGAKAK------GARVVIANRTYDRARELAETVGGHALS--LADLENFNPEDGMILANTT  452 (534)
Q Consensus       382 l~~-k~vlVlGaGG~graia~~L~~~------G~~v~i~~R~~~~a~~la~~~~~~~~~--~~~~~~~~~~~~divVn~t  452 (534)
                      ++| |++.|+|-|--|+|-|..|...      |.+|+|--|...+..+.|+.-+-+..+  .-+..+ +...+|+|...+
T Consensus        41 ~kg~KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~E-Av~~ADiVmiLl  119 (226)
T d1qmga2          41 FKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWE-TISGSDLVLLLI  119 (226)
T ss_dssp             TTTCSEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHH-HHHTCSEEEECS
T ss_pred             hcCCCEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHH-HHhhCCEEEEec
Confidence            567 8999999999999999999994      467888777665555555554433211  111222 223467777776


Q ss_pred             C
Q 009464          453 S  453 (534)
Q Consensus       453 ~  453 (534)
                      |
T Consensus       120 P  120 (226)
T d1qmga2         120 S  120 (226)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Dihydropteroate synthetase-like
family: Dihydropteroate synthetase
domain: Dihydropteroate synthetase
species: Escherichia coli [TaxId: 562]

Probab=88.22  E-value=1.8  Score=40.13  Aligned_cols=163  Identities=13%  Similarity=0.187  Sum_probs=98.2

Q ss_pred             CCHHHHHHHHHhhhhcCCCEEEEEecCCC----CCChhhHHHH-------HhhhCCCcEEEEeccCCCCCCCCCCHHHHH
Q 009464           33 ESVDKMVVDMGKANASGADLVEIRLDGLK----NFNPRENIKT-------LIKESPVPTLFTYRPIWEGGQYDGDENERV  101 (534)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~D~vElRlD~l~----~~~~~~~l~~-------l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~  101 (534)
                      .+.+++++.++..+..|||+|.+=----.    ..++.+++.+       +++.  .++++.+=|.            +.
T Consensus        35 ~~~~~a~~~a~~mi~~GAdiIDIGgeSTrPga~~vs~eeE~~Rl~pvi~~l~~~--~~~~iSIDT~------------~~  100 (282)
T d1ajza_          35 NSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQR--FEVWISVDTS------------KP  100 (282)
T ss_dssp             SHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHH--CCCEEEEECC------------CH
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCccccccccCCcHHHHHHHHHHHHHHHhhc--ccceEEEEec------------Ch
Confidence            35678888899888999999988654322    2233333333       3333  3445566652            44


Q ss_pred             HHHHHHHHhCCcEE-EEeccccchhhHHhhccCCCCceEEEeeecC-----CCCCC--------HHHHHHHHHHHHHcCC
Q 009464          102 DVLRLAMELGADYI-DVELQVAREFNDSIRGKKPEKCKVIVSSHNY-----QYTPS--------VEDLSNLVARIQASGA  167 (534)
Q Consensus       102 ~~l~~~~~~~~~~i-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f-----~~tp~--------~~el~~~~~~~~~~ga  167 (534)
                      +..+.|++.|+++| ||--...++.++.+..   .+..+|+.|+.-     +..|.        .+.+.+.++.+.+.|-
T Consensus       101 eVa~~al~~Ga~iINDvsg~~~~~~~~~va~---~~~~~vlmh~~g~p~~~~~~~~y~dv~~~v~~~~~~~~~~~~~~GI  177 (282)
T d1ajza_         101 EVIRESAKVGAHIINDIRSLSEPGALEAAAE---TGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGI  177 (282)
T ss_dssp             HHHHHHHHTTCCEECCTTTTCSTTHHHHHHH---HTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhcCceEEechhhcccchhHHHhhc---cCceEEEeccCCCccccccCCcccchhhhhHHHHHHHHHHHHHcCC
Confidence            68889999999987 4543333344443332   366788877531     11121        1346667777888885


Q ss_pred             CEEEEEccc-----CCHHHHHHHHHHHhhccCCCCCEEEEecCcccchhhh
Q 009464          168 DIVKFATTA-----LDITDVARVFQITVHSQVSHVPIIGLVMGERGLISRI  213 (534)
Q Consensus       168 Di~Kia~~~-----~~~~D~~~l~~~~~~~~~~~~p~I~~~MG~~G~~sRi  213 (534)
                      +-=+|++=|     ++.++++.+++-+..+...+.|+ .++......+..+
T Consensus       178 ~~~~IilDPGiGFgK~~~~n~~ll~~l~~~~~~~~Pi-LvG~SRKsfi~~~  227 (282)
T d1ajza_         178 AKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPL-LVGMSRKSMIGQL  227 (282)
T ss_dssp             CGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCB-EECCTTCHHHHHH
T ss_pred             cHhhEecCCCcCcCCChhhhHHHHhhcchhhccccce-EEeccHHHHHHHH
Confidence            434677655     89999999888776664445665 3444444444444

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=88.09  E-value=0.18  Score=47.70  Aligned_cols=31  Identities=42%  Similarity=0.699  Sum_probs=28.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      -|+|+|+|.+|..+|..|++.|.+|+|+.+.
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3899999999999999999999999999874

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.81  E-value=0.043  Score=49.25  Aligned_cols=24  Identities=33%  Similarity=0.313  Sum_probs=22.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCe
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGAR  409 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~  409 (534)
                      +|+|||||-+|.++|+.|++.|.+
T Consensus         2 kV~VIGaGi~GlstA~~L~~~G~~   25 (246)
T d1kifa1           2 RVVVIGAGVIGLSTALCIHERYHS   25 (246)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHTT
T ss_pred             EEEEECchHHHHHHHHHHHHCCCC
Confidence            699999999999999999999963

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.80  E-value=0.32  Score=39.43  Aligned_cols=36  Identities=14%  Similarity=0.274  Sum_probs=30.1

Q ss_pred             CcEEEEEcCch-----------hHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          384 GKLFVVIGAGG-----------AGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       384 ~k~vlVlGaGG-----------~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      .|++||+|+|+           ++-.++++|.++|++++++|-|++.
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeT   50 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPET   50 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTS
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhh
Confidence            57999999983           4556788999999999999998774

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.77  E-value=0.31  Score=40.90  Aligned_cols=35  Identities=23%  Similarity=0.198  Sum_probs=30.7

Q ss_pred             CCcEEEEE--cCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          383 AGKLFVVI--GAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       383 ~~k~vlVl--GaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .++.++|+  |+|-+|..+|..|+++|++|+++.|..
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            35777777  888999999999999999999999864

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.70  E-value=0.24  Score=44.19  Aligned_cols=32  Identities=34%  Similarity=0.531  Sum_probs=29.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      -++|||+|.+|.++|..+++.|.+|.|+.+..
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence            48999999999999999999999999998753

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=87.68  E-value=0.16  Score=38.01  Aligned_cols=33  Identities=24%  Similarity=0.293  Sum_probs=30.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      |++.|+|+|-.||-++.+-.++|+++.+++-+.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            689999999999999999999999999998653

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.51  E-value=0.18  Score=47.59  Aligned_cols=32  Identities=34%  Similarity=0.602  Sum_probs=29.3

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      .-|+|||+|.+|..+|..+++.|.+|+|+.+.
T Consensus        20 ~DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          20 TQVLVVGAGSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             cCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            45999999999999999999999999999764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=87.49  E-value=0.22  Score=42.47  Aligned_cols=31  Identities=29%  Similarity=0.404  Sum_probs=28.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      -|+|||+|.+|..+|..+++.|.++.++.|.
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCCeEEEEEEe
Confidence            3899999999999999999999999998863

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=87.25  E-value=0.21  Score=47.18  Aligned_cols=29  Identities=31%  Similarity=0.422  Sum_probs=27.6

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R  415 (534)
                      |+|||+|.+|..+|..+++.|.+|+|+.+
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK   36 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGLSTIVLSL   36 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence            89999999999999999999999999875

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.21  E-value=0.15  Score=42.65  Aligned_cols=112  Identities=18%  Similarity=0.132  Sum_probs=65.1

Q ss_pred             CcEEEEEcCc----hhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          384 GKLFVVIGAG----GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       384 ~k~vlVlGaG----G~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      -|++.|+|++    ..|..++..|.+.|++|+.+|...+.       +.+. ..+.++.+ .....|+++-+++....+ 
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~-------i~G~-~~~~sl~d-lp~~iD~v~i~vp~~~~~-   88 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE-------VLGR-KCYPSVLD-IPDKIEVVDLFVKPKLTM-   88 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-------ETTE-ECBSSGGG-CSSCCSEEEECSCHHHHH-
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc-------cCCC-cccccccc-cCccceEEEEEeCHHHHH-
Confidence            5799999984    78999999999999999999976321       1111 12333444 334578888777643211 


Q ss_pred             CCCCCCCccccCCCCEEEEEecCCChhHHHHHHHHCCCeEecc-HHHHHHH
Q 009464          460 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG-LEMFIGQ  509 (534)
Q Consensus       460 ~~~~~i~~~~l~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~G-l~ml~~Q  509 (534)
                          ++-++....+.-.+=+...-......+.|++.|+.++.. .-|..+|
T Consensus        89 ----~~~~e~~~~g~k~v~~~~G~~~ee~~~~a~~~gi~vig~~C~~v~~~  135 (139)
T d2d59a1          89 ----EYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIVANRCMMREHE  135 (139)
T ss_dssp             ----HHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEEEESCCHHHHHH
T ss_pred             ----HHHHHHHHhCCCEEEEeccccCHHHHHHHHHCCCEEEcCCcChhhhh
Confidence                111111111111111222233456778899999987754 4444443

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.10  E-value=0.21  Score=44.21  Aligned_cols=32  Identities=25%  Similarity=0.382  Sum_probs=29.5

Q ss_pred             cEEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          385 KLFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       385 k~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      ..++|||+|.+|..+|..++++|.+|+|+.+.
T Consensus         6 ~DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             cCEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence            35899999999999999999999999999875

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.97  E-value=0.29  Score=43.01  Aligned_cols=31  Identities=32%  Similarity=0.439  Sum_probs=28.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      -++|||+|.+|..+|..+++.|.+|.|+.+.
T Consensus         5 DviVIG~GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           5 ETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            4899999999999999999999999999765

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.67  E-value=0.25  Score=43.38  Aligned_cols=30  Identities=27%  Similarity=0.439  Sum_probs=28.0

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      ++|||+|.+|..+|..+++.|.+|.|+.+.
T Consensus         6 viIIGgGpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence            899999999999999999999999999863

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=86.59  E-value=0.29  Score=40.52  Aligned_cols=112  Identities=17%  Similarity=0.125  Sum_probs=66.2

Q ss_pred             CcEEEEEcC----chhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCcccccccccccCCCCceEEEEcCCCCCCCC
Q 009464          384 GKLFVVIGA----GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  459 (534)
Q Consensus       384 ~k~vlVlGa----GG~graia~~L~~~G~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~~~~~~~divVn~t~~g~~~~  459 (534)
                      .|++.|+|+    +-.|..++..|.+.|+++++++-+... +    ++.+. ..+.++.+ .....|+++-+++....+.
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~----~i~g~-~~~~~l~~-i~~~iD~v~v~~p~~~v~~   85 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-E----ELFGE-EAVASLLD-LKEPVDILDVFRPPSALMD   85 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-S----EETTE-ECBSSGGG-CCSCCSEEEECSCHHHHTT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-c----eeece-ecccchhh-ccCCCceEEEeccHHHHHH
Confidence            578999999    478999999999999999999865321 0    11111 12233333 3346799888886432221


Q ss_pred             CCCCCCCcccc--CCCCEEEEEecCCChhHHHHHHHHCCCeEecc-HHHHHHH
Q 009464          460 VDETPIPKHAL--GHYALVFDAVYTPKITRLLREAEESGATIVSG-LEMFIGQ  509 (534)
Q Consensus       460 ~~~~~i~~~~l--~~~~~v~Dv~y~p~~T~ll~~A~~~G~~ii~G-l~ml~~Q  509 (534)
                           +-.+..  ..+.+++  .-.-.+..+.+.|++.|.++|.+ .-|..+|
T Consensus        86 -----~v~~~~~~g~k~i~~--q~G~~~~e~~~~a~~~Gi~vV~~~C~~ie~~  131 (136)
T d1iuka_          86 -----HLPEVLALRPGLVWL--QSGIRHPEFEKALKEAGIPVVADRCLMVEHK  131 (136)
T ss_dssp             -----THHHHHHHCCSCEEE--CTTCCCHHHHHHHHHTTCCEEESCCHHHHHH
T ss_pred             -----HHHHHHhhCCCeEEE--ecCccCHHHHHHHHHcCCEEEcCCccHHHHH
Confidence                 111111  1112211  11223567889999999987755 5555555

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=86.57  E-value=0.36  Score=42.01  Aligned_cols=71  Identities=14%  Similarity=0.207  Sum_probs=45.9

Q ss_pred             CCcEEEEE-cC-chhHHHHHHHHHHCCCeEEEEeCCHHHHHH---HHHHHcCcc-cccc-----cc----ccc---CCCC
Q 009464          383 AGKLFVVI-GA-GGAGKALAYGAKAKGARVVIANRTYDRARE---LAETVGGHA-LSLA-----DL----ENF---NPED  444 (534)
Q Consensus       383 ~~k~vlVl-Ga-GG~graia~~L~~~G~~v~i~~R~~~~a~~---la~~~~~~~-~~~~-----~~----~~~---~~~~  444 (534)
                      .|.+++|+ |+ ||+|.+++......|++|+.+.|+.++.++   .+++++.+. ++.+     +.    .+.   ....
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCC
Confidence            35678887 44 899999999988999988877776554443   445666542 2211     11    100   1346


Q ss_pred             ceEEEEcCC
Q 009464          445 GMILANTTS  453 (534)
Q Consensus       445 ~divVn~t~  453 (534)
                      +|+++|+.+
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            899999876

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.52  E-value=0.34  Score=38.64  Aligned_cols=34  Identities=26%  Similarity=0.221  Sum_probs=28.3

Q ss_pred             CcEEEEEcCchhHHHHHHHHHH---CCCeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKA---KGARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~---~G~~v~i~~R~~  417 (534)
                      .|+++|+|+|-+|-.+|..|.+   .|.+|+++.|..
T Consensus        18 p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECCChHHHHHHHHhHhhcccccccceecccc
Confidence            4799999999999999876665   478999998853

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.24  E-value=0.33  Score=39.74  Aligned_cols=37  Identities=24%  Similarity=0.361  Sum_probs=30.8

Q ss_pred             CCcEEEEEcCch-----------hHHHHHHHHHHCCCeEEEEeCCHHH
Q 009464          383 AGKLFVVIGAGG-----------AGKALAYGAKAKGARVVIANRTYDR  419 (534)
Q Consensus       383 ~~k~vlVlGaGG-----------~graia~~L~~~G~~v~i~~R~~~~  419 (534)
                      ..|++||+|+|+           ++-.++++|.+.|++++++|-|++.
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~T   53 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPAT   53 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTC
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHh
Confidence            358999999983           4566788999999999999998764

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=86.08  E-value=0.29  Score=45.19  Aligned_cols=35  Identities=34%  Similarity=0.474  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHH-CCCeEEEEeCCH
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKA-KGARVVIANRTY  417 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~-~G~~v~i~~R~~  417 (534)
                      ...-|+|+|||-+|.++|+.|++ .|.+|+|+.+..
T Consensus        32 ~e~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          32 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence            34679999999999999999987 599999999753

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.78  E-value=0.26  Score=43.90  Aligned_cols=30  Identities=27%  Similarity=0.386  Sum_probs=28.0

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R  415 (534)
                      -++|||+|.+|.++|..+++.|.+|.|+.+
T Consensus         5 DviVIG~GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           5 DLIIIGGGSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGCCCEEEECC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence            489999999999999999999999999984

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.78  E-value=0.29  Score=47.74  Aligned_cols=32  Identities=34%  Similarity=0.448  Sum_probs=29.0

Q ss_pred             EEEEEcCchhHHHHHHHHHH------CCCeEEEEeCCH
Q 009464          386 LFVVIGAGGAGKALAYGAKA------KGARVVIANRTY  417 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~------~G~~v~i~~R~~  417 (534)
                      -|+|+|||.+|.++|+.|++      .|.+|.|+.|..
T Consensus        34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             CEEEECCCHHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            59999999999999999997      789999999863

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=85.72  E-value=0.21  Score=47.64  Aligned_cols=32  Identities=19%  Similarity=0.103  Sum_probs=26.7

Q ss_pred             CcEEEEEcC-chhHHHHHHHHHHCCCeEEEEeC
Q 009464          384 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       384 ~k~vlVlGa-GG~graia~~L~~~G~~v~i~~R  415 (534)
                      -|+|||+|| |-+|+.++..|.+.|.+|.+++|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~   34 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL   34 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEE
Confidence            378999999 99999999999999986555443

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.59  E-value=0.68  Score=37.97  Aligned_cols=33  Identities=30%  Similarity=0.317  Sum_probs=27.7

Q ss_pred             CcEEEEEcCchhHHHHHHHHH----HCCCeEEEEeCC
Q 009464          384 GKLFVVIGAGGAGKALAYGAK----AKGARVVIANRT  416 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~----~~G~~v~i~~R~  416 (534)
                      .|+++|+|+|.+|-.+|..|+    +.|.+|+++.+.
T Consensus        37 ~k~i~IvGgG~~G~E~A~~l~~~~~~~g~~Vt~i~~~   73 (137)
T d1m6ia2          37 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPE   73 (137)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHhcCCEEEEeccc
Confidence            579999999999988888885    468899998764

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.73  E-value=0.43  Score=41.88  Aligned_cols=30  Identities=37%  Similarity=0.564  Sum_probs=28.0

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      ++|||+|.+|..+|..+++.|.+|.|+.+.
T Consensus         6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            799999999999999999999999999764

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=84.72  E-value=0.41  Score=43.58  Aligned_cols=30  Identities=33%  Similarity=0.579  Sum_probs=28.4

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      ++|||+|.+|..+|..+++.|.+|.|+.+.
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence            799999999999999999999999999874

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=84.37  E-value=0.4  Score=45.78  Aligned_cols=30  Identities=23%  Similarity=0.266  Sum_probs=28.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R  415 (534)
                      -|+|||+|-.|..+|+.|++.|.+|.|+.|
T Consensus         4 ~VIVVGsG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           4 PAVVIGTGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             eEEEeCcCHHHHHHHHHHHHCcCeEEEEec
Confidence            489999999999999999999999999976

>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 2,4-dienoyl-CoA reductase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.95  E-value=0.99  Score=42.93  Aligned_cols=94  Identities=17%  Similarity=0.118  Sum_probs=58.9

Q ss_pred             EEeccCCCHHHHHHH----HHhhhhcCCCEEEEEecC-------CCC---C--C-----h-------hhHHHHHhhhCCC
Q 009464           27 CVPIMGESVDKMVVD----MGKANASGADLVEIRLDG-------LKN---F--N-----P-------RENIKTLIKESPV   78 (534)
Q Consensus        27 cv~l~~~~~~~~~~~----~~~~~~~~~D~vElRlD~-------l~~---~--~-----~-------~~~l~~l~~~~~~   78 (534)
                      +-.++..++++++++    ++.+.++|.|.||+-.-.       |.+   .  |     .       .+.+..+++...-
T Consensus       128 p~~lt~~eI~~ii~~f~~aA~ra~~AGfDgVEIh~ahGyLl~qFlSp~~N~RtDeYGGs~enR~Rf~~Eii~air~~vg~  207 (330)
T d1ps9a1         128 PHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGN  207 (330)
T ss_dssp             CEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCS
T ss_pred             ChhcChhHHHHHHHHHHHHHHHHHHhCcCeeeeccchHHHHHHHHHhhcccccccCCccHhhhhHHHHHHHHHHHHHcCC
Confidence            345666666666544    445667899999997762       111   1  1     1       1345566666665


Q ss_pred             cEEEEeccCCCCCC-CCCCHHHHHHHHHHHHHhCCcEEEEecc
Q 009464           79 PTLFTYRPIWEGGQ-YDGDENERVDVLRLAMELGADYIDVELQ  120 (534)
Q Consensus        79 PiI~T~R~~~eGG~-~~~~~~~~~~~l~~~~~~~~~~iDiEl~  120 (534)
                      +.++.+|-..+... ...+.++-.++.+...+.|++++++-..
T Consensus       208 d~~v~~R~s~~d~~~~g~~~~~~~~~~~~l~~~g~d~~~~~~g  250 (330)
T d1ps9a1         208 DFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIG  250 (330)
T ss_dssp             SSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred             CceeEecccccccccCCCCHHHHHHHHHHHHHhhhhhhhcccc
Confidence            66667775433222 2236677888888888889999998554

>d1ad1a_ c.1.21.1 (A:) Dihydropteroate synthetase {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Dihydropteroate synthetase-like
family: Dihydropteroate synthetase
domain: Dihydropteroate synthetase
species: Staphylococcus aureus [TaxId: 1280]

Probab=83.79  E-value=1.9  Score=39.55  Aligned_cols=103  Identities=20%  Similarity=0.270  Sum_probs=62.1

Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEeccc--c-------chhhHHhh----ccCCCCceEEEeeecCCCCCCH
Q 009464           86 PIWEGGQYDGDENERVDVLRLAMELGADYIDVELQV--A-------REFNDSIR----GKKPEKCKVIVSSHNYQYTPSV  152 (534)
Q Consensus        86 ~~~eGG~~~~~~~~~~~~l~~~~~~~~~~iDiEl~~--~-------~~~~~~l~----~~~~~~~kiI~S~H~f~~tp~~  152 (534)
                      +-.+||++. +.+.-++..+..++.|+++|||=-.+  +       ++.++++.    ..+  ..++++|-=-+    ..
T Consensus        15 SFsdgg~~~-~~~~a~~~~~~m~~~GAdiIDIGaeSTrPga~~is~~eE~~Rl~pvi~~l~--~~~~~iSIDT~----~~   87 (264)
T d1ad1a_          15 SFSDGGKFN-NVESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVLPVVEAIV--GFDVKISVDTF----RS   87 (264)
T ss_dssp             GCSSTTTTC-SHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHT--TSSSEEEEECS----CH
T ss_pred             CCCCCCcCC-CHHHHHHHHHHHHHCCCCEEEECCccCCCCCCcCCHHHHHHhhhhHhhhhc--ccCcccchhhh----hH
Confidence            458899875 45566667778888999999993332  1       22222232    122  23567887422    22


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHhhccCCCCCEEEEecC
Q 009464          153 EDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVSHVPIIGLVMG  205 (534)
Q Consensus       153 ~el~~~~~~~~~~gaDi~Kia~~~~~~~D~~~l~~~~~~~~~~~~p~I~~~MG  205 (534)
                          +..+.+.+.|+||+-=+..-....+   ++++.++..   .|+|.|-|+
T Consensus        88 ----eVa~~al~~Ga~iINDVs~g~~d~~---~~~~va~~~---~~~ilmH~~  130 (264)
T d1ad1a_          88 ----EVAEACLKLGVDIINDQWAGLYDHR---MFQVVAKYD---AEIVLMHNG  130 (264)
T ss_dssp             ----HHHHHHHHTTCCEEEETTTTSSCTH---HHHHHHHTT---CEEEEECCC
T ss_pred             ----HHHHHHHhcCCcEeecccccccccc---HHHHHhhcC---cceeeeeec
Confidence                4566677889999875533222222   355555543   789998764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.46  E-value=0.58  Score=37.26  Aligned_cols=34  Identities=18%  Similarity=0.121  Sum_probs=28.2

Q ss_pred             CcEEEEEcCchhHHHHHHHHHHCC---CeEEEEeCCH
Q 009464          384 GKLFVVIGAGGAGKALAYGAKAKG---ARVVIANRTY  417 (534)
Q Consensus       384 ~k~vlVlGaGG~graia~~L~~~G---~~v~i~~R~~  417 (534)
                      .++++|+|+|.+|-.+|..|.+.|   .+|+++.|..
T Consensus        20 p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            479999999999999998777655   4799998753

>d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: Decarboxylase
domain: 3-keto-L-gulonate 6-phosphate decarboxylase
species: Escherichia coli [TaxId: 562]

Probab=82.97  E-value=2.5  Score=36.39  Aligned_cols=95  Identities=13%  Similarity=0.062  Sum_probs=62.4

Q ss_pred             CeEEEEeccCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhC-CCcEEEEeccCCCCCCCCCCHHHHH
Q 009464           23 PTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERV  101 (534)
Q Consensus        23 ~~~icv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~  101 (534)
                      .|++||.+-..|+++++..++. ....+|.+++-.+++..+.. +.+..+++.. +.+++...-. .+      ....  
T Consensus         1 ~p~l~vAlD~~~~~~~~~~~~~-~~~~vdiikig~~~~~~~G~-~~i~~l~~~~~~~~i~~d~k~-~d------~~~~--   69 (213)
T d1q6oa_           1 LPMLQVALDNQTMDSAYETTRL-IAEEVDIIEVGTILCVGEGV-RAVRDLKALYPHKIVLADAKI-AD------AGKI--   69 (213)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHH-HGGGCSEEEECHHHHHHHCT-HHHHHHHHHCTTSEEEEEEEE-CS------CHHH--
T ss_pred             CCcEEEEecCCCHHHHHHHHHh-cCCCccEEEeCeeccccCCH-HHHHHHHHhcccccceeEEee-cc------chHH--
Confidence            4899999999999999988887 45689999999988654332 3567777655 5566554322 11      2222  


Q ss_pred             HHHHHHHHhCCcEEEEeccccchhhHHh
Q 009464          102 DVLRLAMELGADYIDVELQVAREFNDSI  129 (534)
Q Consensus       102 ~~l~~~~~~~~~~iDiEl~~~~~~~~~l  129 (534)
                       ..+.+.+.|+|++-+=.....+..+..
T Consensus        70 -~~~~~~~~gad~vtvh~~~g~~~~~~~   96 (213)
T d1q6oa_          70 -LSRMCFEANADWVTVICCADINTAKGA   96 (213)
T ss_dssp             -HHHHHHHTTCSEEEEETTSCHHHHHHH
T ss_pred             -HHHHHHHcCCCEEEEeccCCchHHHHH
Confidence             223445678999888655544434333

>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.36  E-value=0.35  Score=45.42  Aligned_cols=35  Identities=26%  Similarity=0.396  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCchhHHHHHHHHHHC--CCeEEEEeCCH
Q 009464          383 AGKLFVVIGAGGAGKALAYGAKAK--GARVVIANRTY  417 (534)
Q Consensus       383 ~~k~vlVlGaGG~graia~~L~~~--G~~v~i~~R~~  417 (534)
                      .++.++|+|+|.+|.++|+.|++.  |.+|+|+.++.
T Consensus        49 ~~~~~~~~g~g~~g~~~a~~~~~~~~~~~~~~~~~~~   85 (311)
T d2gjca1          49 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV   85 (311)
T ss_dssp             TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEcCC
Confidence            356799999999999999999964  88999998753

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=82.25  E-value=0.64  Score=42.00  Aligned_cols=31  Identities=29%  Similarity=0.495  Sum_probs=27.9

Q ss_pred             EEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          387 FVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       387 vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      |+|+|+|.+|-.+|.+.++.|+++.++..+.
T Consensus         5 VIVIGgG~AG~eAA~~aAR~G~ktllit~~~   35 (230)
T d2cula1           5 VLIVGAGFSGAETAFWLAQKGVRVGLLTQSL   35 (230)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEEecc
Confidence            8999999999999999999999888886653

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.17  E-value=0.51  Score=39.47  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=26.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~  416 (534)
                      |++|+|+|-+|-.+|..|++ +.+|+++.|.
T Consensus         2 rVvIIGgG~~G~e~A~~l~~-~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVGNGPGGFELAKQLSQ-TYEVTVIDKE   31 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHTT-TSEEEEECSS
T ss_pred             eEEEECCcHHHHHHHHHHHc-CCCEEEEecc
Confidence            79999999999999999964 7799999874

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=82.12  E-value=0.61  Score=40.37  Aligned_cols=31  Identities=10%  Similarity=0.089  Sum_probs=27.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCC--eEEEEeCC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRT  416 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~--~v~i~~R~  416 (534)
                      |++|+|+|-+|-.+|..|.+.+.  +|+++.|+
T Consensus         2 KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~~~   34 (198)
T d1nhpa1           2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKG   34 (198)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence            69999999999999999998865  89999875

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=81.99  E-value=0.48  Score=44.40  Aligned_cols=32  Identities=25%  Similarity=0.286  Sum_probs=28.2

Q ss_pred             EEEEEcCchhHHHHHHHHH-----HCCCeEEEEeCCH
Q 009464          386 LFVVIGAGGAGKALAYGAK-----AKGARVVIANRTY  417 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~-----~~G~~v~i~~R~~  417 (534)
                      -|+|+|||-+|.++|..|+     +.|.+|+|+.|..
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            5899999999999999996     4689999999853

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=81.96  E-value=0.53  Score=44.96  Aligned_cols=30  Identities=27%  Similarity=0.300  Sum_probs=28.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R  415 (534)
                      -|+|||+|-.|..+|+.|++.|.+|+|+.|
T Consensus         9 dvIVVGsG~aG~v~A~rLaeaG~~VlvLEa   38 (370)
T d3coxa1           9 PALVIGSGYGGAVAALRLTQAGIPTQIVEM   38 (370)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCeEEEEeC
Confidence            589999999999999999999999999976

>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Succinate dehydogenase
species: Escherichia coli [TaxId: 562]

Probab=81.82  E-value=0.4  Score=45.43  Aligned_cols=30  Identities=37%  Similarity=0.496  Sum_probs=27.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R  415 (534)
                      -|+|+|+|.+|..+|..+++.|.+|+|+.+
T Consensus         9 DVlVVG~G~AGl~AAl~aa~~G~~V~lleK   38 (330)
T d1neka2           9 DAVVIGAGGAGMRAALQISQSGQTCALLSK   38 (330)
T ss_dssp             SCEEECCSHHHHHHHHHHHHTTCCCEEECS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCeEEEEeC
Confidence            489999999999999999999999999865

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.63  E-value=0.61  Score=37.81  Aligned_cols=38  Identities=18%  Similarity=0.139  Sum_probs=33.3

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      .-+++|+++|+|+|-.|-..|..|.+.+.+|+++-|..
T Consensus        23 ~~~~~k~V~VvGgGdsA~e~A~~L~~~a~~V~li~r~~   60 (126)
T d1trba2          23 FFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD   60 (126)
T ss_dssp             GGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred             HHhCCCEEEEECCCHHHHHHHHHHhhcCCcEEEEeecc
Confidence            34689999999999999999999998877999998764

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=81.59  E-value=0.8  Score=41.11  Aligned_cols=35  Identities=26%  Similarity=0.355  Sum_probs=29.3

Q ss_pred             ccCCcEEEEEc-----------------CchhHHHHHHHHHHCCCeEEEEeC
Q 009464          381 ALAGKLFVVIG-----------------AGGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       381 ~l~~k~vlVlG-----------------aGG~graia~~L~~~G~~v~i~~R  415 (534)
                      +++|+++||++                 +|-+|.++|.++..+|++|+++.-
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g   54 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG   54 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhc
Confidence            56788888876                 378999999999999999888754

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=81.51  E-value=0.59  Score=44.15  Aligned_cols=30  Identities=23%  Similarity=0.330  Sum_probs=27.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeC
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANR  415 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R  415 (534)
                      -++|+|+|-.|..+|..|++.|.+|.|+.+
T Consensus         6 DviIVGsG~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           6 DVVIVGSGPIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHhhCCCeEEEEec
Confidence            489999999999999999999999999875

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.25  E-value=0.82  Score=39.67  Aligned_cols=39  Identities=18%  Similarity=0.198  Sum_probs=33.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Q 009464          386 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  425 (534)
Q Consensus       386 ~vlVlGaGG~graia~~L~~~G~~v~i~~R~~~~a~~la~  425 (534)
                      ++.|+|.|-+|..+|..|+ .|++|+.++-+.++.+++.+
T Consensus         2 kI~ViGlG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLLS-LQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHHH-CCCcEEEEECCHHHHHHHhh
Confidence            5789999999999987664 69999999999998887754

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.25  E-value=0.36  Score=49.38  Aligned_cols=34  Identities=18%  Similarity=0.225  Sum_probs=31.0

Q ss_pred             cCCcEEEEEcCchhHHHHHHHHHHCCC-eEEEEeC
Q 009464          382 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANR  415 (534)
Q Consensus       382 l~~k~vlVlGaGG~graia~~L~~~G~-~v~i~~R  415 (534)
                      +.+.+|+|+|+||+|-.+++.|+..|+ +++|++.
T Consensus        23 L~~s~VlvvG~gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINATATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCCSHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECCCHHHHHHHHHHHHhcCCEEEEEcC
Confidence            456799999999999999999999999 9999875

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=80.79  E-value=0.74  Score=37.33  Aligned_cols=38  Identities=24%  Similarity=0.274  Sum_probs=32.7

Q ss_pred             cccCCcEEEEEcCchhHHHHHHHHHHCCCeEEEEeCCH
Q 009464          380 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  417 (534)
Q Consensus       380 ~~l~~k~vlVlGaGG~graia~~L~~~G~~v~i~~R~~  417 (534)
                      ..++||+++|+|+|-.|--.|..|++..-+|+++.|..
T Consensus        26 ~~~~gk~V~VvGgG~sA~~~A~~L~~~a~~V~li~r~~   63 (126)
T d1fl2a2          26 PLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP   63 (126)
T ss_dssp             GGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred             hhcCCceEEEEeCCHHHHHHHHhhhccCCceEEEeccc
Confidence            45789999999999999999999998866999998753