Citrus Sinensis ID: 009475
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 534 | 2.2.26 [Sep-21-2011] | |||||||
| Q12725 | 421 | Glucan 1,3-beta-glucosida | yes | no | 0.621 | 0.788 | 0.306 | 2e-39 | |
| Q7Z9L3 | 405 | Glucan 1,3-beta-glucosida | yes | no | 0.612 | 0.807 | 0.314 | 3e-39 | |
| B8N151 | 405 | Probable glucan 1,3-beta- | N/A | no | 0.612 | 0.807 | 0.314 | 3e-39 | |
| Q12700 | 425 | Glucan 1,3-beta-glucosida | N/A | no | 0.573 | 0.72 | 0.333 | 3e-39 | |
| B0XN12 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.612 | 0.786 | 0.340 | 2e-38 | |
| Q4WK60 | 416 | Probable glucan 1,3-beta- | yes | no | 0.612 | 0.786 | 0.340 | 2e-38 | |
| A1D4Q5 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.614 | 0.788 | 0.338 | 2e-37 | |
| A1CRV0 | 415 | Probable glucan 1,3-beta- | N/A | no | 0.705 | 0.908 | 0.320 | 5e-37 | |
| Q96V64 | 426 | Glucan 1,3-beta-glucosida | N/A | no | 0.569 | 0.713 | 0.331 | 1e-36 | |
| Q0CR35 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.582 | 0.747 | 0.338 | 2e-36 |
| >sp|Q12725|EXG_YARLI Glucan 1,3-beta-glucosidase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=EXG1 PE=3 SV=2 | Back alignment and function desciption |
|---|
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 178/359 (49%), Gaps = 27/359 (7%)
Query: 190 PSVFKL---NIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSN-GINAVR 245
PS+F+ N + EY T G ++A + L DHW+++IT+ D K ++ N +N VR
Sbjct: 54 PSLFEAFGNNDANVPVDEYHYTAWLGKEEAEKRLTDHWNTWITEYDIKAIAENYKLNLVR 113
Query: 246 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 305
IP+G+W A P P+V G LD A W KYGVK VD+H PGSQNG ++S RD
Sbjct: 114 IPIGYW-AFSLLPNDPYVQGQEAYLDRALGWCRKYGVKAWVDVHGVPGSQNGFDNSGLRD 172
Query: 306 GFQEWGDSNVADTVAVIDFLAARYANRPS---LAAIELINEPLAPGVALDTLKSYYKAGY 362
+ NV ++ VI+++A +Y + IEL+NEPL P + ++ ++ Y++ G+
Sbjct: 173 HWDWPNADNVQHSINVINYIAGKYGAPEYNDIVVGIELVNEPLGPAIGMEVIEKYFQEGF 232
Query: 363 DAVRKYTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI 421
VR S V++ + ++ ++ G VV+D H Y +FS N+ Q+I
Sbjct: 233 WTVRHAGSDTAVVIHDAFQEKNYFNNFMTTEQGFWNVVLDHHQYQVFSPGELARNIDQHI 292
Query: 422 DYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEW---TC 478
V N +G ++ G+ + C + L +F G + +C
Sbjct: 293 AEVCN-----VGRQASTEYHWRIFGEWSAALTDCTHWLNGVGKGPRLDGSFPGSYYQRSC 347
Query: 479 E-------WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+ W+ +D KQ+ +R+ AQLD + GW YW +K E A W + +++NG
Sbjct: 348 QGRGDIQTWSEQD--KQESRRYVEAQLDAWEHGGDGWIYWTYKTENALEWDFRRLVDNG 404
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 8 |
| >sp|Q7Z9L3|EXGA_ASPOR Glucan 1,3-beta-glucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=exgA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 173/356 (48%), Gaps = 29/356 (8%)
Query: 190 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 249
PS+F + E+ +T G ++A L HW S+++ DF+ ++ G+N VRIP+G
Sbjct: 48 PSIFDAAGAEAVD-EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIG 106
Query: 250 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309
+W A P P+V G + LD A +WA G+KV++DLH APGSQNG ++S R Q
Sbjct: 107 YW-ALGPLEGDPYVDGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRRGAIQW 165
Query: 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKY 368
V T+ D LA RY ++AAIE INEP P GV L+ YY + Y V KY
Sbjct: 166 QQGDTVEQTLDAFDLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNKY 225
Query: 369 TSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQR 428
+ V+ + P + F + S+VV+D H+Y++F N +++ +ID V
Sbjct: 226 NAGTSVVYGDGFLPVESWN--GFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQFA 283
Query: 429 ASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDAS-- 486
L A S+ P+ VG+ + C + + + + G + + + D S
Sbjct: 284 HQHLEA---SDKPV-IVGEWTGAVTDCAK----YLNGKGNGARYDGSYAADKAIGDCSSL 335
Query: 487 ------------KQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+ D +RF AQLD + + GW +W K E A W + ++E G
Sbjct: 336 ATGFVSKLSDEERSDMRRFIEAQLDAFELKS-GWVFWTWKTEGAPGWDMSDLLEAG 390
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|B8N151|EXGA_ASPFN Probable glucan 1,3-beta-glucosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 173/356 (48%), Gaps = 29/356 (8%)
Query: 190 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 249
PS+F + E+ +T G ++A L HW S+++ DF+ ++ G+N VRIP+G
Sbjct: 48 PSIFDAAGAEAVD-EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIG 106
Query: 250 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309
+W A P P+V G + LD A +WA G+KV++DLH APGSQNG ++S R Q
Sbjct: 107 YW-ALGPLEGDPYVDGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRRGAIQW 165
Query: 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKY 368
V T+ D LA RY ++AAIE INEP P GV L+ YY + Y V KY
Sbjct: 166 QQGDTVEQTLDAFDLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNKY 225
Query: 369 TSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQR 428
+ V+ + P + F + S+VV+D H+Y++F N +++ +ID V
Sbjct: 226 NAGTSVVYGDGFLPVESWN--GFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQFA 283
Query: 429 ASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDAS-- 486
L A S+ P+ VG+ + C + + + + G + + + D S
Sbjct: 284 HQHLEA---SDKPV-IVGEWTGAVTDCAK----YLNGKGNGARYDGSYAADKAIGDCSSL 335
Query: 487 ------------KQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+ D +RF AQLD + + GW +W K E A W + ++E G
Sbjct: 336 ATGFVSKLSDEERSDMRRFIEAQLDAFELKS-GWVFWTWKTEGAPGWDMSDLLEAG 390
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) (taxid: 332952) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q12700|EXG_SCHOC Glucan 1,3-beta-glucosidase OS=Schwanniomyces occidentalis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 170/351 (48%), Gaps = 45/351 (12%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY T G D A QVL+ HW ++ + DFK + G+NAVRIP+G+W A P+V
Sbjct: 78 EYHFTQKLGKDAAQQVLEQHWKTWYKENDFKMMLKYGLNAVRIPIGYW-AFKLLDYDPYV 136
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD--GFQEWGDSNVADTVAV 321
G K LD A DWA KY +KV +DLH APGSQNG ++S RD GFQ+ +NV T+ V
Sbjct: 137 QGQVKYLDRALDWARKYNLKVWIDLHGAPGSQNGFDNSGLRDSLGFQQ--GNNVNFTLEV 194
Query: 322 IDFLAARYAN---RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378
++ + +Y + IEL+NEPL P + L+ LK +++ GY +R S VI+ +
Sbjct: 195 LEIIGKKYGGPEYEDVVIGIELLNEPLGPSLDLNYLKEFFQQGYQNLRNSGSVQAVIIQD 254
Query: 379 RLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTS 438
P + + VV+D H+Y +FS +Q++ID + A + G
Sbjct: 255 AFQPMGYWDNFLTLDQYWNVVVDHHHYQVFSAG----ELQRSID-DHITVACNWGWDAKK 309
Query: 439 NGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEW--------------TCEWNVKD 484
G+ + C R WLN VG +C+ V
Sbjct: 310 EYHWNVAGEWSAALTDCAR-----------WLNGVGRGARFSGDFDNSPYFGSCDCYVNI 358
Query: 485 AS-----KQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
A+ + + +R+ AQLD + T GW +W KCE A W L+ +I G
Sbjct: 359 ATWPSEYRTNVRRYIEAQLDAF-EQTGGWFFWNWKCENAIEWDLQGLITAG 408
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Schwanniomyces occidentalis (taxid: 27300) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 178/355 (50%), Gaps = 28/355 (7%)
Query: 190 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 249
PS+F N E+ +T G D+A VL HW ++IT +DF+ ++ G+N VRIP+G
Sbjct: 59 PSIFD-NAGDAAVDEWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIG 117
Query: 250 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309
+W A P +P+V G + LDNA WA + G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 310 W--GDSNVADTVAVIDFLAARYANRPS-LAAIELINEPLAP-GVALDTLKSYYKAGYDAV 365
W GD+ V+ TV LA RY + + AIE +NEP P GV+ L+ YY D V
Sbjct: 176 WQQGDT-VSQTVDAFRALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVV 234
Query: 366 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVN 425
R+ V +S+ G + F +G VV+D H+Y +F N L++ ++
Sbjct: 235 RQIDPDTSVFLSD--GFLSTESWNGFKTG-EDVVMDTHHYEMFDNYLISLDIDGHV---- 287
Query: 426 NQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQ---IRIRKRNLWLNFVGEWTC---- 478
+ A D G + VG+ + C + + R + + N V C
Sbjct: 288 -KSACDFGKQIEGSDKPVVVGEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTT 346
Query: 479 EWNVKDASKQ---DYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+ +V D S Q D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 347 QGSVADLSDQERTDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q4WK60|EXGA_ASPFU Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 178/355 (50%), Gaps = 28/355 (7%)
Query: 190 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 249
PS+F N E+ +T G D+A VL HW ++IT +DF+ ++ G+N VRIP+G
Sbjct: 59 PSIFD-NAGDAAVDEWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIG 117
Query: 250 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309
+W A P +P+V G + LDNA WA + G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 310 W--GDSNVADTVAVIDFLAARYANRPS-LAAIELINEPLAP-GVALDTLKSYYKAGYDAV 365
W GD+ V+ TV LA RY + + AIE +NEP P GV+ L+ YY D V
Sbjct: 176 WQQGDT-VSQTVDAFRALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVV 234
Query: 366 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVN 425
R+ V +S+ G + F +G VV+D H+Y +F N L++ ++
Sbjct: 235 RQIDPGTSVFLSD--GFLSTESWNGFKTG-EDVVMDTHHYEMFDNYLISLDIDGHV---- 287
Query: 426 NQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQ---IRIRKRNLWLNFVGEWTC---- 478
+ A D G + VG+ + C + + R + + N V C
Sbjct: 288 -KSACDFGKQIEGSDKPVVVGEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTT 346
Query: 479 EWNVKDASKQ---DYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+ +V D S Q D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 347 QGSVADLSDQERTDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A1D4Q5|EXGA_NEOFI Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 172/354 (48%), Gaps = 26/354 (7%)
Query: 190 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 249
PS+F N E+ +T G D+A VL HW ++IT DF ++ G+N VRIP+G
Sbjct: 59 PSIFD-NAGDAAVDEWTLTATLGQDQAKAVLSQHWSTFITQGDFHRIAQAGMNHVRIPIG 117
Query: 250 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309
+W A P +P+V G + LDNA WA G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWARDAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 310 WGDSN-VADTVAVIDFLAARYANRPS-LAAIELINEPLAP-GVALDTLKSYYKAGYDAVR 366
W N V+ TV LA RY + +AAIE +NEP P GV+ L+ YY D VR
Sbjct: 176 WQQGNTVSQTVDAFRALAERYLPQSDVVAAIEALNEPNIPGGVSEAGLRDYYDQIADVVR 235
Query: 367 KYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN 426
+ V +S+ G F +G VV+D H+Y +F N L++ ++
Sbjct: 236 QINPDTSVFLSD--GFLSTASWNGFKTG-EDVVMDTHHYEMFDNYLISLDIHGHV----- 287
Query: 427 QRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQ---IRIRKRNLWLNFVGEWTC----E 479
+ A D G + VG+ + C + + R + + N C +
Sbjct: 288 KSACDFGKQIKGSDKPVVVGEWSGAVTDCTKYLNGKGVPTRYQGEYANNPKYGDCGDKTQ 347
Query: 480 WNVKDASKQ---DYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+V D S Q D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 348 GSVADLSDQERADTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A1CRV0|EXGA_ASPCL Probable glucan 1,3-beta-glucosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=exgA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 192/418 (45%), Gaps = 41/418 (9%)
Query: 133 LVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS----SSWDDS 188
L +S TA + + V + SR+R+ + + Q SE + G W
Sbjct: 2 LSRLSQTALVALSLMTVLTEAVPSRMRIQTRDSVNYQ--SEIVRGVNLGGWLVLEPW--I 57
Query: 189 DPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPV 248
PS+F+ N E+ + G DKA +L HW S+IT +DF ++ G+N VRIPV
Sbjct: 58 TPSIFE-NGGGAAVDEWTLAEVLGKDKARAILSQHWSSFITQDDFNQIAQAGMNHVRIPV 116
Query: 249 GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 308
G+W + P +P+V G + LDNA WA G+KV++DLH APGSQNG ++S R G
Sbjct: 117 GYWAVS--APDEPYVDGQLEFLDNAISWARAAGLKVMIDLHGAPGSQNGFDNSG-RKGPI 173
Query: 309 EW--GDSNVADTVAVIDFLAARYANRPS-LAAIELINEPLAP-GVALDTLKSYYKAGYDA 364
W GD+ VA TV LA RY + AIE +NEP P GV LK YY +
Sbjct: 174 AWQQGDT-VARTVDAFKALAERYLPESDVVTAIEAVNEPNIPGGVNEGQLKEYYNQVLEV 232
Query: 365 VRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI--- 421
V A V +S+ G +A+G VV+D H+Y++F N L++ ++
Sbjct: 233 VHSINPDAGVFLSD--GFLATASWNGYANG-ENVVMDTHHYHMFDNTLISLDINAHVRAA 289
Query: 422 -DYVNNQRASDLGAVTTS-NGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTC- 478
++ N + SD V G LT K + I R W N C
Sbjct: 290 CEFGNQIKGSDKPVVVGEWTGALTDCTKHLNG-------KDIPTRYEGQWANSPRYGDCG 342
Query: 479 ------EWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+ + + D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 343 NKRQGSSSGLSEQERSDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 399
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q96V64|EXG_BLUGR Glucan 1,3-beta-glucosidase OS=Blumeria graminis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 170/359 (47%), Gaps = 55/359 (15%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY T G D+A L +HW ++IT+EDF ++S G+N VRIP+G+W A P P+V
Sbjct: 69 EYSYTAALGKDEAFTRLNNHWATWITEEDFAEIASMGLNHVRIPIGYW-ALVAIPNDPYV 127
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW--GDSNVADTVAV 321
G +D A DWA K G+KV++DLH APGSQNG ++S R G W GD NV +T+
Sbjct: 128 QGQLSYVDRAIDWARKNGLKVMLDLHGAPGSQNGFDNSG-RTGTIAWQSGD-NVPNTLRA 185
Query: 322 IDFLAARYANRPS-LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 380
I LA RYA + + AIEL+NEP G L +K +Y G+ VR TA I L
Sbjct: 186 IQALAERYAPQTDVVTAIELLNEPANWGNDLSQIKKFYYDGWGNVRTQGQTAVTIHDAFL 245
Query: 381 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGL----NVQQNIDYVNNQRASDLGAVT 436
P ++ +G++ V++D H Y +FS N + +VQ ++ + +D
Sbjct: 246 DPRSWNGFMNSEAGVNNVILDTHIYQVFSQNEVAMKPCAHVQTACSSIDKIKPTD----- 300
Query: 437 TSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGE----------------WTCEW 480
T VG+ + C + WLN +G+ +C+
Sbjct: 301 ----KWTIVGEWTGAQTDCAK-----------WLNGLGKGARYDGTLPGHSEGYYGSCDK 345
Query: 481 NVK-------DASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 531
+ K + Q F AQLD Y T GW +W K E A W + + G I
Sbjct: 346 KYEGTVDSMLPVDKTNLQYFVEAQLDAYESHT-GWFFWTWKTESAPEWHFQNLTRAGLI 403
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Blumeria graminis (taxid: 34373) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q0CR35|EXGA_ASPTN Probable glucan 1,3-beta-glucosidase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 172/346 (49%), Gaps = 35/346 (10%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
E+ T G D+A L HWD++IT++DF +++ G+N VRIP+G+W A + P P+V
Sbjct: 70 EWTYTEILGQDEAKARLIGHWDTFITEQDFFDIAAAGMNHVRIPIGYW-AVEALPGDPYV 128
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN-VADTVAVI 322
G + LD A +WA G+KVIVDLH APGSQNG ++S R G +WG + + TV
Sbjct: 129 DGQLEYLDRAIEWAGAAGLKVIVDLHGAPGSQNGFDNSG-RKGAIQWGQGDTLGQTVNAF 187
Query: 323 DFLAARYANRPS---LAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378
LA RY PS + AIE +NEP P GV D LK YY+ YD V + + ++ S+
Sbjct: 188 RKLAERYV--PSSDVVTAIEAVNEPFIPGGVNEDQLKEYYQQAYDIVTQMSPDVDLVFSD 245
Query: 379 RLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTS 438
G + F S +V+D H+Y +F N ++V ++ V + + L T
Sbjct: 246 --GFINPTPWNGFISDSGNIVMDNHHYEVFDINLLRMSVDDHVRSVCDFGRTQLAPATKP 303
Query: 439 NGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCE----------WNVKDASKQ 488
VG+ + C R + R + + G E +V D S
Sbjct: 304 ----VVVGEWTGAMTDCAR----YLNGRGVGARYDGAMGGESVGDCGPFIQGSVSDLSPD 355
Query: 489 D---YQRFANAQLDVYGRATFGWAYWAHKCE--ANHWSLKWMIENG 529
D +RF AQLD + + GW +W K E A W +K +++NG
Sbjct: 356 DQKNMRRFIEAQLDAWEMKS-GWLFWNWKTEQGAPGWDMKDLLDNG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 534 | ||||||
| 359497371 | 529 | PREDICTED: probable glucan 1,3-beta-gluc | 0.945 | 0.954 | 0.704 | 0.0 | |
| 296086866 | 537 | unnamed protein product [Vitis vinifera] | 0.934 | 0.929 | 0.703 | 0.0 | |
| 296086868 | 486 | unnamed protein product [Vitis vinifera] | 0.908 | 0.997 | 0.706 | 0.0 | |
| 147795863 | 610 | hypothetical protein VITISV_000586 [Viti | 0.882 | 0.772 | 0.703 | 0.0 | |
| 224093776 | 455 | predicted protein [Populus trichocarpa] | 0.846 | 0.993 | 0.690 | 0.0 | |
| 356511109 | 503 | PREDICTED: probable glucan 1,3-beta-gluc | 0.925 | 0.982 | 0.643 | 0.0 | |
| 224081170 | 481 | predicted protein [Populus trichocarpa] | 0.872 | 0.968 | 0.669 | 0.0 | |
| 356525499 | 502 | PREDICTED: probable glucan 1,3-beta-gluc | 0.925 | 0.984 | 0.637 | 0.0 | |
| 357455947 | 497 | Glucan 1,3-beta-glucosidase [Medicago tr | 0.928 | 0.997 | 0.632 | 0.0 | |
| 388491144 | 497 | unknown [Medicago truncatula] | 0.928 | 0.997 | 0.631 | 0.0 |
| >gi|359497371|ref|XP_003635494.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Vitis vinifera] gi|296080899|emb|CBI18831.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/535 (70%), Positives = 434/535 (81%), Gaps = 30/535 (5%)
Query: 1 MAYDSYANVVSSLFLFSC-VISLSLAQNADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPN 59
M+ SY V + +LFS V +L AQ AD LP++AVNLGNWLVTEGWMKPS F IPN
Sbjct: 1 MSSYSYVKCVWAFYLFSSWVPTLWFAQGADPYLPVKAVNLGNWLVTEGWMKPSLFSGIPN 60
Query: 60 KDLLDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNK 119
+DLLDGTQVQFMSTK QKY++AE+GGGT VVANRTS+SGWETFRLWR+NE+ +N RV NK
Sbjct: 61 QDLLDGTQVQFMSTKLQKYLSAENGGGTDVVANRTSSSGWETFRLWRINESTFNLRVFNK 120
Query: 120 QFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTAD 179
QF GLENQG+GN +VAV N+ G SETFQIVRK+ D +RVR+ ASNG+F+QA +TAD
Sbjct: 121 QFFGLENQGKGNKVVAVLNSPGNSETFQIVRKNDDRNRVRIKASNGLFLQA-KPGLVTAD 179
Query: 180 YGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSN 239
YG S WDD++PSVF + IV TL+GEYQITNG+GPD+APQV+QDHW++YIT+EDF+FLSSN
Sbjct: 180 YGGSGWDDNNPSVFHMKIVRTLQGEYQITNGYGPDRAPQVMQDHWNAYITNEDFRFLSSN 239
Query: 240 GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299
G+NAVRIPVGWWIA+DPTPPKPFVGGS K LDNAF WA+ G+K+IVDLHA GSQNGN+
Sbjct: 240 GLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKIIVDLHAVQGSQNGND 299
Query: 300 HSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYK 359
HS TRDGFQEWGDSN+ DTVAVIDFLAARYAN PSLAAIEL+NEPLAPGV L+ LK YYK
Sbjct: 300 HSGTRDGFQEWGDSNIQDTVAVIDFLAARYANNPSLAAIELMNEPLAPGVTLNDLKKYYK 359
Query: 360 AGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ 419
AGYDAVRKYTS AYVI+SNRLGPAD KELL FA L+RVVIDVHYY+LFS+ FN +NVQQ
Sbjct: 360 AGYDAVRKYTSNAYVILSNRLGPADSKELLDFARSLNRVVIDVHYYSLFSDMFNNMNVQQ 419
Query: 420 NIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCE 479
NID++ NQRASDL AVTTSNGPL+ FVGEWT E
Sbjct: 420 NIDFIYNQRASDLSAVTTSNGPLS----------------------------FVGEWTAE 451
Query: 480 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKLV 534
W A K+DYQRFA AQ+DVYGRATFGWAYWA++C NHWSL+WMIENGYI L+
Sbjct: 452 WAKSGAPKEDYQRFAKAQIDVYGRATFGWAYWAYRCAQNHWSLEWMIENGYINLL 506
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086866|emb|CBI33033.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/529 (70%), Positives = 430/529 (81%), Gaps = 30/529 (5%)
Query: 6 YANVVSSLFLFSC-VISLSLAQNADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPNKDLLD 64
Y V + +LFS V +L AQ AD LP++AVNLGNWLVTEGWMKP F IPN+DLLD
Sbjct: 6 YVKCVWAFYLFSSWVPTLLFAQGADPYLPVKAVNLGNWLVTEGWMKPELFAGIPNQDLLD 65
Query: 65 GTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGL 124
GTQVQFMSTK QKY+AAE+GGGT VVANRTS SGWETFRLWR+N++ +N RV NKQF GL
Sbjct: 66 GTQVQFMSTKLQKYLAAENGGGTDVVANRTSPSGWETFRLWRINKSTFNLRVFNKQFFGL 125
Query: 125 ENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSS 184
ENQG+GN +V+V N+ G SETFQIVRK+ D +RVR+ ASNG+F+QA +TADYG S
Sbjct: 126 ENQGKGNKVVSVLNSPGNSETFQIVRKNDDQNRVRIKASNGLFLQA-KPGLVTADYGGSG 184
Query: 185 WDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAV 244
WDD++PSVF++ IV TL+GEYQITNG+GPD+APQV+QDHW++YIT+EDF+FLSSNG+NAV
Sbjct: 185 WDDNNPSVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWNAYITNEDFRFLSSNGLNAV 244
Query: 245 RIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATR 304
RIPVGWWIA+DPTPPKPFVGGS K LDNAF WA+ G+K+IVDLHA GSQNGN+HS TR
Sbjct: 245 RIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKIIVDLHAVQGSQNGNDHSGTR 304
Query: 305 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDA 364
DGFQEWGDSN+ DTVAVIDFLAARYAN PSLA+IEL+NEPLAPGV L+ LK YYKAGYDA
Sbjct: 305 DGFQEWGDSNIQDTVAVIDFLAARYANNPSLASIELMNEPLAPGVTLNDLKKYYKAGYDA 364
Query: 365 VRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYV 424
VRKYTS AYVI+SNRLGPAD KELL FA GL+RVVIDVHYY+LFS+ FN +NVQQNID++
Sbjct: 365 VRKYTSNAYVILSNRLGPADSKELLDFARGLNRVVIDVHYYSLFSDMFNNMNVQQNIDFI 424
Query: 425 NNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKD 484
+QRASDL AVTTSNGPL+ FVGEWT EW
Sbjct: 425 YSQRASDLSAVTTSNGPLS----------------------------FVGEWTAEWAKSG 456
Query: 485 ASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 533
ASK+DYQRFA AQ+DVY RATFGWAYWA++C NHWSLKWMIENG+I L
Sbjct: 457 ASKKDYQRFAKAQIDVYRRATFGWAYWAYRCAQNHWSLKWMIENGHINL 505
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086868|emb|CBI33035.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/515 (70%), Positives = 420/515 (81%), Gaps = 30/515 (5%)
Query: 1 MAYDSYANVVSSLFLFS-CVISLSLAQNADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPN 59
M+ SY + + +LFS CV +L AQ AD LP++AVNLGNWLVTEGWMKPS F IPN
Sbjct: 1 MSSYSYVKCMWAFYLFSSCVPTLWFAQGADPYLPVKAVNLGNWLVTEGWMKPSLFAGIPN 60
Query: 60 KDLLDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNK 119
+DLLDGTQVQFMSTK QKY++AE+GGGT VVANRTS SGWETFRLWR+NE+ +N RV NK
Sbjct: 61 QDLLDGTQVQFMSTKLQKYLSAENGGGTDVVANRTSPSGWETFRLWRINESTFNLRVFNK 120
Query: 120 QFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTAD 179
QF GLENQG+GN +VAV N+ G SETFQIVRK+ D +RVR+ ASNG+F+QA +TAD
Sbjct: 121 QFFGLENQGKGNKVVAVLNSPGNSETFQIVRKNDDRNRVRIKASNGLFLQA-KPGLVTAD 179
Query: 180 YGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSN 239
YG S WDD++PSVF++ IV TL+GEYQITNG+GPD+APQV+QDHW++YIT+EDF+FLSSN
Sbjct: 180 YGGSGWDDNNPSVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWNAYITNEDFRFLSSN 239
Query: 240 GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299
G+NAVRIPVGWWIA+DPTPPKPFVGGS K LDNAF WA+ G+K+IVDLHA GSQNGN+
Sbjct: 240 GLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKIIVDLHAVQGSQNGND 299
Query: 300 HSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYK 359
HS TRDGFQEWGDSN+ DTVAVIDFLAARYAN PSLAAIEL+NEPLAPGV L+ LK YYK
Sbjct: 300 HSGTRDGFQEWGDSNIQDTVAVIDFLAARYANNPSLAAIELMNEPLAPGVTLNDLKKYYK 359
Query: 360 AGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ 419
AGYDAVRKYTS AYVI+SNRLGPAD KELL FA GL+RVVIDVHYY+LFS+ FN +NVQQ
Sbjct: 360 AGYDAVRKYTSNAYVILSNRLGPADSKELLDFARGLNRVVIDVHYYSLFSDMFNNMNVQQ 419
Query: 420 NIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCE 479
NID++ NQRASDL AVTTSNGPL+ FVGEWT E
Sbjct: 420 NIDFIYNQRASDLSAVTTSNGPLS----------------------------FVGEWTAE 451
Query: 480 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 514
W ASK+DYQRFA AQ+DVYGRATFGWAYWA++
Sbjct: 452 WAKSGASKEDYQRFAKAQIDVYGRATFGWAYWAYR 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147795863|emb|CAN74231.1| hypothetical protein VITISV_000586 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/506 (70%), Positives = 410/506 (81%), Gaps = 35/506 (6%)
Query: 28 ADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPNKDLLDGTQVQFMSTKFQKYIAAESGGGT 87
AD LP++AVNLGNWLVTEGWMKP F IPN+DLLDGTQVQFMSTK QKY+AAE+GGGT
Sbjct: 137 ADPYLPVKAVNLGNWLVTEGWMKPELFAGIPNQDLLDGTQVQFMSTKLQKYLAAENGGGT 196
Query: 88 IVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQ 147
VVANRTS SGWETFRLWR+N++ +N RV NKQF GLENQG+GN +V+V N+ G SETFQ
Sbjct: 197 DVVANRTSPSGWETFRLWRINKSTFNLRVFNKQFFGLENQGKGNKVVSVLNSPGNSETFQ 256
Query: 148 IVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQI 207
IVRK+ D +RVR+ ASNG+F+QA +TADYG S WD ++PSVF++ IV TL+GEYQI
Sbjct: 257 IVRKNDDQNRVRIKASNGLFLQA-KPGLVTADYGGSGWDXNNPSVFQMKIVRTLQGEYQI 315
Query: 208 TNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS 267
TNG+GPD+APQV+QDHW++YI +EDF+FLSSNG+NAVRIPVGWWIA+DPTPPKPFVGGS
Sbjct: 316 TNGYGPDRAPQVMQDHWNAYIXNEDFRFLSSNGLNAVRIPVGWWIASDPTPPKPFVGGSL 375
Query: 268 KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 327
K LDNAF WA+ G+K+IVDLHA GSQNGN+HS TRDGFQEWGDSN+ DTVAVIDFLAA
Sbjct: 376 KALDNAFTWAQNNGMKIIVDLHAVQGSQNGNDHSGTRDGFQEWGDSNIQDTVAVIDFLAA 435
Query: 328 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKE 387
SLA IEL+NEPLAPGV L+ LK YYKAGYDAVRKYTS AYVI+SNRLGPAD KE
Sbjct: 436 ------SLAXIELMNEPLAPGVTLNDLKKYYKAGYDAVRKYTSNAYVILSNRLGPADSKE 489
Query: 388 LLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGK 447
LL FA GL+RVVIDVHYY+LFS+ FN +NVQQNID++ +QRASDL AVTTSNGPL+
Sbjct: 490 LLDFARGLNRVVIDVHYYSLFSDMFNNMNVQQNIDFIYSQRASDLSAVTTSNGPLS---- 545
Query: 448 SVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFG 507
FVGEWT EW ASK+DYQRFA AQ+DVY RATFG
Sbjct: 546 ------------------------FVGEWTAEWAKSGASKKDYQRFAKAQIDVYRRATFG 581
Query: 508 WAYWAHKCEANHWSLKWMIENGYIKL 533
WAYWA++C NHWSLKWMIENG+I L
Sbjct: 582 WAYWAYRCAQNHWSLKWMIENGHINL 607
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224093776|ref|XP_002309987.1| predicted protein [Populus trichocarpa] gi|222852890|gb|EEE90437.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/488 (69%), Positives = 397/488 (81%), Gaps = 36/488 (7%)
Query: 49 MKPSRFDDIPNKDLLDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVN 108
MKPS +D +PN DLLDG QVQF+STK QKY+++E+GGGT++VANR SASGWETFRLWR+N
Sbjct: 1 MKPSLYDGMPNNDLLDGAQVQFLSTKLQKYLSSENGGGTVLVANRPSASGWETFRLWRIN 60
Query: 109 ETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFI 168
ET++NFRV NKQF+GLE+QG + + AVS+T G S+TFQI+R + D +RVRL ASNG FI
Sbjct: 61 ETYFNFRVFNKQFVGLEDQG--DKVTAVSDTVGNSQTFQIIRNNDDRNRVRLQASNGQFI 118
Query: 169 QAISETRLTADYGSSSWDDSDPSVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHWDS 226
QA SET +TADY S W+DSDPSVFK+ IV+ + RGEYQ+TNG+GPD+APQVLQDHW+S
Sbjct: 119 QASSETLVTADYVGSGWEDSDPSVFKMTIVNIYSFRGEYQLTNGYGPDRAPQVLQDHWNS 178
Query: 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV 286
YIT+EDF+F+S N +NAVRIPVGWWIA+DPTPPKPFVGGS K LDNAF WA+KYG+KVIV
Sbjct: 179 YITEEDFRFMSENSLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQKYGMKVIV 238
Query: 287 DLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLA-ARYANRPSLAAIELINEPL 345
DLHA SQNGN+HSATRDG+QEWG+SN+ +TVAVIDFLA +RYA++PSLAAIEL+NEP+
Sbjct: 239 DLHAVQASQNGNDHSATRDGYQEWGESNIQETVAVIDFLAESRYADKPSLAAIELMNEPM 298
Query: 346 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYY 405
APGV LDTL YY+AGYDAVRK++ AYVI+SNRLGPAD KELLSFASGL RVVIDVHYY
Sbjct: 299 APGVNLDTLIKYYQAGYDAVRKHSENAYVILSNRLGPADSKELLSFASGLKRVVIDVHYY 358
Query: 406 NLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRK 465
NLFS++FN +N QQNIDY+ NQRAS L VTT+NGPL
Sbjct: 359 NLFSDSFNNMNPQQNIDYIYNQRASALTTVTTTNGPLR---------------------- 396
Query: 466 RNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWM 525
EWT +W V+ AS QDYQ FA AQLDVYGRATFGWAYWA+KC +HWSLKWM
Sbjct: 397 ---------EWTGDWAVQGASMQDYQNFAKAQLDVYGRATFGWAYWAYKCAGDHWSLKWM 447
Query: 526 IENGYIKL 533
IEN YIKL
Sbjct: 448 IENNYIKL 455
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356511109|ref|XP_003524272.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/530 (64%), Positives = 412/530 (77%), Gaps = 36/530 (6%)
Query: 6 YANVVSSLFLFSCVISLSLAQNADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPNKDLLDG 65
YAN+V + +L SC +LAQ + LPL+AVNLGNWLV EGWMKPS FD I NKDLLDG
Sbjct: 8 YANLVLAFYL-SC--HYALAQTENFPLPLKAVNLGNWLVIEGWMKPSLFDGITNKDLLDG 64
Query: 66 TQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLE 125
TQVQFMSTK QKY+ AE GGG++VVANRT ASGWETFRLWR+NE+ +NFRV+NKQFI L
Sbjct: 65 TQVQFMSTKLQKYLCAEHGGGSVVVANRTKASGWETFRLWRINESTFNFRVSNKQFIRLT 124
Query: 126 NQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSW 185
N+ G+ LVA S++ ETF+I+R D D +RVR+ A NG F+QAISET + A+Y SSW
Sbjct: 125 NRDGGSNLVADSDSPSDLETFEILRNDDDPNRVRIRAPNGQFLQAISETVVLANYEGSSW 184
Query: 186 DDSDPSVFKLNIV--STLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINA 243
DDSDPS+FK+N++ S +RGEYQITNG+ PDKA ++++DHW++YI ++DFKF+S NG+NA
Sbjct: 185 DDSDPSIFKMNVLSGSIIRGEYQITNGYSPDKATKIMRDHWNTYIIEDDFKFMSENGLNA 244
Query: 244 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 303
VRIPVGWW DPTPPKPFVGGS +VLDNAF WAEKYG+KVIVDLHAAPGSQNG HSA+
Sbjct: 245 VRIPVGWWTTQDPTPPKPFVGGSLEVLDNAFTWAEKYGIKVIVDLHAAPGSQNGRPHSAS 304
Query: 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYD 363
RDG+ EWGDS ++DTVA IDFLA RY+NR L AIEL+NEP GV L++LKSYY+AGYD
Sbjct: 305 RDGYLEWGDSYISDTVATIDFLAERYSNRSGLVAIELMNEP--QGVNLESLKSYYQAGYD 362
Query: 364 AVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDY 423
AVRK+TS+AYVIMSN L D K LLSFA SRVVIDVHYYNLFS+ F+ +NVQQNID+
Sbjct: 363 AVRKHTSSAYVIMSNPLD-RDSKVLLSFAGAFSRVVIDVHYYNLFSDRFSNMNVQQNIDF 421
Query: 424 VNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVK 483
+ NQRASDL ++TTSNGPL FVGEW+ +W V+
Sbjct: 422 IKNQRASDLSSLTTSNGPLI----------------------------FVGEWSSDWKVQ 453
Query: 484 DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 533
ASK+D+Q+F Q+DVY RA FGWAYWA+ C++N WS+KWMIEN YIKL
Sbjct: 454 SASKKDHQKFTQVQVDVYSRAKFGWAYWAYICDSNFWSIKWMIENNYIKL 503
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224081170|ref|XP_002306319.1| predicted protein [Populus trichocarpa] gi|222855768|gb|EEE93315.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/512 (66%), Positives = 399/512 (77%), Gaps = 46/512 (8%)
Query: 35 RAVNLGNWLVTEGWMKPSRFDDIPNKDLLDGTQVQFMSTKFQKYIAAESGGGTIVVANRT 94
+AVNLGNWLV EGWM PS +D +PN DLLDGTQV+F ST+ QKY+ +E+GGGTI+VANR
Sbjct: 1 KAVNLGNWLVNEGWMDPSLYDGMPNNDLLDGTQVRFFSTRLQKYLCSENGGGTILVANRP 60
Query: 95 SASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGD 154
SAS WETFRLWR+NET++NFRV NKQF+GLE+QG N + A S+TAG ETFQI+RK+ D
Sbjct: 61 SASDWETFRLWRINETYFNFRVFNKQFVGLEDQG--NKVTAFSDTAGNRETFQIIRKNDD 118
Query: 155 SSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVS--TLRGEYQITNGFG 212
S VRL ASNG F+QAISET +TADY S WDD DPSVFK+ IV+ +RGEYQ+TNG+G
Sbjct: 119 RSIVRLQASNGQFLQAISETLVTADYVGSGWDDGDPSVFKMTIVNPNAIRGEYQLTNGYG 178
Query: 213 PDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDN 272
D+APQVLQDHW+SYITDEDF+F+S+NG+NAVRIPVGWWIA DP PPKPFV GS K LDN
Sbjct: 179 TDRAPQVLQDHWNSYITDEDFRFMSANGLNAVRIPVGWWIACDP-PPKPFVSGSLKALDN 237
Query: 273 AFDWAE-------------KYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTV 319
AF WA+ +YG+KVIVDLHA GSQNGN HS TRDG+QEWGDSN+ DTV
Sbjct: 238 AFTWAQCYKYSDDGLRIYMEYGMKVIVDLHAIQGSQNGNGHSGTRDGYQEWGDSNIQDTV 297
Query: 320 AVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 379
AVIDFLA RYAN SLAAIEL+NEP+APG++LDTLK YY+AGYDAVRKYT AYVI+SNR
Sbjct: 298 AVIDFLAERYANNTSLAAIELMNEPMAPGISLDTLKKYYQAGYDAVRKYTQNAYVILSNR 357
Query: 380 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 439
LG AD KELLSFAS L V IDVHYYNLFS++F+ +N QQNID+++NQR+SDL VTT+N
Sbjct: 358 LGNADAKELLSFASSLHCVAIDVHYYNLFSDSFSNMNAQQNIDFIHNQRSSDLDTVTTAN 417
Query: 440 GPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLD 499
GP FVGEWT EW V AS +DYQ FA AQ++
Sbjct: 418 GPSI----------------------------FVGEWTGEWEVNGASMEDYQNFAKAQIE 449
Query: 500 VYGRATFGWAYWAHKCEANHWSLKWMIENGYI 531
VYGRA FGWAYWA+KC AN+WSLKWMIEN YI
Sbjct: 450 VYGRAQFGWAYWAYKCAANYWSLKWMIENNYI 481
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525499|ref|XP_003531362.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/530 (63%), Positives = 404/530 (76%), Gaps = 36/530 (6%)
Query: 6 YANVVSSLFLFSCVISLSLAQNADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPNKDLLDG 65
YAN+V + +L SC +LAQ + LPL+AVNLGNW V EGWMKPS FD I NKDLLDG
Sbjct: 7 YANLVLAFYL-SC--HYALAQTENFPLPLKAVNLGNWFVIEGWMKPSLFDGITNKDLLDG 63
Query: 66 TQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLE 125
TQVQFMSTK QKY+ AE GGG++VVANRT A GWETFRLWRVNE+ +NFRV++KQFI L
Sbjct: 64 TQVQFMSTKLQKYLCAEHGGGSVVVANRTKALGWETFRLWRVNESTFNFRVSSKQFIRLT 123
Query: 126 NQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSW 185
NQ G+ LVA S++ ETF+I+R D D + VR+ A NG F+QAISE + A+Y SSW
Sbjct: 124 NQNGGSNLVADSDSPSDMETFEILRSDDDPNMVRIRAPNGQFLQAISENVVLANYEGSSW 183
Query: 186 DDSDPSVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINA 243
DDSDPSVFK+N++S +RGEYQITNG+GPDKA ++++DHW++YIT++DFKF+S NG+NA
Sbjct: 184 DDSDPSVFKMNVLSGSIIRGEYQITNGYGPDKASKIMRDHWNTYITEDDFKFMSENGLNA 243
Query: 244 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 303
VRIPVGWW DPTPPKPFVGGS +VLDNAF WAEKYG+KVIVDLHAAPGSQNG HSA+
Sbjct: 244 VRIPVGWWTTLDPTPPKPFVGGSLEVLDNAFTWAEKYGIKVIVDLHAAPGSQNGRPHSAS 303
Query: 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYD 363
RDG+ EW DS ++DTVA IDFLA RYAN L AIEL+NEP GV L++LKSYY+AGYD
Sbjct: 304 RDGYLEWDDSYISDTVAAIDFLAERYANSSGLVAIELMNEP--QGVNLESLKSYYQAGYD 361
Query: 364 AVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDY 423
AVRK+TS+AYVIMSN L D K LLSFA S VVIDVHYYNLFS+ F+ +NVQQNID+
Sbjct: 362 AVRKHTSSAYVIMSNPLD-RDSKVLLSFAGAFSGVVIDVHYYNLFSDRFSNMNVQQNIDF 420
Query: 424 VNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVK 483
+ QR SDL ++TTSNGPL FVGEW+ +W V+
Sbjct: 421 IKKQRVSDLSSLTTSNGPLI----------------------------FVGEWSSDWKVQ 452
Query: 484 DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 533
ASK D Q+F Q+DVY RA FGWAYWA+KC++N WS+KWMIEN YIKL
Sbjct: 453 SASKIDQQKFTQVQVDVYSRAKFGWAYWAYKCDSNFWSIKWMIENNYIKL 502
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455947|ref|XP_003598254.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|355487302|gb|AES68505.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/534 (63%), Positives = 400/534 (74%), Gaps = 38/534 (7%)
Query: 1 MAYDSYANVVSSLFLFSCVISLSLAQNADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPNK 60
M Y +Y SC S LAQN P +AVNLGNWL+ EGWMKPS F+ I NK
Sbjct: 1 MEYRNYYLSFLLALFLSCPYSSLLAQNP----PYKAVNLGNWLLAEGWMKPSLFEGIVNK 56
Query: 61 DLLDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQ 120
DLLDGTQVQ MSTKFQKY+AA++GGG +VANR SASGWETF LWRVN+T++NFRV NKQ
Sbjct: 57 DLLDGTQVQLMSTKFQKYLAADNGGGAGIVANRDSASGWETFPLWRVNDTYFNFRVFNKQ 116
Query: 121 FIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADY 180
F+G+ NQG N +VAVSN+ ETFQI+R GD ++R+ ASNG++ Q SET +TADY
Sbjct: 117 FMGINNQGD-NKIVAVSNSPSNQETFQIIRNSGDPLKIRIKASNGLYWQVRSETLVTADY 175
Query: 181 GS-SSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSN 239
G +SW++SDPSVF++ IV TL GEYQ+TNG+GPDKAPQVL+DHW+SYIT++DF F+S N
Sbjct: 176 GQGTSWEESDPSVFRMKIVRTLEGEYQLTNGYGPDKAPQVLRDHWNSYITEDDFTFMSQN 235
Query: 240 GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299
G+NAVRIPVGWWIA DP PPKPFVGGS LDNAF WA+ +G+KVIVDLHA GSQNGN+
Sbjct: 236 GLNAVRIPVGWWIAQDPNPPKPFVGGSLAALDNAFTWAQIHGMKVIVDLHAVEGSQNGND 295
Query: 300 HSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYK 359
HS TRDGF EWG+S + TV+VIDFLA RY NRPSL IEL+NEP GV LD+LK YYK
Sbjct: 296 HSGTRDGFIEWGESYIPQTVSVIDFLAKRYGNRPSLGGIELMNEP--QGVNLDSLKKYYK 353
Query: 360 AGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ 419
YDAVRKY AYVIMSN L AD K LLSF +G ++VV+DVHYYNL+S+ F +NVQQ
Sbjct: 354 EAYDAVRKYNPNAYVIMSNPLD-ADSKVLLSFVTGFNKVVLDVHYYNLYSDKFTNMNVQQ 412
Query: 420 NIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCE 479
NIDY+NN+RASDL V+++N L+FVGEWT E
Sbjct: 413 NIDYINNERASDLSGVSSTNA-----------------------------LSFVGEWTDE 443
Query: 480 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 533
+ V+ AS QDYQR+ AQLDVY RATFGWAYWA+KC+ NHWSLKWMIENGYIKL
Sbjct: 444 FLVQGASMQDYQRYGQAQLDVYSRATFGWAYWAYKCQYNHWSLKWMIENGYIKL 497
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388491144|gb|AFK33638.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/534 (63%), Positives = 400/534 (74%), Gaps = 38/534 (7%)
Query: 1 MAYDSYANVVSSLFLFSCVISLSLAQNADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPNK 60
M Y +Y SC S LAQN P +AVNLGNWL+ EGWMKPS F+ I NK
Sbjct: 1 MEYRNYYLSFLLALFLSCPYSSLLAQNP----PYKAVNLGNWLLAEGWMKPSLFEGIVNK 56
Query: 61 DLLDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQ 120
DLLDGTQVQ +STKFQKY+AA++GGG +VANR SASGWETF LWRVN+T++NFRV NKQ
Sbjct: 57 DLLDGTQVQLVSTKFQKYLAADNGGGAGIVANRDSASGWETFPLWRVNDTYFNFRVFNKQ 116
Query: 121 FIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADY 180
F+G+ NQG N +VAVSN+ ETFQI+R GD ++R+ ASNG++ Q SET +TADY
Sbjct: 117 FMGINNQGD-NKIVAVSNSPSNQETFQIIRNSGDPLKIRIKASNGLYWQVRSETLVTADY 175
Query: 181 GS-SSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSN 239
G +SW++SDPSVF++ IV TL GEYQ+TNG+GPDKAPQVL+DHW+SYIT++DF F+S N
Sbjct: 176 GQGTSWEESDPSVFRMKIVRTLEGEYQLTNGYGPDKAPQVLRDHWNSYITEDDFTFMSQN 235
Query: 240 GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299
G+NAVRIPVGWWIA DP PPKPFVGGS LDNAF WA+ +G+KVIVDLHA GSQNGN+
Sbjct: 236 GLNAVRIPVGWWIAQDPNPPKPFVGGSLAALDNAFTWAQIHGMKVIVDLHAVEGSQNGND 295
Query: 300 HSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYK 359
HS TRDGF EWG+S + TV+VIDFLA RY NRPSL IEL+NEP GV LD+LK YYK
Sbjct: 296 HSGTRDGFIEWGESYIPQTVSVIDFLAKRYGNRPSLGGIELMNEP--QGVNLDSLKKYYK 353
Query: 360 AGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ 419
YDAVRKY AYVIMSN L AD K LLSF +G ++VV+DVHYYNL+S+ F +NVQQ
Sbjct: 354 EAYDAVRKYNPNAYVIMSNPLD-ADSKVLLSFVTGFNKVVLDVHYYNLYSDKFTNMNVQQ 412
Query: 420 NIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCE 479
NIDY+NN+RASDL V+++N L+FVGEWT E
Sbjct: 413 NIDYINNERASDLSGVSSTNA-----------------------------LSFVGEWTDE 443
Query: 480 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 533
+ V+ AS QDYQR+ AQLDVY RATFGWAYWA+KC+ NHWSLKWMIENGYIKL
Sbjct: 444 FLVQGASMQDYQRYGQAQLDVYSRATFGWAYWAYKCQYNHWSLKWMIENGYIKL 497
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 534 | ||||||
| ASPGD|ASPL0000016384 | 405 | exgC [Emericella nidulans (tax | 0.586 | 0.772 | 0.338 | 2e-47 | |
| CGD|CAL0006153 | 438 | XOG1 [Candida albicans (taxid: | 0.593 | 0.723 | 0.319 | 1.2e-45 | |
| UNIPROTKB|P29717 | 438 | XOG1 "Glucan 1,3-beta-glucosid | 0.593 | 0.723 | 0.319 | 1.2e-45 | |
| SGD|S000004291 | 448 | EXG1 "Major exo-1,3-beta-gluca | 0.597 | 0.712 | 0.300 | 4.6e-42 | |
| SGD|S000005716 | 445 | SPR1 "Sporulation-specific exo | 0.588 | 0.705 | 0.306 | 2.2e-40 | |
| POMBASE|SPBC1105.05 | 407 | exg1 "glucan 1,6-beta-glucosid | 0.586 | 0.769 | 0.291 | 1.8e-35 | |
| CGD|CAL0006050 | 479 | EXG2 [Candida albicans (taxid: | 0.301 | 0.336 | 0.339 | 2.2e-30 | |
| UNIPROTKB|Q5AIA1 | 479 | EXG2 "Putative uncharacterized | 0.301 | 0.336 | 0.339 | 2.2e-30 | |
| CGD|CAL0006247 | 525 | SPR1 [Candida albicans (taxid: | 0.593 | 0.603 | 0.259 | 7.5e-28 | |
| UNIPROTKB|Q59Z61 | 525 | SPR1 "Putative uncharacterized | 0.593 | 0.603 | 0.259 | 7.5e-28 |
| ASPGD|ASPL0000016384 exgC [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 426 (155.0 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 116/343 (33%), Positives = 179/343 (52%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY +T G ++A L +HW+++IT+EDF ++ G+N VRIP+G+W A P +P+V
Sbjct: 59 EYTLTEVLGVEEAAARLSEHWNTFITEEDFALIAEAGLNYVRIPIGYWAAA-PLDGEPYV 117
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD--GFQEWGDSNVADTVAV 321
G + LDNA WA + +KVIVDLH APGSQNG ++S R G+Q+ GD+ V T+
Sbjct: 118 SGQLEHLDNAVAWARAHNLKVIVDLHGAPGSQNGFDNSGRRGPIGWQQ-GDT-VEQTILA 175
Query: 322 IDFLAARY-ANRPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 379
+ LA RY A+ ++ IE +NEP PG + D LK YY+ VRK + A +++ +
Sbjct: 176 FETLAQRYLADDDTVTMIEALNEPHVPGGINQDQLKDYYEETLARVRKNSPEATLLLHD- 234
Query: 380 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGA--VTT 437
G + F +G V++D H+Y +F N +++++ID A LG +
Sbjct: 235 -GFVQTEGWNGFMTG-ENVMMDTHHYEVFEGGQNAWSIEKHID-----AACQLGRQHLQA 287
Query: 438 SNGPLTFVGKSVTSALICKRCTQ---IRIRKRNLWLNFVGEWTC----EWNVKDASKQDY 490
++ P+ VG+ + C R I IR + C E +V S +
Sbjct: 288 ADKPV-IVGEWTGALSDCTRYLNGKGIGIRYDGTLGSNTAVGACGSKSEGSVAGLSADEI 346
Query: 491 ---QRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+RF AQLD + GW +W K E A W ++ ++ NG
Sbjct: 347 ANTRRFIEAQLDAFELRN-GWVFWTWKTEGAPGWDMQDLLANG 388
|
|
| CGD|CAL0006153 XOG1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 423 (154.0 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 109/341 (31%), Positives = 170/341 (49%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 323
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 324 FLAARYA-NRPS--LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 380
+ +Y N S + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 381 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN-----QRASDLGA 434
+ L+ A G VV+D H+Y +FS N+ +I N ++ S
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 327
Query: 435 VTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWT-----CEWNVKDASKQD 489
+ LT K + R + N ++G +W+ D K D
Sbjct: 328 AGEWSAALTDCAKWLNGV---NRGARYEGAYDNA--PYIGSCQPLLDISQWS--DEHKTD 380
Query: 490 YQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+R+ AQLD + T GW +W+ K E A WS + + NG
Sbjct: 381 TRRYIEAQLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNG 420
|
|
| UNIPROTKB|P29717 XOG1 "Glucan 1,3-beta-glucosidase" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 423 (154.0 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 109/341 (31%), Positives = 170/341 (49%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 323
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 324 FLAARYA-NRPS--LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 380
+ +Y N S + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 381 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN-----QRASDLGA 434
+ L+ A G VV+D H+Y +FS N+ +I N ++ S
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 327
Query: 435 VTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWT-----CEWNVKDASKQD 489
+ LT K + R + N ++G +W+ D K D
Sbjct: 328 AGEWSAALTDCAKWLNGV---NRGARYEGAYDNA--PYIGSCQPLLDISQWS--DEHKTD 380
Query: 490 YQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 529
+R+ AQLD + T GW +W+ K E A WS + + NG
Sbjct: 381 TRRYIEAQLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNG 420
|
|
| SGD|S000004291 EXG1 "Major exo-1,3-beta-glucanase of the cell wall" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 388 (141.6 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 104/346 (30%), Positives = 171/346 (49%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY G D A LQ HW ++ ++DF ++S G N VRIP+G+W A P+V
Sbjct: 90 EYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYW-AFQTLDDDPYV 148
Query: 264 GG-SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 322
G LD A WA +KV VDLH A GSQNG ++S RD ++ DSN+A T V+
Sbjct: 149 SGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTTNVL 208
Query: 323 DFLAARYANRPSL---AAIELINEPLAPGVALDTLKSYYKA-GYDAVRK-YTSTAYVIMS 377
+++ +Y+ L IELINEPL P + +D +K+ Y A Y+ +R S +I+
Sbjct: 209 NYILKKYSAEEYLDTVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIH 268
Query: 378 NRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 436
+ P ++ + ++ G V ID H+Y +F+++ ++++ID + + A + G
Sbjct: 269 DAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASD----QLERSIDE-HIKVACEWGTGV 323
Query: 437 TSNGPLTFVGKSVTSALIC-KRCTQIRIRKR--NLWLN------FVGEWTCEWNV---KD 484
+ T G+ + C K + R W+N ++G ++ D
Sbjct: 324 LNESHWTVCGEFAAALTDCTKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSD 383
Query: 485 ASKQDYQRFANAQLDVYGRATFGWAYWAHKCEAN-HWSLKWMIENG 529
K++ +R+ AQLD + GW W +K E++ W + ++ NG
Sbjct: 384 ERKENTRRYVEAQLDAF-EMRGGWIIWCYKTESSLEWDAQRLMFNG 428
|
|
| SGD|S000005716 SPR1 "Sporulation-specific exo-1,3-beta-glucanase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 105/343 (30%), Positives = 172/343 (50%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY G +KA + L HW ++ +EDF ++S G N VRIP+G+W A P+V
Sbjct: 91 EYHFCEKLGYEKAKERLYSHWSTFYKEEDFAKIASQGFNLVRIPIGYW-AFTTLSHDPYV 149
Query: 264 GGSSKV-LDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 322
+ LD A DWA KYG+KV +DLH A GSQNG ++S RD ++ D N++ T+ +
Sbjct: 150 TAEQEYFLDRAIDWARKYGLKVWIDLHGAAGSQNGFDNSGLRDSYKFLEDENLSATMKAL 209
Query: 323 DFLAARYANR---PSLAAIELINEPLAPGVALDTLKSYY-KAGYDAVR-KYTSTAYVIMS 377
++ ++Y+ ++ IEL+NEPL P + ++ LK+ K YD +R K S +++
Sbjct: 210 TYILSKYSTDVYLDTVIGIELLNEPLGPVIDMERLKNLLLKPAYDYLRNKINSNQIIVIH 269
Query: 378 NRLGPADHKE-LLSFASGLSRVVIDVHYYNLFS--------NNFNGLNVQQNIDYVNNQR 428
+ P + + L+ V+ID H+Y +FS N + Q D V+ +
Sbjct: 270 DAFQPYHYWDGFLNDEKNEYGVIIDHHHYQVFSQVELTRKMNERIKIACQWGKDAVSEKH 329
Query: 429 ASDLGAVTTSNGPLTFVGKSVTSALICKRC--TQIRIRKRNLWLNFVG--EWTCEWNVKD 484
S G + + LT K + + R + + +++ ++N E W +
Sbjct: 330 WSVAGEFSAA---LTDCTKWLNGVGLGARYDGSWTKDNEKSHYINTCANNENIALW--PE 384
Query: 485 ASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIE 527
KQ+ ++F AQLD + T GW W +K E N S++W +E
Sbjct: 385 ERKQNTRKFIEAQLDAF-EMTGGWIMWCYKTE-N--SIEWDVE 423
|
|
| POMBASE|SPBC1105.05 exg1 "glucan 1,6-beta-glucosidase Exg1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 337 (123.7 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 97/333 (29%), Positives = 156/333 (46%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
E+ G D+A L H+ S+ T+ DF ++S G+N +RIP+G+W N +P+V
Sbjct: 72 EWGFCEVLGADEAASQLAAHYSSFYTESDFATIASWGVNVLRIPIGYWAFN-VVDGEPYV 130
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN-VADTVAVI 322
G LD A WAE+YG+KV +DLH PGSQNG E+S + G W ++ V T+ +I
Sbjct: 131 QGQEYWLDQALTWAEQYGLKVWIDLHGVPGSQNGFENSG-KTGSIGWQQNDTVTRTLDII 189
Query: 323 DFLAARYANRPSLAA---IELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 379
++A +Y + IE +NEPL G+ +D LK Y Y+ V +S+ I+ +
Sbjct: 190 TYVANKYTQSQYASVVIGIETVNEPLGYGLDMDQLKQYDLDAYNIVNPLSSSVATIIHDA 249
Query: 380 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 439
+ + +V+DVH Y L+ ++ + ++ V +G S+
Sbjct: 250 YVDLSIWDYGVVSPSSYNLVMDVHRYQLYESDECSKTLDDHLSDV-----CSIGDSIASS 304
Query: 440 GPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNV-KDASKQDYQRFANAQL 498
+T G+ S + CT + F+G + + + D K + F QL
Sbjct: 305 PYITVTGE--WSGTLAD-CTIFEEGVDSS--TFIGPNSGDISTWTDEYKGAVRLFIETQL 359
Query: 499 DVYGRATFGWAYWAHKC--EANHWSLKWMIENG 529
D + R GW YW K + W + +IE G
Sbjct: 360 DQFERGA-GWIYWTAKTGGPSPTWDMGLLIEYG 391
|
|
| CGD|CAL0006050 EXG2 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 59/174 (33%), Positives = 95/174 (54%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY G +A + L DHW+S + DFK + G+N VRIP+G+W + + P+V
Sbjct: 79 EYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNMVRIPIGYW-SFEKLEGDPYV 137
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD-GFQEWGDSN--VADTVA 320
G+ LD A +W+ +KV++DLH AP +QNG ++S R+ G+ W + V T
Sbjct: 138 SGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGLRNLGYPGWQNKTEYVNHTYK 197
Query: 321 VIDFL-----AARYAN--RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK 367
V+ + +YA+ + ++ IE++NEPL P +D LK +Y Y+ R+
Sbjct: 198 VLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPN--MDKLKEFYIESYNDGRE 249
|
|
| UNIPROTKB|Q5AIA1 EXG2 "Putative uncharacterized protein EXG2" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 59/174 (33%), Positives = 95/174 (54%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY G +A + L DHW+S + DFK + G+N VRIP+G+W + + P+V
Sbjct: 79 EYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNMVRIPIGYW-SFEKLEGDPYV 137
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD-GFQEWGDSN--VADTVA 320
G+ LD A +W+ +KV++DLH AP +QNG ++S R+ G+ W + V T
Sbjct: 138 SGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGLRNLGYPGWQNKTEYVNHTYK 197
Query: 321 VIDFL-----AARYAN--RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK 367
V+ + +YA+ + ++ IE++NEPL P +D LK +Y Y+ R+
Sbjct: 198 VLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPN--MDKLKEFYIESYNDGRE 249
|
|
| CGD|CAL0006247 SPR1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 303 (111.7 bits), Expect = 7.5e-28, Sum P(2) = 7.5e-28
Identities = 88/339 (25%), Positives = 155/339 (45%)
Query: 204 EYQITNGFGP--DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKP 261
EY +T+ D LQ+HWD + + DF+ +S +N +RIP+G+W A + P P
Sbjct: 103 EYTLTSLLRDTMDNGSIYLQNHWDQFYNETDFQQISQLKLNLIRIPIGYW-AFELLPNDP 161
Query: 262 FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW--GDSNVADTV 319
++ G K LD A +WA KY + + + +H PGSQNG ++S W + N+ T
Sbjct: 162 YIQGQEKYLDIAIEWATKYNLFIQIGIHGLPGSQNGFDNSGLYTETPTWLENELNMNLTY 221
Query: 320 AVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 379
++D++ +Y N ++ +I+L+NEPL + + L ++Y + + + A +++ +
Sbjct: 222 RLVDYILNKYGNHTTIHSIQLVNEPLGFLLNKEKLSNFYIYCLEKIIQKNIKAKLVLHDA 281
Query: 380 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQ-----RASDLGA 434
+ S+ + ++D H Y +FS LN+QQ++ + +Q ++
Sbjct: 282 FFNIE-----SWKNFPGEFILDHHLYEVFSQWQIDLNLQQHLQSIKHQGESIVKSGHRSI 336
Query: 435 VTTSNGPLTFVGKSVTSALICKRCT-----QIRIRKRNLWLNFVGEWTCEWNVKDASKQD 489
V +G LT K + R +I RK N N E + N K +
Sbjct: 337 VGEFSGALTDCAKYLNGVGKGSRWDGSGDFEINDRKPNDDKNRTCEGHDDPN-NIMFKSE 395
Query: 490 YQRFANAQLDVYGRATFGWAYWAHKCEAN-HWSLKWMIE 527
F Q + GW +W K E+ W +K + E
Sbjct: 396 TMDFLKEQFYTFEEKGNGWIFWCWKTESTLDWDMKRLNE 434
|
|
| UNIPROTKB|Q59Z61 SPR1 "Putative uncharacterized protein SPR1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 303 (111.7 bits), Expect = 7.5e-28, Sum P(2) = 7.5e-28
Identities = 88/339 (25%), Positives = 155/339 (45%)
Query: 204 EYQITNGFGP--DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKP 261
EY +T+ D LQ+HWD + + DF+ +S +N +RIP+G+W A + P P
Sbjct: 103 EYTLTSLLRDTMDNGSIYLQNHWDQFYNETDFQQISQLKLNLIRIPIGYW-AFELLPNDP 161
Query: 262 FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW--GDSNVADTV 319
++ G K LD A +WA KY + + + +H PGSQNG ++S W + N+ T
Sbjct: 162 YIQGQEKYLDIAIEWATKYNLFIQIGIHGLPGSQNGFDNSGLYTETPTWLENELNMNLTY 221
Query: 320 AVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 379
++D++ +Y N ++ +I+L+NEPL + + L ++Y + + + A +++ +
Sbjct: 222 RLVDYILNKYGNHTTIHSIQLVNEPLGFLLNKEKLSNFYIYCLEKIIQKNIKAKLVLHDA 281
Query: 380 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQ-----RASDLGA 434
+ S+ + ++D H Y +FS LN+QQ++ + +Q ++
Sbjct: 282 FFNIE-----SWKNFPGEFILDHHLYEVFSQWQIDLNLQQHLQSIKHQGESIVKSGHRSI 336
Query: 435 VTTSNGPLTFVGKSVTSALICKRCT-----QIRIRKRNLWLNFVGEWTCEWNVKDASKQD 489
V +G LT K + R +I RK N N E + N K +
Sbjct: 337 VGEFSGALTDCAKYLNGVGKGSRWDGSGDFEINDRKPNDDKNRTCEGHDDPN-NIMFKSE 395
Query: 490 YQRFANAQLDVYGRATFGWAYWAHKCEAN-HWSLKWMIE 527
F Q + GW +W K E+ W +K + E
Sbjct: 396 TMDFLKEQFYTFEEKGNGWIFWCWKTESTLDWDMKRLNE 434
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 534 | |||
| COG2730 | 407 | COG2730, BglC, Endoglucanase [Carbohydrate transpo | 7e-32 | |
| pfam00150 | 269 | pfam00150, Cellulase, Cellulase (glycosyl hydrolas | 6e-15 | |
| cd00257 | 119 | cd00257, Fascin, Fascin-like domain; members inclu | 7e-04 |
| >gnl|CDD|225344 COG2730, BglC, Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 7e-32
Identities = 91/369 (24%), Positives = 139/369 (37%), Gaps = 44/369 (11%)
Query: 186 DDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 245
D L G G A +L+ HW ++IT+EDF + S G NAVR
Sbjct: 32 ADGLFKTDPKESPGQLVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVR 91
Query: 246 IPVGWWIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 303
IP+G+W P++ K+LD A +WA+K G+ V++DLH PG NG+EHS
Sbjct: 92 IPIGYWALQATDGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGY 151
Query: 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYD 363
+ + + NV T+ + F+A R+ N ++ ELINEP + +T YD
Sbjct: 152 TSDY-KEENENVEATIDIWKFIANRFKNYDTVIGFELINEPNGIVTS-ETWNGGDDEAYD 209
Query: 364 AVRKYTSTAYVIMSNRLGPAD--HKELLSFAS-GLSRVVIDVHYYNLFSNNFNGLNVQQN 420
VR + R+G ++ + G S D Y + ++
Sbjct: 210 VVRNAILSNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTAN--K 267
Query: 421 IDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEW 480
Y + D NG VG L C WLN+VG +
Sbjct: 268 HLYAPHVYGDD-----VLNGGSWTVGGE--FDLAETDCAI--------WLNYVGHGARKN 312
Query: 481 ------------------NVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEAN-HWS 521
N +D K + + + QLDV+ T W + +
Sbjct: 313 GYPTVIGEFGGNYNANNPNPQDERKDNVKVYLENQLDVFDT-TTYWINNPWSGGNDTGYD 371
Query: 522 LKWMIENGY 530
++ I G
Sbjct: 372 IEDDINLGL 380
|
Length = 407 |
| >gnl|CDD|215751 pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5) | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 6e-15
Identities = 49/208 (23%), Positives = 77/208 (37%), Gaps = 20/208 (9%)
Query: 223 HW--DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKY 280
HW Y T + G N VR+PV W P +D D+A
Sbjct: 16 HWGNPYYTTKAMIDLVKDWGFNVVRLPVSWGGYVPNNPDYLIDENWLNRVDEVVDYAIDN 75
Query: 281 GVKVIVDLHAAPGSQNGNEHSAT-RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIE 339
G+ VI+D H + N + T + F++ +A RY N P++ E
Sbjct: 76 GMYVIIDWHHDTWPGDPNGNIDTAKAFFKKLW-----------TQIATRYGNNPNV-IFE 123
Query: 340 LINEPLAPGVAL--DTLKSYYKAGYDAVRKYTSTAYVIM-SNRLGPADHKELLSFASGLS 396
L+NEP A D +K Y + DA+R +I+ L+ +
Sbjct: 124 LMNEPHGVDPATWDDDVKDYAQEAIDAIRAAGPNNLIIVGGPSWSQNPDGAALNDPNDDD 183
Query: 397 RVVIDVHYYN--LFSNNFNGLNVQQNID 422
++ VH+Y FS + G + N+
Sbjct: 184 NLIYSVHFYAPSHFSGTWFGCEDKTNLA 211
|
Length = 269 |
| >gnl|CDD|238160 cd00257, Fascin, Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 7e-04
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Query: 76 QKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVA 135
+Y++AE+GG V ANR S G ETF L N Y R ++ +++ ++ G V
Sbjct: 11 GRYLSAEAGGDK-VDANRDSLKGDETFTLEFDNTGKYALRSHDGKYLSADSDGG----VQ 65
Query: 136 VSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTAD 179
+ F + + L A NG ++ L A
Sbjct: 66 LEGHPNADCRFTLEFH--GDGKWALRAENGRYLGGDGSGTLKAS 107
|
Length = 119 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 534 | |||
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 100.0 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 99.95 | |
| cd00257 | 119 | Fascin Fascin-like domain; members include actin-b | 99.74 | |
| PF06268 | 111 | Fascin: Fascin domain; InterPro: IPR022768 This fa | 99.46 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 99.34 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 99.24 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.18 | |
| cd00257 | 119 | Fascin Fascin-like domain; members include actin-b | 99.13 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 99.02 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 99.0 | |
| PF06268 | 111 | Fascin: Fascin domain; InterPro: IPR022768 This fa | 98.94 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 98.82 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 98.76 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 98.75 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 98.71 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 98.71 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 98.69 | |
| PF06229 | 191 | FRG1: FRG1-like family; InterPro: IPR010414 This e | 98.67 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 98.61 | |
| PF06229 | 191 | FRG1: FRG1-like family; InterPro: IPR010414 This e | 98.6 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 98.6 | |
| PLN02998 | 497 | beta-glucosidase | 98.57 | |
| PLN02849 | 503 | beta-glucosidase | 98.56 | |
| PLN02814 | 504 | beta-glucosidase | 98.55 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 98.53 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 98.52 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 98.39 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 98.34 | |
| PF12876 | 88 | Cellulase-like: Sugar-binding cellulase-like; Inte | 98.31 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 98.02 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 97.94 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 97.93 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 97.91 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 97.9 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 97.83 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 97.78 | |
| PF04601 | 142 | DUF569: Protein of unknown function (DUF569); Inte | 97.51 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 97.48 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 97.25 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 97.03 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 96.99 | |
| PF02055 | 496 | Glyco_hydro_30: O-Glycosyl hydrolase family 30; In | 96.92 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 96.87 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 96.62 | |
| KOG3962 | 246 | consensus Predicted actin-bundling protein [Cytosk | 96.11 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 96.09 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 96.05 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 95.92 | |
| PF14587 | 384 | Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P | 95.77 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 95.69 | |
| PLN02161 | 531 | beta-amylase | 95.6 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 95.6 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 95.56 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 95.49 | |
| PLN02803 | 548 | beta-amylase | 95.45 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 95.38 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 95.28 | |
| PLN02801 | 517 | beta-amylase | 95.2 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 94.81 | |
| PLN00197 | 573 | beta-amylase; Provisional | 94.76 | |
| PLN02960 | 897 | alpha-amylase | 94.7 | |
| PLN02905 | 702 | beta-amylase | 94.66 | |
| PLN02705 | 681 | beta-amylase | 94.59 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 94.5 | |
| COG5520 | 433 | O-Glycosyl hydrolase [Cell envelope biogenesis, ou | 94.36 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 94.18 | |
| KOG2233 | 666 | consensus Alpha-N-acetylglucosaminidase [Intracell | 94.16 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 93.98 | |
| COG5309 | 305 | Exo-beta-1,3-glucanase [Carbohydrate transport and | 93.93 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 93.92 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 93.86 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 93.68 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 93.52 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 93.38 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 93.03 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 92.54 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 92.49 | |
| PF11790 | 239 | Glyco_hydro_cc: Glycosyl hydrolase catalytic core; | 91.98 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 91.84 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 91.82 | |
| PF07468 | 153 | Agglutinin: Agglutinin; InterPro: IPR008998 Agglut | 91.76 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 91.49 | |
| PF05089 | 333 | NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-b | 91.08 | |
| smart00791 | 139 | Agglutinin Amaranthus caudatus agglutinin or amara | 90.99 | |
| PLN02361 | 401 | alpha-amylase | 90.1 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 89.84 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 89.71 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 89.61 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 89.61 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 89.54 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 89.54 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 89.15 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 88.92 | |
| PF00167 | 122 | FGF: Fibroblast growth factor; InterPro: IPR002348 | 88.39 | |
| KOG3962 | 246 | consensus Predicted actin-bundling protein [Cytosk | 87.89 | |
| KOG0470 | 757 | consensus 1,4-alpha-glucan branching enzyme/starch | 86.97 | |
| cd02742 | 303 | GH20_hexosaminidase Beta-N-acetylhexosaminidases o | 86.51 | |
| PLN02784 | 894 | alpha-amylase | 86.11 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 85.96 | |
| PF04601 | 142 | DUF569: Protein of unknown function (DUF569); Inte | 84.85 | |
| PRK07379 | 400 | coproporphyrinogen III oxidase; Provisional | 84.61 | |
| PRK05628 | 375 | coproporphyrinogen III oxidase; Validated | 83.56 | |
| TIGR02401 | 825 | trehalose_TreY malto-oligosyltrehalose synthase. T | 83.55 | |
| PRK08208 | 430 | coproporphyrinogen III oxidase; Validated | 83.27 | |
| PRK05799 | 374 | coproporphyrinogen III oxidase; Provisional | 83.24 | |
| PRK05904 | 353 | coproporphyrinogen III oxidase; Provisional | 83.23 | |
| cd06564 | 326 | GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( | 82.25 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 82.25 | |
| PRK05660 | 378 | HemN family oxidoreductase; Provisional | 82.21 | |
| PRK14511 | 879 | maltooligosyl trehalose synthase; Provisional | 81.96 | |
| COG0366 | 505 | AmyA Glycosidases [Carbohydrate transport and meta | 81.7 | |
| PRK06294 | 370 | coproporphyrinogen III oxidase; Provisional | 81.31 | |
| cd06565 | 301 | GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) | 81.24 | |
| PRK13347 | 453 | coproporphyrinogen III oxidase; Provisional | 80.93 | |
| PRK08599 | 377 | coproporphyrinogen III oxidase; Provisional | 80.69 | |
| PF03662 | 319 | Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t | 80.16 | |
| COG0635 | 416 | HemN Coproporphyrinogen III oxidase and related Fe | 80.03 |
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=274.81 Aligned_cols=253 Identities=29% Similarity=0.432 Sum_probs=172.4
Q ss_pred ccCCC-CCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC
Q 009475 223 HWDSY-ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 301 (534)
Q Consensus 223 hw~~~-ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s 301 (534)
||.+. +++++|+.|+++|+|+|||||.|..+.++.++..+.+..+++||++|++|+++||+||||+|..|+..++.+
T Consensus 16 ~w~~~~~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~~~w~~~~~-- 93 (281)
T PF00150_consen 16 HWYNPSITEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAYGIYVILDLHNAPGWANGGD-- 93 (281)
T ss_dssp TTSGGGSHHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEESTTCSSSTS--
T ss_pred ccCCCCCHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhCCCeEEEEeccCcccccccc--
Confidence 35433 889999999999999999999986665555544567789999999999999999999999999876522111
Q ss_pred CCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC-------hHHHHHHHHHHHHHHHhcCCceE
Q 009475 302 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA-------LDTLKSYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 302 g~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~-------~~~~~~~~~~~~~aIR~~~p~~~ 373 (534)
.... ....+.+.++|+.||+||++++.+++|||+|||...... .+.+.+++++++++||+++|+++
T Consensus 94 ------~~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~~ 167 (281)
T PF00150_consen 94 ------GYGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNHL 167 (281)
T ss_dssp ------TTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSSE
T ss_pred ------ccccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcce
Confidence 1111 345667888999999999999999999999999974322 37889999999999999999999
Q ss_pred EEEeC-CCCCCChhh-hhccc-CCCceEEEEEeecccCCCCCCCC-chhhhHHHHHhhhhhhhhhhhccCCCeEEEeecc
Q 009475 374 VIMSN-RLGPADHKE-LLSFA-SGLSRVVIDVHYYNLFSNNFNGL-NVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSV 449 (534)
Q Consensus 374 Iiv~~-~~~~~~~~~-~~~~~-~~~~nvv~d~H~Y~~f~~~~~~~-~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws 449 (534)
|++++ .|. .+... ....+ ....+++|++|.|.++....... ........+.......+..... .+.+++
T Consensus 168 i~~~~~~~~-~~~~~~~~~~P~~~~~~~~~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~pv~----- 240 (281)
T PF00150_consen 168 IIVGGGGWG-ADPDGAAADNPNDADNNDVYSFHFYDPYDFSDQWNPGNWGDASALESSFRAALNWAKK-NGKPVV----- 240 (281)
T ss_dssp EEEEEHHHH-TBHHHHHHHSTTTTTTSEEEEEEEETTTCHHTTTSTCSHHHHHHHHHHHHHHHHHHHH-TTSEEE-----
T ss_pred eecCCCccc-cccchhhhcCcccccCceeEEeeEeCCCCcCCccccccchhhhHHHHHHHHHHHHHHH-cCCeEE-----
Confidence 99975 343 23222 22333 24789999999999875211111 1111111221111111222222 233445
Q ss_pred cchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccCC
Q 009475 450 TSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 517 (534)
Q Consensus 450 ~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~ 517 (534)
+|||+....- .. ....+..+.++.+++.++||+||+||.++
T Consensus 241 -----------------------~gE~G~~~~~-~~---~~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 281 (281)
T PF00150_consen 241 -----------------------VGEFGWSNND-GN---GSTDYADAWLDYLEQNGIGWIYWSWKPNS 281 (281)
T ss_dssp -----------------------EEEEESSTTT-SC---HHHHHHHHHHHHHHHTTCEEEECEESSSS
T ss_pred -----------------------EeCcCCcCCC-CC---cCHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 6777664211 11 23334444478888899999999999753
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-28 Score=257.12 Aligned_cols=303 Identities=29% Similarity=0.472 Sum_probs=206.6
Q ss_pred ccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-CCCCCC--chHHHHHHHHHHHH
Q 009475 202 RGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVG--GSSKVLDNAFDWAE 278 (534)
Q Consensus 202 ~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-~~~~~~--~~l~~ld~~v~~a~ 278 (534)
.++...+.-+|...+...++.||.+++++++|..|+++|||+||||++||.+ .+.. ..|+.. ..+.+|+++|++|+
T Consensus 48 ~~~~~~g~~lg~~~~~~~~~~~w~~~~~~~~~~~ik~~G~n~VRiPi~~~~~-~~~~~~~p~~~~~~~~~~ld~~I~~a~ 126 (407)
T COG2730 48 VGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVRIPIGYWAL-QATDGDNPYLIGLTQLKILDEAINWAK 126 (407)
T ss_pred ecccccceecCchhhcccchhccchhhhhhHHHHHHHcCCcEEEcccchhhh-hccCCCCCCeecchHHHHHHHHHHHHH
Confidence 3444445556777788899999999999999999999999999999999986 3322 245543 57779999999999
Q ss_pred HCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHH
Q 009475 279 KYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYY 358 (534)
Q Consensus 279 ~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~ 358 (534)
++||+|+||+|.+||++++.++++....... ...+.+++++.|++||.||++.+.|++||++|||+. -...+.|....
T Consensus 127 ~~gi~V~iD~H~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~w~~ia~~f~~~~~VIg~~~~NEP~~-~~~~~~w~~~~ 204 (407)
T COG2730 127 KLGIYVLIDLHGYPGGNNGHEHSGYTSDYKE-ENENVEATIDIWKFIANRFKNYDTVIGFELINEPNG-IVTSETWNGGD 204 (407)
T ss_pred hcCeeEEEEecccCCCCCCcCcccccccccc-cchhHHHHHHHHHHHHHhccCCCceeeeeeecCCcc-cCCccccccch
Confidence 9999999999999999999999986644332 467789999999999999999999999999999995 12234455555
Q ss_pred HHHHHHHH-hcCCce---EEEEeCC-CCC---CChhhhhc-----------ccCCCceEEEEEeecccCCCCCCCCchhh
Q 009475 359 KAGYDAVR-KYTSTA---YVIMSNR-LGP---ADHKELLS-----------FASGLSRVVIDVHYYNLFSNNFNGLNVQQ 419 (534)
Q Consensus 359 ~~~~~aIR-~~~p~~---~Iiv~~~-~~~---~~~~~~~~-----------~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~ 419 (534)
..+++.|| +....+ +|.+++. +.. .....+.. .+..++++....|.|.|+...
T Consensus 205 ~~A~~~v~~~i~~~~~~~~I~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------- 276 (407)
T COG2730 205 DEAYDVVRNAILSNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTANKHLYAPHVYG-------- 276 (407)
T ss_pred HHHHHHHHhhhhhcCceEEEEECcccccCCeeeccCCCccccccccCCceeeeccchhhhccceeccceeec--------
Confidence 67777775 444444 3433321 111 00000000 011111233444444443210
Q ss_pred hHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhh---hhhhcccccccccccccccCC-----CcccHHHHH
Q 009475 420 NIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQI---RIRKRNLWLNFVGEWTCEWNV-----KDASKQDYQ 491 (534)
Q Consensus 420 ~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~---~~~~~~~~~~~vGEws~~~~~-----~~a~~~~~~ 491 (534)
...+ .... ....+|++.+.++|+..... ..+ ..+.+..+|||+...+. ....++..+
T Consensus 277 ---------~~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~Ge~g~~~~~~~~~~~~~~~~~~~ 341 (407)
T COG2730 277 ---------DDVL----NGGS-WTVGGEFDLAETDCAIWLNYVGHGAR-KNGYPTVIGEFGGNYNANNPNPQDERKDNVK 341 (407)
T ss_pred ---------chhh----cCCC-CCccCCcccccccceeeecceeeccc-ccceeeeeccccCccccCCCCccchhhHHHH
Confidence 0000 0001 12226778888888753332 112 34456779999876631 134567789
Q ss_pred HHHHHHHHHHhcCCCcEEEEccccCC-CCCChhHHHHCCCc
Q 009475 492 RFANAQLDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYI 531 (534)
Q Consensus 492 ~~~~aq~~~~e~~~~GW~fWt~K~~~-~~Ws~~~~v~~g~i 531 (534)
.+++.+.+++.. .++|++|+++.+. ..|+++.....+..
T Consensus 342 ~~~~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 381 (407)
T COG2730 342 VYLENQLDVFDT-TTYWINNPWSGGNDTGYDIEDDINLGLF 381 (407)
T ss_pred HHhhhhhhhccc-eeEEEeecccCCCCCccchhhcchhhcc
Confidence 999999999997 8899999999984 78888886666544
|
|
| >cd00257 Fascin Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.3e-17 Score=145.08 Aligned_cols=109 Identities=28% Similarity=0.370 Sum_probs=97.5
Q ss_pred ceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCce
Q 009475 66 TQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSET 145 (534)
Q Consensus 66 ~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~Et 145 (534)
-||+|||. +|+|||++.+| ..|.|||+.+++||+|+|.+.++++++||++||+||+++.. | .|.|+++ ++++|.
T Consensus 2 p~v~Lrs~-~gkyl~~~~~g-~~v~a~~~~~~~~e~F~l~~~~~g~v~Lrs~~G~yls~~~~--g-~l~~~~~-~~~~e~ 75 (119)
T cd00257 2 PQVVLRSV-NGRYLSAEAGG-DKVDANRDSLKGDETFTLEFDNTGKYALRSHDGKYLSADSD--G-GVQLEGH-PNADCR 75 (119)
T ss_pred cEEEEEEc-CCCEEEEeccC-CEEEEcCccCCCceEEEEEECCCCeEEEEECCCcEEEEECC--C-CEEecCC-CCCCcE
Confidence 48999998 99999999988 58999999999999999999999999999999999999864 3 5899998 999999
Q ss_pred EEEEEeCCCCceEEEEecCCceEEecccceeecCCCC
Q 009475 146 FQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS 182 (534)
Q Consensus 146 F~ivr~~~~~~~v~i~~~nG~~Lq~~g~~~v~ad~~~ 182 (534)
|++...+++ .+.+++.||+||.++.+..+.++...
T Consensus 76 F~~e~~~~g--~~al~~~~G~yl~~~~~g~l~~~~~~ 110 (119)
T cd00257 76 FTLEFHGDG--KWALRAENGRYLGGDGSGTLKASSET 110 (119)
T ss_pred EEEEECCCC--eEEEEcCCCCEEeecCCCeEEEecCC
Confidence 999987655 58999999999999877777777654
|
|
| >PF06268 Fascin: Fascin domain; InterPro: IPR022768 This family consists of several eukaryotic fascin or singed proteins | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.9e-13 Score=117.11 Aligned_cols=100 Identities=33% Similarity=0.466 Sum_probs=87.8
Q ss_pred eeEEEeecCCCceEEeccCCCCCcceEEEEEecC-ceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCceEEEEEeCCC
Q 009475 76 QKYIAAESGGGTIVVANRTSASGWETFRLWRVNE-TFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGD 154 (534)
Q Consensus 76 ~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~-~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~EtF~ivr~~~~ 154 (534)
++|+++|+.|+. |.|||...+.||+|+|+..++ ..++||++||+|++++.. +.|+|+++++++++.|+|+..
T Consensus 2 ~~~~~~~k~~~~-l~an~~~~~~~e~f~le~~~~~~~v~lrs~~GkYls~~~~---G~v~~~~~~~~~~~~F~i~~~--- 74 (111)
T PF06268_consen 2 NGYLVSEKFGAH-LNANRASLSDWETFQLEFDDGSYKVALRSHNGKYLSVDSD---GSVVADSETPGPDEFFEIEWH--- 74 (111)
T ss_dssp TEEEEETTCTCB-EEEEESSSSCGGSEEEEEETTEEEEEEECTTSEEEEEETT---SEEEEEESSSSGGGCBEEEEE---
T ss_pred CcEEEEEEcCCE-EECChhcCcccEEEEEEEECCCCEEEEEcCCCCEEEEcCC---CeEEecCCCCCCCcEEEEEEC---
Confidence 589999998655 899999999999999997765 556899999999999864 359999999999999999999
Q ss_pred CceEEEEecCCceEEecccceeecCCCC
Q 009475 155 SSRVRLSASNGMFIQAISETRLTADYGS 182 (534)
Q Consensus 155 ~~~v~i~~~nG~~Lq~~g~~~v~ad~~~ 182 (534)
++.+.++++||+||.+.++..+.|+...
T Consensus 75 ~~~~~~~~~nGkYl~~~~~g~l~a~~~~ 102 (111)
T PF06268_consen 75 GGKVALRASNGKYLSAGPNGQLKANATS 102 (111)
T ss_dssp TTEEEEECTTSCEEEEETTTEEEEEESS
T ss_pred CCEEEEECCCCCEEeeCCCCeEEEcCCC
Confidence 3468899999999999998898887665
|
The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture []. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven []. Members of this family are histidine rich, typically contain the repeated motif of HHXH []. ; GO: 0030674 protein binding, bridging, 0051015 actin filament binding; PDB: 1DFC_B 3P53_B 3LLP_A 1HCE_A 1HCD_A. |
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.3e-11 Score=121.27 Aligned_cols=239 Identities=21% Similarity=0.311 Sum_probs=132.4
Q ss_pred CHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCC-----CCCCCCCCCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA-----APGSQNGNEHSAT 303 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~-----~pG~qng~~~sg~ 303 (534)
.++-|+.||+.|+|.|||-+ | .+|..+. -..++...++.+.|+++||+|+||+|- .||.|.
T Consensus 26 ~~d~~~ilk~~G~N~vRlRv--w--v~P~~~g---~~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~------- 91 (332)
T PF07745_consen 26 EKDLFQILKDHGVNAVRLRV--W--VNPYDGG---YNDLEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQN------- 91 (332)
T ss_dssp B--HHHHHHHTT--EEEEEE-----SS-TTTT---TTSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B-------
T ss_pred CCCHHHHHHhcCCCeEEEEe--c--cCCcccc---cCCHHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCC-------
Confidence 46789999999999999976 3 3443311 136888888999999999999999994 354442
Q ss_pred CCCCCCCCh----hhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCC-------CCCCChHHHHHHHHHHHHHHHhcCCc
Q 009475 304 RDGFQEWGD----SNVADTVAVIDFLAARYANRP-SLAAIELINEPL-------APGVALDTLKSYYKAGYDAVRKYTST 371 (534)
Q Consensus 304 ~~g~~~W~~----~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~-------~~~~~~~~~~~~~~~~~~aIR~~~p~ 371 (534)
-...|.. .-.+...++-+.+.+.+++.. ..-.+++-||-. ......+.+.++...++++||+.+|+
T Consensus 92 --~P~aW~~~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ll~ag~~AVr~~~p~ 169 (332)
T PF07745_consen 92 --KPAAWANLSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGMLWPDGKPSNWDNLAKLLNAGIKAVREVDPN 169 (332)
T ss_dssp ----TTCTSSSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESSSGGGESTBTTTCTT-HHHHHHHHHHHHHHHHTHSST
T ss_pred --CCccCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCccccccccCcCCCccCHHHHHHHHHHHHHHHHhcCCC
Confidence 2345761 122233344444545555432 223368899944 33455778899999999999999999
Q ss_pred eEEEEeCCCCCCCh---hhhhcc--cCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEe
Q 009475 372 AYVIMSNRLGPADH---KELLSF--ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 446 (534)
Q Consensus 372 ~~Iiv~~~~~~~~~---~~~~~~--~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vg 446 (534)
..|+++-.-. .+. ..+.+. ..+.+--|+.+++|+-|.. + ++.+... +..+.+..++.+++-
T Consensus 170 ~kV~lH~~~~-~~~~~~~~~f~~l~~~g~d~DviGlSyYP~w~~-----~----l~~l~~~----l~~l~~ry~K~V~V~ 235 (332)
T PF07745_consen 170 IKVMLHLANG-GDNDLYRWFFDNLKAAGVDFDVIGLSYYPFWHG-----T----LEDLKNN----LNDLASRYGKPVMVV 235 (332)
T ss_dssp SEEEEEES-T-TSHHHHHHHHHHHHHTTGG-SEEEEEE-STTST----------HHHHHHH----HHHHHHHHT-EEEEE
T ss_pred CcEEEEECCC-CchHHHHHHHHHHHhcCCCcceEEEecCCCCcc-----h----HHHHHHH----HHHHHHHhCCeeEEE
Confidence 9999973211 121 222221 1356778999999954431 2 2222221 222222224344445
Q ss_pred ec----ccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhc----CCCcEEEE
Q 009475 447 KS----VTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR----ATFGWAYW 511 (534)
Q Consensus 447 Ew----s~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~----~~~GW~fW 511 (534)
|- +....|++ .+.+++.+. ...-.++++..++|+++.+++-.. .+.|-|||
T Consensus 236 Et~yp~t~~d~D~~-------------~n~~~~~~~-~~~yp~t~~GQ~~~l~~l~~~v~~~p~~~g~GvfYW 294 (332)
T PF07745_consen 236 ETGYPWTLDDGDGT-------------GNIIGATSL-ISGYPATPQGQADFLRDLINAVKNVPNGGGLGVFYW 294 (332)
T ss_dssp EE---SBS--SSSS---------------SSSSSTG-GTTS-SSHHHHHHHHHHHHHHHHTS--TTEEEEEEE
T ss_pred eccccccccccccc-------------cccCccccc-cCCCCCCHHHHHHHHHHHHHHHHHhccCCeEEEEee
Confidence 52 22222221 122444331 111246788889999999887765 67899999
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.3e-11 Score=127.22 Aligned_cols=142 Identities=20% Similarity=0.222 Sum_probs=103.3
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.|+++|+|++|++|.|- ...|.....+++..++.++++|+.|+++||.+||+||+..-.+.
T Consensus 50 ~d~y~~y--~eDi~l~~~~G~~~~R~si~Ws-ri~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~Hfd~P~~---- 122 (427)
T TIGR03356 50 CDHYHRY--EEDVALMKELGVDAYRFSIAWP-RIFPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYHWDLPQA---- 122 (427)
T ss_pred ccHHHhH--HHHHHHHHHcCCCeEEcccchh-hcccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeeccCCccHH----
Confidence 3466666 8999999999999999999874 44555224677789999999999999999999999998632110
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-------------CC-h------HHHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-------------VA-L------DTLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~-------------~~-~------~~~~~~~~ 359 (534)
......|. +...+.+.++++.+++||++... -|+++|||.... .+ . ..+.....
T Consensus 123 ---l~~~gGw~~~~~~~~f~~ya~~~~~~~~d~v~--~w~t~NEp~~~~~~~y~~G~~~P~~~~~~~~~~~~hnll~Aha 197 (427)
T TIGR03356 123 ---LEDRGGWLNRDTAEWFAEYAAVVAERLGDRVK--HWITLNEPWCSAFLGYGLGVHAPGLRDLRAALQAAHHLLLAHG 197 (427)
T ss_pred ---HHhcCCCCChHHHHHHHHHHHHHHHHhCCcCC--EEEEecCcceecccchhhccCCCCCccHHHHHHHHHHHHHHHH
Confidence 00012355 67889999999999999999643 368999998410 01 1 12234456
Q ss_pred HHHHHHHhcCCceEE
Q 009475 360 AGYDAVRKYTSTAYV 374 (534)
Q Consensus 360 ~~~~aIR~~~p~~~I 374 (534)
++++++|+..|+..|
T Consensus 198 ~A~~~~~~~~~~~~I 212 (427)
T TIGR03356 198 LAVQALRANGPGAQV 212 (427)
T ss_pred HHHHHHHHhCCCCeE
Confidence 788889988876443
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.6e-11 Score=124.72 Aligned_cols=144 Identities=24% Similarity=0.359 Sum_probs=96.0
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc--CCCCCC---CC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL--HAAPGS---QN 296 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl--H~~pG~---qn 296 (534)
+||..-..++|++.|+++|+|+|||..-.|...+|.++ .| .++.||++|+.|+++||+|||.+ +..|.. ..
T Consensus 5 e~~~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG-~y---dF~~lD~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~ 80 (374)
T PF02449_consen 5 EQWPEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEG-QY---DFSWLDRVLDLAAKHGIKVILGTPTAAPPAWLYDKY 80 (374)
T ss_dssp GGS-CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTT-B------HHHHHHHHHHHCTT-EEEEEECTTTS-HHHHCCS
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCC-ee---ecHHHHHHHHHHHhccCeEEEEecccccccchhhhc
Confidence 35655566999999999999999997656677788654 56 58889999999999999999977 333421 00
Q ss_pred C----CCCCCCC--CCCC----CCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-CCC---hHHHHHHHHHHH
Q 009475 297 G----NEHSATR--DGFQ----EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVA---LDTLKSYYKAGY 362 (534)
Q Consensus 297 g----~~~sg~~--~g~~----~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-~~~---~~~~~~~~~~~~ 362 (534)
. .+..|.. .+.. ...+...+...++++.|++||+++|+|+++++-|||... ... ...+++|+++-|
T Consensus 81 Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~~~~~~~~~~~~f~~wLk~kY 160 (374)
T PF02449_consen 81 PEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGYHRCYSPACQAAFRQWLKEKY 160 (374)
T ss_dssp GCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTCTS--SHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCcCcCCChHHHHHHHHHHHHHh
Confidence 0 0111111 1111 111567888899999999999999999999999999762 222 356778888777
Q ss_pred HHHHhcC
Q 009475 363 DAVRKYT 369 (534)
Q Consensus 363 ~aIR~~~ 369 (534)
..|-+.+
T Consensus 161 ~ti~~LN 167 (374)
T PF02449_consen 161 GTIEALN 167 (374)
T ss_dssp SSHHHHH
T ss_pred CCHHHHH
Confidence 7666543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >cd00257 Fascin Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.1e-10 Score=101.44 Aligned_cols=77 Identities=26% Similarity=0.328 Sum_probs=69.1
Q ss_pred cceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCc
Q 009475 65 GTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSE 144 (534)
Q Consensus 65 g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~E 144 (534)
...|+||| .+|+||+++..| .|.++++ ++.||+|++...++++++||+.||+||+++.. | .|.|++++++++|
T Consensus 43 ~g~v~Lrs-~~G~yls~~~~g--~l~~~~~-~~~~e~F~~e~~~~g~~al~~~~G~yl~~~~~--g-~l~~~~~~~~~~e 115 (119)
T cd00257 43 TGKYALRS-HDGKYLSADSDG--GVQLEGH-PNADCRFTLEFHGDGKWALRAENGRYLGGDGS--G-TLKASSETVGPDE 115 (119)
T ss_pred CCeEEEEE-CCCcEEEEECCC--CEEecCC-CCCCcEEEEEECCCCeEEEEcCCCCEEeecCC--C-eEEEecCCCCccc
Confidence 57899998 699999998766 5899998 99999999999988999999999999999863 3 6999999999999
Q ss_pred eEEE
Q 009475 145 TFQI 148 (534)
Q Consensus 145 tF~i 148 (534)
.|.+
T Consensus 116 ~f~~ 119 (119)
T cd00257 116 LFEL 119 (119)
T ss_pred eecC
Confidence 9964
|
|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.2e-08 Score=111.15 Aligned_cols=152 Identities=21% Similarity=0.250 Sum_probs=99.9
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCC--CCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA--APGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~--~pG~qng~~~sg~~~g~ 307 (534)
..|++.||++|+|+||+. +. |.. .++++.|.++||+|+-++-. ...... ..........
T Consensus 316 ~~d~~l~K~~G~N~vR~s-----h~------p~~-------~~~~~~cD~~GllV~~E~p~~~~~~~~~-~~~~~~~~~~ 376 (604)
T PRK10150 316 VHDHNLMKWIGANSFRTS-----HY------PYS-------EEMLDLADRHGIVVIDETPAVGLNLSFG-AGLEAGNKPK 376 (604)
T ss_pred HHHHHHHHHCCCCEEEec-----cC------CCC-------HHHHHHHHhcCcEEEEeccccccccccc-cccccccccc
Confidence 568899999999999992 11 111 46789999999999987632 110000 0000000011
Q ss_pred CCCC-----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCC-C
Q 009475 308 QEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL-G 381 (534)
Q Consensus 308 ~~W~-----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~-~ 381 (534)
+.|. +...+...+.++.+.+|+++||+|++|.+.|||.. ..+....+++++++.+|+.||+++|...... .
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~mv~r~~NHPSIi~Ws~gNE~~~---~~~~~~~~~~~l~~~~k~~DptR~vt~~~~~~~ 453 (604)
T PRK10150 377 ETYSEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPAS---REQGAREYFAPLAELTRKLDPTRPVTCVNVMFA 453 (604)
T ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCceEEEEeeccCCCc---cchhHHHHHHHHHHHHHhhCCCCceEEEecccC
Confidence 1221 24556778889999999999999999999999864 2345678899999999999999999886421 1
Q ss_pred CCChhhhhcccCCCceEEEEEeecccC
Q 009475 382 PADHKELLSFASGLSRVVIDVHYYNLF 408 (534)
Q Consensus 382 ~~~~~~~~~~~~~~~nvv~d~H~Y~~f 408 (534)
......+ ...--|+++|.|..|
T Consensus 454 ~~~~~~~-----~~~~Dv~~~N~Y~~w 475 (604)
T PRK10150 454 TPDTDTV-----SDLVDVLCLNRYYGW 475 (604)
T ss_pred Ccccccc-----cCcccEEEEccccee
Confidence 0111111 123468888887654
|
|
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.3e-08 Score=97.12 Aligned_cols=165 Identities=24% Similarity=0.397 Sum_probs=106.6
Q ss_pred CHHHHHHHHhCCccEEEeCcccccccCCC--CCCCCCCc--hHHHHHHHHHHHHHCCCEEEEEcCC-----CCCCCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPVGWWIANDPT--PPKPFVGG--SSKVLDNAFDWAEKYGVKVIVDLHA-----APGSQNGNE 299 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~~w~~~~~~--~~~~~~~~--~l~~ld~~v~~a~~~Gl~VIlDlH~-----~pG~qng~~ 299 (534)
.++-|+.||++|+|.|||-| | .+|. .+.+|..+ .++..-++-+.|++.||+|++|+|- .|+.|+
T Consensus 65 ~qD~~~iLK~~GvNyvRlRv--w--ndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFHYSDfwaDPakQ~--- 137 (403)
T COG3867 65 RQDALQILKNHGVNYVRLRV--W--NDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFHYSDFWADPAKQK--- 137 (403)
T ss_pred HHHHHHHHHHcCcCeEEEEE--e--cCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeeccchhhccChhhcC---
Confidence 36778889999999999976 3 3442 33455443 4555566677889999999999994 344432
Q ss_pred CCCCCCCCCCCC----hhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCC-------CCChHHHHHHHHHHHHHHHh
Q 009475 300 HSATRDGFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRK 367 (534)
Q Consensus 300 ~sg~~~g~~~W~----~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~ 367 (534)
....|. +.-.....++-+...+.+++.. ..-..++-||-... +...+.+..+..+++++||+
T Consensus 138 ------kPkaW~~l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avre 211 (403)
T COG3867 138 ------KPKAWENLNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVRE 211 (403)
T ss_pred ------CcHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCceeccCCCCcChHHHHHHHHHHhhhhhh
Confidence 334575 2222334456666666676653 22335788997642 23578899999999999999
Q ss_pred cCCceEEEEeCCCCC-CC-----hhhhhcccCCCceEEEEEeecccC
Q 009475 368 YTSTAYVIMSNRLGP-AD-----HKELLSFASGLSRVVIDVHYYNLF 408 (534)
Q Consensus 368 ~~p~~~Iiv~~~~~~-~~-----~~~~~~~~~~~~nvv~d~H~Y~~f 408 (534)
++|+..|+++-.-+. .+ ++++.. ..-+..|+...+|+-|
T Consensus 212 v~p~ikv~lHla~g~~n~~y~~~fd~ltk--~nvdfDVig~SyYpyW 256 (403)
T COG3867 212 VSPTIKVALHLAEGENNSLYRWIFDELTK--RNVDFDVIGSSYYPYW 256 (403)
T ss_pred cCCCceEEEEecCCCCCchhhHHHHHHHH--cCCCceEEeeeccccc
Confidence 999999888621111 11 122222 3446678888888444
|
|
| >PF06268 Fascin: Fascin domain; InterPro: IPR022768 This family consists of several eukaryotic fascin or singed proteins | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.5e-09 Score=92.04 Aligned_cols=77 Identities=23% Similarity=0.300 Sum_probs=68.5
Q ss_pred cceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCc
Q 009475 65 GTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSE 144 (534)
Q Consensus 65 g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~E 144 (534)
+..|+||| .+|||++++.-| .|+|++..++.|++|+|... ++.+.||+.||+||+++. ++.|.|++++|+.+|
T Consensus 35 ~~~v~lrs-~~GkYls~~~~G--~v~~~~~~~~~~~~F~i~~~-~~~~~~~~~nGkYl~~~~---~g~l~a~~~~~~~~e 107 (111)
T PF06268_consen 35 SYKVALRS-HNGKYLSVDSDG--SVVADSETPGPDEFFEIEWH-GGKVALRASNGKYLSAGP---NGQLKANATSPGKDE 107 (111)
T ss_dssp EEEEEEEC-TTSEEEEEETTS--EEEEEESSSSGGGCBEEEEE-TTEEEEECTTSCEEEEET---TTEEEEEESSSSGGG
T ss_pred CCEEEEEc-CCCCEEEEcCCC--eEEecCCCCCCCcEEEEEEC-CCEEEEECCCCCEEeeCC---CCeEEEcCCCCCcce
Confidence 46778997 699999998866 69999999999999999988 788899999999999875 346999999999999
Q ss_pred eEEE
Q 009475 145 TFQI 148 (534)
Q Consensus 145 tF~i 148 (534)
.|++
T Consensus 108 lf~~ 111 (111)
T PF06268_consen 108 LFEY 111 (111)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9985
|
The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture []. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven []. Members of this family are histidine rich, typically contain the repeated motif of HHXH []. ; GO: 0030674 protein binding, bridging, 0051015 actin filament binding; PDB: 1DFC_B 3P53_B 3LLP_A 1HCE_A 1HCD_A. |
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.7e-09 Score=111.44 Aligned_cols=115 Identities=15% Similarity=0.166 Sum_probs=87.9
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||+.| ++|++.|+++|+|+.|++|.|.-++....+....+..++..+++|+.++++||.+||+||+..-.+.-.
T Consensus 67 ~D~Yhry--~eDi~l~~~lG~~~yR~si~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~~~P~~l~-- 142 (474)
T PRK09852 67 IDFYHRY--KEDIALMAEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLV-- 142 (474)
T ss_pred Cchhhhh--HHHHHHHHHcCCCeEEeeceeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHH--
Confidence 3577777 899999999999999999998644432212235778999999999999999999999999863221100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.|.++++.++++|++.-.. |=.+|||.
T Consensus 143 ----~~~GGW~~~~~~~~F~~ya~~~~~~fgd~Vk~--WiTfNEPn 182 (474)
T PRK09852 143 ----TEYGSWRNRKMVEFFSRYARTCFEAFDGLVKY--WLTFNEIN 182 (474)
T ss_pred ----HhcCCCCCHHHHHHHHHHHHHHHHHhcCcCCe--EEeecchh
Confidence 0113466 678899999999999999997533 44789997
|
|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=3e-08 Score=107.80 Aligned_cols=115 Identities=20% Similarity=0.281 Sum_probs=88.6
Q ss_pred hhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 220 ~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
--+||+.| ++|++.|+++|+|+.|++|.|--+ .|.. +...++..++..+++|+.++++||..||+|||..-.+.-.
T Consensus 64 A~D~Yhry--~EDI~Lm~elG~~~yRfSIsWsRI-~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~ 140 (477)
T PRK15014 64 AVDFYGHY--KEDIKLFAEMGFKCFRTSIAWTRI-FPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLV 140 (477)
T ss_pred ccCccccc--HHHHHHHHHcCCCEEEecccceee-ccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHH
Confidence 34688877 999999999999999999997433 3432 2335778999999999999999999999998764322100
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.|.++.+.++++|++.-.. |=.+|||.
T Consensus 141 ------~~yGGW~n~~~~~~F~~Ya~~~f~~fgdrVk~--WiT~NEp~ 180 (477)
T PRK15014 141 ------QQYGSWTNRKVVDFFVRFAEVVFERYKHKVKY--WMTFNEIN 180 (477)
T ss_pred ------HhcCCCCChHHHHHHHHHHHHHHHHhcCcCCE--EEEecCcc
Confidence 0113465 678899999999999999997433 44789996
|
|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.1e-07 Score=95.44 Aligned_cols=120 Identities=19% Similarity=0.266 Sum_probs=82.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.|+..||++|+|+||+.- . | . =.+.++.|.++||.|+.++-...... +...+.. ....
T Consensus 39 ~~d~~l~k~~G~N~iR~~h-----~-p-----~-------~~~~~~~cD~~GilV~~e~~~~~~~~--~~~~~~~-~~~~ 97 (298)
T PF02836_consen 39 ERDLELMKEMGFNAIRTHH-----Y-P-----P-------SPRFYDLCDELGILVWQEIPLEGHGS--WQDFGNC-NYDA 97 (298)
T ss_dssp HHHHHHHHHTT-SEEEETT-----S---------------SHHHHHHHHHHT-EEEEE-S-BSCTS--SSSTSCT-SCTT
T ss_pred HHHHHHHHhcCcceEEccc-----c-c-----C-------cHHHHHHHhhcCCEEEEeccccccCc--cccCCcc-ccCC
Confidence 6899999999999999821 1 1 1 15778899999999999985421100 0001100 0000
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
-.+...+.+.+-++.+.+|+++||+|+.|.+.||+ ....+++++++.+|+.||+++|....
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~--------~~~~~~~~l~~~~k~~DptRpv~~~~ 158 (298)
T PF02836_consen 98 DDPEFRENAEQELREMVRRDRNHPSIIMWSLGNES--------DYREFLKELYDLVKKLDPTRPVTYAS 158 (298)
T ss_dssp TSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESS--------HHHHHHHHHHHHHHHH-TTSEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHcCcCcCchheeecCccC--------ccccchhHHHHHHHhcCCCCceeecc
Confidence 01455677888999999999999999999999999 45778899999999999999998764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-07 Score=102.90 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=102.5
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.||++|+|+.|+.|.|- ...|...+++++..++..+++|+.++++||..||+||+..-.+.-
T Consensus 49 ~d~yhry--~eDi~L~~~lG~~~yRfSIsWs-RI~P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L--- 122 (467)
T TIGR01233 49 SDFYHKY--PVDLELAEEYGVNGIRISIAWS-RIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL--- 122 (467)
T ss_pred CchhhhH--HHHHHHHHHcCCCEEEEecchh-hccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEeccCCCCcHHH---
Confidence 4577777 8999999999999999999974 445543346778899999999999999999999999987422210
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC------------CC-C-h-H------HHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------------GV-A-L-D------TLKSYY 358 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~------------~~-~-~-~------~~~~~~ 358 (534)
.....|. ++..+.|.++-+.++++|++ |--|=.+|||... +. . . . .+..-.
T Consensus 123 ----~~~GGW~n~~~v~~F~~YA~~~f~~fgd---Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~a~hn~l~AH 195 (467)
T TIGR01233 123 ----HSNGDFLNRENIEHFIDYAAFCFEEFPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSH 195 (467)
T ss_pred ----HHcCCCCCHHHHHHHHHHHHHHHHHhCC---CCEEEEecchhhhhhccchhcccCCCccchhHHHHHHHHHHHHHH
Confidence 0123466 78899999999999999996 3235578999841 11 1 0 1 122335
Q ss_pred HHHHHHHHhcCCceE
Q 009475 359 KAGYDAVRKYTSTAY 373 (534)
Q Consensus 359 ~~~~~aIR~~~p~~~ 373 (534)
.++++++|+..++..
T Consensus 196 a~A~~~~~~~~~~~~ 210 (467)
T TIGR01233 196 ARAVKLYKDKGYKGE 210 (467)
T ss_pred HHHHHHHHHhCCCCe
Confidence 667888888777643
|
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation. |
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.8e-08 Score=103.03 Aligned_cols=149 Identities=15% Similarity=0.154 Sum_probs=108.2
Q ss_pred hhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-----CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCC
Q 009475 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS 294 (534)
Q Consensus 220 ~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-----~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~ 294 (534)
+-.||.+-..++|++.++.+|++.+|+- +.|..+ +....+..+.+++..++.|..++|+|+|.+-.
T Consensus 19 mw~~~~~~ei~~dle~a~~vg~k~lR~f-----iLDgEdc~d~~G~~na~s~~~y~~~fla~a~~l~lkvlitliv---- 89 (587)
T COG3934 19 MWPAIGNREIKADLEPAGFVGVKDLRLF-----ILDGEDCRDKEGYRNAGSNVWYAAWFLAPAGYLDLKVLITLIV---- 89 (587)
T ss_pred HHHHhhhhhhhcccccccCccceeEEEE-----EecCcchhhhhceecccccHHHHHHHhhhcccCcceEEEEEee----
Confidence 3345554445788889999999999993 233221 11222334999999999999999999998742
Q ss_pred CCCCCCCCCCCCCCCC-----------ChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC-CCCChHHHHHHHHHHH
Q 009475 295 QNGNEHSATRDGFQEW-----------GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA-PGVALDTLKSYYKAGY 362 (534)
Q Consensus 295 qng~~~sg~~~g~~~W-----------~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~-~~~~~~~~~~~~~~~~ 362 (534)
+++|.|.+.-...| .+..+....++.+.|.+.||-+|+|+++++-|||.. ...+...+..|...++
T Consensus 90 --g~~hmgg~Nw~Ipwag~~~pdn~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~p~s~N~f~~w~~emy 167 (587)
T COG3934 90 --GLKHMGGTNWRIPWAGEQSPDNVIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEAPISVNNFWDWSGEMY 167 (587)
T ss_pred --cccccCcceeEeecCCCCCccccccchhhcccHHHHHHHHhhhhccChHHHHHHhcCCccccccCChhHHHHHHHHHH
Confidence 11121111111111 134455678899999999999999999999999886 3456788999999999
Q ss_pred HHHHhcCCceEEEEeCC
Q 009475 363 DAVRKYTSTAYVIMSNR 379 (534)
Q Consensus 363 ~aIR~~~p~~~Iiv~~~ 379 (534)
..|+..||+|+|-+++.
T Consensus 168 ~yiK~ldd~hlvsvGD~ 184 (587)
T COG3934 168 AYIKWLDDGHLVSVGDP 184 (587)
T ss_pred HHhhccCCCCeeecCCc
Confidence 99999999999998863
|
|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.2e-07 Score=100.73 Aligned_cols=140 Identities=18% Similarity=0.218 Sum_probs=101.8
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCC-CCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK-PFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~-~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
-+||..| ++|++.+|++|+|+.|+.|.|--.+ |.+.. ...+..++..+++++.|.++||..+|+|||..-.+.-.+
T Consensus 55 ~d~YhrY--keDi~L~~emG~~~~R~SI~WsRIf-P~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~Hfd~P~~L~~ 131 (460)
T COG2723 55 SDFYHRY--KEDIALAKEMGLNAFRTSIEWSRIF-PNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLYHFDLPLWLQK 131 (460)
T ss_pred cchhhhh--HHHHHHHHHcCCCEEEeeeeEEEee-cCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecccCCcHHHhh
Confidence 3567767 8999999999999999999974333 33322 567789999999999999999999999999853221111
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-------------CChH-------HHHHHH
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-------------VALD-------TLKSYY 358 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~-------------~~~~-------~~~~~~ 358 (534)
....|. ....+.+.++-+.+++||+|.-. -|=.+|||.... ...+ ...-..
T Consensus 132 ------~ygGW~nR~~i~~F~~ya~~vf~~f~dkVk--~W~TFNE~n~~~~~~y~~~~~~p~~~~~~~~~qa~hh~~lA~ 203 (460)
T COG2723 132 ------PYGGWENRETVDAFARYAATVFERFGDKVK--YWFTFNEPNVVVELGYLYGGHPPGIVDPKAAYQVAHHMLLAH 203 (460)
T ss_pred ------ccCCccCHHHHHHHHHHHHHHHHHhcCcce--EEEEecchhhhhcccccccccCCCccCHHHHHHHHHHHHHHH
Confidence 112566 68889999999999999999643 355789998521 1111 111223
Q ss_pred HHHHHHHHhcCCc
Q 009475 359 KAGYDAVRKYTST 371 (534)
Q Consensus 359 ~~~~~aIR~~~p~ 371 (534)
..+++++|+..|+
T Consensus 204 A~avk~~~~~~~~ 216 (460)
T COG2723 204 ALAVKAIKKINPK 216 (460)
T ss_pred HHHHHHHHhhCCc
Confidence 5578889999887
|
|
| >PF06229 FRG1: FRG1-like family; InterPro: IPR010414 This entry represents Frg1 (FSHD region gene 1), a protein that is considered to be a candidate for facioscapulohumeral muscular dystrophy (FSHD) | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.5e-08 Score=92.79 Aligned_cols=82 Identities=24% Similarity=0.358 Sum_probs=51.4
Q ss_pred ccceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEe-eCCcEEEeecCCCCceEEEeecCCCC
Q 009475 64 DGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRV-NNKQFIGLENQGQGNGLVAVSNTAGY 142 (534)
Q Consensus 64 ~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~-~n~~~v~~~~~g~~~~~~a~~~~~~~ 142 (534)
+.++|+||| .+|+|||++.-| .|+|+++++|++|+|+++..++ +.++-. .|++|++++.. +. |+|++.++|.
T Consensus 37 ~~~~iafKs-~~GkYLs~Dk~G--~v~a~sdAiGp~E~f~~V~~~~-~~a~~~~~~~~FLs~~~~--~~-i~a~s~~a~~ 109 (191)
T PF06229_consen 37 GDEKIAFKS-GHGKYLSCDKDG--IVSARSDAIGPQEQFEPVFQDG-KPALFSSSNNKFLSVDEE--GD-IRADSKTAGE 109 (191)
T ss_dssp SSS-EEEEE-TTS-BEEE-SSS--BEEE--SS--TTTBEEEE-STT---EEEE-TTS-BEEE-SS--S--EEE--S---T
T ss_pred CCCceEeec-cCccEEEEcCCC--cEEEEeecCCCceEEEEEECCC-CeEEEecCCCeEEEEecc--cC-eeeccccCCC
Confidence 447899999 699999999877 8999999999999999998755 555555 89999999975 33 9999999999
Q ss_pred CceEEEEEeC
Q 009475 143 SETFQIVRKD 152 (534)
Q Consensus 143 ~EtF~ivr~~ 152 (534)
.|.++|--+.
T Consensus 110 ~e~~~iR~~~ 119 (191)
T PF06229_consen 110 NEMIKIRSDA 119 (191)
T ss_dssp TT--EEEE-S
T ss_pred CceEEEEEec
Confidence 9988876654
|
FSHD is a dominant neuromuscular disorder caused by deletions in a number of tandem repeat units (called D4Z4) located on chromosome 4q35. D4Z4 contains a transcriptional silencer whose deletion causes the over-expression in skeletal muscle of 4q35 genes, including Frg1 [, ]. Frg1 is localised to nucleoli and appears to be a component of the human spliceosome, but its exact function is unknown [].; PDB: 2YUG_A. |
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.7e-08 Score=104.05 Aligned_cols=142 Identities=19% Similarity=0.248 Sum_probs=99.5
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
-+||+.| ++|++.||++|+|+.|+.|.| ....|.+ ...+++..++..+++|+.++++||..||+||+..-.+.
T Consensus 54 ~d~y~~y--~eDi~l~~~lg~~~yRfsi~W-~Ri~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~~~P~~--- 127 (455)
T PF00232_consen 54 CDHYHRY--KEDIALMKELGVNAYRFSISW-SRIFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYHFDLPLW--- 127 (455)
T ss_dssp TGHHHHH--HHHHHHHHHHT-SEEEEE--H-HHHSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS--BHH---
T ss_pred ccchhhh--hHHHHHHHhhccceeeeecch-hheeecccccccCHhHhhhhHHHHHHHHhhccceeeeeeecccccc---
Confidence 4566666 899999999999999999997 4455654 45677889999999999999999999999998621100
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC------------C-CC-------hHHHHHHH
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------------G-VA-------LDTLKSYY 358 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~------------~-~~-------~~~~~~~~ 358 (534)
......|. +...+.+.++-+.++++|++.-.. |=.+|||... + .+ ...+....
T Consensus 128 ----l~~~ggw~~~~~~~~F~~Ya~~~~~~~gd~V~~--w~T~NEp~~~~~~~y~~g~~~p~~~~~~~~~~~~h~~l~AH 201 (455)
T PF00232_consen 128 ----LEDYGGWLNRETVDWFARYAEFVFERFGDRVKY--WITFNEPNVFALLGYLYGGFPPGRDSLKAFYQAAHNLLLAH 201 (455)
T ss_dssp ----HHHHTGGGSTHHHHHHHHHHHHHHHHHTTTBSE--EEEEETHHHHHHHHHTSSSSTTCSSTHHHHHHHHHHHHHHH
T ss_pred ----eeecccccCHHHHHHHHHHHHHHHHHhCCCcce--EEeccccceeeccccccccccccccccchhhHHHhhHHHHH
Confidence 00012354 688899999999999999996443 4478999841 1 11 12234456
Q ss_pred HHHHHHHHhcCCceEE
Q 009475 359 KAGYDAVRKYTSTAYV 374 (534)
Q Consensus 359 ~~~~~aIR~~~p~~~I 374 (534)
.++++++|+..++..|
T Consensus 202 a~A~~~~~~~~~~~~I 217 (455)
T PF00232_consen 202 AKAVKAIKEKYPDGKI 217 (455)
T ss_dssp HHHHHHHHHHTCTSEE
T ss_pred HHHHHHHhhcccceEE
Confidence 7788999998876554
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >PF06229 FRG1: FRG1-like family; InterPro: IPR010414 This entry represents Frg1 (FSHD region gene 1), a protein that is considered to be a candidate for facioscapulohumeral muscular dystrophy (FSHD) | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.4e-07 Score=88.45 Aligned_cols=99 Identities=19% Similarity=0.248 Sum_probs=57.8
Q ss_pred EeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEe-cCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCceEEE
Q 009475 70 FMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRV-NETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQI 148 (534)
Q Consensus 70 ~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~-~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~EtF~i 148 (534)
|.++.+|.+.+||.=. .....++.|.|...++ ++++|+||+++|+|++||.. +.|+|+++++|+.|+|++
T Consensus 4 i~a~d~G~~t~~ePhd------~~~~p~p~qV~va~~v~~~~~iafKs~~GkYLs~Dk~---G~v~a~sdAiGp~E~f~~ 74 (191)
T PF06229_consen 4 IEALDNGLFTTGEPHD------VGEGPDPRQVWVATRVPGDEKIAFKSGHGKYLSCDKD---GIVSARSDAIGPQEQFEP 74 (191)
T ss_dssp EEE-TTS-EEE----S------SS----TTT-EEEEE--SSS-EEEEETTS-BEEE-SS---SBEEE--SS--TTTBEEE
T ss_pred eeeeccCCccccCCCc------CCCCCChhHeEEEEEecCCCceEeeccCccEEEEcCC---CcEEEEeecCCCceEEEE
Confidence 5667788888887732 1345568999999999 89999999999999999974 369999999999999999
Q ss_pred EEeCCCCceEEEEe-cCCceEEecccceeecCC
Q 009475 149 VRKDGDSSRVRLSA-SNGMFIQAISETRLTADY 180 (534)
Q Consensus 149 vr~~~~~~~v~i~~-~nG~~Lq~~g~~~v~ad~ 180 (534)
|..++. +.+.. .|+.||.++...-+.++-
T Consensus 75 V~~~~~---~a~~~~~~~~FLs~~~~~~i~a~s 104 (191)
T PF06229_consen 75 VFQDGK---PALFSSSNNKFLSVDEEGDIRADS 104 (191)
T ss_dssp E-STT-----EEEE-TTS-BEEE-SSS-EEE--
T ss_pred EECCCC---eEEEecCCCeEEEEecccCeeecc
Confidence 997654 44455 899999987522244443
|
FSHD is a dominant neuromuscular disorder caused by deletions in a number of tandem repeat units (called D4Z4) located on chromosome 4q35. D4Z4 contains a transcriptional silencer whose deletion causes the over-expression in skeletal muscle of 4q35 genes, including Frg1 [, ]. Frg1 is localised to nucleoli and appears to be a component of the human spliceosome, but its exact function is unknown [].; PDB: 2YUG_A. |
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.2e-07 Score=103.13 Aligned_cols=138 Identities=18% Similarity=0.238 Sum_probs=101.4
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||+.| ++|++.||++|+|+.|+.|.|- ...|+..+++++..++..+++|+.++++||..+|+||+..-.+.-.
T Consensus 50 ~d~Y~ry--~eDi~L~~~lG~~~yRfSIsWs-RI~P~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L~-- 124 (469)
T PRK13511 50 SDFYHRY--PEDLKLAEEFGVNGIRISIAWS-RIFPDGYGEVNPKGVEYYHRLFAECHKRHVEPFVTLHHFDTPEALH-- 124 (469)
T ss_pred cchhhhh--HHHHHHHHHhCCCEEEeeccHh-hcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCcHHHH--
Confidence 4577777 9999999999999999999974 4445433467788999999999999999999999999874322100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC------------CCC--h-H------HHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------------GVA--L-D------TLKSYY 358 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~------------~~~--~-~------~~~~~~ 358 (534)
....|. ++..+.|.++-+.++++|+| -.. |=.+|||... +.. . . .+....
T Consensus 125 -----~~GGW~n~~~v~~F~~YA~~~~~~fgd-Vk~--W~T~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~hn~llAH 196 (469)
T PRK13511 125 -----SNGDWLNRENIDHFVRYAEFCFEEFPE-VKY--WTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVAH 196 (469)
T ss_pred -----HcCCCCCHHHHHHHHHHHHHHHHHhCC-CCE--EEEccchhhhhhcchhhcccCCCCCccHHHHHHHHHHHHHHH
Confidence 112466 77889999999999999999 432 4578999741 111 1 1 122335
Q ss_pred HHHHHHHHhcCCc
Q 009475 359 KAGYDAVRKYTST 371 (534)
Q Consensus 359 ~~~~~aIR~~~p~ 371 (534)
.++++++|+..++
T Consensus 197 a~A~~~~~~~~~~ 209 (469)
T PRK13511 197 ARAVKLFKDKGYK 209 (469)
T ss_pred HHHHHHHHHhCCC
Confidence 6678888887665
|
|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-07 Score=102.79 Aligned_cols=116 Identities=25% Similarity=0.316 Sum_probs=89.6
Q ss_pred hhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 220 ~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
--+||..| ++|++.||++|+|+.|+.|.|- ...|+..++++++.++..+++|+.+.++||..+|+||+..-.+.-.
T Consensus 77 a~D~Yhry--~EDi~lmk~lG~~~YRfSIsWs-RI~P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~H~dlP~~L~- 152 (497)
T PLN02998 77 ACDQYHKY--KEDVKLMADMGLEAYRFSISWS-RLLPSGRGPINPKGLQYYNNLIDELITHGIQPHVTLHHFDLPQALE- 152 (497)
T ss_pred cccHHHhh--HHHHHHHHHcCCCeEEeeccHH-hcCcCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHHH-
Confidence 34577777 8999999999999999999974 4445433457788999999999999999999999999874221100
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+....|. ++..+.|.++-+.+.++|+|.-.. |=.+|||..
T Consensus 153 -----~~yGGW~n~~~v~~F~~YA~~~~~~fgdrVk~--WiT~NEP~~ 193 (497)
T PLN02998 153 -----DEYGGWLSQEIVRDFTAYADTCFKEFGDRVSH--WTTINEVNV 193 (497)
T ss_pred -----HhhCCcCCchHHHHHHHHHHHHHHHhcCcCCE--EEEccCcch
Confidence 0013465 678899999999999999996433 347899984
|
|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.4e-07 Score=103.11 Aligned_cols=114 Identities=22% Similarity=0.299 Sum_probs=88.4
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 301 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s 301 (534)
+||..| ++|++.||++|+|+.|+.|.| ....|+..++++++.++..+++|+.+.++||..+|+|||..-.+.-.
T Consensus 76 D~YhrY--~eDI~Lm~~lG~~aYRfSIsW-sRI~P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL~H~dlP~~L~--- 149 (503)
T PLN02849 76 DGYHKY--KEDVKLMVETGLDAFRFSISW-SRLIPNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTLFHYDHPQYLE--- 149 (503)
T ss_pred cHHHhH--HHHHHHHHHcCCCeEEEeccH-HhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeecCCCCcHHHH---
Confidence 466666 899999999999999999997 44455443467888999999999999999999999999873221000
Q ss_pred CCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 302 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 302 g~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+....|. ++..+.|.++-+.++++|+|.-.. |=.+|||..
T Consensus 150 ---~~yGGW~nr~~v~~F~~YA~~~f~~fgDrVk~--WiT~NEP~~ 190 (503)
T PLN02849 150 ---DDYGGWINRRIIKDFTAYADVCFREFGNHVKF--WTTINEANI 190 (503)
T ss_pred ---HhcCCcCCchHHHHHHHHHHHHHHHhcCcCCE--EEEecchhh
Confidence 0013465 678899999999999999997433 346899984
|
|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.8e-07 Score=102.36 Aligned_cols=115 Identities=20% Similarity=0.262 Sum_probs=88.9
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||+.| ++|++.||++|+|+.|+.|.|- ...|+..++++++.++..+++|+.+.++||..+|+|||..-.+.-.
T Consensus 73 ~D~Yhry--~EDI~L~k~lG~~ayRfSIsWs-RI~P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H~dlP~~L~-- 147 (504)
T PLN02814 73 SDGYHKY--KEDVKLMAEMGLESFRFSISWS-RLIPNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLYHYDLPQSLE-- 147 (504)
T ss_pred ccHHHhh--HHHHHHHHHcCCCEEEEeccHh-hcCcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHHH--
Confidence 3567666 8999999999999999999974 4445433467888999999999999999999999999873221100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+....|. ++..+.|.++-+.++++|+|.-.. |=.+|||..
T Consensus 148 ----~~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~--WiT~NEP~~ 188 (504)
T PLN02814 148 ----DEYGGWINRKIIEDFTAFADVCFREFGEDVKL--WTTINEATI 188 (504)
T ss_pred ----HhcCCcCChhHHHHHHHHHHHHHHHhCCcCCE--EEeccccch
Confidence 0113466 678899999999999999997433 447899984
|
|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.1e-07 Score=100.00 Aligned_cols=115 Identities=17% Similarity=0.258 Sum_probs=88.4
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
-+||..| ++|++.||++|+|+.|+.|.| ....|.. +..++++.++..+++|+.+.++||..+|+||+..-.+.-.
T Consensus 69 ~d~Yhry--~eDi~Lm~~lG~~aYRfSIsW-sRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H~dlP~~L~- 144 (478)
T PRK09593 69 IDMYHHY--KEDIALFAEMGFKTYRMSIAW-TRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTITHFDCPMHLI- 144 (478)
T ss_pred cchHHhh--HHHHHHHHHcCCCEEEEecch-hhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecccCCCHHHH-
Confidence 4577777 999999999999999999997 3444542 2346778999999999999999999999999874222100
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+....|. ++..+.|.++-+.++++|++.-.. |=.+|||..
T Consensus 145 -----~~~GGW~n~~~v~~F~~YA~~~~~~fgdrVk~--WiT~NEP~~ 185 (478)
T PRK09593 145 -----EEYGGWRNRKMVGFYERLCRTLFTRYKGLVKY--WLTFNEINM 185 (478)
T ss_pred -----hhcCCCCChHHHHHHHHHHHHHHHHhcCcCCE--EEeecchhh
Confidence 0113466 677899999999999999997433 347899973
|
|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.8e-07 Score=100.30 Aligned_cols=115 Identities=18% Similarity=0.250 Sum_probs=87.8
Q ss_pred hhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 220 ~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
--+||+.| ++|++.||++|+|+.|+.|.|- ...|+. +...++..++..+++|+.+.++||..+|+||+..-.+.-.
T Consensus 62 a~D~Yhry--~eDi~Lm~~lG~~~yRfSIsWs-RI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~H~dlP~~L~ 138 (476)
T PRK09589 62 AIDFYHRY--KEDIALFAEMGFKCFRTSIAWT-RIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLSHFEMPYHLV 138 (476)
T ss_pred cccHHHhh--HHHHHHHHHcCCCEEEeccchh-hcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCCHHHH
Confidence 34577777 8999999999999999999974 444542 2235778999999999999999999999999874222100
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. ++..+.|.++-+.++++|+|.-.. |=.+|||.
T Consensus 139 ------~~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~--WiT~NEp~ 178 (476)
T PRK09589 139 ------TEYGGWRNRKLIDFFVRFAEVVFTRYKDKVKY--WMTFNEIN 178 (476)
T ss_pred ------HhcCCcCChHHHHHHHHHHHHHHHHhcCCCCE--EEEecchh
Confidence 0113465 677899999999999999996433 34789996
|
|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.7e-05 Score=77.15 Aligned_cols=127 Identities=17% Similarity=0.251 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-----hhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 009475 266 SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLAARYANRPSLAAIEL 340 (534)
Q Consensus 266 ~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~-----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL 340 (534)
.++.+|+++++|+++||+| ..|..- +++ ..|.|. +...+.+.++.+.+++||++. |..+|+
T Consensus 14 n~~~~D~~~~~a~~~gi~v--~gH~l~------W~~----~~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~--i~~wdV 79 (254)
T smart00633 14 NFSGADAIVNFAKENGIKV--RGHTLV------WHS----QTPDWVFNLSKETLLARLENHIKTVVGRYKGK--IYAWDV 79 (254)
T ss_pred ChHHHHHHHHHHHHCCCEE--EEEEEe------ecc----cCCHhhhcCCHHHHHHHHHHHHHHHHHHhCCc--ceEEEE
Confidence 5889999999999999998 344321 011 122343 244667889999999999986 677999
Q ss_pred ccCCCCCCCC---hHHH-----HHHHHHHHHHHHhcCCceEEEEeCC-CCCC--Chhhhhc-------ccCCCceEEEEE
Q 009475 341 INEPLAPGVA---LDTL-----KSYYKAGYDAVRKYTSTAYVIMSNR-LGPA--DHKELLS-------FASGLSRVVIDV 402 (534)
Q Consensus 341 ~NEP~~~~~~---~~~~-----~~~~~~~~~aIR~~~p~~~Iiv~~~-~~~~--~~~~~~~-------~~~~~~nvv~d~ 402 (534)
+|||...+.. ...| .+|+..+++++|+++|+..+++.+. ..+. ....++. -..+.+.|-+..
T Consensus 80 ~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Ndy~~~~~~~k~~~~~~~v~~l~~~g~~iDgiGlQ~ 159 (254)
T smart00633 80 VNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYNDYNTEEPNAKRQAIYELVKKLKAKGVPIDGIGLQS 159 (254)
T ss_pred eeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEeccCCcCccHHHHHHHHHHHHHHHCCCccceeeeee
Confidence 9999864311 0122 2788999999999999999998751 1111 0111111 113457788888
Q ss_pred eecc
Q 009475 403 HYYN 406 (534)
Q Consensus 403 H~Y~ 406 (534)
|.+.
T Consensus 160 H~~~ 163 (254)
T smart00633 160 HLSL 163 (254)
T ss_pred eecC
Confidence 8763
|
|
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.6e-06 Score=93.31 Aligned_cols=185 Identities=20% Similarity=0.262 Sum_probs=103.3
Q ss_pred eeeecccCCCcchhhhhhccCCCCCHHHHHHHH-hCCccEEEeCcccccccCCCCCCCCC----Cc----hHHHHHHHHH
Q 009475 205 YQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFV----GG----SSKVLDNAFD 275 (534)
Q Consensus 205 ~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~VRIPv~~w~~~~~~~~~~~~----~~----~l~~ld~~v~ 275 (534)
|..|- |...|...++..| .+.+..++ +.||..||+. +++.++ -. .+. ++ .+..||++++
T Consensus 24 W~~~~--~~g~a~~~l~~~~-----q~~l~~~~~~~gf~yvR~h---~l~~dd-m~-~~~~~~~~~~~~Ynf~~lD~i~D 91 (486)
T PF01229_consen 24 WRFCV--GSGRANLLLRADW-----QEQLRELQEELGFRYVRFH---GLFSDD-MM-VYSESDEDGIPPYNFTYLDQILD 91 (486)
T ss_dssp GGSEE--EES-GGGGGBHHH-----HHHHHHHHCCS--SEEEES----TTSTT-TT--EEEEETTEEEEE--HHHHHHHH
T ss_pred hhhhc--CCCchHHHhhHHH-----HHHHHHHHhccCceEEEEE---eeccCc-hh-hccccccCCCCcCChHHHHHHHH
Confidence 44443 3345777888888 56777775 7999999992 333221 10 110 11 5999999999
Q ss_pred HHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-----hhhHHHHHHHHHHHHHHhcCC-----CeEEEEEeccCCC
Q 009475 276 WAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLAARYANR-----PSLAAIELINEPL 345 (534)
Q Consensus 276 ~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~-----~~~~~~~~~~w~~lA~ryk~~-----~~vlg~eL~NEP~ 345 (534)
...++||+.+|.|--.|..-. ++.. ....|. +...+++.++.+.+++||.+. -.-.-||+.|||.
T Consensus 92 ~l~~~g~~P~vel~f~p~~~~----~~~~-~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiWNEPd 166 (486)
T PF01229_consen 92 FLLENGLKPFVELGFMPMALA----SGYQ-TVFWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIWNEPD 166 (486)
T ss_dssp HHHHCT-EEEEEE-SB-GGGB----SS---EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEESS-TT
T ss_pred HHHHcCCEEEEEEEechhhhc----CCCC-ccccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEEeCcCCC
Confidence 999999999999976653211 1100 011111 456677777777777766432 1123599999998
Q ss_pred CCC----CChHHHHHHHHHHHHHHHhcCCceEEEEeC--CCCCCC-hhhhhccc--CCCceEEEEEeeccc
Q 009475 346 APG----VALDTLKSYYKAGYDAVRKYTSTAYVIMSN--RLGPAD-HKELLSFA--SGLSRVVIDVHYYNL 407 (534)
Q Consensus 346 ~~~----~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~--~~~~~~-~~~~~~~~--~~~~nvv~d~H~Y~~ 407 (534)
... ...+++.++|+..+++||+++|...|- ++ .++... ...++.+. ...+--.+++|.|..
T Consensus 167 ~~~f~~~~~~~ey~~ly~~~~~~iK~~~p~~~vG-Gp~~~~~~~~~~~~~l~~~~~~~~~~DfiS~H~y~~ 236 (486)
T PF01229_consen 167 LKDFWWDGTPEEYFELYDATARAIKAVDPELKVG-GPAFAWAYDEWCEDFLEFCKGNNCPLDFISFHSYGT 236 (486)
T ss_dssp STTTSGGG-HHHHHHHHHHHHHHHHHH-TTSEEE-EEEEETT-THHHHHHHHHHHHCT---SEEEEEEE-B
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHhCCCCccc-CccccccHHHHHHHHHHHHhcCCCCCCEEEEEeccc
Confidence 742 234678899999999999999987653 33 222111 13333322 223445789999953
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.7e-07 Score=74.59 Aligned_cols=78 Identities=22% Similarity=0.323 Sum_probs=48.8
Q ss_pred HHHHhcCCCeEEEEEeccC-CCCC---------CCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhcccCC
Q 009475 325 LAARYANRPSLAAIELINE-PLAP---------GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASG 394 (534)
Q Consensus 325 lA~ryk~~~~vlg~eL~NE-P~~~---------~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~~~~ 394 (534)
|.++|++++.|+++||.|| |... ....+.+.+|++++.+.||+++|+++|..+. +. .....+.... .
T Consensus 1 iv~~~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pvt~g~-~~-~~~~~~~~~~-~ 77 (88)
T PF12876_consen 1 IVTRFGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPVTSGF-WG-GDWEDLEQLQ-A 77 (88)
T ss_dssp -HHHTT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-EE--B----S-TTHHHHS---
T ss_pred CchhhcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcEEeec-cc-CCHHHHHHhc-h
Confidence 4578999999999999999 7721 1124778999999999999999999988752 32 2222333332 2
Q ss_pred CceEEEEEeec
Q 009475 395 LSRVVIDVHYY 405 (534)
Q Consensus 395 ~~nvv~d~H~Y 405 (534)
..--++++|.|
T Consensus 78 ~~~DvisfH~Y 88 (88)
T PF12876_consen 78 ENLDVISFHPY 88 (88)
T ss_dssp TT-SSEEB-EE
T ss_pred hcCCEEeeecC
Confidence 34568999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B. |
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00012 Score=68.68 Aligned_cols=137 Identities=23% Similarity=0.274 Sum_probs=96.0
Q ss_pred HHHHHHHHhCCccEEEeCcc-ccc-ccCCCC--CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVG-WWI-ANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 305 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~-~w~-~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~ 305 (534)
+++|+.|++.|+++|=|-.. +.. ...|.. +..+....-+.|+.+++.|.++||+|.+.|...|.... .
T Consensus 23 ~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~~~~w~----~---- 94 (166)
T PF14488_consen 23 REEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFDPDYWD----Q---- 94 (166)
T ss_pred HHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCCchhhh----c----
Confidence 78999999999999966421 110 001110 01122345678999999999999999999987653311 1
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCC
Q 009475 306 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 380 (534)
Q Consensus 306 g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~ 380 (534)
+...| ..+....+.+.|+++|+++|++.|+=|-.|+.... ..-...++.+.+.++++.++.+|+|++.+
T Consensus 95 ~~~~~---~~~~~~~v~~el~~~yg~h~sf~GWYip~E~~~~~---~~~~~~~~~l~~~lk~~s~~~Pv~ISpf~ 163 (166)
T PF14488_consen 95 GDLDW---EAERNKQVADELWQRYGHHPSFYGWYIPYEIDDYN---WNAPERFALLGKYLKQISPGKPVMISPFI 163 (166)
T ss_pred cCHHH---HHHHHHHHHHHHHHHHcCCCCCceEEEecccCCcc---cchHHHHHHHHHHHHHhCCCCCeEEecCc
Confidence 11222 33445568889999999999999999999998632 23366777888888888889999998643
|
|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00011 Score=87.28 Aligned_cols=112 Identities=19% Similarity=0.218 Sum_probs=81.4
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc----CCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGSQNGNEHSATRD 305 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl----H~~pG~qng~~~sg~~~ 305 (534)
+.||+.||++|+|+||+. +. | .. .+..+.|.++||+|+-+. |+.... +...
T Consensus 374 ~~di~lmK~~g~NaVR~s-----Hy-P--~~----------p~fydlcDe~GilV~dE~~~e~hg~~~~-------~~~~ 428 (1027)
T PRK09525 374 VQDILLMKQHNFNAVRCS-----HY-P--NH----------PLWYELCDRYGLYVVDEANIETHGMVPM-------NRLS 428 (1027)
T ss_pred HHHHHHHHHCCCCEEEec-----CC-C--CC----------HHHHHHHHHcCCEEEEecCccccCCccc-------cCCC
Confidence 568999999999999992 11 1 11 456899999999999885 332100 0000
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 306 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 306 g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
.. +...+.+.+-++.+.+|.++||.|+.|.+.||+.. + ....++++.+|+.||+++|...+
T Consensus 429 ~d----p~~~~~~~~~~~~mV~RdrNHPSIi~WSlgNE~~~-g-------~~~~~l~~~~k~~DptRpV~y~~ 489 (1027)
T PRK09525 429 DD----PRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGH-G-------ANHDALYRWIKSNDPSRPVQYEG 489 (1027)
T ss_pred CC----HHHHHHHHHHHHHHHHhCCCCCEEEEEeCccCCCc-C-------hhHHHHHHHHHhhCCCCcEEECC
Confidence 11 23456677778999999999999999999999863 1 11467888999999999998864
|
|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.1e-05 Score=78.68 Aligned_cols=136 Identities=20% Similarity=0.249 Sum_probs=82.1
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++-++.||++|+|+|-++|.|- .-+|.++ .|+=.....|++.++.|+++||+|||-.=-+- ++....| |.|.
T Consensus 27 ~~~l~k~ka~G~n~v~~yv~W~-~he~~~g-~~df~g~~dl~~f~~~a~~~gl~vilrpGpyi---~aE~~~g---G~P~ 98 (319)
T PF01301_consen 27 RDRLQKMKAAGLNTVSTYVPWN-LHEPEEG-QFDFTGNRDLDRFLDLAQENGLYVILRPGPYI---CAEWDNG---GLPA 98 (319)
T ss_dssp HHHHHHHHHTT-SEEEEE--HH-HHSSBTT-B---SGGG-HHHHHHHHHHTT-EEEEEEES------TTBGGG---G--G
T ss_pred HHHHHHHHhCCcceEEEecccc-ccCCCCC-cccccchhhHHHHHHHHHHcCcEEEeccccee---cccccch---hhhh
Confidence 7899999999999999999874 4455443 56544557799999999999999998742211 1111111 3344
Q ss_pred CC------------hhhHHHHHHHHHHHHHHhcC-----CCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCce
Q 009475 310 WG------------DSNVADTVAVIDFLAARYAN-----RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 310 W~------------~~~~~~~~~~w~~lA~ryk~-----~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
|. +...+...+.++.|++..+. -..|+++++=||..... .-.+|++.+.++.|+...+.
T Consensus 99 Wl~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~GGpII~vQvENEyg~~~----~~~~Y~~~l~~~~~~~g~~~ 174 (319)
T PF01301_consen 99 WLLRKPDIRLRTNDPPFLEAVERWYRALAKIIKPLQYTNGGPIIMVQVENEYGSYG----TDRAYMEALKDAYRDWGIDP 174 (319)
T ss_dssp GGGGSTTS-SSSS-HHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEEESSSGGCTS----S-HHHHHHHHHHHHHTT-SS
T ss_pred hhhccccccccccchhHHHHHHHHHHHHHHHHHhhhhcCCCceehhhhhhhhCCCc----ccHhHHHHHHHHHHHhhCcc
Confidence 42 34455555666666665443 24688899999987322 23677777788888877774
Q ss_pred EEEEe
Q 009475 373 YVIMS 377 (534)
Q Consensus 373 ~Iiv~ 377 (534)
++...
T Consensus 175 ~~~~t 179 (319)
T PF01301_consen 175 VLLYT 179 (319)
T ss_dssp SBEEE
T ss_pred ceeec
Confidence 44443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.3e-05 Score=76.95 Aligned_cols=136 Identities=13% Similarity=0.126 Sum_probs=80.7
Q ss_pred HHHHHHHHhCCccEEEeCcccc-ccc-CC--CC--------CC-----CCCCchHHHHHHHHHHHHHCCCEEEEE-cCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWW-IAN-DP--TP--------PK-----PFVGGSSKVLDNAFDWAEKYGVKVIVD-LHAA 291 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w-~~~-~~--~~--------~~-----~~~~~~l~~ld~~v~~a~~~Gl~VIlD-lH~~ 291 (534)
+..++..|+.|||+||+-+--. ... .+ .+ +. ...+.+++.+|++|+.|.++||.+-|= +|+.
T Consensus 33 ~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~ 112 (289)
T PF13204_consen 33 EQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFTRPNPAYFDHLDRRIEKANELGIEAALVPFWGC 112 (289)
T ss_dssp HHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------TT----HHHHHHHHHHHHHHTT-EEEEESS-HH
T ss_pred HHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEEECC
Confidence 4567888999999999866421 111 00 00 01 134679999999999999999998554 5522
Q ss_pred CCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCc
Q 009475 292 PGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 371 (534)
Q Consensus 292 pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 371 (534)
+.. .+.+..+.. .-..+....+++.|++||+..|+|+ +-|-||=.. ...-.+.++++.+.||+.+|.
T Consensus 113 ~~~-~~~Wg~~~~-------~m~~e~~~~Y~~yv~~Ry~~~~Nvi-W~l~gd~~~----~~~~~~~w~~~~~~i~~~dp~ 179 (289)
T PF13204_consen 113 PYV-PGTWGFGPN-------IMPPENAERYGRYVVARYGAYPNVI-WILGGDYFD----TEKTRADWDAMARGIKENDPY 179 (289)
T ss_dssp HHH--------TT-------SS-HHHHHHHHHHHHHHHTT-SSEE-EEEESSS------TTSSHHHHHHHHHHHHHH--S
T ss_pred ccc-ccccccccc-------CCCHHHHHHHHHHHHHHHhcCCCCE-EEecCccCC----CCcCHHHHHHHHHHHHhhCCC
Confidence 210 011111100 1346788899999999999999988 889999721 123356677888999999998
Q ss_pred eEEEEeC
Q 009475 372 AYVIMSN 378 (534)
Q Consensus 372 ~~Iiv~~ 378 (534)
.++.+++
T Consensus 180 ~L~T~H~ 186 (289)
T PF13204_consen 180 QLITIHP 186 (289)
T ss_dssp S-EEEEE
T ss_pred CcEEEeC
Confidence 8888875
|
|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00011 Score=87.26 Aligned_cols=115 Identities=21% Similarity=0.222 Sum_probs=80.7
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc----CCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGSQNGNEHSATRD 305 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl----H~~pG~qng~~~sg~~~ 305 (534)
+.|++.||++|+|+||+. +. | .. .+..+.|.++||+|+-+. |..+... .... ..
T Consensus 358 ~~dl~lmK~~g~NavR~s-----Hy-P--~~----------~~fydlcDe~GllV~dE~~~e~~g~~~~~-~~~~---~~ 415 (1021)
T PRK10340 358 EKDIQLMKQHNINSVRTA-----HY-P--ND----------PRFYELCDIYGLFVMAETDVESHGFANVG-DISR---IT 415 (1021)
T ss_pred HHHHHHHHHCCCCEEEec-----CC-C--CC----------HHHHHHHHHCCCEEEECCcccccCccccc-cccc---cc
Confidence 578999999999999983 11 1 11 356889999999999875 4322100 0000 00
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 306 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 306 g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
.. +...+.+++-.+.+.+|+++||.|+.|.+.||... + . ..+++++.+|+.||+++|..++
T Consensus 416 ~~----p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~~~-g---~----~~~~~~~~~k~~DptR~v~~~~ 476 (1021)
T PRK10340 416 DD----PQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGY-G---C----NIRAMYHAAKALDDTRLVHYEE 476 (1021)
T ss_pred CC----HHHHHHHHHHHHHHHHhCCCCCEEEEEECccCccc-c---H----HHHHHHHHHHHhCCCceEEeCC
Confidence 01 23345566677889999999999999999999853 1 1 2368899999999999987653
|
|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0001 Score=82.46 Aligned_cols=138 Identities=20% Similarity=0.277 Sum_probs=91.7
Q ss_pred CCHHHHHHHHhCCccEEEe-CcccccccCCCCCCCCCCchHHHHHHH-HHHHHHCCCEEEEEc-C--CCCCCCC-CC---
Q 009475 228 ITDEDFKFLSSNGINAVRI-PVGWWIANDPTPPKPFVGGSSKVLDNA-FDWAEKYGVKVIVDL-H--AAPGSQN-GN--- 298 (534)
Q Consensus 228 ite~d~~~ia~~G~N~VRI-Pv~~w~~~~~~~~~~~~~~~l~~ld~~-v~~a~~~Gl~VIlDl-H--~~pG~qn-g~--- 298 (534)
+.++|++.||++|+|+||+ .|. |...+|..+ .|+ +..+|.. ++.|.+.||+|||-- - +.|..-. +.
T Consensus 31 ~w~ddl~~mk~~G~N~V~ig~fa-W~~~eP~eG-~fd---f~~~D~~~l~~a~~~Gl~vil~t~P~g~~P~Wl~~~~Pei 105 (673)
T COG1874 31 TWMDDLRKMKALGLNTVRIGYFA-WNLHEPEEG-KFD---FTWLDEIFLERAYKAGLYVILRTGPTGAPPAWLAKKYPEI 105 (673)
T ss_pred HHHHHHHHHHHhCCCeeEeeeEE-eeccCcccc-ccC---cccchHHHHHHHHhcCceEEEecCCCCCCchHHhcCChhh
Confidence 3489999999999999999 666 466677654 443 3456666 999999999999965 1 1111100 00
Q ss_pred ---CCCCCCCCCCCCC------hhhHHHHHHHHHHHHHH-hcCCCeEEEEEeccCCCC-C---CCChHHHHHHHHHHHHH
Q 009475 299 ---EHSATRDGFQEWG------DSNVADTVAVIDFLAAR-YANRPSLAAIELINEPLA-P---GVALDTLKSYYKAGYDA 364 (534)
Q Consensus 299 ---~~sg~~~g~~~W~------~~~~~~~~~~w~~lA~r-yk~~~~vlg~eL~NEP~~-~---~~~~~~~~~~~~~~~~a 364 (534)
+..+.......|. +.+.+....+.++|++| |+++++|+++.+-||=.. + ......++.|.++-|..
T Consensus 106 L~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v~~w~~dneY~~~~~~~~~~~~~f~~wLk~~yg~ 185 (673)
T COG1874 106 LAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAVITWQNDNEYGGHPCYCDYCQAAFRLWLKKGYGS 185 (673)
T ss_pred eEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCceeEEEccCccCCccccccccHHHHHHHHHhCcch
Confidence 0111111112221 45667777899999999 999999999999998443 1 22345667788887776
Q ss_pred HHhcCC
Q 009475 365 VRKYTS 370 (534)
Q Consensus 365 IR~~~p 370 (534)
+...+.
T Consensus 186 l~~ln~ 191 (673)
T COG1874 186 LDNLNE 191 (673)
T ss_pred HHhhhh
Confidence 655544
|
|
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00024 Score=72.33 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=71.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.|+..|+++|+|+||| | ..+|... =|..+....+.||||||||-....+-+.. ...+.
T Consensus 56 ~rDi~~l~~LgiNtIRV---Y--~vdp~~n----------Hd~CM~~~~~aGIYvi~Dl~~p~~sI~r~------~P~~s 114 (314)
T PF03198_consen 56 KRDIPLLKELGINTIRV---Y--SVDPSKN----------HDECMSAFADAGIYVILDLNTPNGSINRS------DPAPS 114 (314)
T ss_dssp HHHHHHHHHHT-SEEEE---S-----TTS------------HHHHHHHHHTT-EEEEES-BTTBS--TT------S----
T ss_pred HHhHHHHHHcCCCEEEE---E--EeCCCCC----------HHHHHHHHHhCCCEEEEecCCCCccccCC------CCcCC
Confidence 78999999999999999 2 2344321 37888889999999999998874443211 11124
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC---ChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
|.. ...+-...+.+.|+++++++||-+-||-..... ...-+++..+++-.-|++.+. +.|-|+
T Consensus 115 w~~----~l~~~~~~vid~fa~Y~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~-R~IPVG 180 (314)
T PF03198_consen 115 WNT----DLLDRYFAVIDAFAKYDNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGY-RSIPVG 180 (314)
T ss_dssp --H----HHHHHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS-----EE
T ss_pred CCH----HHHHHHHHHHHHhccCCceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCC-CCCcee
Confidence 543 344445566667889999999999999875321 234556666666666666554 444444
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0021 Score=58.42 Aligned_cols=106 Identities=20% Similarity=0.318 Sum_probs=65.0
Q ss_pred cccceeEEeeeeceeEEEeecCC-CceEEeccCCCC-CcceEEEEEecCceEEEEeeCCcEEEeecCCC----CceEEEe
Q 009475 63 LDGTQVQFMSTKFQKYIAAESGG-GTIVVANRTSAS-GWETFRLWRVNETFYNFRVNNKQFIGLENQGQ----GNGLVAV 136 (534)
Q Consensus 63 ~~g~~~~~~s~~~~~~~~a~~~g-~~~~~anr~~~~-~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~----~~~~~a~ 136 (534)
-||.-|.|+| ..||||+|+--| +-.+--+|.+.. .| +=+++.-+.+-+.||++.|.|++|.+... .+.-+..
T Consensus 5 ~d~~~VRLRS-~~~kYL~ADeDg~~Vs~~~~~~s~na~W-~Ve~v~~~~~~v~L~saYGrYL~as~~~~~lG~~G~~v~Q 82 (142)
T PF04601_consen 5 PDGKHVRLRS-HHGKYLHADEDGEGVSQDRRGASLNAAW-TVERVPGSPNYVRLRSAYGRYLAASDEPALLGHTGRRVVQ 82 (142)
T ss_pred CCCCEEEEEe-cCCCEEEEcCCCCeEEECCCCCCCcceE-EEEEecCCCCEEEEeeccCceEeccCCcCCCCCCCCEEEe
Confidence 4789999999 999999996644 333334444332 23 22223323467899999999999985421 1222222
Q ss_pred ec--CCCCCceEEEEEeCCCCceEEEEecCCceEEeccc
Q 009475 137 SN--TAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISE 173 (534)
Q Consensus 137 ~~--~~~~~EtF~ivr~~~~~~~v~i~~~nG~~Lq~~g~ 173 (534)
+. .+...-..+-++.+ ..|.++..+|.||.++|.
T Consensus 83 ~~~~~~d~~~~Wepvr~g---~~V~Lr~~~gr~LRANG~ 118 (142)
T PF04601_consen 83 TDPDRLDSSVEWEPVRDG---FYVKLRHRSGRYLRANGG 118 (142)
T ss_pred cCCccCCCCceEEEecCC---CEEEEEecCCceEEcCCC
Confidence 22 12222223445532 479999999999999874
|
Some family members contain two copies of the region. |
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00042 Score=74.86 Aligned_cols=108 Identities=21% Similarity=0.269 Sum_probs=83.4
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCC--CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~ 307 (534)
++|++.|+++|+++-|+.|+|--++ |... ....++.++....+|+...++||..+++|.+..-.|.-. +..
T Consensus 94 keDv~Lmk~lgv~afRFSIsWSRIl-P~G~~~~gVN~~Gi~fY~~LI~eL~~nGI~P~VTLfHwDlPq~Le------DeY 166 (524)
T KOG0626|consen 94 KEDVKLMKELGVDAFRFSISWSRIL-PNGRLTGGVNEAGIQFYNNLIDELLANGIEPFVTLFHWDLPQALE------DEY 166 (524)
T ss_pred HHHHHHHHHcCCCeEEEEeehHhhC-CCCCcCCCcCHHHHHHHHHHHHHHHHcCCeEEEEEecCCCCHHHH------HHh
Confidence 8999999999999999999984333 3322 346678999999999999999999999997653222111 123
Q ss_pred CCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 308 QEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 308 ~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
..|. +...+.|.++-+..-++|.|.- --|=-+|||+.
T Consensus 167 gGwLn~~ivedF~~yA~~CF~~fGDrV--K~WiT~NEP~v 204 (524)
T KOG0626|consen 167 GGWLNPEIVEDFRDYADLCFQEFGDRV--KHWITFNEPNV 204 (524)
T ss_pred ccccCHHHHHHHHHHHHHHHHHhcccc--eeeEEecccce
Confidence 3465 7788899999999999999974 33557899993
|
|
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0038 Score=71.46 Aligned_cols=141 Identities=14% Similarity=0.108 Sum_probs=93.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++-++.+|++|+|+|=.-|.|- +-+|.++ .|+=.....|.+.|+.|++.||+|||=.--+ -.+.+..| |.|.
T Consensus 62 ~d~L~k~Ka~GlNtV~tYV~Wn-~HEp~~G-~~dF~G~~DL~~Fl~la~e~GLyvilRpGPY---IcAEw~~G---GlP~ 133 (840)
T PLN03059 62 PDLIQKAKDGGLDVIQTYVFWN-GHEPSPG-NYYFEDRYDLVKFIKVVQAAGLYVHLRIGPY---ICAEWNFG---GFPV 133 (840)
T ss_pred HHHHHHHHHcCCCeEEEEeccc-ccCCCCC-eeeccchHHHHHHHHHHHHcCCEEEecCCcc---eeeeecCC---CCch
Confidence 7889999999999999988764 4455543 5554556779999999999999999853211 01111122 3344
Q ss_pred CC------------hhhHHHHHHHHHHHHHHhcC-------CCeEEEEEeccCCCCCCC-ChHHHHHHHHHHHHHHHhcC
Q 009475 310 WG------------DSNVADTVAVIDFLAARYAN-------RPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYT 369 (534)
Q Consensus 310 W~------------~~~~~~~~~~w~~lA~ryk~-------~~~vlg~eL~NEP~~~~~-~~~~~~~~~~~~~~aIR~~~ 369 (534)
|. +...+...++++.|..+.+. -..|++.++=||=..... ....=++|++.+.+..++.+
T Consensus 134 WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~~G 213 (840)
T PLN03059 134 WLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLG 213 (840)
T ss_pred hhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEEecccccceecccCcchHHHHHHHHHHHHHcC
Confidence 42 34555666777777776642 235888999999532100 00112677778888888888
Q ss_pred CceEEEEeC
Q 009475 370 STAYVIMSN 378 (534)
Q Consensus 370 p~~~Iiv~~ 378 (534)
-+.+++..+
T Consensus 214 i~VPl~t~d 222 (840)
T PLN03059 214 TGVPWVMCK 222 (840)
T ss_pred CCcceEECC
Confidence 888887765
|
|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.027 Score=58.51 Aligned_cols=164 Identities=18% Similarity=0.268 Sum_probs=98.3
Q ss_pred HHHHHHhCCccEEEeCccc-ccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEE---EEcCCCCCCCCCCCCCCCCCCC
Q 009475 232 DFKFLSSNGINAVRIPVGW-WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 232 d~~~ia~~G~N~VRIPv~~-w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VI---lDlH~~pG~qng~~~sg~~~g~ 307 (534)
....+-..-||.|=..-.. |...++.++ .+ .++..|+++++|+++||.|- |=.|. |.+.+-...
T Consensus 26 ~~~~~~~~~Fn~~t~eN~~Kw~~~e~~~g-~~---~~~~~D~~~~~a~~~g~~vrGH~LvW~~----~~P~w~~~~---- 93 (320)
T PF00331_consen 26 RYRELFAKHFNSVTPENEMKWGSIEPEPG-RF---NFESADAILDWARENGIKVRGHTLVWHS----QTPDWVFNL---- 93 (320)
T ss_dssp HHHHHHHHH-SEEEESSTTSHHHHESBTT-BE---E-HHHHHHHHHHHHTT-EEEEEEEEESS----SS-HHHHTS----
T ss_pred HHHHHHHHhCCeeeeccccchhhhcCCCC-cc---CccchhHHHHHHHhcCcceeeeeEEEcc----cccceeeec----
Confidence 5666666778888764221 334444332 22 57889999999999999985 33343 111111000
Q ss_pred CCCChh----hHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC-----ChHHHH-----HHHHHHHHHHHhcCCceE
Q 009475 308 QEWGDS----NVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-----ALDTLK-----SYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 308 ~~W~~~----~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~-----~~~~~~-----~~~~~~~~aIR~~~p~~~ 373 (534)
..+.+. ..+...+.++.+++||++...|..||++|||..... ....|. .|...+++..|+.+|+..
T Consensus 94 ~~~~~~~~~~~~~~l~~~I~~v~~~y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~~aF~~A~~~~P~a~ 173 (320)
T PF00331_consen 94 ANGSPDEKEELRARLENHIKTVVTRYKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIADAFRAAREADPNAK 173 (320)
T ss_dssp TTSSBHHHHHHHHHHHHHHHHHHHHTTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHHHHHHHHHHHHTTSE
T ss_pred cCCCcccHHHHHHHHHHHHHHHHhHhccccceEEEEEeeecccCCCccccccCChhhhcccHhHHHHHHHHHHHhCCCcE
Confidence 011212 456677899999999998778999999999987432 011232 588999999999999999
Q ss_pred EEEeCC-CCCCC-hhhhhcc-------cCCCceEEEEEeeccc
Q 009475 374 VIMSNR-LGPAD-HKELLSF-------ASGLSRVVIDVHYYNL 407 (534)
Q Consensus 374 Iiv~~~-~~~~~-~~~~~~~-------~~~~~nvv~d~H~Y~~ 407 (534)
+++.+. ..... ...+..+ ..+-+.|-+..|+-..
T Consensus 174 L~~NDy~~~~~~k~~~~~~lv~~l~~~gvpIdgIG~Q~H~~~~ 216 (320)
T PF00331_consen 174 LFYNDYNIESPAKRDAYLNLVKDLKARGVPIDGIGLQSHFDAG 216 (320)
T ss_dssp EEEEESSTTSTHHHHHHHHHHHHHHHTTHCS-EEEEEEEEETT
T ss_pred EEeccccccchHHHHHHHHHHHHHHhCCCccceechhhccCCC
Confidence 998642 11110 0112111 1346789999998643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B .... |
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0053 Score=62.52 Aligned_cols=127 Identities=17% Similarity=0.212 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHCCCEEEEEcCCCC---CCCCCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 009475 266 SSKVLDNAFDWAEKYGVKVIVDLHAAP---GSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELI 341 (534)
Q Consensus 266 ~l~~ld~~v~~a~~~Gl~VIlDlH~~p---G~qng~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~ 341 (534)
.++.-|++++.|++|||.+ |..+ .+|...+.++. .+. +...++..+.+..+.+||++. +..||++
T Consensus 80 ~Fe~AD~ia~FAr~h~m~l----hGHtLvW~~q~P~W~~~~-----e~~~~~~~~~~e~hI~tV~~rYkg~--~~sWDVV 148 (345)
T COG3693 80 NFEAADAIANFARKHNMPL----HGHTLVWHSQVPDWLFGD-----ELSKEALAKMVEEHIKTVVGRYKGS--VASWDVV 148 (345)
T ss_pred CccchHHHHHHHHHcCCee----ccceeeecccCCchhhcc-----ccChHHHHHHHHHHHHHHHHhccCc--eeEEEec
Confidence 4788899999999999986 5432 22333332221 122 345567778889999999997 7889999
Q ss_pred cCCCCCCCC--hHHHH------HHHHHHHHHHHhcCCceEEEEeCC-CCCCCh---------hhhhcccCCCceEEEEEe
Q 009475 342 NEPLAPGVA--LDTLK------SYYKAGYDAVRKYTSTAYVIMSNR-LGPADH---------KELLSFASGLSRVVIDVH 403 (534)
Q Consensus 342 NEP~~~~~~--~~~~~------~~~~~~~~aIR~~~p~~~Iiv~~~-~~~~~~---------~~~~~~~~~~~nvv~d~H 403 (534)
|||.....+ ...|. ++++.++..-|+.+|+..+++.+. ...... ..+..--.+-+.+-+..|
T Consensus 149 NE~vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~NDY~ie~~~~kr~~~~nlI~~LkekG~pIDgiG~QsH 228 (345)
T COG3693 149 NEAVDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVINDYSIEGNPAKRNYVLNLIEELKEKGAPIDGIGIQSH 228 (345)
T ss_pred ccccCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEeecccccCChHHHHHHHHHHHHHHHCCCCccceeeeee
Confidence 999973211 12232 578889999999999999888653 211111 111221245678999999
|
|
| >PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.13 Score=56.72 Aligned_cols=167 Identities=19% Similarity=0.220 Sum_probs=83.5
Q ss_pred HhCCccEEEeCccccccc------CCCCCC----CCC--Cc----hHHHHHHHHHHHHHCCCEEEEEcCCCCCCC--CCC
Q 009475 237 SSNGINAVRIPVGWWIAN------DPTPPK----PFV--GG----SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ--NGN 298 (534)
Q Consensus 237 a~~G~N~VRIPv~~w~~~------~~~~~~----~~~--~~----~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~q--ng~ 298 (534)
..+|++.+|+||+--.+. ++.+.+ .|. .+ .+..|+++++. ..+|+++-.--.+|+.. |+.
T Consensus 110 ~G~g~s~~R~pIgssDfs~~~Yty~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~--~~~lki~aSpWSpP~WMKtn~~ 187 (496)
T PF02055_consen 110 DGIGYSLLRVPIGSSDFSTRPYTYDDVPGDFNLSNFSIAREDKKYKIPLIKEALAI--NPNLKIFASPWSPPAWMKTNGS 187 (496)
T ss_dssp TTT---EEEEEES--SSSSS---ST-STTHTTTTT---HHHHHTTHHHHHHHHHHH--HTT-EEEEEES---GGGBTTSS
T ss_pred CCceEEEEEeeccCcCCcCCcccccCCCCCCccccCCccccchhhHHHHHHHHHHh--CCCcEEEEecCCCCHHHccCCc
Confidence 458999999999742221 111111 111 00 12333333332 23599999999999753 222
Q ss_pred CC-CCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCC----------CCChHHHHHHHHH-HHHHH
Q 009475 299 EH-SATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP----------GVALDTLKSYYKA-GYDAV 365 (534)
Q Consensus 299 ~~-sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~----------~~~~~~~~~~~~~-~~~aI 365 (534)
-. .|...+.. .+.+.+.+.++..+..+.|+.+. .|.++-+-|||... ..+++...+|.+. +..++
T Consensus 188 ~~g~g~l~g~~--~~~y~~~yA~Y~vkfi~aY~~~GI~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l 265 (496)
T PF02055_consen 188 MNGGGSLKGSL--GDEYYQAYADYFVKFIQAYKKEGIPIWAITPQNEPDNGSDPNYPWPSMGWTPEEQADFIKNYLGPAL 265 (496)
T ss_dssp SCSS-BBSCGT--TSHHHHHHHHHHHHHHHHHHCTT--ESEEESSSSCCGGGSTT-SSC--B--HHHHHHHHHHTHHHHH
T ss_pred CcCCCccCCCC--CchhHHHHHHHHHHHHHHHHHCCCCeEEEeccCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 11 12111111 02455666777777777788764 68899999999841 1346778888876 88899
Q ss_pred HhcCC--ceEEEE-eC-CCCCCCh-hhhhccc-CCCceEEEEEeeccc
Q 009475 366 RKYTS--TAYVIM-SN-RLGPADH-KELLSFA-SGLSRVVIDVHYYNL 407 (534)
Q Consensus 366 R~~~p--~~~Iiv-~~-~~~~~~~-~~~~~~~-~~~~nvv~d~H~Y~~ 407 (534)
|+.++ +..|++ .. .+...++ ...+.-+ ...---.+.+|.|..
T Consensus 266 ~~~~~g~d~kI~~~D~n~~~~~~~~~~il~d~~A~~yv~GiA~HwY~g 313 (496)
T PF02055_consen 266 RKAGLGKDVKILIYDHNRDNLPDYADTILNDPEAAKYVDGIAFHWYGG 313 (496)
T ss_dssp HTSTT-TTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTEEEEEEEETTC
T ss_pred HhcCCCCceEEEEEecCCcccchhhhhhhcChhhHhheeEEEEECCCC
Confidence 99876 555555 32 2211111 1222111 111236789999954
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A .... |
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0069 Score=69.87 Aligned_cols=110 Identities=20% Similarity=0.228 Sum_probs=75.8
Q ss_pred CHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 308 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~ 308 (534)
.+.|++.||++|+|+||.- +| |.. ++..+.|.++||+||-|.-... |... ..
T Consensus 323 ~~~dl~lmk~~n~N~vRts-Hy----------P~~-------~~~ydLcDelGllV~~Ea~~~~-------~~~~--~~- 374 (808)
T COG3250 323 MERDLKLMKEANMNSVRTS-HY----------PNS-------EEFYDLCDELGLLVIDEAMIET-------HGMP--DD- 374 (808)
T ss_pred HHHHHHHHHHcCCCEEEec-CC----------CCC-------HHHHHHHHHhCcEEEEecchhh-------cCCC--CC-
Confidence 3679999999999999984 11 222 5677899999999999875431 1000 11
Q ss_pred CCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 309 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 309 ~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
+...+...+=.+.|.+|-|+||+|+.|.+.||+.... . ...++..+.+.++++.+-.+
T Consensus 375 ---~~~~k~~~~~i~~mver~knHPSIiiWs~gNE~~~g~-~-------~~~~~~~~k~~d~~r~~~~~ 432 (808)
T COG3250 375 ---PEWRKEVSEEVRRMVERDRNHPSIIIWSLGNESGHGS-N-------HWALYRWFKASDPTRPVQYE 432 (808)
T ss_pred ---cchhHHHHHHHHHHHHhccCCCcEEEEeccccccCcc-c-------cHHHHHHHhhcCCccceecc
Confidence 2335566677788899999999999999999987522 1 12334555566666666554
|
|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.57 Score=54.98 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHCCCEEEEEc---CCCCCCCCC---CC-----------CCCCCCCCCCCC------hhhHHHHHHHH
Q 009475 266 SSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNG---NE-----------HSATRDGFQEWG------DSNVADTVAVI 322 (534)
Q Consensus 266 ~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qng---~~-----------~sg~~~g~~~W~------~~~~~~~~~~w 322 (534)
....|+++|+.|.++||+||+|+ |...++... .+ ..|.......+. +...+..++..
T Consensus 402 Ri~Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~~P~YY~r~~~~G~~~n~~~~~d~a~e~~~Vrk~iiDsl 481 (898)
T TIGR02103 402 RIKEFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKIVPGYYHRLNEDGGVENSTCCSNTATEHRMMAKLIVDSL 481 (898)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeecccccccCccCcccccccCcHhhEeeCCCCCeecCCCCcCCCCCCHHHHHHHHHHH
Confidence 35789999999999999999998 765532210 00 001100001111 22234445555
Q ss_pred HHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCC
Q 009475 323 DFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 381 (534)
Q Consensus 323 ~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~ 381 (534)
+..++.|+=+. +-||++..- + ..+++++.+++|+++|+.+ +++.+|.
T Consensus 482 ~~W~~ey~VDG--FRfDlm~~~-----~----~~f~~~~~~~l~~i~pdi~-l~GEgW~ 528 (898)
T TIGR02103 482 VVWAKDYKVDG--FRFDLMGHH-----P----KAQMLAAREAIKALTPEIY-FYGEGWD 528 (898)
T ss_pred HHHHHHcCCCE--EEEechhhC-----C----HHHHHHHHHHHHHhCCCEE-EEecCCC
Confidence 56666665432 237777543 2 4466777788999999755 4455564
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >KOG3962 consensus Predicted actin-bundling protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.026 Score=54.37 Aligned_cols=117 Identities=21% Similarity=0.316 Sum_probs=85.5
Q ss_pred eeeEecccceeeccccCCcCCcCCCCCcccccceeEEeeeeceeEEEeecCCCceEEeccCCC---CCcceEEEEEecCc
Q 009475 34 LRAVNLGNWLVTEGWMKPSRFDDIPNKDLLDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSA---SGWETFRLWRVNET 110 (534)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~---~~wetf~~~~~~~~ 110 (534)
-..||-|||--.- .+++ +-| .|.++ +.-|.||.|+-.|..-|-+--+.. .+=|.|.+..++++
T Consensus 29 ~~~~~~g~w~~~~-----~~~~-------~~g-~v~ie-~~~~~yl~a~dng~ft~g~ph~~~~gp~p~e~f~avki~ds 94 (246)
T KOG3962|consen 29 EDAVNDGGWWDAN-----ELND-------IEG-TVAIE-IDDGTYLGAMDNGLFTLGAPHDEVDGPEPEEQFMAVKISDS 94 (246)
T ss_pred hhhhcCCcceecc-----ccce-------eeE-EEEEE-ecCceEEEEEecCceeeccCCccccCCCchhhEEEEEccCc
Confidence 3678999985432 2222 334 66666 455888888666666655544333 46689999999999
Q ss_pred eEEEEeeCCcEEEeecCCCCceEEEeecCCCCCceEEEEEeCCCCceEEEEecCCceEEe
Q 009475 111 FYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQA 170 (534)
Q Consensus 111 ~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~EtF~ivr~~~~~~~v~i~~~nG~~Lq~ 170 (534)
+++|++.=|+|++++. .+.|++...++|+-|.|..|--. .++.+-+.||.+...
T Consensus 95 rIaLKsGyGKYlsins---dglvvg~qeAvG~~EQw~~vFq~---~r~a~~as~s~~~~~ 148 (246)
T KOG3962|consen 95 RIALKSGYGKYLSINS---DGLVVGRQEAVGSREQWEPVFQE---GRMALLASNSCFIRC 148 (246)
T ss_pred eEEecccccceeeecC---CccEEEehhhcCcHhhchhhhhc---cceEEeeccceeEEe
Confidence 9999999999999997 44799999999999999866542 357777777766654
|
|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.11 Score=58.91 Aligned_cols=146 Identities=18% Similarity=0.225 Sum_probs=80.8
Q ss_pred HHHHHHHHhCCccEEEe-Cccc------ccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCCCCC-
Q 009475 230 DEDFKFLSSNGINAVRI-PVGW------WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN- 296 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~------w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qn- 296 (534)
++-++.|+++|+|+|=| ||.. |-. ++.......+ +..+.|+++|+.|.++||+||||+ |..+....
T Consensus 160 ~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY-~~~~y~~~~~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~ 238 (613)
T TIGR01515 160 DQLIPYVKELGFTHIELLPVAEHPFDGSWGY-QVTGYYAPTSRFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHGL 238 (613)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCC-CcccCcccccccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccchh
Confidence 44458999999999999 8742 211 1110000011 467899999999999999999997 65442210
Q ss_pred ----C---CCCCCCCC-CCCCCC--------hhhHHHHHHHHHHHHHHhcCCCeEEEEEec---------cCCCC-----
Q 009475 297 ----G---NEHSATRD-GFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELI---------NEPLA----- 346 (534)
Q Consensus 297 ----g---~~~sg~~~-g~~~W~--------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~---------NEP~~----- 346 (534)
+ ..+..... ....|. +..++..++..+...+.|.=+. +-+|.+ .+|..
T Consensus 239 ~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey~iDG--~R~D~v~~~~~~~~~~~~~~~~~~~ 316 (613)
T TIGR01515 239 AEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFYHIDG--LRVDAVASMLYLDYSRDEGEWSPNE 316 (613)
T ss_pred hccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCcE--EEEcCHHHhhhhccccccccccccc
Confidence 0 00000000 112343 3334455566666666654321 112221 12210
Q ss_pred C-CCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 347 P-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 347 ~-~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
. +.....-..+.+++.+.||+..|+.++|-+.
T Consensus 317 ~~~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~ 349 (613)
T TIGR01515 317 DGGRENLEAVDFLRKLNQTVYEAFPGVVTIAEE 349 (613)
T ss_pred cCCcCChHHHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 0 0011234578899999999999998888764
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.13 Score=58.42 Aligned_cols=144 Identities=17% Similarity=0.220 Sum_probs=77.9
Q ss_pred HHHHHHHHhCCccEEEe-Ccc------cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI-PVG------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNG 297 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~------~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qng 297 (534)
++-++.|+++|+|+|=| ||. .|-. ++.......+ +..+.|+++|+.|.++||+||||+ |..+... +
T Consensus 174 ~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY-~~~~y~~i~~~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~~~~-~ 251 (633)
T PRK12313 174 DELIPYVKEMGYTHVEFMPLMEHPLDGSWGY-QLTGYFAPTSRYGTPEDFMYLVDALHQNGIGVILDWVPGHFPKDDD-G 251 (633)
T ss_pred HHHHHHHHHcCCCEEEeCchhcCCCCCCCCC-CCcCcCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCcc-c
Confidence 44469999999999986 652 1211 1111000111 568899999999999999999997 5443211 1
Q ss_pred CC-CCC--------C-CCCCCCCC--------hhhHHHHHHHHHHHHHHhcCCCeEEEEEec-cC------------C--
Q 009475 298 NE-HSA--------T-RDGFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELI-NE------------P-- 344 (534)
Q Consensus 298 ~~-~sg--------~-~~g~~~W~--------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~-NE------------P-- 344 (534)
.. ..+ . ......|. +..++..++..+...+.|.=+. +-+|.. +. |
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~~~iDG--~R~D~~~~~~~~d~~~~~~~~~~~ 329 (633)
T PRK12313 252 LAYFDGTPLYEYQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDEYHLDG--LRVDAVSNMLYLDYDEEGEWTPNK 329 (633)
T ss_pred ccccCCCcceeecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCcE--EEEcChhhhhhcccccccCcCCcc
Confidence 00 000 0 00112342 3334445555555555554221 112211 11 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 345 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
.....+. .-..+.+.+.+.||+..|+.++|-+.
T Consensus 330 ~~~~~~~-~~~~fl~~~~~~v~~~~p~~~liaE~ 362 (633)
T PRK12313 330 YGGRENL-EAIYFLQKLNEVVYLEHPDVLMIAEE 362 (633)
T ss_pred cCCCCCc-HHHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 1111111 33578899999999999998777664
|
|
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
Probab=95.92 E-value=2.1 Score=50.59 Aligned_cols=27 Identities=15% Similarity=0.313 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 266 SSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 266 ~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
....++++|+.|.++||+||+|+ |...
T Consensus 464 RI~efk~mV~~lH~~GI~VImDVVyNHt~~ 493 (970)
T PLN02877 464 RIIEFRKMVQALNRIGLRVVLDVVYNHLHS 493 (970)
T ss_pred hHHHHHHHHHHHHHCCCEEEEEECCccccC
Confidence 35679999999999999999997 6643
|
|
| >PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.18 Score=53.24 Aligned_cols=104 Identities=16% Similarity=0.172 Sum_probs=61.0
Q ss_pred HHHHHHHCCCEEEEEcC-CCCCC--CCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCC-
Q 009475 273 AFDWAEKYGVKVIVDLH-AAPGS--QNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP- 347 (534)
Q Consensus 273 ~v~~a~~~Gl~VIlDlH-~~pG~--qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~- 347 (534)
+++.|+++|+..++-+- .+|.. .||...++ ..+...-.+...+.+..++..++++|+... .+--++.+|||...
T Consensus 109 fL~~Ak~rGV~~f~aFSNSPP~~MT~NG~~~g~-~~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~~~W 187 (384)
T PF14587_consen 109 FLKAAKERGVNIFEAFSNSPPWWMTKNGSASGG-DDGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQWNW 187 (384)
T ss_dssp HHHHHHHTT---EEEE-SSS-GGGSSSSSSB-S--SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TTS-G
T ss_pred HHHHHHHcCCCeEEEeecCCCHHHhcCCCCCCC-CccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCCCCC
Confidence 67899999999877554 44442 23332211 111100015778899999999999996653 56678999999863
Q ss_pred --------CCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 348 --------GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 348 --------~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
..+.+...++++.+..++++.+.+..|+++
T Consensus 188 ~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t~I~~~ 225 (384)
T PF14587_consen 188 AGGSQEGCHFTNEEQADVIRALDKALKKRGLSTKISAC 225 (384)
T ss_dssp G--SS-B----HHHHHHHHHHHHHHHHHHT-S-EEEEE
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEec
Confidence 124567788999999999999988777775
|
|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.29 Score=54.59 Aligned_cols=137 Identities=19% Similarity=0.268 Sum_probs=73.5
Q ss_pred HHHHHHHhCCccEEEe-Ccc------cccccCCCC----CCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVG------WWIANDPTP----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN 296 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~------~w~~~~~~~----~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qn 296 (534)
+.++.|+++|+|+|=| ||. .|- .++.. ...| +..+.|+++|+.|.++||+||||+ |..+.+..
T Consensus 115 ~~l~yl~~LGv~~i~L~Pi~~~~~~~~~G-Y~~~~~~~~~~~~--G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~ 191 (542)
T TIGR02402 115 EKLPYLADLGITAIELMPVAQFPGTRGWG-YDGVLPYAPHNAY--GGPDDLKALVDAAHGLGLGVILDVVYNHFGPEGNY 191 (542)
T ss_pred HhhHHHHHcCCCEEEeCccccCCCCCCCC-CCccCcccccccc--CCHHHHHHHHHHHHHCCCEEEEEEccCCCCCcccc
Confidence 3489999999999997 552 121 11110 0112 468899999999999999999997 65443211
Q ss_pred CCCCCC--CCCCCCCCC-------h---hhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHH
Q 009475 297 GNEHSA--TRDGFQEWG-------D---SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDA 364 (534)
Q Consensus 297 g~~~sg--~~~g~~~W~-------~---~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~a 364 (534)
-..... .......|. + ..++.+++..+.-.+.|+=+. +-+|+...-.. . .-..+.+++.++
T Consensus 192 ~~~~~~y~~~~~~~~wg~~~n~~~~~~~~vr~~i~~~~~~W~~e~~iDG--fR~D~~~~~~~--~---~~~~~l~~~~~~ 264 (542)
T TIGR02402 192 LPRYAPYFTDRYSTPWGAAINFDGPGSDEVRRYILDNALYWLREYHFDG--LRLDAVHAIAD--T---SAKHILEELARE 264 (542)
T ss_pred ccccCccccCCCCCCCCCccccCCCcHHHHHHHHHHHHHHHHHHhCCcE--EEEeCHHHhcc--c---cHHHHHHHHHHH
Confidence 000000 000112232 2 223344444444444443221 12343332211 0 114678888888
Q ss_pred HHhcCCc---eEEEEe
Q 009475 365 VRKYTST---AYVIMS 377 (534)
Q Consensus 365 IR~~~p~---~~Iiv~ 377 (534)
+|++.|+ .++|-+
T Consensus 265 ~~~~~p~~~~~~li~E 280 (542)
T TIGR02402 265 VHELAAELRPVHLIAE 280 (542)
T ss_pred HHHHCCCCceEEEEEe
Confidence 9998887 454444
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.18 Score=54.61 Aligned_cols=126 Identities=15% Similarity=0.292 Sum_probs=83.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG~qng~~~sg~~~g~ 307 (534)
+..++.||++|+.-|=++| ||...+...+..| .+...+++++.+++.|||+ |+.+|...|.- |. .. ....
T Consensus 120 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGGNv-Gd-~~--~IpL 191 (531)
T PLN02161 120 TVSLKALKLAGVHGIAVEV-WWGIVERFSPLEF---KWSLYEELFRLISEAGLKLHVALCFHSNMHLF-GG-KG--GISL 191 (531)
T ss_pred HHHHHHHHHcCCCEEEEEe-eeeeeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCCCC-CC-cc--CccC
Confidence 7899999999999999999 7777776566677 5888999999999999985 66778754421 11 11 1233
Q ss_pred CCCChhhHHHHHHHHHHHHH----HhcCC-----CeEEEEEeccCCCCCCCC-hHHHHHHHHHHHHHHHhcCCceE
Q 009475 308 QEWGDSNVADTVAVIDFLAA----RYANR-----PSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 308 ~~W~~~~~~~~~~~w~~lA~----ryk~~-----~~vlg~eL~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~ 373 (534)
|.|- |+...+ -|+|. +.-+.+-+-|+|...+.+ .+.+.+|++..-+.....-.+.+
T Consensus 192 P~WV----------~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~~~~~I 257 (531)
T PLN02161 192 PLWI----------REIGDVNKDIYYRDKNGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYIGNVI 257 (531)
T ss_pred CHHH----------HhhhccCCCceEEcCCCCcccceeeeecccchhcCCCCHHHHHHHHHHHHHHHHHHHhcCce
Confidence 4441 111111 13332 345667777999876543 46788888887777776543433
|
|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.043 Score=51.53 Aligned_cols=60 Identities=23% Similarity=0.289 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCccEEEeCcccccc--------cCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEcC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIA--------NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDLH 289 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~--------~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDlH 289 (534)
.+.++.|+++|+|+|-|+=-+... .++.......+ +..+.|+++|+.|+++||+||+|+=
T Consensus 22 ~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 22 IEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred HHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345779999999999985322111 11111111111 5689999999999999999999983
|
|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=95.56 E-value=4 Score=46.30 Aligned_cols=60 Identities=27% Similarity=0.515 Sum_probs=40.6
Q ss_pred HHHHHHHhCCccEEEe-Cccc--------------ccccCCCC---C------CCCCC-chHHHHHHHHHHHHHCCCEEE
Q 009475 231 EDFKFLSSNGINAVRI-PVGW--------------WIANDPTP---P------KPFVG-GSSKVLDNAFDWAEKYGVKVI 285 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~--------------w~~~~~~~---~------~~~~~-~~l~~ld~~v~~a~~~Gl~VI 285 (534)
+-++.|+++|+|+|=| ||.- |-. ++.. + .|..+ +..+.|+++|+.|.++||+||
T Consensus 168 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~~~~~~~~~wGY-~~~~y~~~~~~y~~~p~~~~~~~~efk~lV~~~H~~Gi~Vi 246 (605)
T TIGR02104 168 TGLDYLKELGVTHVQLLPVFDFAGVDEEDPNNAYNWGY-DPLNYNVPEGSYSTNPYDPATRIRELKQMIQALHENGIRVI 246 (605)
T ss_pred hHHHHHHHcCCCEEEeCCcccccccccccCCCCCCCCC-CCccCCCcChhhhcCCCccchHHHHHHHHHHHHHHCCCEEE
Confidence 4589999999999987 5531 111 1100 0 01111 135889999999999999999
Q ss_pred EEc---CCC
Q 009475 286 VDL---HAA 291 (534)
Q Consensus 286 lDl---H~~ 291 (534)
||+ |..
T Consensus 247 lDvV~NH~~ 255 (605)
T TIGR02104 247 MDVVYNHTY 255 (605)
T ss_pred EEEEcCCcc
Confidence 997 654
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.26 Score=56.94 Aligned_cols=146 Identities=16% Similarity=0.245 Sum_probs=78.9
Q ss_pred CHHHHHHHHhCCccEEEe-Cccc------ccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCCCC-
Q 009475 229 TDEDFKFLSSNGINAVRI-PVGW------WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ- 295 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRI-Pv~~------w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~q- 295 (534)
.++-+..|+++|+|+|=| ||.- |- .++.......+ +..+.|+++|+.|.++||+||||+ |..+...
T Consensus 268 ~~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~G-Y~~~~y~ai~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~~~~~ 346 (726)
T PRK05402 268 ADQLIPYVKEMGFTHVELLPIAEHPFDGSWG-YQPTGYYAPTSRFGTPDDFRYFVDACHQAGIGVILDWVPAHFPKDAHG 346 (726)
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCC-CCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccc
Confidence 344468999999999987 5521 11 11111000111 468899999999999999999997 6543211
Q ss_pred -CCCC------CCCCCC-CCCCCC--------hhhHHHHHHHHHHHHHHhcCCCeEEEEEec-cC---------------
Q 009475 296 -NGNE------HSATRD-GFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELI-NE--------------- 343 (534)
Q Consensus 296 -ng~~------~sg~~~-g~~~W~--------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~-NE--------------- 343 (534)
...+ +..... ..+.|. +..++..++..+...++|.=+. +-+|.+ ++
T Consensus 347 ~~~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e~~iDG--~R~D~v~~~~~~~~~~~~g~~~~~ 424 (726)
T PRK05402 347 LARFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEEFHIDG--LRVDAVASMLYLDYSRKEGEWIPN 424 (726)
T ss_pred hhccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHHhCCcE--EEECCHHHhhhccccccccccccc
Confidence 0000 100000 122342 3333444455555555543221 112311 22
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 344 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 344 P~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
+.. +.....-..+.+.+.+.||+..|+.++|-+.
T Consensus 425 ~~~-~~~~~~~~~fl~~~~~~~~~~~p~~~liaE~ 458 (726)
T PRK05402 425 IYG-GRENLEAIDFLRELNAVVHEEFPGALTIAEE 458 (726)
T ss_pred ccc-CcCCHHHHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 111 1111234678899999999999998877763
|
|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.18 Score=54.79 Aligned_cols=129 Identities=17% Similarity=0.406 Sum_probs=83.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG~qng~~~sg~~~g~ 307 (534)
+..++.||++|+.-|=++| ||...+...+..| .+...+++++.+++.|||+ |+.+|...|. -|+. .....
T Consensus 110 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGGN-VGD~---~~IpL 181 (548)
T PLN02803 110 NASLMALRSAGVEGVMVDA-WWGLVEKDGPMKY---NWEGYAELVQMVQKHGLKLQVVMSFHQCGGN-VGDS---CSIPL 181 (548)
T ss_pred HHHHHHHHHcCCCEEEEEe-eeeeeccCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCCC-CCCc---ccccC
Confidence 6789999999999999999 7777776656677 5888999999999999985 6677875442 1111 11223
Q ss_pred CCCChhhHHHHHHHHHHHHH----HhcCC-----CeEEEEEeccCCCCCCCC-hHHHHHHHHHHHHHHHhcCCceEEEE
Q 009475 308 QEWGDSNVADTVAVIDFLAA----RYANR-----PSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 308 ~~W~~~~~~~~~~~w~~lA~----ryk~~-----~~vlg~eL~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~Iiv 376 (534)
|.| +|+...+ -|+|. ..-+.+-+-|+|...+.+ .+.+.+|++..-+.....-.+.++-|
T Consensus 182 P~W----------V~e~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~~~I~eI 250 (548)
T PLN02803 182 PPW----------VLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLGGVIAEI 250 (548)
T ss_pred CHH----------HHHhhhcCCCceEecCCCCcccceeccccccchhccCCCHHHHHHHHHHHHHHHHHHHhcCceEEE
Confidence 434 2221111 13332 334556677889875543 46777888777777666443444333
|
|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.48 Score=54.54 Aligned_cols=147 Identities=20% Similarity=0.247 Sum_probs=80.0
Q ss_pred CHHHHHHHHhCCccEEEe-Ccc------cccccCCCC---CCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRI-PVG------WWIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ 295 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRI-Pv~------~w~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~q 295 (534)
+++-+..|+++|+|+|=| ||. .|.. ++.. +.+. -+..+.|+++|+.|.++||+||||+ |......
T Consensus 253 ~~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY-~~~~~fa~~~~-~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~ 330 (758)
T PLN02447 253 ADDVLPRIKALGYNAVQLMAIQEHAYYGSFGY-HVTNFFAVSSR-SGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTL 330 (758)
T ss_pred HHHHHHHHHHcCCCEEEECCccccCCCCCCCc-CcccCcccccc-cCCHHHHHHHHHHHHHCCCEEEEEecccccccccc
Confidence 356799999999999987 442 1111 1110 1111 1457889999999999999999997 4433211
Q ss_pred ---CCC-------CCCCCCCCCCCCC--------hhhHHHHHHHHHHHHHHhcCC-------CeEE------EEEe---c
Q 009475 296 ---NGN-------EHSATRDGFQEWG--------DSNVADTVAVIDFLAARYANR-------PSLA------AIEL---I 341 (534)
Q Consensus 296 ---ng~-------~~sg~~~g~~~W~--------~~~~~~~~~~w~~lA~ryk~~-------~~vl------g~eL---~ 341 (534)
+.+ .+.+...-...|. +..++..++..+...++|.=+ ..++ +.+- .
T Consensus 331 ~gl~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~ 410 (758)
T PLN02447 331 DGLNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNY 410 (758)
T ss_pred ccccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCc
Confidence 111 1111110112343 233344445555555555321 1121 0010 1
Q ss_pred cCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 342 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 342 NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
||-.....+. .-..|++.+-+.|++..|+.+.|.++
T Consensus 411 ~~~~g~~~d~-~a~~fL~~~N~~i~~~~p~~~~IAEd 446 (758)
T PLN02447 411 NEYFGMATDV-DAVVYLMLANDLLHGLYPEAVTIAED 446 (758)
T ss_pred ccccCCccCh-HHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 3322212232 33568889999999999998888764
|
|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.57 Score=52.98 Aligned_cols=59 Identities=17% Similarity=0.228 Sum_probs=40.6
Q ss_pred HHHHHHHHhCCccEEEe-Ccccc---cccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWW---IANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w---~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+-++.|+++|+|+|=| ||.-- +..++..-...++ |..+.|+++|+.|+++||+||||+
T Consensus 182 ~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~ 246 (598)
T PRK10785 182 SEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDG 246 (598)
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35689999999999998 44210 0001111111122 578999999999999999999998
|
|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.21 Score=54.12 Aligned_cols=121 Identities=23% Similarity=0.496 Sum_probs=80.5
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG~qng~~~sg~~~g~ 307 (534)
++.++.||++|+.-|=++| ||...+...+..| .++..+++++.+++.||++ |+.+|...|. -|++ ....-
T Consensus 40 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGGN-VGD~---~~IpL 111 (517)
T PLN02801 40 EKQLKRLKEAGVDGVMVDV-WWGIVESKGPKQY---DWSAYRSLFELVQSFGLKIQAIMSFHQCGGN-VGDA---VNIPI 111 (517)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEecccCCC-CCCc---ccccC
Confidence 6789999999999999999 7777666556667 5888999999999999985 6777875442 1111 11223
Q ss_pred CCCChhhHHHHHHHHHHHHH----HhcC-----CCeEEEEEeccCCCCCCCC-hHHHHHHHHHHHHHHHhc
Q 009475 308 QEWGDSNVADTVAVIDFLAA----RYAN-----RPSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKY 368 (534)
Q Consensus 308 ~~W~~~~~~~~~~~w~~lA~----ryk~-----~~~vlg~eL~NEP~~~~~~-~~~~~~~~~~~~~aIR~~ 368 (534)
|.| +|+...+ -|+| ++.-+.+-+-|+|...+.+ .+.+.+|++..-+.....
T Consensus 112 P~W----------V~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~ 172 (517)
T PLN02801 112 PQW----------VRDVGDSDPDIFYTNRSGNRNKEYLSIGVDNLPLFHGRTAVEMYSDYMKSFRENMADF 172 (517)
T ss_pred CHH----------HHHhhccCCCceeecCCCCcCcceeeeccCcccccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 434 1111111 1333 2345667777999876544 477778887777777664
|
|
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.15 Score=54.10 Aligned_cols=127 Identities=19% Similarity=0.439 Sum_probs=75.5
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG~qng~~~sg~~~g~ 307 (534)
+..++.||++|+..|=++| ||...+...+..| .+...+++++.+++.||++ |+.+|...|.- |++ ....-
T Consensus 19 ~~~L~~LK~~GV~GVmvdv-WWGiVE~~~p~~y---dWs~Y~~l~~~vr~~GLk~~~vmsfH~cGgNv-gD~---~~IpL 90 (402)
T PF01373_consen 19 EAQLRALKSAGVDGVMVDV-WWGIVEGEGPQQY---DWSGYRELFEMVRDAGLKLQVVMSFHQCGGNV-GDD---CNIPL 90 (402)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTGSSTTB------HHHHHHHHHHHHTT-EEEEEEE-S-BSSST-TSS---SEB-S
T ss_pred HHHHHHHHHcCCcEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-CCc---cCCcC
Confidence 7899999999999999999 6767666555566 5889999999999999996 56778764421 111 01122
Q ss_pred CCCChhhHHHHHHHHHHHHH---HhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEE
Q 009475 308 QEWGDSNVADTVAVIDFLAA---RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 308 ~~W~~~~~~~~~~~w~~lA~---ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv 376 (534)
|.| +|+..++ -|+|.....--|-+. |...+.+.+...+|++...+..+..- +.+.-|
T Consensus 91 P~W----------v~~~~~~~di~ytd~~G~rn~E~lS-p~~~grt~~~Y~dfm~sF~~~f~~~~-~~I~~I 150 (402)
T PF01373_consen 91 PSW----------VWEIGKKDDIFYTDRSGNRNKEYLS-PVLDGRTLQCYSDFMRSFRDNFSDYL-STITEI 150 (402)
T ss_dssp -HH----------HHHHHHHSGGEEE-TTS-EEEEEE--CTBTTBCHHHHHHHHHHHHHHCHHHH-TGEEEE
T ss_pred CHH----------HHhccccCCcEEECCCCCcCcceee-cccCCchHHHHHHHHHHHHHHHHHHH-hhheEE
Confidence 333 2222222 156655444455555 86555446777788877777776654 444333
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A .... |
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.34 Score=52.96 Aligned_cols=129 Identities=17% Similarity=0.394 Sum_probs=82.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG~qng~~~sg~~~g~ 307 (534)
+..++.||++|+.-|=++| ||...+...+..| .|..++++++.+++.|||+ |+.+|...|. -|+. .....
T Consensus 130 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~p~~Y---dWsgY~~L~~mvr~~GLKlq~VmSFHqCGGN-VGD~---~~IpL 201 (573)
T PLN00197 130 KASLQALKSAGVEGIMMDV-WWGLVERESPGVY---NWGGYNELLEMAKRHGLKVQAVMSFHQCGGN-VGDS---CTIPL 201 (573)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCCC-CCCc---ccccC
Confidence 6789999999999999999 7777776666677 5888999999999999985 6677875442 1111 11233
Q ss_pred CCCChhhHHHHHHHHHHHHH----HhcCC-----CeEEEEEeccCCCCCCC-ChHHHHHHHHHHHHHHHhcCCceEEEE
Q 009475 308 QEWGDSNVADTVAVIDFLAA----RYANR-----PSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 308 ~~W~~~~~~~~~~~w~~lA~----ryk~~-----~~vlg~eL~NEP~~~~~-~~~~~~~~~~~~~~aIR~~~p~~~Iiv 376 (534)
|.| +++...+ -|+|. +.-+.+-.-|+|...+- +.+.+.+|++..-+.....=.+.++-|
T Consensus 202 P~W----------V~~~g~~dpDifftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~DFM~SFr~~F~~~l~~~I~eI 270 (573)
T PLN00197 202 PKW----------VVEEVDKDPDLAYTDQWGRRNYEYVSLGCDTLPVLKGRTPVQCYADFMRAFRDNFKHLLGDTIVEI 270 (573)
T ss_pred CHH----------HHHhhccCCCceeecCCCCcccceeccccccccccCCCCHHHHHHHHHHHHHHHHHHHhcCceeEE
Confidence 444 1221111 13332 33455667788886543 356777777777777666423333333
|
|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.98 Score=52.55 Aligned_cols=146 Identities=18% Similarity=0.212 Sum_probs=80.8
Q ss_pred CHHHHHHHHhCCccEEEe-Cccc------ccccCCCC----CCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRI-PVGW------WIANDPTP----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGS 294 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRI-Pv~~------w~~~~~~~----~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~ 294 (534)
+++-+..|+++|+|+|=| ||.- |-. ++.. ...| +..+.|+++|+.|.++||+||||+ |..+..
T Consensus 419 ~e~~LdYLk~LGvt~IeLmPv~e~~~~~swGY-~~~~yfa~~~~y--Gtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d~ 495 (897)
T PLN02960 419 TQKVLPHVKKAGYNAIQLIGVQEHKDYSSVGY-KVTNFFAVSSRF--GTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADE 495 (897)
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCC-CcccCCCccccc--CCHHHHHHHHHHHHHCCCEEEEEecccccCCcc
Confidence 455689999999999997 5521 111 1110 0112 457899999999999999999997 655532
Q ss_pred CCCC----------CCCCCCCCCCCCC--------hhhHHHHHHHHHHHHHHhcCC-------CeEEEEE--eccCCC--
Q 009475 295 QNGN----------EHSATRDGFQEWG--------DSNVADTVAVIDFLAARYANR-------PSLAAIE--LINEPL-- 345 (534)
Q Consensus 295 qng~----------~~sg~~~g~~~W~--------~~~~~~~~~~w~~lA~ryk~~-------~~vlg~e--L~NEP~-- 345 (534)
.++. .+.+.......|. +...+..++..+...+.|.=+ .+++-.+ ...++.
T Consensus 496 ~~~L~~FDG~~~~Yf~~~~~g~~~~WG~~~fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~~ 575 (897)
T PLN02960 496 MVGLSLFDGSNDCYFHSGKRGHHKRWGTRMFKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGDL 575 (897)
T ss_pred ccchhhcCCCccceeecCCCCccCCCCCcccCCCCHHHHHHHHHHHHHHHHHHCCCceeecccceeeeeccCccccCCcc
Confidence 1111 1111111122354 233344555555555555432 2222111 001111
Q ss_pred ----CCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 346 ----APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 346 ----~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
....+ ..-..|++.+-+.|++..|+.++|.++
T Consensus 576 ~~~~n~~~d-~~Ai~fL~~lN~~v~~~~P~vilIAEd 611 (897)
T PLN02960 576 DEYCNQYVD-RDALIYLILANEMLHQLHPNIITIAED 611 (897)
T ss_pred cccCCccCC-chHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 00111 234567888888899999998888874
|
|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.35 Score=53.49 Aligned_cols=121 Identities=17% Similarity=0.402 Sum_probs=80.4
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG~qng~~~sg~~~g~ 307 (534)
+..++.||++|+.-|=++| ||...+...+..| .|..++++++.+++.||++ |+.+|...|. -|+. .....
T Consensus 289 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~gP~~Y---dWsgY~~L~~mvr~~GLKlqvVMSFHqCGGN-VGD~---~~IPL 360 (702)
T PLN02905 289 LKQLRILKSINVDGVKVDC-WWGIVEAHAPQEY---NWNGYKRLFQMVRELKLKLQVVMSFHECGGN-VGDD---VCIPL 360 (702)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCCC-CCCc---ccccC
Confidence 6889999999999999999 7777776666677 5888999999999999985 6677875442 1111 11223
Q ss_pred CCCChhhHHHHHHHHHHHHH----HhcCC-----CeEEEEEeccCCCCCC-CChHHHHHHHHHHHHHHHhc
Q 009475 308 QEWGDSNVADTVAVIDFLAA----RYANR-----PSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKY 368 (534)
Q Consensus 308 ~~W~~~~~~~~~~~w~~lA~----ryk~~-----~~vlg~eL~NEP~~~~-~~~~~~~~~~~~~~~aIR~~ 368 (534)
|.| +|+...+ -|+|. +.-+.+-.-++|...+ .+.+.+.+|++..-+.....
T Consensus 361 P~W----------V~e~g~~nPDifftDrsG~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~f 421 (702)
T PLN02905 361 PHW----------VAEIGRSNPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRVEFDEF 421 (702)
T ss_pred CHH----------HHHhhhcCCCceEecCCCCccCceeeeecccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 444 2221111 13332 3445577779997644 34567778887777777664
|
|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.44 Score=52.65 Aligned_cols=121 Identities=12% Similarity=0.306 Sum_probs=80.1
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCE--EEEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~--VIlDlH~~pG~qng~~~sg~~~g~ 307 (534)
+..++.||++|+.-|=++| ||...+...+..| .|..++++++.+++.||+ ||+.+|...|. -| +. .....
T Consensus 271 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mvr~~GLKlqvVmSFHqCGGN-VG-D~--~~IPL 342 (681)
T PLN02705 271 RQELSHMKSLNVDGVVVDC-WWGIVEGWNPQKY---VWSGYRELFNIIREFKLKLQVVMAFHEYGGN-AS-GN--VMISL 342 (681)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeEeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEeeccCCC-CC-Cc--ccccC
Confidence 6789999999999999999 7777776556677 588899999999999999 56777875442 11 11 11223
Q ss_pred CCCChhhHHHHHHHHHHHHH----HhcCC-----CeEEEEEeccCCCCCC-CChHHHHHHHHHHHHHHHhc
Q 009475 308 QEWGDSNVADTVAVIDFLAA----RYANR-----PSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKY 368 (534)
Q Consensus 308 ~~W~~~~~~~~~~~w~~lA~----ryk~~-----~~vlg~eL~NEP~~~~-~~~~~~~~~~~~~~~aIR~~ 368 (534)
|.|- |+...+ -|+|. ..-+.+-.-++|...+ .+.+.+.+|++..-+.....
T Consensus 343 P~WV----------~e~g~~nPDifftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~f 403 (681)
T PLN02705 343 PQWV----------LEIGKDNQDIFFTDREGRRNTECLSWSIDKERVLKGRTGIEVYFDFMRSFRSEFDDL 403 (681)
T ss_pred CHHH----------HHhcccCCCceeecCCCCcccceeeeecCcccccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4441 111110 13332 3445677779997543 44577788887777777764
|
|
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.4 Score=40.97 Aligned_cols=63 Identities=14% Similarity=0.279 Sum_probs=51.6
Q ss_pred cceeEEeeeeceeEEEeecCC---CceEEeccCCCCCcceEEEEEecCceEEEEee-CCcEEEeecC
Q 009475 65 GTQVQFMSTKFQKYIAAESGG---GTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQ 127 (534)
Q Consensus 65 g~~~~~~s~~~~~~~~a~~~g---~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~ 127 (534)
+....|+++..|+||.+..++ |+.|+.-......-..|+|.+.++++|.|+.. .++.+.+.++
T Consensus 14 ~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~~ 80 (105)
T PF14200_consen 14 DGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIEPVGDGYYRIRNKNSGKVLDVAGG 80 (105)
T ss_dssp TTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEEESTTSEEEEEETSTTEEEEEGGG
T ss_pred CCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEEEecCCeEEEEECCCCcEEEECCC
Confidence 457999999999999998864 66666554455888999999999999999988 6888888653
|
... |
| >COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.36 E-value=2.6 Score=43.90 Aligned_cols=187 Identities=18% Similarity=0.241 Sum_probs=93.2
Q ss_pred ccceeeecccCCCcchhhhhhccCCCCCHHHHHHH-H----hCCccEEEeCccc---ccccCCCCCCCCCCchHHHHHHH
Q 009475 202 RGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFL-S----SNGINAVRIPVGW---WIANDPTPPKPFVGGSSKVLDNA 273 (534)
Q Consensus 202 ~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~i-a----~~G~N~VRIPv~~---w~~~~~~~~~~~~~~~l~~ld~~ 273 (534)
..+.|...++|.- -+..|--+.+...++.+ . ++||..+||||.- |....+ .+ +++.|..+
T Consensus 41 ~~~~Q~IrGFGg~-----~~~Aw~g~lsaa~l~t~Fgng~~~lg~si~Rv~I~~ndfsl~g~~---d~----w~kels~A 108 (433)
T COG5520 41 AAKHQVIRGFGGM-----NSSAWAGDLSAAQLETLFGNGANQLGFSILRVPIDSNDFSLGGSA---DN----WYKELSTA 108 (433)
T ss_pred hhhhceeeccccc-----ccchhhhhhHHHHHHHHhcCCccccCceEEEEEecccccccCCCc---ch----hhhhcccc
Confidence 3445555666520 11234444444444443 2 4899999999963 322111 11 22222222
Q ss_pred HHHHHHCCCEEEEEcCCCCCCC--CCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCCC--
Q 009475 274 FDWAEKYGVKVIVDLHAAPGSQ--NGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG-- 348 (534)
Q Consensus 274 v~~a~~~Gl~VIlDlH~~pG~q--ng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~~-- 348 (534)
+-+.++|++|+-.--..|.+. ++.-+.| ..+.-. .+....+.+++......++++. .+.++.+-|||....
T Consensus 109 -k~~in~g~ivfASPWspPa~Mktt~~~ngg-~~g~Lk--~e~Ya~yA~~l~~fv~~m~~nGvnlyalSVQNEPd~~p~~ 184 (433)
T COG5520 109 -KSAINPGMIVFASPWSPPASMKTTNNRNGG-NAGRLK--YEKYADYADYLNDFVLEMKNNGVNLYALSVQNEPDYAPTY 184 (433)
T ss_pred -hhhcCCCcEEEecCCCCchhhhhccCcCCc-cccccc--hhHhHHHHHHHHHHHHHHHhCCCceeEEeeccCCcccCCC
Confidence 227789999999988888653 1111111 111110 2333445566666666677764 688899999998631
Q ss_pred ----CChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCC-CCh-hhhhcccCCC-ceEEEEEeeccc
Q 009475 349 ----VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGP-ADH-KELLSFASGL-SRVVIDVHYYNL 407 (534)
Q Consensus 349 ----~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~-~~~-~~~~~~~~~~-~nvv~d~H~Y~~ 407 (534)
-.+++..+|+.+-.. .+..+.-|++.+.... .+. +..+.-+... .=.++..|.|..
T Consensus 185 d~~~wtpQe~~rF~~qyl~---si~~~~rV~~pes~~~~~~~~dp~lnDp~a~a~~~ilg~H~Ygg 247 (433)
T COG5520 185 DWCWWTPQEELRFMRQYLA---SINAEMRVIIPESFKDLPNMSDPILNDPKALANMDILGTHLYGG 247 (433)
T ss_pred CcccccHHHHHHHHHHhhh---hhccccEEecchhcccccccccccccCHhHhcccceeEeeeccc
Confidence 123444455444333 3333444555432211 111 1111111111 234789999953
|
|
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
Probab=94.18 E-value=1.3 Score=53.13 Aligned_cols=102 Identities=16% Similarity=0.208 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHCCCEEEEEc---CCCCCCCC-----CC----CCCCCCC---CCCCCC---hhhHHHHHHHHHHHHHH
Q 009475 267 SKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN-----GN----EHSATRD---GFQEWG---DSNVADTVAVIDFLAAR 328 (534)
Q Consensus 267 l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qn-----g~----~~sg~~~---g~~~W~---~~~~~~~~~~w~~lA~r 328 (534)
.+.|+++|+.|+++||+||||+ |..+.+.. +. +..|... +..... +..++..++..+..++.
T Consensus 554 i~EfK~LV~alH~~GI~VILDVVyNHt~~~~~f~~~~p~Yy~~~~~~G~~~~~~~g~~l~~e~~~vrk~iiDsl~yWv~e 633 (1111)
T TIGR02102 554 IAEFKNLINEIHKRGMGVILDVVYNHTAKVYIFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHEMSRRILVDSIKYLVDE 633 (1111)
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccccccccccCCCceEeeCCCCCcccccCCCCCCcCCHHHHHHHHHHHHHHHHh
Confidence 6789999999999999999997 65432210 00 0001000 000000 23344455666666666
Q ss_pred hcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCC
Q 009475 329 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 380 (534)
Q Consensus 329 yk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~ 380 (534)
|+=+. +-||++.. .+. .+++.+..++++++|+.+++ +.+|
T Consensus 634 y~VDG--FRfDl~g~-----~d~----~~~~~~~~~l~~~dP~~~li-GE~W 673 (1111)
T TIGR02102 634 FKVDG--FRFDMMGD-----HDA----ASIEIAYKEAKAINPNIIMI-GEGW 673 (1111)
T ss_pred cCCcE--EEEecccc-----CCH----HHHHHHHHHHHHhCcCEEEE-Eecc
Confidence 65432 23677753 222 34566677788889976554 4444
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645). |
| >KOG2233 consensus Alpha-N-acetylglucosaminidase [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.59 Score=50.22 Aligned_cols=149 Identities=18% Similarity=0.265 Sum_probs=99.2
Q ss_pred HHHHHHHHhCCccEEEeCccc---cc-c-c---------C-----C------------CCCCCCCC----chHHHHHHHH
Q 009475 230 DEDFKFLSSNGINAVRIPVGW---WI-A-N---------D-----P------------TPPKPFVG----GSSKVLDNAF 274 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~---w~-~-~---------~-----~------------~~~~~~~~----~~l~~ld~~v 274 (534)
|..++.||=+|+|.+=-|.+= |. . + + | .-++|..+ ..+-.=+++|
T Consensus 81 eR~iDWmALnGinl~la~~gQEaIWqkVf~~lgl~~eeldeyftgpAflAW~RMGNl~awgGpLs~aw~~~ql~LqkrIi 160 (666)
T KOG2233|consen 81 EREIDWMALNGINLVLAPLGQEAIWQKVFMGLGLQREELDEYFTGPAFLAWHRMGNLHAWGGPLSPAWMLNQLLLQKRII 160 (666)
T ss_pred HhHhhHHHHcCcceeeccchhHHHHHHHHHHcCCCHHHHHHhcccHHHHHHHHhcCccccCCCCCHHHHHHHHHHHHHHH
Confidence 889999999999999888552 11 0 0 0 0 00123322 2344457899
Q ss_pred HHHHHCCCEEEEEcCC--C--------CCCC----CCCCCCCCCCCCC----CCChhhHHHHHHHHHHHHHHhcCCCeEE
Q 009475 275 DWAEKYGVKVIVDLHA--A--------PGSQ----NGNEHSATRDGFQ----EWGDSNVADTVAVIDFLAARYANRPSLA 336 (534)
Q Consensus 275 ~~a~~~Gl~VIlDlH~--~--------pG~q----ng~~~sg~~~g~~----~W~~~~~~~~~~~w~~lA~ryk~~~~vl 336 (534)
+...+.||.++|--.+ . |.+. ..+++..++.... ...+-.++---.+++.+.+.|++..+|.
T Consensus 161 drm~~lGmTpvLPaFaG~VP~al~rlfPesnf~rl~rWn~f~s~~~C~l~v~P~dplF~eIgs~Flr~~~kefG~~tniy 240 (666)
T KOG2233|consen 161 DRMLELGMTPVLPAFAGHVPDALERLFPESNFTRLPRWNNFTSRYSCMLLVSPFDPLFQEIGSTFLRHQIKEFGGVTNIY 240 (666)
T ss_pred HHHHHcCCCccchhhccccHHHHHHhCchhceeeccccCCCCcceeeeEEccCCcchHHHHHHHHHHHHHHHhCCccccc
Confidence 9999999999985432 1 2211 0111111110000 0012345556679999999999999999
Q ss_pred EEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 337 AIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 337 g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
.-|.+||-..+...++-++...+.+|++.+++|++.+-++.+
T Consensus 241 ~~DpFNE~~Pp~sepey~~staaAiyesm~kvdknaVWllQg 282 (666)
T KOG2233|consen 241 SADPFNEILPPESEPEYVKSTAAAIYESMKKVDKNAVWLLQG 282 (666)
T ss_pred ccCcccccCCCCCChHHHHHHHHHHHHHHhccCcceEEeeec
Confidence 999999988777778889999999999999999998776653
|
|
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.16 Score=57.87 Aligned_cols=68 Identities=25% Similarity=0.367 Sum_probs=47.3
Q ss_pred CCCCHHHHHHHHhCCccEEEe-CcccccccC--------------C------CC---CCCCCCchHHHHHHHHHHHHHCC
Q 009475 226 SYITDEDFKFLSSNGINAVRI-PVGWWIAND--------------P------TP---PKPFVGGSSKVLDNAFDWAEKYG 281 (534)
Q Consensus 226 ~~ite~d~~~ia~~G~N~VRI-Pv~~w~~~~--------------~------~~---~~~~~~~~l~~ld~~v~~a~~~G 281 (534)
.+..+..++.|+++|+++|.| ||..+...+ | .+ ..|.-.+....|+.+|+.+.++|
T Consensus 199 gl~~~~~i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP~~fFAp~~~Yss~p~p~~~i~EfK~mV~~lHkaG 278 (697)
T COG1523 199 GLAEPVIIDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDPLNFFAPEGRYASNPEPATRIKEFKDMVKALHKAG 278 (697)
T ss_pred hhccccHHHHHHHhCCceEEEecceEEeccccccccccccccCCCcccccCCCccccCCCCcchHHHHHHHHHHHHHHcC
Confidence 334555699999999999996 775432211 1 00 01111236889999999999999
Q ss_pred CEEEEEc---CCCCC
Q 009475 282 VKVIVDL---HAAPG 293 (534)
Q Consensus 282 l~VIlDl---H~~pG 293 (534)
|.||||+ |.+.|
T Consensus 279 I~VILDVVfNHTae~ 293 (697)
T COG1523 279 IEVILDVVFNHTAEG 293 (697)
T ss_pred CEEEEEEeccCcccc
Confidence 9999998 87644
|
|
| >COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.93 E-value=4.4 Score=40.74 Aligned_cols=209 Identities=17% Similarity=0.265 Sum_probs=123.6
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
..|++.|+..+. .||+ | . . .-..|..+...+.+.|++|+|-+--.+..+
T Consensus 66 ~sDLe~l~~~t~-~IR~---Y-~-s-----------DCn~le~v~pAa~~~g~kv~lGiw~tdd~~-------------- 114 (305)
T COG5309 66 ASDLELLASYTH-SIRT---Y-G-S-----------DCNTLENVLPAAEASGFKVFLGIWPTDDIH-------------- 114 (305)
T ss_pred HhHHHHhccCCc-eEEE---e-e-c-----------cchhhhhhHHHHHhcCceEEEEEeeccchh--------------
Confidence 679999999887 8998 1 1 1 123478888999999999999876433211
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-CCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCC-Chhh
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPA-DHKE 387 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~-~~~~ 387 (534)
...++ .+..++ .-|.+-+.|..+-+-||-... ..+.+++-++..++-.++.+.+-+.+|.-.+.|... +-.+
T Consensus 115 ---~~~~~--til~ay-~~~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~vrsav~~agy~gpV~T~dsw~~~~~np~ 188 (305)
T COG5309 115 ---DAVEK--TILSAY-LPYNGWDDVTTVTVGNEALNRNDLTASQLIEYIDDVRSAVKEAGYDGPVTTVDSWNVVINNPE 188 (305)
T ss_pred ---hhHHH--HHHHHH-hccCCCCceEEEEechhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCCceeecccceeeeCChH
Confidence 11222 122222 234566788889899998653 467899999999999999988887776655555321 1122
Q ss_pred hhcccCCCceEEEEEeecccCCCCCCCCchhhhHH-HHHhhhhhhhhhhhccCC--CeEEEeecccchhhhhhhhhhhhh
Q 009475 388 LLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNID-YVNNQRASDLGAVTTSNG--PLTFVGKSVTSALICKRCTQIRIR 464 (534)
Q Consensus 388 ~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~-~i~~~~~~~l~~~~~~~g--p~~~vgEws~a~tdc~~~~~~~~~ 464 (534)
+.+ ..+.++.-.|.| | ..++..+... ++. .+++.+....+ +..+++|
T Consensus 189 l~~---~SDfia~N~~aY--w----d~~~~a~~~~~f~~----~q~e~vqsa~g~~k~~~v~E----------------- 238 (305)
T COG5309 189 LCQ---ASDFIAANAHAY--W----DGQTVANAAGTFLL----EQLERVQSACGTKKTVWVTE----------------- 238 (305)
T ss_pred Hhh---hhhhhhcccchh--c----cccchhhhhhHHHH----HHHHHHHHhcCCCccEEEee-----------------
Confidence 222 336788889999 3 2333333222 221 11222222222 2234333
Q ss_pred hcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCCcEEEE
Q 009475 465 KRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYW 511 (534)
Q Consensus 465 ~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fW 511 (534)
.+||- =|+ .++...+++++...|++..+.+..+.+..-++-
T Consensus 239 --tGWPS-~G~---~~G~a~pS~anq~~~~~~i~~~~~~~G~d~fvf 279 (305)
T COG5309 239 --TGWPS-DGR---TYGSAVPSVANQKIAVQEILNALRSCGYDVFVF 279 (305)
T ss_pred --ccCCC-CCC---ccCCcCCChhHHHHHHHHHHhhhhccCccEEEe
Confidence 01110 011 122234668888899999988888766665554
|
|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=1.4 Score=53.30 Aligned_cols=145 Identities=21% Similarity=0.261 Sum_probs=79.2
Q ss_pred HHHHHHHHhCCccEEEe-Ccc------cccccCCCC----CCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI-PVG------WWIANDPTP----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ 295 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~------~w~~~~~~~----~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~q 295 (534)
++-++.|+++|+|+|=| ||. .|-. ++.. ...| +..+.|+++|+.|.++||+||||+ |..+...
T Consensus 769 ~~lldYlk~LGvt~IeLmPv~e~p~~~swGY-~~~~y~ap~~ry--Gt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~~ 845 (1224)
T PRK14705 769 KELVDYVKWLGFTHVEFMPVAEHPFGGSWGY-QVTSYFAPTSRF--GHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDSW 845 (1224)
T ss_pred HHHHHHHHHhCCCEEEECccccCCCCCCCCC-CccccCCcCccc--CCHHHHHHHHHHHHHCCCEEEEEeccccCCcchh
Confidence 45579999999999976 662 1311 1111 1112 468899999999999999999997 5433210
Q ss_pred -----CC---CCCCCCC-CCCCCCC--------hhhHHHHHHHHHHHHHHhcCCC----eEEE---EEec-----cCCCC
Q 009475 296 -----NG---NEHSATR-DGFQEWG--------DSNVADTVAVIDFLAARYANRP----SLAA---IELI-----NEPLA 346 (534)
Q Consensus 296 -----ng---~~~sg~~-~g~~~W~--------~~~~~~~~~~w~~lA~ryk~~~----~vlg---~eL~-----NEP~~ 346 (534)
.| ..|.... ...+.|. +...+..++......++|.=+. .|.. .+-- -.|+.
T Consensus 846 ~l~~fdg~~~y~~~d~~~g~~~~Wg~~~fn~~~~eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~ 925 (1224)
T PRK14705 846 ALAQFDGQPLYEHADPALGEHPDWGTLIFDFGRTEVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNR 925 (1224)
T ss_pred hhhhcCCCcccccCCcccCCCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhcccccccccccccc
Confidence 00 0111111 1123453 2333444455555555554321 1110 0100 11221
Q ss_pred CC--CChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 347 PG--VALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 347 ~~--~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
.+ .+ ..=..|.+++.+.|++..|+.++|.+.
T Consensus 926 ~gg~en-~~ai~fl~~ln~~v~~~~p~~~~IAEe 958 (1224)
T PRK14705 926 FGGREN-LEAISFLQEVNATVYKTHPGAVMIAEE 958 (1224)
T ss_pred cCCccC-hHHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 11 12 233578899999999999998877763
|
|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=93.86 E-value=1.6 Score=50.27 Aligned_cols=147 Identities=14% Similarity=0.202 Sum_probs=78.8
Q ss_pred CHHHHHHHHhCCccEEEe-Ccc------cccccCCCCCCCCC--CchHHHHHHHHHHHHHCCCEEEEEc---CCCCCCC-
Q 009475 229 TDEDFKFLSSNGINAVRI-PVG------WWIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ- 295 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRI-Pv~------~w~~~~~~~~~~~~--~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~q- 295 (534)
.++-+..|+++|+|+|=| ||. .|-. ++....... -+..+.|+++|+.|.++||+||||+ |..+...
T Consensus 272 a~~ll~ylk~LGvt~I~LmPi~e~~~~~~wGY-~~~~~~a~~~~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~~ 350 (730)
T PRK12568 272 AEQLIPYVQQLGFTHIELLPITEHPFGGSWGY-QPLGLYAPTARHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHG 350 (730)
T ss_pred HHHHHHHHHHcCCCEEEECccccCCCCCCCCC-CCCcCCccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccCCccccc
Confidence 355689999999999986 552 1211 111100001 1568899999999999999999997 5433210
Q ss_pred -CCCC------CCCCCCC-CCCCC--------hhhHHHHHHHHHHHHHHhcCCC-------eEEEEE--------eccCC
Q 009475 296 -NGNE------HSATRDG-FQEWG--------DSNVADTVAVIDFLAARYANRP-------SLAAIE--------LINEP 344 (534)
Q Consensus 296 -ng~~------~sg~~~g-~~~W~--------~~~~~~~~~~w~~lA~ryk~~~-------~vlg~e--------L~NEP 344 (534)
..++ +...+.+ ...|. +...+..++....-.++|.=+. .++-.+ +-|+-
T Consensus 351 l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~ 430 (730)
T PRK12568 351 LAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAH 430 (730)
T ss_pred cccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhcccccccccccccc
Confidence 0011 1111111 22343 2333444444444445443221 111000 11221
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 345 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
.. ..+ ..-..+.+++-++|++..|+.++|-+.
T Consensus 431 gg-~en-~ea~~Fl~~ln~~v~~~~P~~~~IAEe 462 (730)
T PRK12568 431 GG-REN-LEAVAFLRQLNREIASQFPGVLTIAEE 462 (730)
T ss_pred CC-ccC-hHHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 10 111 134578999999999999998888763
|
|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=93.68 E-value=7.9 Score=40.19 Aligned_cols=139 Identities=16% Similarity=0.164 Sum_probs=72.9
Q ss_pred HHHHHHHHhCCccEEEeCcccc---cccC-CCCCC-CC--CCchHHHHHHHHHHHHHCCCEEEEEcCCCCCC----CCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWW---IAND-PTPPK-PF--VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS----QNGN 298 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w---~~~~-~~~~~-~~--~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~----qng~ 298 (534)
++-++.|++.|+|+|=|.|-=. ...+ ..+.. .. .......++++++.++++|||+|-=+..+... .+..
T Consensus 16 ~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARIv~FkD~~la~~~pe 95 (316)
T PF13200_consen 16 DKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARIVVFKDPVLAEAHPE 95 (316)
T ss_pred HHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEEEEecChHHhhhChh
Confidence 6788999999999999977310 0010 00100 00 11123668999999999999999655433210 0000
Q ss_pred C----CCCC--CC-CCCCCC----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC-------------CCCCChHHH
Q 009475 299 E----HSAT--RD-GFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIELINEPL-------------APGVALDTL 354 (534)
Q Consensus 299 ~----~sg~--~~-g~~~W~----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~-------------~~~~~~~~~ 354 (534)
. ..|. ++ ....|- ++..+..+++-+.+|+. +...|. ||=+==|. ......+.+
T Consensus 96 ~av~~~~G~~w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~--GFdEIq-fDYIRFP~~~~~~~l~y~~~~~~~~r~~aI 172 (316)
T PF13200_consen 96 WAVKTKDGSVWRDNEGEAWVNPYSKEVWDYNIDIAKEAAKL--GFDEIQ-FDYIRFPDEGRLSGLDYSENDTEESRVDAI 172 (316)
T ss_pred hEEECCCCCcccCCCCCccCCCCCHHHHHHHHHHHHHHHHc--CCCEEE-eeeeecCCCCcccccccCCCCCcchHHHHH
Confidence 0 0110 00 112355 23344445555555542 222222 22222222 111134788
Q ss_pred HHHHHHHHHHHHhcCCc
Q 009475 355 KSYYKAGYDAVRKYTST 371 (534)
Q Consensus 355 ~~~~~~~~~aIR~~~p~ 371 (534)
..|.+.+.+.++..+-.
T Consensus 173 ~~Fl~~a~~~l~~~~v~ 189 (316)
T PF13200_consen 173 TDFLAYAREELHPYGVP 189 (316)
T ss_pred HHHHHHHHHHHhHcCCC
Confidence 99999999999987654
|
|
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.57 Score=51.18 Aligned_cols=151 Identities=18% Similarity=0.227 Sum_probs=93.5
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+--++-.++.|+|++|+ |. ++-|. =|..-+.|.+.||-|.=|+.-+..- +|.
T Consensus 360 ~~LL~Sv~e~~MN~lRV----WG------GGvYE------sd~FY~lad~lGilVWQD~MFACAl------------YPt 411 (867)
T KOG2230|consen 360 EFLLDSVAEVGMNMLRV----WG------GGVYE------SDYFYQLADSLGILVWQDMMFACAL------------YPT 411 (867)
T ss_pred HHHHHHHHHhCcceEEE----ec------Ccccc------chhHHHHhhhccceehhhhHHHhhc------------ccC
Confidence 34456678999999999 52 12332 2566778999999999888754321 000
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-------------CCChHHHHHHHHHHHHHHH-hcCCceEEE
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-------------GVALDTLKSYYKAGYDAVR-KYTSTAYVI 375 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-------------~~~~~~~~~~~~~~~~aIR-~~~p~~~Ii 375 (534)
.+...+...+=.+.=+.|.+.+|.|+.|---||-... ....+...-+|++.+..+. +.++.++.|
T Consensus 412 -~~eFl~sv~eEV~yn~~Rls~HpSviIfsgNNENEaAl~~nWy~~sf~~~~~~~kdyvlly~~~i~el~l~~~~srPfi 490 (867)
T KOG2230|consen 412 -NDEFLSSVREEVRYNAMRLSHHPSVIIFSGNNENEAALVQNWYGTSFERDRFESKDYVLLYANVIHELKLVSHSSRPFI 490 (867)
T ss_pred -cHHHHHHHHHHHHHHHHhhccCCeEEEEeCCCccHHHHHhhhhcccccccchhhhhhhHHHHHHHHHHHhhcCCCCCce
Confidence 0234445555566778899999999999988886531 1122445556666555544 445778877
Q ss_pred EeCCCCCC--ChhhhhcccCCCceEEEEEeecccCCC
Q 009475 376 MSNRLGPA--DHKELLSFASGLSRVVIDVHYYNLFSN 410 (534)
Q Consensus 376 v~~~~~~~--~~~~~~~~~~~~~nvv~d~H~Y~~f~~ 410 (534)
++.+-.+. .+..+..- .+.+|--=|+|+|.-+.+
T Consensus 491 ~SSPsNG~ete~e~~VS~-NP~dn~~GDVHfYdy~~d 526 (867)
T KOG2230|consen 491 VSSPSNGKETEPENYVSS-NPQDNQNGDVHFYDYTKD 526 (867)
T ss_pred ecCCCCCcccCccccccC-CCccccCCceEeeehhhc
Confidence 76432221 12222221 455677779999986543
|
|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.15 Score=51.45 Aligned_cols=58 Identities=26% Similarity=0.393 Sum_probs=39.7
Q ss_pred HHHHHHHhCCccEEEeCcccccc-----cCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIPVGWWIA-----NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~w~~-----~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+|+|-|+=-+... ..+..-...++ +..+.|+++|+.|+++||+||+|+
T Consensus 8 ~kLdyl~~lGv~~I~l~Pi~~~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~ 72 (316)
T PF00128_consen 8 DKLDYLKDLGVNAIWLSPIFESPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDV 72 (316)
T ss_dssp HTHHHHHHHTESEEEESS-EESSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCceecccccccccccccccceeeeccccccchhhhhhhhhhccccccceEEEee
Confidence 45889999999999995221100 00000000111 679999999999999999999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=93.03 E-value=3 Score=47.51 Aligned_cols=145 Identities=15% Similarity=0.198 Sum_probs=77.4
Q ss_pred HHHHHHHHhCCccEEEe-Ccc------cccccCCCC----CCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI-PVG------WWIANDPTP----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ 295 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~------~w~~~~~~~----~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~q 295 (534)
++-+..|+++|+|+|=| ||. .|.. ++.. ...| +..+.|+++|+.|.++||+||||+ |..+..
T Consensus 171 ~~l~~ylk~lG~t~velmPv~e~~~~~~wGY-~~~~~~~~~~~~--g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~~- 246 (639)
T PRK14706 171 HRLGEYVTYMGYTHVELLGVMEHPFDGSWGY-QVTGYYAPTSRL--GTPEDFKYLVNHLHGLGIGVILDWVPGHFPTDE- 246 (639)
T ss_pred HHHHHHHHHcCCCEEEccchhcCCCCCCCCc-Cccccccccccc--CCHHHHHHHHHHHHHCCCEEEEEecccccCcch-
Confidence 44467899999999986 552 1211 1110 0112 468899999999999999999997 543321
Q ss_pred CCCCC---------CCCCCC-CCCCC--------hhhHHHHHHHHHHHHHHhcCCC-------eEEEEEec---cCCCCC
Q 009475 296 NGNEH---------SATRDG-FQEWG--------DSNVADTVAVIDFLAARYANRP-------SLAAIELI---NEPLAP 347 (534)
Q Consensus 296 ng~~~---------sg~~~g-~~~W~--------~~~~~~~~~~w~~lA~ryk~~~-------~vlg~eL~---NEP~~~ 347 (534)
++..+ .....+ ...|. +..++..++..+.-.+.|.=+. .++-.+-- -.|...
T Consensus 247 ~~l~~~dg~~~y~~~~~~~g~~~~w~~~~~~~~~~eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~ 326 (639)
T PRK14706 247 SGLAHFDGGPLYEYADPRKGYHYDWNTYIFDYGRNEVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIH 326 (639)
T ss_pred hhhhccCCCcceeccCCcCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCccccccccc
Confidence 11100 000001 12343 2334444455555555554221 11101100 011111
Q ss_pred -CCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 348 -GVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 348 -~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
+.....-..+.+.+-++||+..|+.++|.+.
T Consensus 327 gg~~n~~a~~fl~~ln~~v~~~~p~~~~iAE~ 358 (639)
T PRK14706 327 GGRENLEAIAFLKRLNEVTHHMAPGCMMIAEE 358 (639)
T ss_pred CCcccHHHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 1112344578899999999999998777753
|
|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.4 Score=51.90 Aligned_cols=63 Identities=21% Similarity=0.248 Sum_probs=44.0
Q ss_pred HHHHHHHHhCCccEEEeCccccccc----CCCCCCCCCC---chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIAN----DPTPPKPFVG---GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~----~~~~~~~~~~---~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
.+.+..|+++|+++|=||=.+.... ++..-...++ |..+.|+++|+.|+++||+||+|+ |..+
T Consensus 47 ~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDvV~NH~~~ 119 (428)
T PLN00196 47 MGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADIVINHRTA 119 (428)
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEECccCccc
Confidence 5678999999999999974332110 1110011111 567899999999999999999997 6543
|
|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.49 E-value=1.6 Score=49.19 Aligned_cols=141 Identities=21% Similarity=0.275 Sum_probs=78.7
Q ss_pred CHHHHHHHHhCCccEEEe-Cccc------ccccCCC----CCCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRI-PVGW------WIANDPT----PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGS 294 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRI-Pv~~------w~~~~~~----~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~ 294 (534)
+++-+..||++|+++|=| ||.- |-. ++. |...| +.-+.|+++|+.|.++||.||||. |-.|.
T Consensus 167 a~~llpYl~elG~T~IELMPv~e~p~~~sWGY-q~~g~yAp~sry--GtPedfk~fVD~aH~~GIgViLD~V~~HF~~d- 242 (628)
T COG0296 167 AIELLPYLKELGITHIELMPVAEHPGDRSWGY-QGTGYYAPTSRY--GTPEDFKALVDAAHQAGIGVILDWVPNHFPPD- 242 (628)
T ss_pred HHHHhHHHHHhCCCEEEEcccccCCCCCCCCC-CcceeccccccC--CCHHHHHHHHHHHHHcCCEEEEEecCCcCCCC-
Confidence 466788899999999996 6631 211 111 11223 568899999999999999999997 44332
Q ss_pred CCCCC---------CCCCCCC-CCCCC---hhh-HHHHHHHHHHHHH----Hh---------------cCCCeEEEEEec
Q 009475 295 QNGNE---------HSATRDG-FQEWG---DSN-VADTVAVIDFLAA----RY---------------ANRPSLAAIELI 341 (534)
Q Consensus 295 qng~~---------~sg~~~g-~~~W~---~~~-~~~~~~~w~~lA~----ry---------------k~~~~vlg~eL~ 341 (534)
.++.. +...+.+ .+.|. ..+ .....+++-.-|. +| .+...--+..+.
T Consensus 243 ~~~L~~fdg~~~~e~~~~~~~~~~~Wg~~i~~~gr~EVR~Fll~nal~Wl~~yHiDGlRvDAV~smly~d~~~~~~~~~~ 322 (628)
T COG0296 243 GNYLARFDGTFLYEHEDPRRGEHTDWGTAIFNYGRNEVRNFLLANALYWLEEYHIDGLRVDAVASMLYLDYSRAEGEWVP 322 (628)
T ss_pred cchhhhcCCccccccCCcccccCCCcccchhccCcHHHHHHHHHHHHHHHHHhCCcceeeehhhhhhccchhhhhhcccc
Confidence 12111 1111111 34565 111 3333333333322 22 221111223455
Q ss_pred cCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEE
Q 009475 342 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 375 (534)
Q Consensus 342 NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Ii 375 (534)
||+.. -..-....+.+.+-+.|+...|..+.|
T Consensus 323 n~~gg--r~n~~a~efl~~~n~~i~~~~pg~~~i 354 (628)
T COG0296 323 NEYGG--RENLEAAEFLRNLNSLIHEEEPGAMTI 354 (628)
T ss_pred cccCC--cccHHHHHHhhhhhhhhcccCCCceee
Confidence 66653 223456678888999999887766433
|
|
| >PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=91.98 E-value=3.1 Score=41.32 Aligned_cols=134 Identities=19% Similarity=0.262 Sum_probs=72.5
Q ss_pred HHHHHHHHhcCCCeEEEEEeccCCCCCC---CChHHHHHHHHHHHHHHHhcCCceEEEEeCCC--CCC------C-hhhh
Q 009475 321 VIDFLAARYANRPSLAAIELINEPLAPG---VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL--GPA------D-HKEL 388 (534)
Q Consensus 321 ~w~~lA~ryk~~~~vlg~eL~NEP~~~~---~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~--~~~------~-~~~~ 388 (534)
.++.+.+.-.+.+.|+ .+|||.... .+++...+.+++.++.+|. +...|+ ++.. ... . ...|
T Consensus 55 ~~~~v~~~~~~~~~ll---~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~--~~~~l~-sPa~~~~~~~~~~g~~Wl~~F 128 (239)
T PF11790_consen 55 WLANVQNAHPGSKHLL---GFNEPDLPGQSNMSPEEAAALWKQYMNPLRS--PGVKLG-SPAVAFTNGGTPGGLDWLSQF 128 (239)
T ss_pred HHHHHHhhccCcccee---eecCCCCCCCCCCCHHHHHHHHHHHHhHhhc--CCcEEE-CCeecccCCCCCCccHHHHHH
Confidence 4445544422334555 579999753 5677778888888888884 433333 3322 111 1 1233
Q ss_pred hcccC-CCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcc
Q 009475 389 LSFAS-GLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRN 467 (534)
Q Consensus 389 ~~~~~-~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~ 467 (534)
+.... ...--++++|.|.. ..+...+++.... +..++++.
T Consensus 129 ~~~~~~~~~~D~iavH~Y~~--------~~~~~~~~i~~~~--------~~~~kPIW----------------------- 169 (239)
T PF11790_consen 129 LSACARGCRVDFIAVHWYGG--------DADDFKDYIDDLH--------NRYGKPIW----------------------- 169 (239)
T ss_pred HHhcccCCCccEEEEecCCc--------CHHHHHHHHHHHH--------HHhCCCEE-----------------------
Confidence 33222 34567899999911 1222233333221 11234455
Q ss_pred cccccccccccccCCCcccHHHHHHHHHHHHHHHhcC
Q 009475 468 LWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRA 504 (534)
Q Consensus 468 ~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~ 504 (534)
|-||++.......+.+....|++..+..+++.
T Consensus 170 -----ITEf~~~~~~~~~~~~~~~~fl~~~~~~ld~~ 201 (239)
T PF11790_consen 170 -----ITEFGCWNGGSQGSDEQQASFLRQALPWLDSQ 201 (239)
T ss_pred -----EEeecccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 45554432223456677889999888888763
|
|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=91.84 E-value=3.9 Score=42.35 Aligned_cols=147 Identities=20% Similarity=0.187 Sum_probs=83.7
Q ss_pred HHHHHHHHhCCccEEEeCccccc--cc----CCCC----CCCCCCchHHHHHHHHHHHHHCCCEEEEEc----CCCCCC-
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWI--AN----DPTP----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGS- 294 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~--~~----~~~~----~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl----H~~pG~- 294 (534)
++.++.++++|||+|=+-|-... +. .|.. +.+.....++.|..+|+.|+++||.|.-=+ -..+.+
T Consensus 22 ~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~~~~~~~~ 101 (311)
T PF02638_consen 22 DEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGFNAPDVSH 101 (311)
T ss_pred HHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeecCCCchhh
Confidence 56788899999999987664210 00 0100 011112258899999999999999986322 000000
Q ss_pred ---CCCC----CCCCCC--C----CCCCCC----hhhHHHHHHHHHHHHHHhcCCCeEEEEE-ec--------cC-----
Q 009475 295 ---QNGN----EHSATR--D----GFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIE-LI--------NE----- 343 (534)
Q Consensus 295 ---qng~----~~sg~~--~----g~~~W~----~~~~~~~~~~w~~lA~ryk~~~~vlg~e-L~--------NE----- 343 (534)
.... .+.+.. . +...|. |+.++..+++.+.|+++|. -..|. +| .+ ++
T Consensus 102 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd-vDGIh-lDdy~yp~~~~g~~~~~~~~ 179 (311)
T PF02638_consen 102 ILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD-VDGIH-LDDYFYPPPSFGYDFPDVAA 179 (311)
T ss_pred hhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC-CCeEE-ecccccccccCCCCCccHHH
Confidence 0000 111100 0 112232 6777888999999999995 33332 22 00 00
Q ss_pred --------CCCCCCC-------hHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 344 --------PLAPGVA-------LDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 344 --------P~~~~~~-------~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
|.....+ .+.+..+.++++++|+++.|+..+-+++
T Consensus 180 y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~~ik~~kP~v~~sisp 229 (311)
T PF02638_consen 180 YEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYDAIKAIKPWVKFSISP 229 (311)
T ss_pred HHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 1100011 2455688999999999999998887764
|
|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=91.82 E-value=2.6 Score=38.06 Aligned_cols=103 Identities=16% Similarity=0.228 Sum_probs=60.9
Q ss_pred HHHHHHHHhCCccEEEeCcc---cccccCC--CCCCCCCCchHHHHHHHHHHHHHCCCEEEEE--cCC-------CCCC-
Q 009475 230 DEDFKFLSSNGINAVRIPVG---WWIANDP--TPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD--LHA-------APGS- 294 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~---~w~~~~~--~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlD--lH~-------~pG~- 294 (534)
++-++.+++.|+|+|-|... -+.+.+. .+..|... .+.|.++|+.|++.||+|++= ++. -|..
T Consensus 3 ~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~--~Dllge~v~a~h~~Girv~ay~~~~~d~~~~~~HPeW~ 80 (132)
T PF14871_consen 3 EQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLK--RDLLGEQVEACHERGIRVPAYFDFSWDEDAAERHPEWF 80 (132)
T ss_pred HHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCC--cCHHHHHHHHHHHCCCEEEEEEeeecChHHHHhCCcee
Confidence 45577899999999999553 1222221 11233332 688999999999999999973 331 1221
Q ss_pred ---CCCCCCCCCCCCCCCCC-----hhhHHHHHHHHHHHHHHhcCCCeE
Q 009475 295 ---QNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLAARYANRPSL 335 (534)
Q Consensus 295 ---qng~~~sg~~~g~~~W~-----~~~~~~~~~~w~~lA~ryk~~~~v 335 (534)
.+|....+.....+.|. ..+.+...+.++.+.++| +-..|
T Consensus 81 ~~~~~G~~~~~~~~~~~~~~~~c~ns~Y~e~~~~~i~Ei~~~y-~~DGi 128 (132)
T PF14871_consen 81 VRDADGRPMRGERFGYPGWYTCCLNSPYREFLLEQIREILDRY-DVDGI 128 (132)
T ss_pred eECCCCCCcCCCCcCCCCceecCCCccHHHHHHHHHHHHHHcC-CCCEE
Confidence 11111111112222343 456778888889999998 33344
|
|
| >PF07468 Agglutinin: Agglutinin; InterPro: IPR008998 Agglutinins are sugar-specific lectins that can agglutinate erythrocytes and other cell types | Back alignment and domain information |
|---|
Probab=91.76 E-value=1.7 Score=39.93 Aligned_cols=101 Identities=17% Similarity=0.171 Sum_probs=65.9
Q ss_pred EEeeeeceeEEEeecCCCc---eEEeccC-CCCCcceEEEEE--ecCceEEEEee-CCcEEEeecCCCCceEEEeecCCC
Q 009475 69 QFMSTKFQKYIAAESGGGT---IVVANRT-SASGWETFRLWR--VNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAG 141 (534)
Q Consensus 69 ~~~s~~~~~~~~a~~~g~~---~~~anr~-~~~~wetf~~~~--~~~~~~~~~~~-n~~~v~~~~~g~~~~~~a~~~~~~ 141 (534)
-+||--|||||++-..+.. -|--+-+ ...++-.|++.. ..+|.+.+|.. +|||.-... +++--|.|.++.|.
T Consensus 8 V~fkg~N~kYLry~~e~~~~~~~LqF~~edi~dP~v~fev~~~~~~dG~V~Ir~~y~nKfWrr~s-~n~~WI~ada~~p~ 86 (153)
T PF07468_consen 8 VAFKGDNGKYLRYRTEDIQQYGYLQFSGEDIGDPYVKFEVEPSKTHDGLVHIRCCYNNKFWRRSS-PNDYWIWADADDPD 86 (153)
T ss_dssp EEEETTTS-EEEEEESSCTTCCEEEEEESSTT-CCG-EEEEE-SSTTT-EEEEETTTTEEEEESC-CC--BEEEEESSHH
T ss_pred EEEEcCCCcEEEEEecccccceeEEecCCcCCCCceeEEEEEcccCCCeEEEEeccCCceeEeCC-CCCcEEEecCCCcc
Confidence 3555789999999772222 2333444 445999999999 77999999998 999999643 22336888887665
Q ss_pred -----CCce-EEEEEeC-CCCceEEEEec-CCceEEe
Q 009475 142 -----YSET-FQIVRKD-GDSSRVRLSAS-NGMFIQA 170 (534)
Q Consensus 142 -----~~Et-F~ivr~~-~~~~~v~i~~~-nG~~Lq~ 170 (534)
+..| |+-|+-+ ++.+.++++-. ||.|.+-
T Consensus 87 ed~s~~~cTLF~Pv~vd~~~~~~i~l~~~~n~~~~~r 123 (153)
T PF07468_consen 87 EDQSKPSCTLFEPVKVDVKDFNVIALRNMQNGHFCKR 123 (153)
T ss_dssp H-TCSTCGG-EEEEESCCCETTEEEEEETTTTEEEEE
T ss_pred cccCCCCceEEEEEEecCCCccEEEEEecCCceEEEE
Confidence 3666 9987654 33456766664 6777763
|
Lectins occur widely in plants, as well as some microorganisms and animal []. Agglutinin from Amaranthus caudatus (amaranthin) is a lectin from the ancient South American crop, amaranth grain. Although its biological function is unknown, it can agglutinate A, B and O red blood cells, and has a carbohydrate-binding site that is specific for the methyl-glycoside of the T-antigen found linked to serine or threonine residues of cell surface glycoproteins []. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains []. Lectin B chains from ricin and related toxins also contain beta-trefoil domain, however they are not related to agglutinin, showing little sequence similarity [].; PDB: 1JLY_B 1JLX_B. |
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=91.49 E-value=1.4 Score=37.53 Aligned_cols=71 Identities=10% Similarity=0.268 Sum_probs=52.6
Q ss_pred eEEEEEec--CceEEEEee-CCcEEEeecCC--CCceEEEeecCCCCCceEEEEEeCCCCceEEEEec-CCceEEeccc
Q 009475 101 TFRLWRVN--ETFYNFRVN-NKQFIGLENQG--QGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSAS-NGMFIQAISE 173 (534)
Q Consensus 101 tf~~~~~~--~~~~~~~~~-n~~~v~~~~~g--~~~~~~a~~~~~~~~EtF~ivr~~~~~~~v~i~~~-nG~~Lq~~g~ 173 (534)
.|++..+. ++.|.|+.. .|+++.+.+++ .|..|+.-...-.+.+.|+|++..++. ++|... +|..|.+.+.
T Consensus 4 ~W~~~~~~~~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~~~~~g~--y~I~n~~s~~~Ldv~~~ 80 (105)
T PF14200_consen 4 QWTFTPVGDSDGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIEPVGDGY--YRIRNKNSGKVLDVAGG 80 (105)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEEESTTSE--EEEEETSTTEEEEEGGG
T ss_pred EEEEEEecCCCCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEEEecCCe--EEEEECCCCcEEEECCC
Confidence 56777766 899999987 89999998642 233566655555889999999988765 556655 4888888754
|
... |
| >PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate [] | Back alignment and domain information |
|---|
Probab=91.08 E-value=0.54 Score=48.76 Aligned_cols=169 Identities=19% Similarity=0.195 Sum_probs=86.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccc-------c------------CCC------------CCCCC----CCchHHHHHHHH
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIA-------N------------DPT------------PPKPF----VGGSSKVLDNAF 274 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~-------~------------~~~------------~~~~~----~~~~l~~ld~~v 274 (534)
|..++.||=.|+|.+=.+++-..+ . .|. -+.|. .+...+.=++++
T Consensus 22 EreIDWMALnGiNl~La~~GqEavw~~v~~~~G~t~~ei~~ff~GPA~laW~rMgNl~gwgGPLp~~w~~~q~~Lq~kIl 101 (333)
T PF05089_consen 22 EREIDWMALNGINLPLAIVGQEAVWQRVLRELGLTDEEIREFFTGPAFLAWWRMGNLQGWGGPLPQSWIDQQAELQKKIL 101 (333)
T ss_dssp HHHHHHHHHTT--EEE--TTHHHHHHHHHGGGT--HHHHHHHS--TT-HHHHHTTS--STT----TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhhhhhHHHHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHhCCcccCCCCCCHHHHHHHHHHHHHHH
Confidence 889999999999988877752110 0 010 01232 234566667899
Q ss_pred HHHHHCCCEEEEEcCC--C--------CCCC---CCCCCCCCCCCCCCCC----hhhHHHHHHHHHHHHHHhcCCCeEEE
Q 009475 275 DWAEKYGVKVIVDLHA--A--------PGSQ---NGNEHSATRDGFQEWG----DSNVADTVAVIDFLAARYANRPSLAA 337 (534)
Q Consensus 275 ~~a~~~Gl~VIlDlH~--~--------pG~q---ng~~~sg~~~g~~~W~----~~~~~~~~~~w~~lA~ryk~~~~vlg 337 (534)
+..++.||..||=-.. . |+.. -+.+..- ..+.|. +-..+-...+.+...+.|+ ..++.+
T Consensus 102 ~RmreLGm~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~~f---~~~~~L~P~dplF~~i~~~F~~~q~~~yG-~~~~Y~ 177 (333)
T PF05089_consen 102 DRMRELGMTPVLPAFAGHVPRAFKRKYPNANITRQGNWNGF---CRPYFLDPTDPLFAEIAKLFYEEQIKLYG-TDHIYA 177 (333)
T ss_dssp HHHHHHT-EEEEE--S-EE-TTHHHHSTT--EE---EETTE---E--EEE-SS--HHHHHHHHHHHHHHHHH----SEEE
T ss_pred HHHHHcCCcccCCCcCCCCChHHHhcCCCCEEeeCCCcCCC---CCCceeCCCCchHHHHHHHHHHHHHHhcC-CCceeC
Confidence 9999999999984321 0 1110 0000000 001111 2334556678888888898 778999
Q ss_pred EEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC------C-CCCCChhhhhcccCCCceEEEEE
Q 009475 338 IELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN------R-LGPADHKELLSFASGLSRVVIDV 402 (534)
Q Consensus 338 ~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~------~-~~~~~~~~~~~~~~~~~nvv~d~ 402 (534)
.|++||=..+....+.+.+..+.+++++++.+|+.+-++-+ . |.......++.-.+.+.=+|+|.
T Consensus 178 ~D~FnE~~p~~~~~~~l~~~s~~v~~am~~~dp~AvWvmQgWlF~~~~fW~~~~~~a~L~~Vp~~~mliLDL 249 (333)
T PF05089_consen 178 ADPFNEGGPPSGDPEYLANVSKAVYKAMQAADPDAVWVMQGWLFYYDPFWTPNPIKALLSGVPKGRMLILDL 249 (333)
T ss_dssp --TTTTS---TTS---HHHHHHHHHHHHHHH-TT-EEEEEE--------BTTBS-HHHHTT-SGGGEEEEET
T ss_pred CCccCCCCCCCCchHHHHHHHHHHHHHHHhhCCCcEEEEcccccccccccCcchHHHHHcCCCCCCeEEEEc
Confidence 99999977655566779999999999999999997766643 1 32211234443323445566664
|
Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A. |
| >smart00791 Agglutinin Amaranthus caudatus agglutinin or amaranthin is a lectin from the ancient South American crop, amaranth grain | Back alignment and domain information |
|---|
Probab=90.99 E-value=3.6 Score=37.08 Aligned_cols=97 Identities=16% Similarity=0.192 Sum_probs=65.6
Q ss_pred eeEEeeeeceeEEEeecCCCceEE-eccCC-CCCcceEEEEEecCceEEEEee-CCcEEEeecCCCCceEEEeecCC-C-
Q 009475 67 QVQFMSTKFQKYIAAESGGGTIVV-ANRTS-ASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTA-G- 141 (534)
Q Consensus 67 ~~~~~s~~~~~~~~a~~~g~~~~~-anr~~-~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~g~~~~~~a~~~~~-~- 141 (534)
-|.|||- |||||.+...++-+.+ ..-+. ..+--.|++....+|.+.+|+. +|||.... ..=|.|.++.| .
T Consensus 7 ~V~FKg~-n~kYLry~~~~~~~~lqf~~ddI~dp~v~~ev~~~~dg~V~ik~~~~nKfWr~s----~~WI~a~s~d~~e~ 81 (139)
T smart00791 7 YVLFKGN-NQKYLRYQSIQQYGLLQFSADKILDPLVQFEVFPTYNGLVHIKSNYTNKFWRLS----HYWITADANDPDEN 81 (139)
T ss_pred EEEEEcC-CCceEEEEeecccceeEecccccCCcceeEEEEEcCCCcEEEEecCCCceEccC----CCEEEecCCCCccC
Confidence 5899998 9999999875544442 11111 2244467777788999999998 99999886 34688888777 2
Q ss_pred --CCceEEEEEeCCCCceEEEEe-cCCceEEe
Q 009475 142 --YSETFQIVRKDGDSSRVRLSA-SNGMFIQA 170 (534)
Q Consensus 142 --~~EtF~ivr~~~~~~~v~i~~-~nG~~Lq~ 170 (534)
..+-|+-+.-+++ .++++- -||.|+.-
T Consensus 82 ~sscTLF~Pv~~d~~--~i~lr~vq~~~~~~r 111 (139)
T smart00791 82 KSACTLFRPLYVEMK--KIRLLNVQLGHYTKR 111 (139)
T ss_pred CCcccEEeEEeccCc--eEEEEEecCCceEEe
Confidence 3445776664433 465554 36777653
|
Although its biological function is unknown, it has a high binding specificity for the methyl-glycoside of the T-antigen, found linked to serine or threonine residues of cell surface glycoproteins PUBMED:2271665. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains PUBMED:9334739. |
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.84 Score=48.95 Aligned_cols=59 Identities=17% Similarity=0.273 Sum_probs=42.1
Q ss_pred HHHHHHHHhCCccEEEeCccccccc----CCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIAN----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~----~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
++.++.|+++|+++|=||=.+.... .+..-...++ +..+.|+++|+.|+++||+||+|+
T Consensus 32 ~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 32 EGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 5678899999999999975432111 1110000111 578899999999999999999998
|
|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=89.84 E-value=0.79 Score=50.34 Aligned_cols=62 Identities=29% Similarity=0.287 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCccEEEeCccccc-------ccCCCCCC---------CCCC--chHHHHHHHHHHHHHCCCEEEEEc---
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWI-------ANDPTPPK---------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL--- 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~-------~~~~~~~~---------~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl--- 288 (534)
.+-++.|+++|+++|=|+=.+.. ..++.... ..++ |..+.|+++|+.|+++||+||+|+
T Consensus 25 ~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 25 AERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 34589999999999998532211 11111100 1122 578899999999999999999998
Q ss_pred CCC
Q 009475 289 HAA 291 (534)
Q Consensus 289 H~~ 291 (534)
|..
T Consensus 105 H~~ 107 (479)
T PRK09441 105 HKA 107 (479)
T ss_pred ccc
Confidence 654
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.71 E-value=2.3 Score=47.66 Aligned_cols=108 Identities=17% Similarity=0.190 Sum_probs=67.3
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++-++++++.|+|+|-..|.|- .-+|.++ .|+=...-.|.+.|..|++.||+|+|=+--+ -+.-+++ | |.+-
T Consensus 52 ~~~i~k~k~~Gln~IqtYVfWn-~Hep~~g-~y~FsG~~DlvkFikl~~~~GLyv~LRiGPy--IcaEw~~-G---G~P~ 123 (649)
T KOG0496|consen 52 PDLIKKAKAGGLNVIQTYVFWN-LHEPSPG-KYDFSGRYDLVKFIKLIHKAGLYVILRIGPY--ICAEWNF-G---GLPW 123 (649)
T ss_pred HHHHHHHHhcCCceeeeeeecc-cccCCCC-cccccchhHHHHHHHHHHHCCeEEEecCCCe--EEecccC-C---Ccch
Confidence 7889999999999999999864 4456554 4442333446777999999999999865421 1111122 1 2332
Q ss_pred CC------------hhhHHHHHHHHHHHHHH----hc-CCCeEEEEEeccCCC
Q 009475 310 WG------------DSNVADTVAVIDFLAAR----YA-NRPSLAAIELINEPL 345 (534)
Q Consensus 310 W~------------~~~~~~~~~~w~~lA~r----yk-~~~~vlg~eL~NEP~ 345 (534)
|. +....++.++++.|..+ |. +-.-|+..++=||=.
T Consensus 124 wL~~~pg~~~Rt~nepfk~~~~~~~~~iv~~mk~L~~~qGGPIIl~QIENEYG 176 (649)
T KOG0496|consen 124 WLRNVPGIVFRTDNEPFKAEMERWTTKIVPMMKKLFASQGGPIILVQIENEYG 176 (649)
T ss_pred hhhhCCceEEecCChHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEeechhh
Confidence 32 23344555566665553 32 223466689999954
|
|
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Probab=89.61 E-value=0.67 Score=53.22 Aligned_cols=61 Identities=25% Similarity=0.517 Sum_probs=41.4
Q ss_pred HHHHHHHhCCccEEEe-Ccc---------------cccccCCCC---CC-CCCC-chHHHHHHHHHHHHHCCCEEEEEc-
Q 009475 231 EDFKFLSSNGINAVRI-PVG---------------WWIANDPTP---PK-PFVG-GSSKVLDNAFDWAEKYGVKVIVDL- 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~---------------~w~~~~~~~---~~-~~~~-~~l~~ld~~v~~a~~~Gl~VIlDl- 288 (534)
.-++.|+++|+|+|=| ||. +|-. ++.. ++ .|.. +..+.|+++|+.|+++||+||||+
T Consensus 188 ~~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGY-d~~~y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDvV 266 (688)
T TIGR02100 188 AMIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGY-NTLGFFAPEPRYLASGQVAEFKTMVRALHDAGIEVILDVV 266 (688)
T ss_pred chhHHHHHcCCCEEEECCcccCCccccccccCCCCccCc-CcccccccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3589999999999987 552 1111 1110 01 1111 357889999999999999999997
Q ss_pred --CCCC
Q 009475 289 --HAAP 292 (534)
Q Consensus 289 --H~~p 292 (534)
|...
T Consensus 267 ~NHt~~ 272 (688)
T TIGR02100 267 YNHTAE 272 (688)
T ss_pred cCCccC
Confidence 6543
|
This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. |
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=89.61 E-value=0.94 Score=51.84 Aligned_cols=58 Identities=21% Similarity=0.273 Sum_probs=39.5
Q ss_pred HHHHHHHhCCccEEEeCcccccc-------------------cCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIPVGWWIA-------------------NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~w~~-------------------~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|=|+=-+... ..+......++ +..+.|+++|+.|+++||+||+|+
T Consensus 234 ~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 312 (683)
T PRK09505 234 EKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIRILFDV 312 (683)
T ss_pred HhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45889999999999984111110 00000011122 578999999999999999999997
|
|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=89.54 E-value=0.9 Score=50.71 Aligned_cols=58 Identities=21% Similarity=0.305 Sum_probs=39.6
Q ss_pred HHHHHHHhCCccEEEeCccccccc-----CCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIPVGWWIAN-----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~w~~~-----~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|=|+=-+-... ++......++ +..+.|+++|+.|+++||+||+|+
T Consensus 32 ~~Ldyl~~LGv~~i~L~Pi~~~~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~ 96 (539)
T TIGR02456 32 SKLDYLKWLGVDALWLLPFFQSPLRDDGYDVSDYRAILPEFGTIDDFKDFVDEAHARGMRVIIDL 96 (539)
T ss_pred HhHHHHHHCCCCEEEECCCcCCCCCCCCCCcccccccChhhCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 458899999999998842111100 1100011122 568999999999999999999997
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.54 E-value=0.94 Score=50.70 Aligned_cols=57 Identities=19% Similarity=0.360 Sum_probs=39.6
Q ss_pred HHHHHHHhCCccEEEe-Ccccccc-----cCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIA-----NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~-----~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=| |+. ..- .++..-...++ +..+.|+++|+.|+++||+||+|+
T Consensus 37 ~~ldyl~~lGv~~i~l~P~~-~~~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~ 101 (551)
T PRK10933 37 QRLDYLQKLGVDAIWLTPFY-VSPQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDM 101 (551)
T ss_pred HhhHHHHhCCCCEEEECCCC-CCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5689999999999988 331 100 00100001111 568899999999999999999998
|
|
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=89.15 E-value=0.85 Score=52.07 Aligned_cols=61 Identities=26% Similarity=0.505 Sum_probs=41.3
Q ss_pred HHHHHHHhCCccEEEe-Ccc---------------cccccCCC---CCC-CCCC---chHHHHHHHHHHHHHCCCEEEEE
Q 009475 231 EDFKFLSSNGINAVRI-PVG---------------WWIANDPT---PPK-PFVG---GSSKVLDNAFDWAEKYGVKVIVD 287 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~---------------~w~~~~~~---~~~-~~~~---~~l~~ld~~v~~a~~~Gl~VIlD 287 (534)
.-++.|+++|+|+|=| ||. +|-. ++. .++ .|.. ..++.|+++|+.|.++||+||||
T Consensus 183 ~~LdYLk~LGvt~I~L~Pv~~~~~~~~~~~~g~~~ywGY-d~~~yfa~d~~ygt~~~~~~~efk~LV~~~H~~GI~VIlD 261 (658)
T PRK03705 183 VMIAYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGY-NPLAMFALDPAYASGPETALDEFRDAVKALHKAGIEVILD 261 (658)
T ss_pred cchHHHHHcCCCEEEecCcccCCCcccccccccccccCc-ccccccccccccCCCCcchHHHHHHHHHHHHHCCCEEEEE
Confidence 3589999999999987 552 1211 110 001 1211 23678999999999999999999
Q ss_pred c---CCCC
Q 009475 288 L---HAAP 292 (534)
Q Consensus 288 l---H~~p 292 (534)
+ |...
T Consensus 262 vV~NHt~~ 269 (658)
T PRK03705 262 VVFNHSAE 269 (658)
T ss_pred EcccCccC
Confidence 7 6654
|
|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=88.92 E-value=1.1 Score=49.94 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=40.3
Q ss_pred HHHHHHHHhCCccEEEeCcccccccC-----CCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIAND-----PTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~-----~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+-++.|+++|+++|=|+=-+..... +.....+++ +..+.|+++|+.|+++||+||+|+
T Consensus 30 ~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~ 95 (543)
T TIGR02403 30 IEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDM 95 (543)
T ss_pred HHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35688999999999988322211100 000001112 578999999999999999999997
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >PF00167 FGF: Fibroblast growth factor; InterPro: IPR002348 The interleukin-1 (IL1) and heparin-binding growth factor (HBGF) families share low sequence similarity (about 25% []) but have very similar structures | Back alignment and domain information |
|---|
Probab=88.39 E-value=9.4 Score=33.61 Aligned_cols=96 Identities=14% Similarity=0.163 Sum_probs=67.4
Q ss_pred eEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEee-CCcEEEeecCCCCceEEEeecCCCCCceE
Q 009475 68 VQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAGYSETF 146 (534)
Q Consensus 68 ~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~g~~~~~~a~~~~~~~~EtF 146 (534)
+||=+-+ |+||.-...| .|-+.++.-+....|.+..++.+.+.||.. .+.|+|.+.. +.|.+. ..+.+-..|
T Consensus 3 ~~Ly~~~-~~~L~i~~~g--~V~gt~~~~~~~s~~~i~~~~~g~V~i~~~~s~~YLcmn~~---G~ly~~-~~~~~~C~F 75 (122)
T PF00167_consen 3 VQLYCRT-GYFLQINPNG--TVDGTGDDNSPYSVFEIHSVGFGVVRIRGVKSCRYLCMNKC---GRLYGS-KNFNKDCVF 75 (122)
T ss_dssp EEEEETT-SEEEEEETTS--BEEEESSTTSTTGEEEEEEEETTEEEEEETTTTEEEEEBTT---SBEEEE-SSBTGGGEE
T ss_pred EEEEECC-CeEEEECCCC--eEeCCCCcCcceeEEEEEeccceEEEEEEecceEEEEECCC---CeEccc-cccCCCceE
Confidence 5665544 9999887655 677778777889999999999999999999 8999999963 357775 455567788
Q ss_pred EEEEeCCCCceEEEEec--CCceEEec
Q 009475 147 QIVRKDGDSSRVRLSAS--NGMFIQAI 171 (534)
Q Consensus 147 ~ivr~~~~~~~v~i~~~--nG~~Lq~~ 171 (534)
+-.-..+.- .+-.... .+.||-.+
T Consensus 76 ~e~~~~n~y-~~~~s~~~~~~~yla~~ 101 (122)
T PF00167_consen 76 REELLENGY-NTYESAKYGRGWYLAFN 101 (122)
T ss_dssp EEEEETTSE-EEEEESTTGTTEBCEBC
T ss_pred EEEEccCCE-EEEEeccCCccEEEEEC
Confidence 744333332 2333332 46666544
|
Coupled with the Kunitz-type soybean trypsin inhibitors (STI), they form a structural superfamily. Despite their structural correspondence, however, they show no sequence similarity to the STI family. The crystal structures of interleukin-1 beta and HBGF1 have been solved, showing both families to have the same 12-stranded beta-sheet structure []; the beta-sheets are arranged in 3 similar lobes around a central axis, 6 strands forming an anti-parallel beta-barrel [, ]. The beta-sheets are generally well preserved and the crystal structures superimpose in these areas. The intervening loops are less well conserved - the loop between beta-strands 6 and 7 is slightly longer in interleukin-1 beta.; GO: 0008083 growth factor activity; PDB: 1AFC_F 1BAR_A 2P39_A 1EV2_D 2BFH_A 4FGF_A 1BAS_A 1BFG_A 1FQ9_B 1CVS_A .... |
| >KOG3962 consensus Predicted actin-bundling protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=87.89 E-value=0.64 Score=45.10 Aligned_cols=75 Identities=20% Similarity=0.311 Sum_probs=59.3
Q ss_pred ccccceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCC
Q 009475 62 LLDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAG 141 (534)
Q Consensus 62 ~~~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~ 141 (534)
++| .+|+||| -.|+||+-++-| .||+--.++|+=|+|..+..+ +.++|-++|++|..++.. +-.-+|.++.-.
T Consensus 91 i~d-srIaLKs-GyGKYlsinsdg--lvvg~qeAvG~~EQw~~vFq~-~r~a~~as~s~~~~~~e~--~d~~va~kt~t~ 163 (246)
T KOG3962|consen 91 ISD-SRIALKS-GYGKYLSINSDG--LVVGRQEAVGSREQWEPVFQE-GRMALLASNSCFIRCNEA--GDAEVASKTATE 163 (246)
T ss_pred ccC-ceEEecc-cccceeeecCCc--cEEEehhhcCcHhhchhhhhc-cceEEeeccceeEEechh--hchhhhcccCCC
Confidence 345 8999998 599999999876 789999999999999887765 667777789999999754 334677776554
Q ss_pred CC
Q 009475 142 YS 143 (534)
Q Consensus 142 ~~ 143 (534)
++
T Consensus 164 ~~ 165 (246)
T KOG3962|consen 164 EP 165 (246)
T ss_pred Cc
Confidence 43
|
|
| >KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.97 E-value=0.86 Score=51.45 Aligned_cols=59 Identities=20% Similarity=0.326 Sum_probs=41.9
Q ss_pred CCHHHHHHHHhCCccEEEe-Ccccc-------c-----ccCCCCCCCC----CCchHHHHHHHHHHHHHCCCEEEEEc
Q 009475 228 ITDEDFKFLSSNGINAVRI-PVGWW-------I-----ANDPTPPKPF----VGGSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 228 ite~d~~~ia~~G~N~VRI-Pv~~w-------~-----~~~~~~~~~~----~~~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+||+++.+||.+|+|+|-| |+.-. . ++-| ...| .+.....++++|+.|.+.||-||||+
T Consensus 256 FteKvlphlK~LG~NaiqLmpi~Ef~~~~~s~GY~~~nFFap--ssrYgt~~s~~ri~efK~lVd~aHs~GI~VlLDV 331 (757)
T KOG0470|consen 256 FTEKVLPHLKKLGYNAIQLMPIFEFGHYYASWGYQVTNFFAP--SSRYGTPESPCRINEFKELVDKAHSLGIEVLLDV 331 (757)
T ss_pred hhhhhhhHHHHhCccceEEeehhhhhhhhhccCcceeEeecc--cccccCCCcccchHHHHHHHHHHhhCCcEEehhh
Confidence 4688899999999999997 44211 0 0111 0111 12347789999999999999999997
|
|
| >cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=86.51 E-value=23 Score=36.42 Aligned_cols=137 Identities=17% Similarity=0.200 Sum_probs=76.7
Q ss_pred HHHHHHHHhCCccEEEeCcc----cccccC--CC---CCC---CCCC-c--hHHHHHHHHHHHHHCCCEEEEEcCC----
Q 009475 230 DEDFKFLSSNGINAVRIPVG----WWIAND--PT---PPK---PFVG-G--SSKVLDNAFDWAEKYGVKVIVDLHA---- 290 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~----~w~~~~--~~---~~~---~~~~-~--~l~~ld~~v~~a~~~Gl~VIlDlH~---- 290 (534)
++.++.|+..++|.+-+.+. |..-.. |. .+. ++.. + ..+.++++++.|+++||.||..+-.
T Consensus 19 k~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~yT~~di~elv~yA~~rgI~viPEiD~PGH~ 98 (303)
T cd02742 19 KRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFYTYAQLKDIIEYAAARGIEVIPEIDMPGHS 98 (303)
T ss_pred HHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeECHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 45677789999999998775 321111 10 000 0111 1 5788999999999999999987632
Q ss_pred ------CCCCC-CCCCCCCCCCCCCCC--C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHH
Q 009475 291 ------APGSQ-NGNEHSATRDGFQEW--G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKA 360 (534)
Q Consensus 291 ------~pG~q-ng~~~sg~~~g~~~W--~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~ 360 (534)
.|.-. .....+........- . +...+-..++++.+++-|...---+|-| |........+.+..|.++
T Consensus 99 ~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~lf~~~~iHiGgD---E~~~~~~~~~l~~~f~~~ 175 (303)
T cd02742 99 TAFVKSFPKLLTECYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAELFPDRYLHIGGD---EAHFKQDRKHLMSQFIQR 175 (303)
T ss_pred HHHHHhCHHhccCccccCCCCCCCCccCCCCccHHHHHHHHHHHHHHhCCCCeEEecce---ecCCCCCHHHHHHHHHHH
Confidence 12100 000000000000001 1 4556667788888888885433224433 322111234567788899
Q ss_pred HHHHHHhcC
Q 009475 361 GYDAVRKYT 369 (534)
Q Consensus 361 ~~~aIR~~~ 369 (534)
+.+.|++.+
T Consensus 176 ~~~~v~~~g 184 (303)
T cd02742 176 VLDIVKKKG 184 (303)
T ss_pred HHHHHHHcC
Confidence 999999886
|
These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself. |
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=86.11 E-value=3.6 Score=47.89 Aligned_cols=62 Identities=24% Similarity=0.224 Sum_probs=43.6
Q ss_pred HHHHHHHHhCCccEEEeCccccccc----CCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIAN----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAA 291 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~----~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~ 291 (534)
.+.++.|+++|+++|=||=.+-... ++..-...++ +..+.|+++|+.|+++||+||+|+ |..
T Consensus 524 ~ekldyL~~LG~taIWLpP~~~s~s~~GY~p~D~y~lds~yGT~~ELk~LI~a~H~~GIkVIlDiViNH~a 594 (894)
T PLN02784 524 GEKAAELSSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDAVLNHRC 594 (894)
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 5678999999999999975432111 1110000111 578899999999999999999997 654
|
|
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=85.96 E-value=1.5 Score=53.49 Aligned_cols=64 Identities=22% Similarity=0.414 Sum_probs=43.3
Q ss_pred HHHHHHHHhCCccEEEe-Ccccccc--------------cCCCC---CC-CCCCchHHHHHHHHHHHHHCCCEEEEEc--
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWWIA--------------NDPTP---PK-PFVGGSSKVLDNAFDWAEKYGVKVIVDL-- 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w~~--------------~~~~~---~~-~~~~~~l~~ld~~v~~a~~~Gl~VIlDl-- 288 (534)
++.++.|+++|+|+|=| ||.-..- .++.. ++ .|..+..+.|+++|+.|+++||+||||+
T Consensus 190 ~~~i~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~yWGY~~~~yfa~dp~yg~~~~~efk~lV~~~H~~GI~VILDvV~ 269 (1221)
T PRK14510 190 PEAISYLKKLGVSIVELNPIFASVDEHHLPQLGLSNYWGYNTVAFLAPDPRLAPGGEEEFAQAIKEAQSAGIAVILDVVF 269 (1221)
T ss_pred chhHHHHHHcCCCEEEeCCccccCcccccccccCcCcCCCCCCCCCCcChhhccCcHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 46788999999999987 5532100 01100 01 1211267899999999999999999997
Q ss_pred -CCCCC
Q 009475 289 -HAAPG 293 (534)
Q Consensus 289 -H~~pG 293 (534)
|...+
T Consensus 270 NHt~~~ 275 (1221)
T PRK14510 270 NHTGES 275 (1221)
T ss_pred ccccCC
Confidence 66544
|
|
| >PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins | Back alignment and domain information |
|---|
Probab=84.85 E-value=4.8 Score=36.76 Aligned_cols=64 Identities=19% Similarity=0.321 Sum_probs=45.5
Q ss_pred cCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCceEEEEEeCCCCceEEEEecCCceEEeccc
Q 009475 108 NETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISE 173 (534)
Q Consensus 108 ~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~EtF~ivr~~~~~~~v~i~~~nG~~Lq~~g~ 173 (534)
+...+.||+..++|+.||..|.+..+--++.+...-=+=++|. ++...|++++-.|.||-++..
T Consensus 6 d~~~VRLRS~~~kYL~ADeDg~~Vs~~~~~~s~na~W~Ve~v~--~~~~~v~L~saYGrYL~as~~ 69 (142)
T PF04601_consen 6 DGKHVRLRSHHGKYLHADEDGEGVSQDRRGASLNAAWTVERVP--GSPNYVRLRSAYGRYLAASDE 69 (142)
T ss_pred CCCEEEEEecCCCEEEEcCCCCeEEECCCCCCCcceEEEEEec--CCCCEEEEeeccCceEeccCC
Confidence 5677899999999999997755555555555444333334554 335689999999999988743
|
Some family members contain two copies of the region. |
| >PRK07379 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=84.61 E-value=9.1 Score=41.04 Aligned_cols=122 Identities=20% Similarity=0.203 Sum_probs=77.2
Q ss_pred CCHHHHHHHHhCCccEEEeCcccccccCCCCCCCC-CCchHHHHHHHHHHHHHCCCE-EEEEcC-CCCCCCCCCCCCCCC
Q 009475 228 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSATR 304 (534)
Q Consensus 228 ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gl~-VIlDlH-~~pG~qng~~~sg~~ 304 (534)
+|++.++.+++.|+|.|=|.| ..+.+.. -... .....+.+.++++.+++.|+. |-+||- +.||
T Consensus 113 lt~e~l~~l~~~GvnrislGv--QS~~d~~-L~~l~R~~~~~~~~~ai~~l~~~G~~~v~~dlI~GlPg----------- 178 (400)
T PRK07379 113 FDLEQLQGYRSLGVNRVSLGV--QAFQDEL-LALCGRSHRVKDIFAAVDLIHQAGIENFSLDLISGLPH----------- 178 (400)
T ss_pred CCHHHHHHHHHCCCCEEEEEc--ccCCHHH-HHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC-----------
Confidence 689999999999999666554 2221110 0001 113567788899999999998 778975 4453
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCceE
Q 009475 305 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 305 ~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~~ 373 (534)
...+.+.+-++.+.+ + +-..|-.+.|.-||..+ -.+.+...+.++.+.+.+++.+-.++
T Consensus 179 --------qt~e~~~~tl~~~~~-l-~p~~is~y~L~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~Gy~~y 248 (400)
T PRK07379 179 --------QTLEDWQASLEAAIA-L-NPTHLSCYDLVLEPGTAFGKQYQPGKAPLPSDETTAAMYRLAQEILTQAGYEHY 248 (400)
T ss_pred --------CCHHHHHHHHHHHHc-C-CCCEEEEecceecCCchhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHcCCcee
Confidence 123344444444433 2 23466667788888742 12345667788889999998876654
|
|
| >PRK05628 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=83.56 E-value=13 Score=39.27 Aligned_cols=123 Identities=20% Similarity=0.111 Sum_probs=76.8
Q ss_pred CCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCC-CchHHHHHHHHHHHHHCCCE-EEEEcC-CCCCCCCCCCCCCC
Q 009475 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 303 (534)
Q Consensus 227 ~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~-~~~l~~ld~~v~~a~~~Gl~-VIlDlH-~~pG~qng~~~sg~ 303 (534)
.++++.++.++++|+|.|-|.+.- +.+. --..+. ....+.+.++++.+++.|+. |.+|+- +.||
T Consensus 105 ~i~~e~l~~l~~~G~~rvslGvQS--~~~~-~L~~l~R~~s~~~~~~a~~~l~~~g~~~v~~dli~GlPg---------- 171 (375)
T PRK05628 105 STSPEFFAALRAAGFTRVSLGMQS--AAPH-VLAVLDRTHTPGRAVAAAREARAAGFEHVNLDLIYGTPG---------- 171 (375)
T ss_pred CCCHHHHHHHHHcCCCEEEEeccc--CCHH-HHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEEEeccCCC----------
Confidence 378999999999999988877642 2111 000111 13567788999999999998 889974 4453
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCce
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
.+.+.+.+.++.+.+ ++ -..+..|.+.=||..+ ..+.+.....++.+.+.+++.+-.+
T Consensus 172 ---------qt~~~~~~tl~~~~~-l~-~~~i~~y~l~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 240 (375)
T PRK05628 172 ---------ESDDDWRASLDAALE-AG-VDHVSAYALIVEDGTALARRVRRGELPAPDDDVLADRYELADARLSAAGFDW 240 (375)
T ss_pred ---------CCHHHHHHHHHHHHh-cC-CCEEEeeeeecCCCChHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHcCCCe
Confidence 223445555554443 22 2345456666677642 1234556778888888888876554
Q ss_pred E
Q 009475 373 Y 373 (534)
Q Consensus 373 ~ 373 (534)
+
T Consensus 241 y 241 (375)
T PRK05628 241 Y 241 (375)
T ss_pred e
Confidence 3
|
|
| >TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase | Back alignment and domain information |
|---|
Probab=83.55 E-value=3.3 Score=48.21 Aligned_cols=59 Identities=20% Similarity=0.233 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCccEEEe-Ccccc-----cccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWW-----IANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w-----~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+.+..|+++|+++|=| |+.-- ...+.......++ +..+.|+++++.|+++||+||+|+
T Consensus 19 ~~~L~YL~~LGv~~V~lsPi~~a~~gs~hGYdv~D~~~idp~lGt~edf~~Lv~aah~~Gm~vIlDi 85 (825)
T TIGR02401 19 AALLPYLKSLGVSHLYLSPILTAVPGSTHGYDVVDHSEINPELGGEEGLRRLSEAARARGLGLIVDI 85 (825)
T ss_pred HHhhHHHHHcCCCEEEeCcCccCCCCCCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 56788999999999977 33100 0001111111122 578999999999999999999997
|
This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis. |
| >PRK08208 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=83.27 E-value=11 Score=40.68 Aligned_cols=122 Identities=22% Similarity=0.289 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCC-CCchHHHHHHHHHHHHHCCCEEE-EEcC-CCCCCCCCCCCCCC
Q 009475 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVKVI-VDLH-AAPGSQNGNEHSAT 303 (534)
Q Consensus 227 ~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gl~VI-lDlH-~~pG~qng~~~sg~ 303 (534)
.+|++.++.++++|+|.|-|.|.- +.+.. -..+ .....+.+.++++.++++|+.+| +|+- +.|+
T Consensus 138 ~lt~e~l~~l~~~G~~rvslGvQS--~~~~~-L~~l~R~~~~~~~~~ai~~l~~~g~~~i~~dlI~GlP~---------- 204 (430)
T PRK08208 138 TTTAEKLALLAARGVNRLSIGVQS--FHDSE-LHALHRPQKRADVHQALEWIRAAGFPILNIDLIYGIPG---------- 204 (430)
T ss_pred cCCHHHHHHHHHcCCCEEEEeccc--CCHHH-HHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC----------
Confidence 378999999999999977776632 21110 0001 11256788899999999999854 7863 4443
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-----CCChHHHHHHHHHHHHHHHhcCCce
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----GVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-----~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
.+.+.+.+.++.+.+ .+ -+.+-.+.|.=||... ..+.+...++++.+.+...+.+=.+
T Consensus 205 ---------qt~e~~~~~l~~~~~-l~-~~~is~y~L~~~~~T~l~~~~~~~~~~~~~m~~~~~~~L~~~Gy~~ 267 (430)
T PRK08208 205 ---------QTHASWMESLDQALV-YR-PEELFLYPLYVRPLTGLGRRARAWDDQRLSLYRLARDLLLEAGYTQ 267 (430)
T ss_pred ---------CCHHHHHHHHHHHHh-CC-CCEEEEccccccCCCccchhcCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 223444455554443 22 2355556677777642 1133666778888888888876544
|
|
| >PRK05799 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=83.24 E-value=14 Score=39.04 Aligned_cols=123 Identities=19% Similarity=0.219 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCC-CchHHHHHHHHHHHHHCCCE-EEEEcC-CCCCCCCCCCCCCC
Q 009475 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 303 (534)
Q Consensus 227 ~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~-~~~l~~ld~~v~~a~~~Gl~-VIlDlH-~~pG~qng~~~sg~ 303 (534)
.+|++.++.+++.|+|.|-|.+ ..+.+..- .... ....+.+.++++.++++|+. |-+|+- +.||
T Consensus 96 ~~t~e~l~~l~~~G~~rvsiGv--qS~~d~~L-~~l~R~~~~~~~~~ai~~l~~~g~~~v~~dli~GlPg---------- 162 (374)
T PRK05799 96 TFTEEKLKILKSMGVNRLSIGL--QAWQNSLL-KYLGRIHTFEEFLENYKLARKLGFNNINVDLMFGLPN---------- 162 (374)
T ss_pred cCCHHHHHHHHHcCCCEEEEEC--ccCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC----------
Confidence 4789999999999999666655 22211100 0011 12577788999999999996 668864 3343
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCce
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
.+.+.+.+.++.+.+. + -+.|-.|.+.-+|..+ ..+.+.....++.+.+.+.+.+-.+
T Consensus 163 ---------qt~e~~~~~l~~~~~l-~-~~~is~y~l~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~Gy~~ 231 (374)
T PRK05799 163 ---------QTLEDWKETLEKVVEL-N-PEHISCYSLIIEEGTPFYNLYENGKLKLPDEEEEREMYHYTIEFLKEKGYHQ 231 (374)
T ss_pred ---------CCHHHHHHHHHHHHhc-C-CCEEEEeccEecCCCHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCcE
Confidence 2345566666666542 2 2345456666677642 1234556677888888888877554
Q ss_pred E
Q 009475 373 Y 373 (534)
Q Consensus 373 ~ 373 (534)
+
T Consensus 232 y 232 (374)
T PRK05799 232 Y 232 (374)
T ss_pred E
Confidence 3
|
|
| >PRK05904 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=83.23 E-value=15 Score=38.74 Aligned_cols=125 Identities=16% Similarity=0.152 Sum_probs=76.9
Q ss_pred CCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCC-CchHHHHHHHHHHHHHCCCE-EEEEcC-CCCCCCCCCCCCCC
Q 009475 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 303 (534)
Q Consensus 227 ~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~-~~~l~~ld~~v~~a~~~Gl~-VIlDlH-~~pG~qng~~~sg~ 303 (534)
-++++.++.+++.|+|.|=|++- .+.+..- ..+. ....+.+.++++.++++|+. |-+|+- +.||
T Consensus 100 ~lt~e~l~~lk~~G~nrisiGvQ--S~~d~vL-~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dlI~GlPg---------- 166 (353)
T PRK05904 100 LITQSQINLLKKNKVNRISLGVQ--SMNNNIL-KQLNRTHTIQDSKEAINLLHKNGIYNISCDFLYCLPI---------- 166 (353)
T ss_pred cCCHHHHHHHHHcCCCEEEEecc--cCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCcEEEEEeecCCC----------
Confidence 46899999999999997777663 2211100 0011 13567888999999999987 888864 4453
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC------CCChHHHHHHHHHHHHHHHhcCCceEEE
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------GVALDTLKSYYKAGYDAVRKYTSTAYVI 375 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~------~~~~~~~~~~~~~~~~aIR~~~p~~~Ii 375 (534)
.+.+.+.+.++.+.+ .+ -+.+-.+.|.=||..+ ..+.+.-.+.++.+.+.+++.+-.++=+
T Consensus 167 ---------qt~e~~~~tl~~~~~-l~-p~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~yei 233 (353)
T PRK05904 167 ---------LKLKDLDEVFNFILK-HK-INHISFYSLEIKEGSILKKYHYTIDEDKEAEQLNYIKAKFNKLNYKRYEV 233 (353)
T ss_pred ---------CCHHHHHHHHHHHHh-cC-CCEEEEEeeEecCCChHhhcCCCCChHHHHHHHHHHHHHHHHcCCcEEec
Confidence 223445555554443 22 1244445555566531 1344556677888888888888776533
|
|
| >cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins | Back alignment and domain information |
|---|
Probab=82.25 E-value=25 Score=36.59 Aligned_cols=137 Identities=16% Similarity=0.193 Sum_probs=76.5
Q ss_pred HHHHHHHHhCCccEEEeCccc-cccc-C--CCCC-----------------CCCC-Cc--hHHHHHHHHHHHHHCCCEEE
Q 009475 230 DEDFKFLSSNGINAVRIPVGW-WIAN-D--PTPP-----------------KPFV-GG--SSKVLDNAFDWAEKYGVKVI 285 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~-w~~~-~--~~~~-----------------~~~~-~~--~l~~ld~~v~~a~~~Gl~VI 285 (534)
++.++.|+..++|.+-+.+.- |.+. + |... .... .+ ..+.++++|+.|+++||.||
T Consensus 20 k~~id~ma~~K~N~lhlHltD~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 20 KDIIKTMSWYKMNDLQLHLNDNLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred HHHHHHHHHcCCceEEEeecCCcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 566777899999999986641 1111 1 1000 0000 11 57889999999999999999
Q ss_pred EEcCCCCCCC-----------CCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcC-CCeE-EEEEeccCCCCCCCCh
Q 009475 286 VDLHAAPGSQ-----------NGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYAN-RPSL-AAIELINEPLAPGVAL 351 (534)
Q Consensus 286 lDlH~~pG~q-----------ng~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~-~~~v-lg~eL~NEP~~~~~~~ 351 (534)
..+-. ||.. -....+....+.-... +...+-..++++.+++.|.. .+.+ +|-| |........
T Consensus 100 PEID~-PGH~~a~~~~~pel~~~~~~~~~~~~~l~~~~~~t~~f~~~l~~E~~~~f~~~~~~~HiGgD---E~~~~~~~~ 175 (326)
T cd06564 100 PEIDS-PGHSLAFTKAMPELGLKNPFSKYDKDTLDISNPEAVKFVKALFDEYLDGFNPKSDTVHIGAD---EYAGDAGYA 175 (326)
T ss_pred ccCCC-cHHHHHHHHhhHHhcCCCcccCCCcccccCCCHHHHHHHHHHHHHHHHhcCCCCCEEEeccc---cccccCccH
Confidence 76532 2210 0000000000000111 45555666788888888873 2322 3322 222112345
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 009475 352 DTLKSYYKAGYDAVRKYTS 370 (534)
Q Consensus 352 ~~~~~~~~~~~~aIR~~~p 370 (534)
+.+..|.+++.+.|++.+-
T Consensus 176 ~~~~~f~~~~~~~v~~~gk 194 (326)
T cd06564 176 EAFRAYVNDLAKYVKDKGK 194 (326)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 6788999999999999753
|
Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=82.25 E-value=5.2 Score=42.07 Aligned_cols=135 Identities=16% Similarity=0.139 Sum_probs=75.7
Q ss_pred CHHHHHHHHhCCccEEEeCcccc---cccCCCCCCCCC----CchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPVGWW---IANDPTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 301 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~~w---~~~~~~~~~~~~----~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s 301 (534)
.++-++.++++|+.-|=|---.. .+-+ ....+|. +...+.+.++++.|+++||++-+=+|...-. +.....
T Consensus 93 ~dqW~~~ak~aGakY~VlTakHHDGF~LW~-S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~dw~-~~~~~~ 170 (346)
T PF01120_consen 93 ADQWAKLAKDAGAKYVVLTAKHHDGFCLWP-SKYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPWDWH-HPDYPP 170 (346)
T ss_dssp HHHHHHHHHHTT-SEEEEEEE-TT--BSS---TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESSSCC-CTTTTS
T ss_pred HHHHHHHHHHcCCCEEEeehhhcCccccCC-CCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecchHhc-CcccCC
Confidence 45566778899999987643211 0111 1111232 2357899999999999999999977754211 110000
Q ss_pred CCCC---C----CCCCChhh-HHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceE
Q 009475 302 ATRD---G----FQEWGDSN-VADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 302 g~~~---g----~~~W~~~~-~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ 373 (534)
.... + ...| +.. .+....-++.|.++| .+.++=||...... .+.+.. .+.++.||+..|+.+
T Consensus 171 ~~~~~~~~~~~~~~~~-~~~~~~~~~~ql~EL~~~Y--~~d~lWfDg~~~~~-----~~~~~~--~~~~~~i~~~qp~~i 240 (346)
T PF01120_consen 171 DEEGDENGPADGPGNW-QRYYNEYWLAQLRELLTRY--KPDILWFDGGWPDP-----DEDWDS--AELYNWIRKLQPDVI 240 (346)
T ss_dssp SCHCHHCC--HCCHHH-HHHHHHHHHHHHHHHHHCS--TESEEEEESTTSCC-----CTHHHH--HHHHHHHHHHSTTSE
T ss_pred CccCCcccccccchhh-HhHhhhhhHHHHHHHHhCC--CcceEEecCCCCcc-----ccccCH--HHHHHHHHHhCCeEE
Confidence 0000 0 0000 112 225566777888899 66777799877642 122322 888999999999765
Q ss_pred EE
Q 009475 374 VI 375 (534)
Q Consensus 374 Ii 375 (534)
|.
T Consensus 241 i~ 242 (346)
T PF01120_consen 241 IN 242 (346)
T ss_dssp EE
T ss_pred Ee
Confidence 43
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >PRK05660 HemN family oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=82.21 E-value=15 Score=39.09 Aligned_cols=123 Identities=18% Similarity=0.192 Sum_probs=74.3
Q ss_pred CCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCC-CCchHHHHHHHHHHHHHCCCEE-EEEcC-CCCCCCCCCCCCCC
Q 009475 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVKV-IVDLH-AAPGSQNGNEHSAT 303 (534)
Q Consensus 227 ~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gl~V-IlDlH-~~pG~qng~~~sg~ 303 (534)
-++++.++.++++|+|.|=|-| ..+.+.. -... .....+...++++.+++.|+.. -+|+- +.||
T Consensus 104 ~l~~e~l~~Lk~~Gv~risiGv--qS~~~~~-L~~l~r~~~~~~~~~ai~~~~~~G~~~v~~dli~Glpg---------- 170 (378)
T PRK05660 104 TVEADRFVGYQRAGVNRISIGV--QSFSEEK-LKRLGRIHGPDEAKRAAKLAQGLGLRSFNLDLMHGLPD---------- 170 (378)
T ss_pred cCCHHHHHHHHHcCCCEEEecc--CcCCHHH-HHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC----------
Confidence 4689999999999999555544 2221110 0000 1136778888999999999975 48875 3332
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-------CCChHHHHHHHHHHHHHHHhcCCceE
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~~~ 373 (534)
.+.+.+.+.++.+.+ ++ -+.|-.+.|.=||..+ -.+.+.....|+.+.+...+.+-.++
T Consensus 171 ---------qt~~~~~~~l~~~~~-l~-p~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~y 236 (378)
T PRK05660 171 ---------QSLEEALDDLRQAIA-LN-PPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQY 236 (378)
T ss_pred ---------CCHHHHHHHHHHHHh-cC-CCeEEeeccEeccCCcccccCCCCcCHHHHHHHHHHHHHHHHHcCCcEe
Confidence 234455555555544 22 2345556666666531 12334556788888888888776554
|
|
| >PRK14511 maltooligosyl trehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=81.96 E-value=4.1 Score=47.72 Aligned_cols=59 Identities=14% Similarity=0.133 Sum_probs=40.5
Q ss_pred HHHHHHHHhCCccEEEeCccccc------ccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWI------ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~------~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+.+..|+++|+++|=++=-+-. ..+.......++ +..+.|+++++.|+++||+||+|+
T Consensus 23 ~~~l~YL~~LGis~IyLsPi~~a~~gs~hGYdv~D~~~idp~lGt~e~f~~Lv~aah~~Gi~VIlDi 89 (879)
T PRK14511 23 AELVPYFADLGVSHLYLSPILAARPGSTHGYDVVDHTRINPELGGEEGLRRLAAALRAHGMGLILDI 89 (879)
T ss_pred HHHhHHHHHcCCCEEEECcCccCCCCCCCCCCcCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 56788999999999987321110 001111111122 567999999999999999999998
|
|
| >COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.70 E-value=2.6 Score=45.93 Aligned_cols=58 Identities=26% Similarity=0.351 Sum_probs=40.4
Q ss_pred HHHHHHHhCCccEEEe-Ccccc----cccCCCCCCCCC--CchHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWW----IANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w----~~~~~~~~~~~~--~~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+++|=| |+..- ...+.......+ -+..+.++++++.|+++||+||+|+
T Consensus 33 ~~LdYl~~LGv~aiwl~Pi~~s~~~~~gY~~~Dy~~id~~~Gt~~d~~~li~~~H~~gi~vi~D~ 97 (505)
T COG0366 33 EKLDYLKELGVDAIWLSPIFESPQADHGYDVSDYTKVDPHFGTEEDFKELVEEAHKRGIKVILDL 97 (505)
T ss_pred HhhhHHHHhCCCEEEeCCCCCCCccCCCccccchhhcCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 6789999999999976 33221 000111111111 2689999999999999999999998
|
|
| >PRK06294 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=81.31 E-value=20 Score=38.07 Aligned_cols=123 Identities=19% Similarity=0.202 Sum_probs=77.2
Q ss_pred CCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCC-CchHHHHHHHHHHHHHCCCE-EEEEcC-CCCCCCCCCCCCCC
Q 009475 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 303 (534)
Q Consensus 227 ~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~-~~~l~~ld~~v~~a~~~Gl~-VIlDlH-~~pG~qng~~~sg~ 303 (534)
.++++.++.+++.|+|.|-|.|. .+.+.. -..+. ....+.+.++++.+++.|+. |-+||- +.||
T Consensus 100 ~~~~~~l~~l~~~G~nrislGvQ--S~~~~~-L~~l~R~~~~~~~~~ai~~~~~~g~~~v~~Dli~GlPg---------- 166 (370)
T PRK06294 100 NLSESYIRALALTGINRISIGVQ--TFDDPL-LKLLGRTHSSSKAIDAVQECSEHGFSNLSIDLIYGLPT---------- 166 (370)
T ss_pred CCCHHHHHHHHHCCCCEEEEccc--cCCHHH-HHHcCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC----------
Confidence 36899999999999997766553 221110 00011 12467788899999999996 888864 3342
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCce
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
...+.+.+.++.+.+ ++ -+.|-.|.|.=||..+ -.+.+.....++.+.+.+.+.+-.+
T Consensus 167 ---------qt~~~~~~~l~~~~~-l~-~~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 235 (370)
T PRK06294 167 ---------QSLSDFIVDLHQAIT-LP-ITHISLYNLTIDPHTSFYKHRKRLLPSIADEEILAEMSLAAEELLTSQGFTR 235 (370)
T ss_pred ---------CCHHHHHHHHHHHHc-cC-CCeEEEeeeEecCCChHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCe
Confidence 223445555555443 22 2456667888888631 1234566788888888888877655
Q ss_pred E
Q 009475 373 Y 373 (534)
Q Consensus 373 ~ 373 (534)
+
T Consensus 236 y 236 (370)
T PRK06294 236 Y 236 (370)
T ss_pred e
Confidence 4
|
|
| >cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins | Back alignment and domain information |
|---|
Probab=81.24 E-value=53 Score=33.79 Aligned_cols=144 Identities=10% Similarity=0.042 Sum_probs=79.8
Q ss_pred HHHHHHHHhCCccEEEeCccc-ccc-cCCCC---CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC----CC
Q 009475 230 DEDFKFLSSNGINAVRIPVGW-WIA-NDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN----EH 300 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~-w~~-~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~----~~ 300 (534)
++.++.|+..|+|.+-+-+.- ..+ ..|.- ...| ..+.++++++.|+++||.||..+-. ||..... ..
T Consensus 20 k~~id~ma~~k~N~l~lhl~D~f~~~~~p~~~~~~~~y---T~~ei~ei~~yA~~~gI~vIPeid~-pGH~~~~l~~~~~ 95 (301)
T cd06565 20 KKLLRLLALLGANGLLLYYEDTFPYEGEPEVGRMRGAY---TKEEIREIDDYAAELGIEVIPLIQT-LGHLEFILKHPEF 95 (301)
T ss_pred HHHHHHHHHcCCCEEEEEEecceecCCCcccccCCCCc---CHHHHHHHHHHHHHcCCEEEecCCC-HHHHHHHHhCccc
Confidence 567788999999999986531 000 01100 1122 5788999999999999999987643 2210000 00
Q ss_pred CCCCC-CCCCCC-----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC-C-------CCCChHHHHHHHHHHHHHHH
Q 009475 301 SATRD-GFQEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPL-A-------PGVALDTLKSYYKAGYDAVR 366 (534)
Q Consensus 301 sg~~~-g~~~W~-----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~-~-------~~~~~~~~~~~~~~~~~aIR 366 (534)
...++ ..+... +...+-..++++++++-|...---+|-|=..+.. . .....+.+..+.+++.+.|+
T Consensus 96 ~~l~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f~s~~~HIG~DE~~~~g~~~~~~~~~~~~~~~l~~~~~~~v~~~v~ 175 (301)
T cd06565 96 RHLREVDDPPQTLCPGEPKTYDFIEEMIRQVLELHPSKYIHIGMDEAYDLGRGRSLRKHGNLGRGELYLEHLKKVLKIIK 175 (301)
T ss_pred ccccccCCCCCccCCCChhHHHHHHHHHHHHHHhCCCCeEEECCCcccccCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 00000 000000 4555666678888888776422223333222211 1 01123567789999999999
Q ss_pred hcCCceEEEEeC
Q 009475 367 KYTSTAYVIMSN 378 (534)
Q Consensus 367 ~~~p~~~Iiv~~ 378 (534)
+.++ .+++=++
T Consensus 176 ~~g~-~~~~W~D 186 (301)
T cd06565 176 KRGP-KPMMWDD 186 (301)
T ss_pred HcCC-EEEEEhH
Confidence 9987 3444343
|
GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PRK13347 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=80.93 E-value=15 Score=40.03 Aligned_cols=122 Identities=16% Similarity=0.127 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCC-CchHHHHHHHHHHHHHCCCE-EEEEcC-CCCCCCCCCCCCCC
Q 009475 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 303 (534)
Q Consensus 227 ~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~-~~~l~~ld~~v~~a~~~Gl~-VIlDlH-~~pG~qng~~~sg~ 303 (534)
.+|++.++.+++.|+|.|=|.|. .+. +.--..+. ....+.+.++++.+++.|+. |-+|+- +.||
T Consensus 149 ~lt~e~l~~L~~~G~~rvsiGvQ--S~~-~~vl~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dli~GlPg---------- 215 (453)
T PRK13347 149 TVTAEMLQALAALGFNRASFGVQ--DFD-PQVQKAINRIQPEEMVARAVELLRAAGFESINFDLIYGLPH---------- 215 (453)
T ss_pred cCCHHHHHHHHHcCCCEEEECCC--CCC-HHHHHHhCCCCCHHHHHHHHHHHHhcCCCcEEEeEEEeCCC----------
Confidence 47899999999999996666552 221 10000111 13677889999999999996 778863 4443
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC----------CCChHHHHHHHHHHHHHHHhcCCce
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------GVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
.+.+.+.+.++.+.+ ++ -..|-.|.+...|... -.+.+...+.++.+.+.+.+.+=.+
T Consensus 216 ---------qt~e~~~~tl~~~~~-l~-p~~i~~y~l~~~p~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~ 283 (453)
T PRK13347 216 ---------QTVESFRETLDKVIA-LS-PDRIAVFGYAHVPSRRKNQRLIDEAALPDAEERLRQARAVADRLLAAGYVP 283 (453)
T ss_pred ---------CCHHHHHHHHHHHHh-cC-CCEEEEeccccccchhhHHhcCCccCCcCHHHHHHHHHHHHHHHHHCCCEE
Confidence 234556666666554 22 1234445555555421 1234566778888888888877544
|
|
| >PRK08599 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=80.69 E-value=18 Score=38.36 Aligned_cols=122 Identities=22% Similarity=0.219 Sum_probs=75.3
Q ss_pred CCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCC-CCchHHHHHHHHHHHHHCCCE-EEEEcC-CCCCCCCCCCCCCC
Q 009475 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 303 (534)
Q Consensus 227 ~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gl~-VIlDlH-~~pG~qng~~~sg~ 303 (534)
.++++.++.+++.|+|.|=|.+.- + ++.--..+ .....+.+.++++.++++|+. |-+|+- +.||
T Consensus 97 ~l~~e~l~~l~~~G~~rvsiGvqS--~-~~~~l~~l~r~~~~~~~~~~i~~l~~~g~~~v~~dli~GlPg---------- 163 (377)
T PRK08599 97 DLTKEKLQVLKDSGVNRISLGVQT--F-NDELLKKIGRTHNEEDVYEAIANAKKAGFDNISIDLIYALPG---------- 163 (377)
T ss_pred CCCHHHHHHHHHcCCCEEEEeccc--C-CHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEeeecCCCC----------
Confidence 468999999999999977776632 2 11000001 123577888999999999987 567764 4443
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCce
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
.+.+.+.+.++.+.+ ++ -+.+..+.|.-||..+ ..+.+...+.++.+.+.+++.+=.+
T Consensus 164 ---------qt~~~~~~~l~~~~~-l~-~~~i~~y~l~~~pgT~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~Gy~~ 232 (377)
T PRK08599 164 ---------QTIEDFKESLAKALA-LD-IPHYSAYSLILEPKTVFYNLMRKGKLRLPGEDLEAEMYEYLMDEMEAHGFHQ 232 (377)
T ss_pred ---------CCHHHHHHHHHHHHc-cC-CCEEeeeceeecCCChhHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCcE
Confidence 223444444544433 22 2345556677777632 0234555678888888888877544
|
|
| >PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=80.16 E-value=1.9 Score=44.67 Aligned_cols=28 Identities=32% Similarity=0.457 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHHHCCCEEEEEcCCCCC
Q 009475 266 SSKVLDNAFDWAEKYGVKVIVDLHAAPG 293 (534)
Q Consensus 266 ~l~~ld~~v~~a~~~Gl~VIlDlH~~pG 293 (534)
..++.|++.+-|++.|+++|..|-+..|
T Consensus 107 t~~rwd~l~~F~~~tG~~liFgLNAL~g 134 (319)
T PF03662_consen 107 TMSRWDELNNFAQKTGLKLIFGLNALLG 134 (319)
T ss_dssp -----HHHHHHHHHHT-EEEEEE-TTTS
T ss_pred chhHHHHHHHHHHHhCCEEEEEecccCC
Confidence 4678999999999999999999998754
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A. |
| >COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=80.03 E-value=24 Score=38.16 Aligned_cols=122 Identities=22% Similarity=0.230 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCC-CCchHHHHHHHHHHHHHCCCE-EEEEc-CCCCCCCCCCCCCCC
Q 009475 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDL-HAAPGSQNGNEHSAT 303 (534)
Q Consensus 227 ~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gl~-VIlDl-H~~pG~qng~~~sg~ 303 (534)
.++.+-|+.+++.|+| ||-++-+.+-+..- ... .....+....+++.+++.|+. |-+|| ++.|+
T Consensus 134 ~~~~e~~~~l~~~GvN--RiSlGVQsf~~~~l-k~lgR~h~~~~~~~a~~~~~~~g~~~in~DLIyglP~---------- 200 (416)
T COG0635 134 TVEAEKFKALKEAGVN--RISLGVQSFNDEVL-KALGRIHDEEEAKEAVELARKAGFTSINIDLIYGLPG---------- 200 (416)
T ss_pred CCCHHHHHHHHHcCCC--EEEeccccCCHHHH-HHhcCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC----------
Confidence 4678999999999999 99887654422100 000 012456678899999999887 77897 45553
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC----------CCChHHHHHHHHHHHHHHHhcCCce
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------GVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
.+.+.+.+-.+.+.+ ++ -+.|-.|.|.-||... -.+.+.-.+.++.+.+.+.+.+=.+
T Consensus 201 ---------QT~~~~~~~l~~a~~-l~-pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~~~Gy~~ 268 (416)
T COG0635 201 ---------QTLESLKEDLEQALE-LG-PDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLEKAGYRQ 268 (416)
T ss_pred ---------CCHHHHHHHHHHHHh-CC-CCEEEEeeeecCCCchhhhhcccCCCCcChHHHHHHHHHHHHHHHHCCCcE
Confidence 223444444444443 22 4467789999999862 1234556678889999998887643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 534 | ||||
| 1eqp_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans Length | 3e-37 | ||
| 1cz1_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 | 4e-37 | ||
| 2pc8_A | 400 | E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida | 5e-37 | ||
| 2pbo_A | 400 | E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida A | 5e-37 | ||
| 2pb1_A | 400 | Exo-b-(1,3)-glucanase From Candida Albicans In Comp | 5e-37 | ||
| 3n9k_A | 399 | F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 6e-37 | ||
| 3o6a_A | 399 | F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 1e-36 | ||
| 2pf0_A | 400 | F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida | 3e-36 | ||
| 1h4p_A | 408 | Crystal Structure Of Exo-1,3-Beta Glucanse From Sac | 1e-32 | ||
| 1cec_A | 343 | A Common Protein Fold And Similar Active Site In Tw | 6e-12 | ||
| 1cen_A | 343 | Cellulase (Celc) Mutant With Glu 140 Replaced By Gl | 2e-11 | ||
| 3mmu_A | 317 | Crystal Structure Of Endoglucanase Cel5a From The H | 1e-08 | ||
| 3azr_A | 317 | Diverse Substrates Recognition Mechanism Revealed B | 1e-08 | ||
| 3amg_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 7e-08 | ||
| 3aof_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 7e-08 | ||
| 1vjz_A | 341 | Crystal Structure Of Endoglucanase (Tm1752) From Th | 7e-06 |
| >pdb|1EQP|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans Length = 394 | Back alignment and structure |
|
| >pdb|1CZ1|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution Length = 394 | Back alignment and structure |
|
| >pdb|2PC8|A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A Length = 400 | Back alignment and structure |
|
| >pdb|2PBO|A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Length = 400 | Back alignment and structure |
|
| >pdb|2PB1|A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|3N9K|A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A Length = 399 | Back alignment and structure |
|
| >pdb|3O6A|A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A Length = 399 | Back alignment and structure |
|
| >pdb|2PF0|A Chain A, F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|1H4P|A Chain A, Crystal Structure Of Exo-1,3-Beta Glucanse From Saccharomyces Cerevisiae Length = 408 | Back alignment and structure |
|
| >pdb|1CEC|A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases Length = 343 | Back alignment and structure |
|
| >pdb|1CEN|A Chain A, Cellulase (Celc) Mutant With Glu 140 Replaced By Gln Complexed With Cellohexaose Length = 343 | Back alignment and structure |
|
| >pdb|3MMU|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The Hyperthermophilic Thermotoga Maritima Length = 317 | Back alignment and structure |
|
| >pdb|3AZR|A Chain A, Diverse Substrates Recognition Mechanism Revealed By Thermotoga Maritima Cel5a Structures In Complex With Cellobiose Length = 317 | Back alignment and structure |
|
| >pdb|3AMG|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Cellobiose Substrate, Mutant Form Length = 317 | Back alignment and structure |
|
| >pdb|3AOF|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Mannotriose Substrate Length = 317 | Back alignment and structure |
|
| >pdb|1VJZ|A Chain A, Crystal Structure Of Endoglucanase (Tm1752) From Thermotoga Maritima At 2.05 A Resolution Length = 341 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 534 | |||
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 3e-71 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 4e-05 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 8e-68 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 2e-05 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 5e-62 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 3e-54 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 5e-47 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 2e-39 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 2e-27 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 5e-27 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 4e-26 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 4e-25 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 2e-24 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 8e-23 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 9e-23 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 2e-22 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 4e-22 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 2e-20 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 1e-19 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 3e-19 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 4e-19 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 4e-19 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 2e-05 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 6e-19 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 5e-18 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 8e-18 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 4e-17 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 1e-16 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 1e-16 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 6e-16 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 6e-06 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 2e-15 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 3e-15 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 1e-14 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 4e-13 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 7e-11 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 2e-09 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 5e-07 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 3e-05 | |
| 3q7x_A | 132 | De novo designed beta-trefoil architecture with S | 9e-05 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 2e-04 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 4e-04 |
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Length = 399 | Back alignment and structure |
|---|
Score = 232 bits (592), Expect = 3e-71
Identities = 103/345 (29%), Positives = 161/345 (46%), Gaps = 28/345 (8%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 50 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 108
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 323
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 109 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 168
Query: 324 FLAARYANRP---SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 380
+ +Y + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 169 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAA 228
Query: 381 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 439
+ L+ A G VV+D H+Y +FS N+ +I N +
Sbjct: 229 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDA----KKES 284
Query: 440 GPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEW------------NVKDASK 487
G + C + + N + G + D K
Sbjct: 285 HW-NVAGSWSAALTDCAK----WLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHK 339
Query: 488 QDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 531
D +R+ AQLD + T GW +W+ K E A WS + + NG
Sbjct: 340 TDTRRYIEAQLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNGLF 383
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Length = 399 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 4e-05
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 31 KLPLRAVNLGNWLVTEGWMKPSRFDDIPNKDLLDG 65
+R VNLG W V E +M PS F+ N + G
Sbjct: 11 NNVIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSG 45
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Length = 408 | Back alignment and structure |
|---|
Score = 223 bits (569), Expect = 8e-68
Identities = 90/352 (25%), Positives = 147/352 (41%), Gaps = 33/352 (9%)
Query: 203 GEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF 262
EY G D A LQ HW ++ ++DF ++S G N VRIP+G+W
Sbjct: 49 DEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYV 108
Query: 263 VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 322
G LD A WA +KV VDLH A GSQNG ++S RD ++ DSN+A T+ V+
Sbjct: 109 SGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVL 168
Query: 323 DFLAARYANRPS---LAAIELINEPLAPGVALDT-LKSYYKAGYDAVRKYTSTAYVIMSN 378
+++ +Y+ + IELINEPL P + +D Y Y+ +R + VI+ +
Sbjct: 169 NYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIH 228
Query: 379 RL--GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 436
+ ++ G V ID H+Y +F+++ ++ ++I
Sbjct: 229 DAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGV----- 283
Query: 437 TSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEW---------------- 480
+ G+ + C + + + G W
Sbjct: 284 LNESHWIVCGEFAAALTDCIK----WLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIA 339
Query: 481 NVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 531
D K++ +R+ AQLD + GW W +K E + W + ++ NG
Sbjct: 340 YWSDERKENTRRYVEAQLDAF-EMRGGWIIWCYKTESSLEWDAQRLMFNGLF 390
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Length = 408 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 2e-05
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 26 QNADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPNKDLLD 64
+ + P+R VN+G WL+ E ++ PS F+ D D
Sbjct: 5 DHGSLGEPIRGVNIGGWLLLEPYITPSLFEAFRTNDDND 43
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Length = 343 | Back alignment and structure |
|---|
Score = 206 bits (525), Expect = 5e-62
Identities = 59/330 (17%), Positives = 115/330 (34%), Gaps = 27/330 (8%)
Query: 214 DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNA 273
+ ++H+D++IT++D + ++ G + VR+P + I + +D
Sbjct: 15 SQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRC 74
Query: 274 FDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP 333
+W +KY + +++D+H APG + + ++T + V + FLA RY N
Sbjct: 75 LEWCKKYNLGLVLDMHHAPGYRFQDFKTSTLF----EDPNQQKRFVDIWRFLAKRYINER 130
Query: 334 SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS--NRLGPADHKELLSF 391
A EL+N+ + P A+R+ ST ++ + N P + K L
Sbjct: 131 EHIAFELLNQVVEPDS--TRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLADI 188
Query: 392 ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTS 451
+V + H+YN F + ++ N S
Sbjct: 189 DDD--YIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMM 246
Query: 452 ALICKRCTQIRIRKRNLWLN----------FVGEWTCEWNVKDASKQDYQRFANAQLDVY 501
L + + +RK + GE+ + A + ++ + +
Sbjct: 247 ELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGV---IAIADLESRIKWHEDYISLL 303
Query: 502 GRATFGWAYWAHKCEA----NHWSLKWMIE 527
G A W +K N E
Sbjct: 304 EEYDIGGAVWNYKKMDFEIYNEDRKPVSQE 333
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Length = 341 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 3e-54
Identities = 55/309 (17%), Positives = 105/309 (33%), Gaps = 24/309 (7%)
Query: 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEK 279
+EDF +++ N VRIP+ + +D P + +D W EK
Sbjct: 29 FSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEK 88
Query: 280 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPS-LAAI 338
YG+ + + LH APG E + +++ ++ + F+A RY S +
Sbjct: 89 YGIHICISLHRAPGYSVNKEVEEKTNLWKD--ETAQEAFIHHWSFIARRYKGISSTHLSF 146
Query: 339 ELINEPLAPG---VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 395
LINEP P ++++ S K +RK +I+ + + +
Sbjct: 147 NLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIII----DGLGYGNIPVDDLTI 202
Query: 396 SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALIC 455
V Y FS + D+ + + N L+
Sbjct: 203 ENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWN----------REKLLE 252
Query: 456 KRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 515
T I++R++ + + F GE ++ L+++ G+A W +
Sbjct: 253 HYLTWIKLRQKGIEV-FCGEMGA---YNKTPHDVVLKWLEDLLEIFKTLNIGFALWNFRG 308
Query: 516 EANHWSLKW 524
+
Sbjct: 309 PFGILDSER 317
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Length = 317 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 5e-47
Identities = 52/306 (16%), Positives = 96/306 (31%), Gaps = 36/306 (11%)
Query: 223 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 282
W I DE F + G + VRIP+ W PP + K +D + A K G+
Sbjct: 29 DWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGL 88
Query: 283 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 342
V++++H N E R +A+ +A RY + P E++N
Sbjct: 89 AVVINIHHYEELMNDPEEHKER-------------FLALWKQIADRYKDYPETLFFEILN 135
Query: 343 EPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM-SNRLGPADHKELLSFASGLSRVVID 401
P + + +R +I+ + G E LS ++
Sbjct: 136 APHGNLTP-EKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVT 194
Query: 402 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQI 461
+HYYN F G + + ++ F+ + +
Sbjct: 195 IHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKK-------NKR 247
Query: 462 RIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE---AN 518
I ++GE+ A + ++ + + + + AYW +
Sbjct: 248 PI--------YIGEFGAYRK---ADLESRIKWTSFVVREMEKRRWSLAYWEFCSGFGVYD 296
Query: 519 HWSLKW 524
W
Sbjct: 297 TLRKTW 302
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Length = 320 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 2e-39
Identities = 59/343 (17%), Positives = 100/343 (29%), Gaps = 40/343 (11%)
Query: 189 DPSVFKLNIVSTLRGEYQITNGF---GPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 245
D SV ++ S I +G +AP + W YI DE FK + G ++VR
Sbjct: 2 DQSVSNVDKSSAFEYNKMIGHGINMGNALEAPV--EGSWGVYIEDEYFKIIKERGFDSVR 59
Query: 246 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 305
IP+ W P + + D A K + VI++ H
Sbjct: 60 IPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFE------------- 106
Query: 306 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAV 365
+ D V + +A + + P E+ NEP Y +
Sbjct: 107 ELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQNLTP-TKWNELYPKVLGEI 165
Query: 366 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVN 425
RK + VI+ +++ HYY F+ G +
Sbjct: 166 RKTNPSRIVIIDVPNWSNYSYVRELKLVDDKNIIVSFHYYEPFNFTHQGAEWVSPTLPIG 225
Query: 426 NQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDA 485
+ V +V + + I F+GE+ A
Sbjct: 226 VKWEGKDWEVEQIRNHFKYVSEWAKK-------NNVPI--------FLGEFGAYSK---A 267
Query: 486 SKQDYQRFANAQLDVYGRATFGWAYWAHKCE---ANHWSLKWM 525
+ ++ + F AYW + W+ W+
Sbjct: 268 DMESRVKWTKTVRRIAEEFGFSLAYWEFCAGFGLYDRWTKTWI 310
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Length = 376 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 53/333 (15%), Positives = 97/333 (29%), Gaps = 54/333 (16%)
Query: 196 NIVSTLRGEYQITNGFGPDKAPQVLQDHWDS-YITDEDFKFLSSNGINAVRIPVGWWIAN 254
N+ +T+ + + D+ + W + T++ FK L N N RIP W
Sbjct: 32 NLGNTMDAQCIEYLNYEKDQTAS--ETCWGNPKTTEDMFKVLIDNQFNVFRIPTTWSGHF 89
Query: 255 DPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN 314
P K + D+ K G VI++LH H F E D+
Sbjct: 90 GEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLH----------HETWNHAFSETLDTA 139
Query: 315 VADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLKSYYKAGYDA 364
+ +A + + E +NEP D + +
Sbjct: 140 KEILEKIWSQIAEEFKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAMNAVFLKT 199
Query: 365 VRKY---TSTAYVIMSNRLGPADHKELLSFASGL--SRVVIDVHYYNLFSNNFNGLNVQQ 419
VR ++++ + +F +V+ VH Y + NF N +
Sbjct: 200 VRSAGGNNPKRHLMIPPYAAACNENSFNNFIFPEDDDKVIASVHAYAPY--NFALNNGEG 257
Query: 420 NIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCE 479
+D + DL I + + + L GE+
Sbjct: 258 AVDKFDAAGKRDL------------------EWNINLMKKRFVDQGIPMIL---GEYGAM 296
Query: 480 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWA 512
+ + + F ++ G +W
Sbjct: 297 NRDNEEDRATWAEFYMEKVTAMG---VPQIWWD 326
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Length = 395 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 5e-27
Identities = 51/320 (15%), Positives = 90/320 (28%), Gaps = 44/320 (13%)
Query: 227 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV 286
+T E K + + G ++RIPV + P + D+A G+ VI+
Sbjct: 69 TVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVII 128
Query: 287 DLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346
++H + + V +A +++N E +NE
Sbjct: 129 NIHGDGYNSVQGGWL---LVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESMNEVFD 185
Query: 347 PG------VALDTLKSYYKAGYDAVRK----------------YTSTAYVIMSNRLGPAD 384
L +Y + D VR+ V P D
Sbjct: 186 GNYGNPNSAYYTNLNAYNQIFVDTVRQTGGNNNARWLLVPGWNTNIDYTVGNYGFTLPTD 245
Query: 385 HKELLSFASGLSRVVIDVHYYN--LFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPL 442
+ + S R++I HYY+ F+ NG Q N + S G
Sbjct: 246 NYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAKKSTWGQEDYLESQF 305
Query: 443 TFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQR--FANAQLDV 500
+ + + + +GE+ S + R +A A
Sbjct: 306 KSMYD--------------KFVTQGYPV-VIGEFGSIDKTSYDSSNNVYRAAYAKAVTAK 350
Query: 501 YGRATFGWAYWAHKCEANHW 520
+ YW + H
Sbjct: 351 AKKYKMVPVYWDNGHNGQHG 370
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Length = 305 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 4e-25
Identities = 41/313 (13%), Positives = 89/313 (28%), Gaps = 65/313 (20%)
Query: 211 FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVL 270
FG P V + + L S G+N R+P + L
Sbjct: 16 FGSQNLPGVEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADL 74
Query: 271 DNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDF---LAA 327
+ + G +VD H + + +S ++ F +A+
Sbjct: 75 IATVNAITQKGAYAVVDPHN----------------YGRYYNSIISSPSDFETFWKTVAS 118
Query: 328 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM-------SNRL 380
++A+ P + + NE + + +A D +R +T+ I
Sbjct: 119 QFASNPLV-IFDTDNEYHDMDQT--LVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWT 175
Query: 381 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG 440
+ + S +++ ++H Y ++ +G + + +R + +NG
Sbjct: 176 WTNVNDNMKSLTDPSDKIIYEMHQY--LDSDGSGTSATCVSSTIGQERITSATQWLRANG 233
Query: 441 PLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASK-QDYQRFANAQLD 499
+GE+ + + + D
Sbjct: 234 KKG----------------------------IIGEFAGGADNVCETAITGMLDYMAQNTD 265
Query: 500 VYGRATFGWAYWA 512
V+ G +WA
Sbjct: 266 VW----TGAIWWA 274
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Length = 358 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 56/348 (16%), Positives = 104/348 (29%), Gaps = 84/348 (24%)
Query: 200 TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP 259
+ G N FG + V+ W + S G N +R+P I T P
Sbjct: 22 RIAG----INWFGFETCNYVVHGLWSRDY-RSMLDQIKSLGYNTIRLPYSDDILKPGTMP 76
Query: 260 KPFVGGSS----------KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309
+V+D +A + G+++I+D H S
Sbjct: 77 NSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSA----------L 126
Query: 310 WGDS--NVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDT-----LKSYYKAGY 362
W S + A ++ + LA RY P++ +L NEP P + +
Sbjct: 127 WYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAG 186
Query: 363 DAVRKYTSTAYVIM--------------SNRLGPADHKELLSFASGLSRVVIDVHYYNLF 408
+AV + + N G + +L+ +R+V H Y
Sbjct: 187 NAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVP---NRLVYSAHDYATS 243
Query: 409 SNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG-PLTFVGKSVTSALICKRCTQIRIRKRN 467
+ + + + G + N P+
Sbjct: 244 VYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPV------------------------- 278
Query: 468 LWLNFVGEWTCEWNVKDASKQDYQRFANAQLDV---YGRATFGWAYWA 512
++GE+ ++ + Q + + L YG +F W +W+
Sbjct: 279 ----WLGEFG--TTLQSTTDQTWLKTLVQYLRPTAQYGADSFQWTFWS 320
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Length = 327 | Back alignment and structure |
|---|
Score = 98.4 bits (245), Expect = 8e-23
Identities = 43/293 (14%), Positives = 83/293 (28%), Gaps = 68/293 (23%)
Query: 223 HWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 281
+ Y+ + K+L + GI R + P + A + A++ G
Sbjct: 64 WYGEYVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVK-----NKVKEAVEAAKELG 118
Query: 282 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 341
+ VI+D H + N +++ Y N P++ E+
Sbjct: 119 IYVIIDWHILNDGNP---------------NQNKEKAKEFFKEMSSLYGNTPNV-IYEIA 162
Query: 342 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 401
NEP +K Y + +RK +I+ D + + V+
Sbjct: 163 NEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVNDAADDQLKDANVMYA 222
Query: 402 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQI 461
+H+Y +G ++ +Y ++ A P+
Sbjct: 223 LHFY----AGTHGQFLRDKANYALSKGA-----------PI------------------- 248
Query: 462 RIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 514
FV EW + + + + L T W W
Sbjct: 249 ----------FVTEWG--TSDASGNGGVFLDQSREWLKYLDSKTISWVNWNLS 289
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Length = 345 | Back alignment and structure |
|---|
Score = 98.5 bits (245), Expect = 9e-23
Identities = 45/326 (13%), Positives = 87/326 (26%), Gaps = 57/326 (17%)
Query: 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 281
+ + T + G N +R+PV W P K ++ ++A
Sbjct: 37 NWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND 96
Query: 282 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 341
+ VI++LH + A V +A + E +
Sbjct: 97 MYVIINLHHENEWLKPFYAN---------EAQVKAQLTKVWTQIANNFKKYGDHLIFETM 147
Query: 342 NEPLAPGV----------ALDTLKSYYKAGYDAVRK---YTSTAYVIMSNRLGPADHKEL 388
NEP G + + Y +A+R +T Y+++ A +
Sbjct: 148 NEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTI 207
Query: 389 LSFASGL--SRVVIDVHYYNLFSNNFNGLNVQQ-NIDYVNNQRASDLGAVTTSNGPLTFV 445
S+V++ +H Y+ + + DY + S+ AV FV
Sbjct: 208 NDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSLDSEFDAVYN-----KFV 262
Query: 446 GKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRAT 505
+ +GE A++ + + G
Sbjct: 263 KN------------GRAV--------VIGEMGSINKNNTAARVTHAEYYAKSAKARG--- 299
Query: 506 FGWAYWAHKCEANHWSLKWMIENGYI 531
+W + G
Sbjct: 300 LTPIWWD----NGYSVAGKAETFGIF 321
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Length = 306 | Back alignment and structure |
|---|
Score = 97.2 bits (242), Expect = 2e-22
Identities = 48/304 (15%), Positives = 95/304 (31%), Gaps = 67/304 (22%)
Query: 222 DHWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKY 280
+D +TD L+ + + +R+ + T P+ G + + D A
Sbjct: 37 QWFDHCLTDSSLDALAYDWKADIIRLSMYIQEDGYETNPR----GFTDRMHQLIDMATAR 92
Query: 281 GVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIEL 340
G+ VIVD H N+ +A R+A++ ++ E+
Sbjct: 93 GLYVIVDWHILTPGDPH---------------YNLDRAKTFFAEIAQRHASKTNV-LYEI 136
Query: 341 INEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI-MSNRLGPADHKELLSFASGLSRVV 399
NEP GV+ ++KSY + +R+ + +I + E A + V
Sbjct: 137 ANEPN--GVSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPV 194
Query: 400 IDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCT 459
+ F +F + + N + + P+
Sbjct: 195 NASNIMYAF--HFYAASHRDNYLNALREASELF--------PV----------------- 227
Query: 460 QIRIRKRNLWLNFVGEW-TCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEAN 518
FV E+ T + A+ A+ +D+ GW W + +
Sbjct: 228 ------------FVTEFGTETYTGDGANDFQM---ADRYIDLMAERKIGWTKWNYSDDFR 272
Query: 519 HWSL 522
++
Sbjct: 273 SGAV 276
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Length = 340 | Back alignment and structure |
|---|
Score = 96.6 bits (240), Expect = 4e-22
Identities = 50/330 (15%), Positives = 100/330 (30%), Gaps = 62/330 (18%)
Query: 196 NIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIAND 255
+ T G +T+ P + + F++ +G+ R+PVGW +
Sbjct: 14 DFGCTTDGTC-VTSKVYPP-LKNFTGSNNYPDGIGQMQHFVNEDGMTIFRLPVGWQYLVN 71
Query: 256 PTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNV 315
S D G IVD+H NG G
Sbjct: 72 NNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNY-ARWNGGIIG--------QGGPTN 122
Query: 316 ADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 375
A ++ LA++YA++ + ++NEP V ++T + + A+R +T+ I
Sbjct: 123 AQFTSLWSQLASKYASQSRV-WFGIMNEPH--DVNINTWAATVQEVVTAIRNAGATSQFI 179
Query: 376 M-------SNRLGPADH-----KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDY 423
S +D ++ + + ++ DVH Y ++ +G + + +
Sbjct: 180 SLPGNDWQSAGAFISDGSAAALSQVTNPDGSTTNLIFDVHKY--LDSDNSGTHAECTTNN 237
Query: 424 VNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEW-TCEWNV 482
++ + + +N + E
Sbjct: 238 IDGAFSPLATWLRQNNRQA-----------------------------ILTETGGGNVQS 268
Query: 483 KDASKQDYQRFANAQLDVYGRATFGWAYWA 512
++ N DVY G+ W
Sbjct: 269 CIQDMCQQIQYLNQNSDVY----LGYVGWG 294
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Length = 303 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 2e-20
Identities = 45/293 (15%), Positives = 83/293 (28%), Gaps = 69/293 (23%)
Query: 224 WDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 282
+ ++ E K+L + GIN R + P + + A + A +
Sbjct: 40 YGQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVK-----EKVKEAVEAAIDLDI 94
Query: 283 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 342
VI+D H + + + D ++ Y + P++ E+ N
Sbjct: 95 YVIIDWHILSDNDP---------------NIYKEEAKDFFDEMSELYGDYPNV-IYEIAN 138
Query: 343 EPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 401
EP V + +K Y + +R +I+ D V+
Sbjct: 139 EPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYA 198
Query: 402 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQI 461
H+Y +G N++ +DY +Q A +
Sbjct: 199 FHFY----AGTHGQNLRDQVDYALDQGA-----------AI------------------- 224
Query: 462 RIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 514
FV EW + + A +D WA W+
Sbjct: 225 ----------FVSEWG--TSAATGDGGVFLDEAQVWIDFMDERNLSWANWSLT 265
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Length = 380 | Back alignment and structure |
|---|
Score = 90.2 bits (223), Expect = 1e-19
Identities = 48/331 (14%), Positives = 94/331 (28%), Gaps = 57/331 (17%)
Query: 208 TNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW--WIANDPTPPKPFVGG 265
NG T + + G N VRIPV W ++
Sbjct: 42 FNGTNITNELDYETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISD---V 98
Query: 266 SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFL 325
+ ++ + VI++ H G S+ S+ +V +
Sbjct: 99 WMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYM------ASSKKYITSVWAQI 152
Query: 326 AARYANRPSLAAIELINEPLAPGV---------------ALDTLKSYYKAGYDAVRKY-- 368
AAR+AN E +NEP G +++ + + + VR
Sbjct: 153 AARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGG 212
Query: 369 TSTAYVIM-------SNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI 421
+ + +M + + + +++++ VH Y + NF GL +
Sbjct: 213 KNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPW--NFAGLAMADG- 269
Query: 422 DYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWN 481
T + +S + + + R + + GE
Sbjct: 270 -------------GTNAWNINDSKDQSEVTWFMDNIYNKYTSRGIPVII---GECGAVDK 313
Query: 482 VKDASKQDYQRFANAQLDVYGRATFGWAYWA 512
++ +Y + AQ G W
Sbjct: 314 NNLKTRVEYMSYYVAQAKARG---ILCILWD 341
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Length = 458 | Back alignment and structure |
|---|
Score = 89.5 bits (221), Expect = 3e-19
Identities = 54/374 (14%), Positives = 108/374 (28%), Gaps = 32/374 (8%)
Query: 160 LSASNGMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQIT--NGFGPDKAP 217
L+ G + +E ++ +++ +N+ S + N FG +
Sbjct: 16 LAGLFGQVVPVYAENTTYQTPTGIYYEVRGDTIYMINVTSGEETPIHLFGVNWFGFETPN 75
Query: 218 QVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK-------PFVGGSS--K 268
V+ W ++ + S G NA+R+P T P P + G +
Sbjct: 76 HVVHGLWKRNW-EDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQ 134
Query: 269 VLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAAR 328
+++ A G+ V++D H + + D + D + +A R
Sbjct: 135 IMEKIIKKAGDLGIFVLLDYHRIGCTHI--------EPLWYTEDFSEEDFINTWIEVAKR 186
Query: 329 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS--TAYVIMSNRLGPADHK 386
+ ++ +L NEP + A + T A + +
Sbjct: 187 FGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVAPH 246
Query: 387 ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 446
L+ Y N + G N+ DY N + L GP +
Sbjct: 247 WLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVYSPHVFGPDVYNQ 306
Query: 447 KSVTSALICKRCTQIRIRKRNLWLN-------FVGEWTCEWNVKDASKQDYQRFANAQLD 499
A ++ +GE+ ++ + N +D
Sbjct: 307 PYFGPAKGFPDNLPDIWYHHFGYVKLELGYSVVIGEFGGKYG--HGGDPRDVIWQNKLVD 364
Query: 500 VYGRAT-FGWAYWA 512
+ YW+
Sbjct: 365 WMIENKFCDFFYWS 378
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Length = 302 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 4e-19
Identities = 25/213 (11%), Positives = 60/213 (28%), Gaps = 31/213 (14%)
Query: 223 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 282
H + F + S+G N VR+ + + P + N ++ +
Sbjct: 28 HNWYPQHTQAFADIKSHGANTVRVVLSNGVRWSKNGPS--------DVANVISLCKQNRL 79
Query: 283 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 342
++++H G + S W + L + I + N
Sbjct: 80 ICMLEVHDTTGYGEQSGASTLDQAVDYWIE------------LKSVLQGEEDYVLINIGN 127
Query: 343 EPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVI-------MSNRLGPADHKELLSFASG 394
EP + + A +R ++ ++ + + +
Sbjct: 128 EPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDP 187
Query: 395 LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQ 427
V +H Y ++S + +++ N
Sbjct: 188 TGNTVFSIHMYGVYS---QASTITSYLEHFVNA 217
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 89.0 bits (220), Expect = 4e-19
Identities = 41/194 (21%), Positives = 78/194 (40%), Gaps = 18/194 (9%)
Query: 65 GTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNET-FYNFRVNNKQFIG 123
QV + ++ ++ G + AN+ + ETF+L +T FR + ++
Sbjct: 260 CAQVVLQA-ANERNVSTRQGMD--LSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWT 316
Query: 124 LENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSS 183
L G G+ + +++ S F I +D R+ L ASNG F+ + +L A ++
Sbjct: 317 LTATG---GVQSTASSKNASCYFDIEWRDR---RITLRASNGKFVTSKKNGQLAASVETA 370
Query: 184 SWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINA 243
+ + RGE+ G K L + SY + F+ ++G
Sbjct: 371 GDSELFLMKLINRPIIVFRGEHGF---IGCRKVTGTLDANRSSY---DVFQLEFNDGAYN 424
Query: 244 VRIPVG--WWIAND 255
++ G W + +D
Sbjct: 425 IKDSTGKYWTVGSD 438
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 2e-05
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 77 KYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAV 136
K++ ++ G + A+ +A E F + +N FR + FIG + G +
Sbjct: 353 KFVTSKKNGQ--LAASVETAGDSELFLMKLINRPIIVFRGEHG-FIGCR---KVTGTLDA 406
Query: 137 SNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTAD 179
N + Y + FQ+ DG + S G + S++ +T+
Sbjct: 407 -NRSSY-DVFQLEFNDG---AYNIKDSTGKYWTVGSDSAVTSS 444
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Length = 294 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 6e-19
Identities = 30/210 (14%), Positives = 62/210 (29%), Gaps = 32/210 (15%)
Query: 224 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 283
W ++ G N +RI + + + + AE+ +
Sbjct: 28 WYKDTASTAIPAIAEQGANTIRIVLSDGGQWEKDDID--------TIREVIELAEQNKMV 79
Query: 284 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 343
+V++H A G + ++ + D + E + + I + NE
Sbjct: 80 AVVEVHDATGRDSRSDLNRAVDYWIE---------------MKDALIGKEDTVIINIANE 124
Query: 344 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFASGLSR 397
Y +R T +++ D+ + + A L
Sbjct: 125 WY-GSWDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKN 183
Query: 398 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQ 427
+ +H Y + V+ NID V +Q
Sbjct: 184 TMFSIHMYE--YAGGDANTVRSNIDRVIDQ 211
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Length = 345 | Back alignment and structure |
|---|
Score = 84.2 bits (208), Expect = 5e-18
Identities = 30/210 (14%), Positives = 61/210 (29%), Gaps = 32/210 (15%)
Query: 224 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 283
W ++ G N +RI + + + + AE+ +
Sbjct: 51 WYKDTASTAIPAIAEQGANTIRIVLSDGGQWEKDDID--------TVREVIELAEQNKMV 102
Query: 284 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 343
+V++H A G + ++ D + E + + I + NE
Sbjct: 103 AVVEVHDATGRDSRSDLDRAVDYWIE---------------MKDALIGKEDTVIINIANE 147
Query: 344 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFASGLSR 397
Y +R T +++ D+ + + A L
Sbjct: 148 WY-GSWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKN 206
Query: 398 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQ 427
+ +H Y + V+ NID V +Q
Sbjct: 207 TIFSIHMYE--YAGGDANTVRSNIDRVIDQ 234
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Length = 293 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 8e-18
Identities = 28/183 (15%), Positives = 57/183 (31%), Gaps = 22/183 (12%)
Query: 225 DSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 283
+ + T E + +R +G + G+ LD + A +
Sbjct: 36 EKFYTAETVAKAKTEFNATLIRAAIGHG-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMY 94
Query: 284 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 343
VI+D H+ + A V + +A +Y ++ E+ NE
Sbjct: 95 VIIDFHSHEAHTDQ------------------ATAVRFFEDVATKYGQYDNV-IYEIYNE 135
Query: 344 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 403
PL + +K Y + D +R +++ D + + +H
Sbjct: 136 PLQISWV-NDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLH 194
Query: 404 YYN 406
+Y
Sbjct: 195 FYA 197
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Length = 291 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 4e-17
Identities = 43/294 (14%), Positives = 83/294 (28%), Gaps = 72/294 (24%)
Query: 223 HWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 281
+ + T + L + + VR +G + G+ ++ D A
Sbjct: 34 GGEKFYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPA---GNKAKVERVVDAAIAND 90
Query: 282 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 341
+ I+ H+ N ++ + +A +Y N+P++ E+
Sbjct: 91 MYAIIGWHSHSAEN------------------NRSEAIRFFQEMARKYGNKPNV-IYEIY 131
Query: 342 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 401
NEPL + +T+K Y +A A+R +I+ + E +
Sbjct: 132 NEPLQVSWS-NTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYT 190
Query: 402 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQI 461
+H+Y +G +++ N L
Sbjct: 191 LHFY----AGTHGESLRNKARQALNN-----------GIAL------------------- 216
Query: 462 RIRKRNLWLNFVGEW-TCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 514
FV EW T + Q +A + A WA
Sbjct: 217 ----------FVTEWGTVNADGNGGVNQTE---TDAWVTFMRDNNISNANWALN 257
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Length = 353 | Back alignment and structure |
|---|
Score = 80.9 bits (199), Expect = 1e-16
Identities = 17/141 (12%), Positives = 42/141 (29%), Gaps = 10/141 (7%)
Query: 209 NGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPT-----PPKPFV 263
+ D ++ + + S+G N+VR+ + + P
Sbjct: 29 VNYARDFGHNQYSKGKSTF--ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGID 86
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 323
+ A+++ + + L Q+ H + + +
Sbjct: 87 NTLISDMRAYLHAAQRHNILIFFTLWNGAVKQST--HYRLNGLMVDTRKLQ-SYIDHALK 143
Query: 324 FLAARYANRPSLAAIELINEP 344
+A N +L +++NEP
Sbjct: 144 PMANALKNEKALGGWDIMNEP 164
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Length = 464 | Back alignment and structure |
|---|
Score = 81.3 bits (200), Expect = 1e-16
Identities = 32/210 (15%), Positives = 60/210 (28%), Gaps = 32/210 (15%)
Query: 224 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 283
W + +++ G N VRI + + + N AE +
Sbjct: 36 WYKDQATTAIEGIANTGANTVRIVLSDGGQWTKDDIQ--------TVRNLISLAEDNNLV 87
Query: 284 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 343
++++H A G + + D + E + + + I + NE
Sbjct: 88 AVLEVHDATGYDSIASLNRAVDYWIE---------------MRSALIGKEDTVIINIANE 132
Query: 344 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFASGLSR 397
YK +R +++ D+ + A
Sbjct: 133 WFGSWDG-AAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRN 191
Query: 398 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQ 427
+ +H Y N V+ NID V NQ
Sbjct: 192 TMFSIHMYE--YAGGNASQVRTNIDRVLNQ 219
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} Length = 155 | Back alignment and structure |
|---|
Score = 74.3 bits (182), Expect = 6e-16
Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 18/144 (12%)
Query: 40 GNWLVTEGWMKPSRFDDIPNKDLLDGTQVQFMSTKFQKYIAAESGG----GTIVVANRTS 95
+ W S F +I ++ YI A G G
Sbjct: 6 SGLDIVGIWWTVSNFGEIS-----GTIAIEMDK---GAYIHALDNGLFTLGAPHREVDEG 57
Query: 96 ASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDS 155
S E F +++++ + +++G+ + G +V S+ G E ++ V +DG
Sbjct: 58 PSPPEQFTAVKLSDSRIALKSGYGKYLGINSDGL---VVGRSDAIGPREQWEPVFQDG-- 112
Query: 156 SRVRLSASNGMFIQAISETRLTAD 179
++ L ASN FI+ + A
Sbjct: 113 -KMALLASNSCFIRCNEAGDIEAK 135
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} Length = 155 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 6e-06
Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 77 KYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAV 136
KY+ S G +VV + E + + N+ FI G + A
Sbjct: 82 KYLGINSDG--LVVGRSDAIGPREQWEPVFQDGKMALLASNSC-FIRCNEAGD---IEAK 135
Query: 137 SNTAGYSETFQI 148
+ TAG E +I
Sbjct: 136 NKTAGEEEMIKI 147
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Length = 481 | Back alignment and structure |
|---|
Score = 77.7 bits (190), Expect = 2e-15
Identities = 55/368 (14%), Positives = 99/368 (26%), Gaps = 94/368 (25%)
Query: 200 TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP 259
LRG N K+ D + + + + G N VR + W P
Sbjct: 46 ILRG----FNTASSAKSAP---DGMPQFTEADLAREYADMGTNFVRFLISWRSVEP--AP 96
Query: 260 KPFVGGSSKVLDNAFDWAEKYGVKVIVDLH-------AAPGSQNGNEHSATRDGFQEW-- 310
+ +++ W + G KV++D+H P +GN A +G W
Sbjct: 97 GVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIGNGAPAWAT 156
Query: 311 -----------------------------------GDSNVADTVAVIDFLAARYANRPSL 335
V +A R+A+ ++
Sbjct: 157 YMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAV 216
Query: 336 AAIELINEPLA-----PGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPAD 384
A +L+NEP P L + Y+ DA+R+ +V + N+ P+
Sbjct: 217 VAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSG 276
Query: 385 HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTF 444
++ +G R+ H Y L + +G A
Sbjct: 277 LTKIDDPRAGQQRIAYCPHLYPLPLDIGDGHEGLARTLTDVTIDAWRANTAH-------- 328
Query: 445 VGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRA 504
R +G + D + + +
Sbjct: 329 -----------------TARVLGDVPIILGSFGL-----DTTLPGARDYIERVYGTAREM 366
Query: 505 TFGWAYWA 512
G +YW+
Sbjct: 367 GAGVSYWS 374
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Length = 364 | Back alignment and structure |
|---|
Score = 76.2 bits (187), Expect = 3e-15
Identities = 39/302 (12%), Positives = 86/302 (28%), Gaps = 64/302 (21%)
Query: 224 WDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 282
+ + + F LS++ G N +R+ + T P+ ++ + A ++ +
Sbjct: 50 FGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-----DLVYEGIELAFEHDM 104
Query: 283 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAI--EL 340
VIVD H + + F + + +A Y + P I EL
Sbjct: 105 YVIVDWHVHAPGDPRADVYSGAYDF--FEE------------IADHYKDHPKNHYIIWEL 150
Query: 341 INEPLAPG----------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS 390
NEP + +K Y + + +R+ ++ +
Sbjct: 151 ANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWS-QRPDLSAD 209
Query: 391 FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVT 450
++ VH+Y + + + +++ + +
Sbjct: 210 NPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAV-------- 261
Query: 451 SALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAY 510
F EW + + Y A+ L+ + WA
Sbjct: 262 ---------------------FATEWG--TSQANGDGGPYFDEADVWLNFLNKHNISWAN 298
Query: 511 WA 512
W+
Sbjct: 299 WS 300
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Length = 491 | Back alignment and structure |
|---|
Score = 75.1 bits (183), Expect = 1e-14
Identities = 42/309 (13%), Positives = 74/309 (23%), Gaps = 37/309 (11%)
Query: 223 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 282
W + + + G NAV + + P P G + +D + + G+
Sbjct: 35 EWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGL 94
Query: 283 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 342
+++ + + N N RD ++ A RYA + E+ N
Sbjct: 95 YLVITIGNGANNGNHN-AQWARDFWKF---------------YAPRYAKETHV-LYEIHN 137
Query: 343 EPLAPG-------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 395
EP+A G Y +R Y V++ + G
Sbjct: 138 EPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGG-------KGGA 190
Query: 396 SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALIC 455
+ + D+ +N +N + N A A
Sbjct: 191 AEALKDIRAFNKAVFGN------ENAVWTNEAVAFHGYAGWQETTIAVEELLKAGYPCFM 244
Query: 456 KRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 515
L+ + E Y DV F
Sbjct: 245 TEYAGGAWGSGMGGLDVELTYELERLGVSWLTFQYIPPTGVSDDVTKPEYFSALVENSGL 304
Query: 516 EANHWSLKW 524
W
Sbjct: 305 SWTPDYGNW 313
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Length = 344 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 7e-11
Identities = 40/301 (13%), Positives = 79/301 (26%), Gaps = 50/301 (16%)
Query: 230 DEDFKFLSSNGINAVRIPV-------------GWWIANDPTPPKPFVGGSSKVLDNAFDW 276
D F +SS+G+ VR+ + + + LD
Sbjct: 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQS 98
Query: 277 AEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE---WGDSNV-ADTVAVIDFLAARYANR 332
AE++ +K+I+ G G + ++ + + +RYAN
Sbjct: 99 AEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANS 158
Query: 333 PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYV-IMSNRLGPADHKELLSF 391
++ A EL NEP G + D + + + V+ S V + LG + +
Sbjct: 159 TAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPY 218
Query: 392 ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTS 451
G ++D+ + +
Sbjct: 219 TYGEGTDFAKNVQIK-------------SLDFGTFH----------LYPDSWGTNYTWGN 255
Query: 452 ALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYW 511
I + E+ + + + L G G +W
Sbjct: 256 GWIQTHAAACLAAGKPCVF-------EEYGAQQNPCTNEAPWQTTSLTTRGMG--GDMFW 306
Query: 512 A 512
Sbjct: 307 Q 307
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Length = 399 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 2e-09
Identities = 44/223 (19%), Positives = 73/223 (32%), Gaps = 30/223 (13%)
Query: 223 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS---KVLDNAFDWAEK 279
+ +S + FK L G+N VR+ + W + GG++ K + A
Sbjct: 44 YNESGKKQDIFKTLKEAGVNYVRVRI--WNDPYDANGNGYGGGNNDLEKAIQIG-KRATA 100
Query: 280 YGVKVIVDLH-----AAPGSQNGNEHSATRDGFQEWGDSNVADTVA--VIDFLAARYANR 332
G+K++ D H A P Q + A + + + L A A
Sbjct: 101 NGMKLLADFHYSDFWADPAKQKAPKAWANLNF------EDKKTALYQYTKQSLKAMKAAG 154
Query: 333 PSLAAIELINEP---LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 389
+ +++ NE LA + + AG AVR+ S V + P
Sbjct: 155 IDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFT-NPETSGRYA 213
Query: 390 SFASGLSRV-----VIDVHYYNLFSNNFNGLNVQQNIDYVNNQ 427
A L R V YY + N+ + V +
Sbjct: 214 WIAETLHRHHVDYDVFASSYYPFWHGTLK--NLTSVLTSVADT 254
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Length = 373 | Back alignment and structure |
|---|
Score = 51.1 bits (121), Expect = 5e-07
Identities = 37/217 (17%), Positives = 67/217 (30%), Gaps = 33/217 (15%)
Query: 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--KVLDNAFDWAEK 279
D F+ S +N R + P P V + LD A+K
Sbjct: 37 DPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKK 96
Query: 280 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVAD----------TVAVIDFLAAR- 328
YG+ +I+ L + G + + ++ D + + R
Sbjct: 97 YGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRV 156
Query: 329 -------YANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVI----- 375
Y + P++ + ELINEP P ++ T +++ ++ S +
Sbjct: 157 NTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEG 216
Query: 376 ----MSNRLGPADHKELLSFASGLSRVVIDV---HYY 405
+ P + +F S ID H Y
Sbjct: 217 FYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMY 253
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Length = 440 | Back alignment and structure |
|---|
Score = 49.7 bits (117), Expect = 2e-06
Identities = 27/230 (11%), Positives = 55/230 (23%), Gaps = 45/230 (19%)
Query: 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--------KVLDN 272
+ D ++ L + G+N +R+ + + KP V + LD
Sbjct: 56 NEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDY 115
Query: 273 AFDWAEKYGVKVIVDL---HAAPGSQN------GNEHSATRDGFQEWGDSNVADTVAVID 323
K + V++ G E + EW
Sbjct: 116 LLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRS 175
Query: 324 --------------------FLAARYANRPSLAAIELINEPLAPGVA-----LDTLKSYY 358
Y + ++ + +L NEP +
Sbjct: 176 EKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWV 235
Query: 359 KAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID---VHYY 405
A ++ + V + ++ F + ID H +
Sbjct: 236 HAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMW 285
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 2e-05
Identities = 67/405 (16%), Positives = 114/405 (28%), Gaps = 124/405 (30%)
Query: 203 GEYQITNGFGPDKAPQVLQDHWDSYITDEDFK------------------FLSSNGINAV 244
GE+Q +L D+++ + D K +S + ++
Sbjct: 12 GEHQYQYK-------DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64
Query: 245 RIPVGWWIANDPTPP-KPFVGGSSKVLDNAFDW-AEKYGVKVIVDLHAAPGSQNGNEHSA 302
+ W + + + FV VL + + + P S +
Sbjct: 65 LR-LFWTLLSKQEEMVQKFVEE---VLRINYKFLMSPIKTEQR-----QP-SMMTRMYIE 114
Query: 303 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSL------AAIELINEPLA-----PG--- 348
RD + + D+ V A +R A +EL G
Sbjct: 115 QRD--RLYNDNQV---------FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163
Query: 349 --VALDTLKSY-------YKAGYDAVRKYTSTAYVI-MSNRLGPADHKELLSFASGLSRV 398
VALD SY +K + ++ S V+ M +L S + S +
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 399 VIDVHYYNLFSNNF-------NGLNVQQNIDYVNNQR---ASDLGA---VTTSNGPLTFV 445
+ +H N L V + V N + A +L +TT
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLV---LLNVQNAKAWNAFNLSCKILLTTRF------ 274
Query: 446 GKSVTSALICKRCTQIRIRKRN----------LWLNFVGEWTCEWNVKDASKQDYQR--- 492
K VT L T I + + L L ++ +D ++
Sbjct: 275 -KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC-----RPQDLPREVLTTNPR 328
Query: 493 ----FANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 533
A + D W W H N L +IE+ L
Sbjct: 329 RLSIIAESIRDGLAT----WDNWKH---VNCDKLTTIIESSLNVL 366
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Length = 334 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 3e-05
Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 34/221 (15%)
Query: 229 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 288
T L+ GIN++R V W+ P L+ A + G+ + +DL
Sbjct: 29 TQALETILADAGINSIRQRV--WV-----NPSDGSYDLDYNLELA-KRVKAAGMSLYLDL 80
Query: 289 H-----AAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 343
H A P Q +T D + + + N + I + NE
Sbjct: 81 HLSDTWADPSDQTTPSGWSTTDLGTLKWQ--LYNYTL--EVCNTFAENDIDIEIISIGNE 136
Query: 344 -------PLAPGVALDTLKSYYKAGYDAVRKYT-STAYVIMSNRLGPADHKELLSFASGL 395
PL + + + +G V+ +T IM + + F +
Sbjct: 137 IRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETV 196
Query: 396 SRV---------VIDVHYYNLFSNNFNGLNVQQNIDYVNNQ 427
V YY +S + +++ ++ + +
Sbjct: 197 LATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQST 237
|
| >3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A Length = 132 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 9e-05
Identities = 13/88 (14%), Positives = 25/88 (28%), Gaps = 8/88 (9%)
Query: 64 DGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNF--RVNNKQF 121
+V ST+ +++ G V R + F+ QF
Sbjct: 46 GNGEVLLRSTETGQFLRINPDGT--VDGTRDRSDPGIQFQ-ISPEGNGEVLLRSTETGQF 102
Query: 122 IGLENQGQGNGLVAVSNTAGYSETFQIV 149
+ + G + + + FQI
Sbjct: 103 LRINPDGT---VDGTRDRSDPGIQFQIS 127
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 | Back alignment and structure |
|---|
Score = 43.0 bits (100), Expect = 2e-04
Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 21/155 (13%)
Query: 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK-PFVGGSSKVLDNAFDWAEKY 280
+HW ED + + G++ VRI W +P P + + LD A
Sbjct: 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEW-----GWLDEAIATLAAE 63
Query: 281 GVKVIVDL-HAAPGSQNGNEH----SATRDGFQEWGDSNV----------ADTVAVIDFL 325
G+KV++ A P + + R+G + + ++ L
Sbjct: 64 GLKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLL 123
Query: 326 AARYANRPSLAAIELINEPLAPGVALDTLKSYYKA 360
A RY ++A + NE +A
Sbjct: 124 AERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEA 158
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Length = 383 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 4e-04
Identities = 41/323 (12%), Positives = 89/323 (27%), Gaps = 53/323 (16%)
Query: 223 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--------------- 267
+ + + D + GI +RI + ++
Sbjct: 39 YKSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNG 98
Query: 268 -KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE------HSATRDGFQEWGDSNV-ADTV 319
+ LD A++ G+K+I+ L G D F + D + +
Sbjct: 99 FERLDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGTHHDDF--YRDERIKEEYK 156
Query: 320 AVIDFLAAR--------YANRPSLAAIELINEP-LAPGVALDTLKSYYKAGYDAVRKYTS 370
+ FL Y P++ A EL NE + +TL + K ++
Sbjct: 157 KYVSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDP 216
Query: 371 TAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRAS 430
V + + ++++ + + Y ++ L + +D+
Sbjct: 217 NHLVAVGDEGFFSNYEGFKPYGGEA-----EWAYNGWSGVDWKKLLSIETVDFGTFHLYP 271
Query: 431 DLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDY 490
G + I + + + L E+ + ++ +
Sbjct: 272 S------HWGVSPENYAQWGAKWIEDHIKIAKEIGKPVVLE-------EYGIPKSAPVNR 318
Query: 491 QRFANAQLD-VYGRATFGWAYWA 512
D VY G +W
Sbjct: 319 TAIYRLWNDLVYDLGGDGAMFWM 341
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 534 | |||
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 100.0 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 100.0 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 100.0 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 100.0 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 100.0 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 100.0 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 100.0 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 100.0 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 100.0 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 100.0 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 100.0 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 100.0 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 100.0 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 100.0 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 99.98 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 99.98 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 99.98 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 99.97 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 99.97 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 99.97 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 99.97 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 99.97 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 99.97 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 99.97 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 99.97 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 99.97 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 99.97 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 99.97 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 99.96 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 99.89 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 99.89 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 99.88 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 99.88 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 99.87 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 99.84 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 99.82 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 99.8 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 99.78 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 99.69 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 99.67 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 99.66 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.46 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 99.43 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.41 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.32 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.26 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 99.25 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 99.24 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 99.21 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.21 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 99.19 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 99.19 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 99.17 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 99.14 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.13 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 99.13 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 99.11 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 99.1 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 99.06 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.05 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 99.05 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 99.0 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 99.0 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 99.0 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 99.0 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 98.98 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 98.9 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 98.85 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 98.83 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 98.77 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 98.75 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 98.74 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.72 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 98.71 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 98.71 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 98.71 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 98.71 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 98.7 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 98.7 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 98.7 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 98.69 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 98.65 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 98.65 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 98.64 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 98.62 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.58 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 98.57 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 98.54 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 98.53 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.51 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 98.51 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.5 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 98.49 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 98.48 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 98.48 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 98.47 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 98.47 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 98.45 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 98.45 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 98.44 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 98.41 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 98.4 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 98.4 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 98.4 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 98.38 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 98.34 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 98.33 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 98.32 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 98.32 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 98.32 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 98.29 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 98.28 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 98.26 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 98.19 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 98.18 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.11 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 98.09 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 98.03 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 97.86 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 97.86 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 97.83 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 97.67 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 97.65 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.52 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 97.52 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 97.47 | |
| 3ug3_A | 504 | Alpha-L-arabinofuranosidase; TIM barrel, hydrolase | 97.27 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 97.26 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.22 | |
| 2vrq_A | 496 | Alpha-L-arabinofuranosidase; hydrolase, glycosidas | 97.14 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 97.1 | |
| 3vny_A | 488 | Beta-glucuronidase; TIM barrel, greek-KEY, glycosi | 97.08 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 97.0 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 96.84 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 96.79 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 96.71 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 96.36 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 96.05 | |
| 1jlx_A | 303 | Agglutinin, amaranthin, ACA; complex (lectin/sacch | 95.77 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 95.71 | |
| 1jlx_A | 303 | Agglutinin, amaranthin, ACA; complex (lectin/sacch | 95.56 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 95.23 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 95.09 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 95.08 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 95.08 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 95.03 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 94.84 | |
| 2yih_A | 524 | CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca | 94.82 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 94.71 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 94.65 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 93.94 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 93.85 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 93.5 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 93.41 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 93.4 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 93.2 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 93.11 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 93.08 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 92.62 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 92.29 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 92.15 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 91.99 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 91.89 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 91.88 | |
| 2ya1_A | 1014 | Putative alkaline amylopullulanase; hydrolase, gly | 91.42 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 91.23 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 90.89 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 90.73 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 90.64 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 90.58 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 90.34 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 90.3 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 90.24 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 90.17 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 90.13 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 90.12 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 90.09 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 89.99 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 89.95 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 89.94 | |
| 2fhf_A | 1083 | Pullulanase; multiple domain, beta-alpha-barrel, a | 89.67 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 89.59 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 89.45 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 89.37 | |
| 4aw7_A | 591 | GH86A beta-porphyranase; hydrolase, porphyran-hexa | 89.34 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 89.29 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 89.25 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 89.16 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 89.1 | |
| 4aio_A | 884 | Limit dextrinase; hydrolase, pullulanase, glycosid | 89.05 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 88.9 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 88.81 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 88.72 | |
| 2vx5_A | 396 | Cellvibrio japonicus mannanase cjman26C; hydrolase | 88.61 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 88.54 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 88.53 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 88.47 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 88.46 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 88.32 | |
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 88.09 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 88.01 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 87.94 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 87.85 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 87.73 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 87.54 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 87.5 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 87.31 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 87.24 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 87.2 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 86.46 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 86.4 | |
| 3nbc_A | 148 | Ricin B-like lectin; lactose, sugar BIND protein; | 86.02 | |
| 3ik2_A | 517 | Endoglucanase A; TIM-like barrel, hydrolase; 2.20A | 85.98 | |
| 1hcd_A | 118 | Hisactophilin; actin binding; NMR {Dictyostelium d | 85.83 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 85.7 | |
| 2e4t_A | 519 | Endoglucanase, xyloglucanase; TIM barrel, TIM-like | 84.87 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 83.81 | |
| 3snv_A | 143 | Symfoil-4T/permutation #1 synthetic protein; beta- | 83.28 | |
| 3ef2_A | 293 | Agglutinin, lectin; beta-trefoil, calcium-binding, | 83.15 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 83.11 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 82.97 | |
| 4a4a_A | 914 | Alpha-N-acetylglucosaminidase family protein; hydr | 82.51 | |
| 3aj6_A | 286 | Main hemagglutinin component; toxin, beta-trefoil; | 82.37 | |
| 3q7x_A | 132 | De novo designed beta-trefoil architecture with S | 81.9 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 81.77 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 81.17 | |
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 81.01 | |
| 3tp4_A | 475 | Computational design of enzyme; structural genomic | 80.6 | |
| 2v3g_A | 283 | Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich | 80.26 |
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-68 Score=561.26 Aligned_cols=313 Identities=33% Similarity=0.584 Sum_probs=265.4
Q ss_pred ccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCC
Q 009475 202 RGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 281 (534)
Q Consensus 202 ~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G 281 (534)
.+||++|+.+|.++|++++++||++|||++||+.||++|+|+|||||+||.+ ++.+++||..+.+++||++|++|+++|
T Consensus 48 ~dE~~l~~~lG~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipi~~~~~-~~~~~~py~~~~~~~ld~vV~~a~~~G 126 (399)
T 3n9k_A 48 VDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYWAF-QLLDNDPYVQGQVQYLEKALGWARKNN 126 (399)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGT-CCCTTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHhCHHHHHHHHHHhhcccCcHHHHHHHHHcCCCEEEEcccHHHc-cCCCCCccchhHHHHHHHHHHHHHHCC
Confidence 4789999999999999999999999999999999999999999999999976 444556887779999999999999999
Q ss_pred CEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCC---CeEEEEEeccCCCCCCCChHHHHHH
Q 009475 282 VKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANR---PSLAAIELINEPLAPGVALDTLKSY 357 (534)
Q Consensus 282 l~VIlDlH~~pG~qng~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~---~~vlg~eL~NEP~~~~~~~~~~~~~ 357 (534)
|+||||+|++||+||+.+++|.+ +...|. +.+.++++++|++||+||+++ |.|++|||+|||..+..+.+.|++|
T Consensus 127 l~VILDlH~~pG~qng~~~sG~~-~~~~w~~~~~~~~~~~~w~~iA~ry~~~~y~~~V~~~el~NEP~~~~~~~~~~~~~ 205 (399)
T 3n9k_A 127 IRVWIDLHGAPGSQNGFDNSGLR-DSYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQF 205 (399)
T ss_dssp CEEEEEEEECTTCSSCCGGGSST-TCCCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHH
T ss_pred CEEEEEecCCCcccccccCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhcccCCCceEEEEeccCCCCCCCCHHHHHHH
Confidence 99999999999999999999876 455677 678999999999999999999 9999999999999755668899999
Q ss_pred HHHHHHHHHhcCCceEEEEeCCCCC-CChhhhhcccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhh
Q 009475 358 YKAGYDAVRKYTSTAYVIMSNRLGP-ADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 436 (534)
Q Consensus 358 ~~~~~~aIR~~~p~~~Iiv~~~~~~-~~~~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~ 436 (534)
+++++++||+++|+++|++++++.+ ..+..++..+.+++|+|||+|+|.+|+.....++.+++|+.+|+... . +.
T Consensus 206 ~~~a~~~IR~~~p~~~Iii~dg~~~~~~W~~~l~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~~c~~~~-~---~~ 281 (399)
T 3n9k_A 206 FLDGYNSLRQTGSVTPVIIHDAAQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGW-D---AK 281 (399)
T ss_dssp HHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCCSEEEEEECCSCSSHHHHTSCHHHHHHHHHHHHH-H---HH
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCCChHHHHhhcccccCCCCEEEEeccccCCCcccccCCHHHHHHHHHHHHH-H---Hh
Confidence 9999999999999999999987764 34555555434679999999999999977777899999999997542 2 23
Q ss_pred ccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccc---ccccc----------------CCCcccHHHHHHHHHHH
Q 009475 437 TSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGE---WTCEW----------------NVKDASKQDYQRFANAQ 497 (534)
Q Consensus 437 ~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGE---ws~~~----------------~~~~a~~~~~~~~~~aq 497 (534)
+. .+++||||||.|.+||+++ +|++|. |.+.+ ..+...++.+++|+++|
T Consensus 282 ~~-~~~~ivGEwS~a~~dc~~~-----------lng~~~g~r~~gt~~~~~~~g~c~~~~~~~~~~~~~k~~~~~f~~aQ 349 (399)
T 3n9k_A 282 KE-SHWNVAGSWSAALTDCAKW-----------LNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEAQ 349 (399)
T ss_dssp TC-SSEEEEEECCSCSSSCSTT-----------TTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCCHHHHHHHHHHHHHH
T ss_pred cC-CCCEEEEecccccccchhh-----------ccCCCccccccccCCCCCcCCcCcCcCccccccHHHHHHHHHHHHHH
Confidence 33 3578999999999999874 444431 11111 11233567899999999
Q ss_pred HHHHhcCCCcEEEEccccCC-CCCChhHHHHCCCccc
Q 009475 498 LDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 533 (534)
Q Consensus 498 ~~~~e~~~~GW~fWt~K~~~-~~Ws~~~~v~~g~i~~ 533 (534)
+++||+ +.||+|||||+|+ ++|||+.++++|+||.
T Consensus 350 ~~~~e~-~~Gw~fWtwK~e~~~~W~~~~~~~~g~~p~ 385 (399)
T 3n9k_A 350 LDAFEY-TGGWVFWSWKTENAPEWSFQTLTYNGLFPQ 385 (399)
T ss_dssp HHHHHT-TTEEEESCSCCSSCGGGCHHHHHHTTCSCS
T ss_pred HHHHHc-CCcEEEeeeecCCCCCCCHHHHHhCCCcCC
Confidence 999997 5599999999997 8999999999999985
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-62 Score=520.67 Aligned_cols=322 Identities=30% Similarity=0.564 Sum_probs=257.1
Q ss_pred ccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCc-hHHHHHHHHHHHHHC
Q 009475 202 RGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGG-SSKVLDNAFDWAEKY 280 (534)
Q Consensus 202 ~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~-~l~~ld~~v~~a~~~ 280 (534)
.+||++|+.+|.+++.+++++||++++|++||+.||++|+|+|||||+||.+. +.++.||..+ .+++||++|++|+++
T Consensus 48 ~dE~~l~~~lG~~~a~~~~~~hw~~~~te~d~~~i~~~G~N~VRipi~~~~~~-~~~~~py~~~~~l~~ld~vv~~a~~~ 126 (408)
T 1h4p_A 48 VDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQ-ILDDDPYVSGLQESYLDQAIGWARNN 126 (408)
T ss_dssp SSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGTC-CCTTCCCCCSSHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEccCCHHHcc-cCCCCCCccccHHHHHHHHHHHHHHC
Confidence 57999999999999999999999999999999999999999999999999764 4455678776 999999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCC---CeEEEEEeccCCCCCCCChHHHH-
Q 009475 281 GVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANR---PSLAAIELINEPLAPGVALDTLK- 355 (534)
Q Consensus 281 Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~---~~vlg~eL~NEP~~~~~~~~~~~- 355 (534)
||+||||+|++||+||+++++|.. +...|. +.+.++++++|++||+||+++ |.|++|||+|||+....+.+.|+
T Consensus 127 Gi~VilDlH~~pG~qng~~~sG~~-~~~~w~~~~~~~~~~~~w~~ia~ry~~~~y~~~Vi~~el~NEP~~~~~~~~~~~~ 205 (408)
T 1h4p_A 127 SLKVWVDLHGAAGSQNGFDNSGLR-DSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKN 205 (408)
T ss_dssp TCEEEEEEEECTTCSSCCGGGSST-TCCCTTSHHHHHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHH
T ss_pred CCEEEEECCCCCCccCCccCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHcccCCCCeEEEEEeccCCCCCCCCHHHHHH
Confidence 999999999999999999988865 566787 778899999999999999998 99999999999997545678998
Q ss_pred HHHHHHHHHHHhc-CCceEEEEeCCCCC-CChhhhhcccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhh
Q 009475 356 SYYKAGYDAVRKY-TSTAYVIMSNRLGP-ADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLG 433 (534)
Q Consensus 356 ~~~~~~~~aIR~~-~p~~~Iiv~~~~~~-~~~~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~ 433 (534)
+|+++++++||++ +++++||+++++.+ ..+..++.....++|+||++|+|.+|+....+.+.+++++++|+....
T Consensus 206 ~~~~~~~~~IR~~~~~~~~iii~dg~~~~~~w~~~l~~~~~~~nvv~s~H~Y~~~~~~~~~~~~~~~i~~~~~~~~~--- 282 (408)
T 1h4p_A 206 DYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTG--- 282 (408)
T ss_dssp HTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSEEEEEEECSCSSHHHHTCCHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHhhcCCCCceEeeecccCchhhhhhccccCCCCCEEEEeeeccCCCCccccCCHHHHHHHHHHHHHH---
Confidence 9999999999999 89888888766532 334444443335679999999999987544456678888888754332
Q ss_pred hhhccCCCeEEEeecccchhhhhhhhhhhhhh-c--cccc------cccccccccc-----CCCcccHHHHHHHHHHHHH
Q 009475 434 AVTTSNGPLTFVGKSVTSALICKRCTQIRIRK-R--NLWL------NFVGEWTCEW-----NVKDASKQDYQRFANAQLD 499 (534)
Q Consensus 434 ~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~-~--~~~~------~~vGEws~~~-----~~~~a~~~~~~~~~~aq~~ 499 (534)
+.. .+.++|+|||+.+.+||+.+....... + +.+. -.+| +|.- ..+...++.+++|+++|++
T Consensus 283 -~~~-~~~pvivGE~g~~~~dc~~~lng~~~g~~~~g~~~~~~~~~~~~~--~c~~~~~~~~~~~~~k~~~~~~~~aq~~ 358 (408)
T 1h4p_A 283 -VLN-ESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIG--SCANNDDIAYWSDERKENTRRYVEAQLD 358 (408)
T ss_dssp -HTT-CSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCS--CCTTTTCGGGCCHHHHHHHHHHHHHHHH
T ss_pred -Hhh-cCCCeEEEeccccccchHhhhcccccccccCCccccCccCCCccC--cccCCCChhhccHHHHHHHHHHHHHHHH
Confidence 112 244678899999999998754321100 0 0000 0011 1110 0123356789999999999
Q ss_pred HHhcCCCcEEEEccccCC-CCCChhHHHHCCCccc
Q 009475 500 VYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 533 (534)
Q Consensus 500 ~~e~~~~GW~fWt~K~~~-~~Ws~~~~v~~g~i~~ 533 (534)
+||++. ||+|||||+++ ++|||+.++++|+||.
T Consensus 359 ~~~~~~-Gw~fWt~K~e~~~~W~~~~~~~~g~~p~ 392 (408)
T 1h4p_A 359 AFEMRG-GWIIWCYKTESSLEWDAQRLMFNGLFPQ 392 (408)
T ss_dssp HHTTTT-EEEESCSCCSSCSTTCHHHHHHTTSSCS
T ss_pred HHhhcC-CeEEEeEecCCCCCCCHHHHHHCCCCCC
Confidence 999765 99999999998 8999999999999985
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=310.32 Aligned_cols=274 Identities=20% Similarity=0.319 Sum_probs=197.2
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
++||+++++++||+.||++|+|+|||||.|+.+.+...+..++++.+++||++|++|+++||+||||+|+.||++....
T Consensus 22 ~~~~~~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~~~g~~~~~~- 100 (343)
T 1ceo_A 22 KEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQDF- 100 (343)
T ss_dssp HHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC-------
T ss_pred hhhhhcccCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecCCCccccCCC-
Confidence 4589999999999999999999999999988665433334677789999999999999999999999999998753211
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC-
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN- 378 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~- 378 (534)
+ +...|. +...+++.++|++||+||+++|.+++|||+|||+.. ..+.|.+++++++++||+++|+++|++++
T Consensus 101 -~---~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~--~~~~~~~~~~~~~~~IR~~~p~~~i~v~~~ 174 (343)
T 1ceo_A 101 -K---TSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIGGN 174 (343)
T ss_dssp ------CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEECH
T ss_pred -C---cccCcCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCc--chHHHHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 1 113455 567899999999999999999999999999999963 35789999999999999999999999985
Q ss_pred CCCCCChhhhhcc-cCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeE--EEeecccchhhh
Q 009475 379 RLGPADHKELLSF-ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT--FVGKSVTSALIC 455 (534)
Q Consensus 379 ~~~~~~~~~~~~~-~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~--~vgEws~a~tdc 455 (534)
.|.+ ...+..+ +..++|+||++|+|.|+. |+|+...+.-.... .. ....-|.. .++||+++. +|
T Consensus 175 ~~~~--~~~~~~~~~~~~~~~v~~~H~Y~~~~--ft~~~~~w~~~~~~-~~-------~~~~yp~~~~~~~~~~~~~-~c 241 (343)
T 1ceo_A 175 NYNS--PDELKNLADIDDDYIVYNFHFYNPFF--FTHQKAHWSESAMA-YN-------RTVKYPGQYEGIEEFVKNN-PK 241 (343)
T ss_dssp HHHC--GGGGGGSCCCCCSSEEEEEEECCSHH--HHTTTCTTCHHHHH-HC-------CCCCSSEECCSHHHHHHHC-GG
T ss_pred CcCC--HHHHhhcCcCCCCCEEEEeeccCccc--cCcCCCCCCccccc-cc-------CCCCCCCcccchhhhhccc-hh
Confidence 2332 1222222 235689999999999864 44443322211100 00 00011211 134666655 56
Q ss_pred hhhhh-------------h------hhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccC
Q 009475 456 KRCTQ-------------I------RIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 516 (534)
Q Consensus 456 ~~~~~-------------~------~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~ 516 (534)
+.... . ....+.+.|+++|||++.. ..+.+...+|++++++++++.++||+||+||.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Pv~igEfG~~~---~~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 318 (343)
T 1ceo_A 242 YSFMMELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIA---IADLESRIKWHEDYISLLEEYDIGGAVWNYKKM 318 (343)
T ss_dssp GGGGGGGTTCEESHHHHHHHHHHHHHHHHHHCCEEEEEEECCCT---TSCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred hhhhhhccccccCHHHHHHHHHHHHHHHHHhCCCEEeccccccc---CCChHHHHHHHHHHHHHHHHcCCCeEEeecCCC
Confidence 54210 0 1123445678899999754 235667889999999999999999999999984
Q ss_pred C
Q 009475 517 A 517 (534)
Q Consensus 517 ~ 517 (534)
+
T Consensus 319 ~ 319 (343)
T 1ceo_A 319 D 319 (343)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=308.66 Aligned_cols=249 Identities=16% Similarity=0.208 Sum_probs=181.3
Q ss_pred hcc-CCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 222 DHW-DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 222 ~hw-~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
..| +.++|++||+.||++|+|+|||||+|+.+.++.++.+++++.+++||++|++|.++||+||||+|+.++..+
T Consensus 36 ~~W~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~~~w~~---- 111 (345)
T 3ndz_A 36 TNWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHENEWLK---- 111 (345)
T ss_dssp TTTSCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSCTTTCC----
T ss_pred CCCCCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCcccccc----
Confidence 346 567899999999999999999999998776655556778889999999999999999999999999985422
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC----------ChHHHHHHHHHHHHHHHhc-
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLKSYYKAGYDAVRKY- 368 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~----------~~~~~~~~~~~~~~aIR~~- 368 (534)
...|. +...++++++|++||+|||+++.+++|||+|||+.... ..+.+++++++++++||++
T Consensus 112 ------~~~~~~~~~~~~~~~~w~~iA~~y~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~i~aIR~~g 185 (345)
T 3ndz_A 112 ------PFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATG 185 (345)
T ss_dssp ------CSTTTHHHHHHHHHHHHHHHHHHTTTCCTTEEEESCSCCCCCSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ------ccccchHHHHHHHHHHHHHHHHHHcCCCCceEEEeccCCCCCCcccccCCCCchhHHHHHHHHHHHHHHHHhcC
Confidence 11233 57788999999999999999988889999999996421 1357889999999999999
Q ss_pred --CCceEEEEeCCCCCCChhhhhcccC--CCceEEEEEeecccCCCCCCCCc---hhh----hHHHHHhhhhhhhhhhhc
Q 009475 369 --TSTAYVIMSNRLGPADHKELLSFAS--GLSRVVIDVHYYNLFSNNFNGLN---VQQ----NIDYVNNQRASDLGAVTT 437 (534)
Q Consensus 369 --~p~~~Iiv~~~~~~~~~~~~~~~~~--~~~nvv~d~H~Y~~f~~~~~~~~---~~~----~i~~i~~~~~~~l~~~~~ 437 (534)
+|+++|++++...+.+...+..+.. .++|+||++|+|.||. |++.. ..+ ..+.+..........+.
T Consensus 186 ~~np~~~Iiv~g~~~~~~~~~~~~~~~P~~~~n~v~s~H~Y~p~~--f~~~~~g~~~w~~~~~~~~~~~~~~~~~~~~~- 262 (345)
T 3ndz_A 186 GNNATRYIMVPTLAASAMSTTINDLVIPNNDSKVIVSLHMYSPYF--FAMDINGTSSWGSDYDKSSLDSEFDAVYNKFV- 262 (345)
T ss_dssp GGGGTSCEEEECGGGCCSHHHHHHCCCGGGCTTEEEEEECCCSHH--HHTCTTSCSCCCSHHHHHHHHHHHHHHHHHTG-
T ss_pred CCCCCcEEEECCCccCcccchhhcccCCCCCCcEEEEEEecCchh--cccCCCCCcCCCCcccHHHHHHHHHHHHHHHH-
Confidence 6778999986433334333433332 3789999999999974 22211 111 11112111111111111
Q ss_pred cCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccc
Q 009475 438 SNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 514 (534)
Q Consensus 438 ~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K 514 (534)
.++.+++ +|||++... .+.+...+|++++++.+++.++||++|++.
T Consensus 263 ~~g~pv~----------------------------iGEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~g 308 (345)
T 3ndz_A 263 KNGRAVV----------------------------IGEMGSINK---NNTAARVTHAEYYAKSAKARGLTPIWWDNG 308 (345)
T ss_dssp GGTCCEE----------------------------EEEECCCCS---SCHHHHHHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HcCCcEE----------------------------EEeecCCCC---CCHHHHHHHHHHHHHHHHHCCCeEEEECCC
Confidence 1232333 788887532 345667889999999999999999999984
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=305.35 Aligned_cols=249 Identities=20% Similarity=0.341 Sum_probs=183.7
Q ss_pred CCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009475 226 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 305 (534)
Q Consensus 226 ~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~ 305 (534)
++++++||+.||++|+|+||||++||.+.++.++..+.++.+++||++|++|+++||+||||+|+.||++. +++...
T Consensus 35 ~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~pg~~~---~~~~~~ 111 (341)
T 1vjz_A 35 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSV---NKEVEE 111 (341)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEES---CTTSCC
T ss_pred CCCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCccc---ccCCCc
Confidence 67899999999999999999999998765443344567789999999999999999999999999998631 122222
Q ss_pred CCCCCC-hhhHHHHHHHHHHHHHHhcCC-CeEEEEEeccCCCCCCC---ChHHHHHHHHHHHHHHHhcCCceEEEEeC-C
Q 009475 306 GFQEWG-DSNVADTVAVIDFLAARYANR-PSLAAIELINEPLAPGV---ALDTLKSYYKAGYDAVRKYTSTAYVIMSN-R 379 (534)
Q Consensus 306 g~~~W~-~~~~~~~~~~w~~lA~ryk~~-~~vlg~eL~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~ 379 (534)
....|. +...+++.++|++||+||+++ |.+++|||+|||..... +.+.|++++++++++||+++|+++|++++ .
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~ia~ry~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~v~g~~ 191 (341)
T 1vjz_A 112 KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLG 191 (341)
T ss_dssp SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHH
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCCCcccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCCc
Confidence 234576 677899999999999999999 99999999999997432 34899999999999999999999999975 2
Q ss_pred CCCCChhhhhcccCCCceEEEEEeecccCCCCCCCCchhh---------------------hHHHHHhhhhhhhhhhhcc
Q 009475 380 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ---------------------NIDYVNNQRASDLGAVTTS 438 (534)
Q Consensus 380 ~~~~~~~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~---------------------~i~~i~~~~~~~l~~~~~~ 438 (534)
|+. ..+.. ..++|+||++|+|.||. +++....+ ..+++........
T Consensus 192 ~~~---~~~~~--l~~~n~v~s~H~Y~~~~--~~~~~~~w~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~------ 258 (341)
T 1vjz_A 192 YGN---IPVDD--LTIENTVQSCRGYIPFS--VTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWI------ 258 (341)
T ss_dssp HHT---BCCTT--CCCSSEEEEEEECCSHH--HHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHH------
T ss_pred CCc---ccccc--cCCCCeEEEEeeccCcc--ccccCcccccccccCCCCCCCcccccchhhHHHHHHHHHHHH------
Confidence 321 11111 23689999999999875 22211110 1111111111000
Q ss_pred CCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccCC
Q 009475 439 NGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 517 (534)
Q Consensus 439 ~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~ 517 (534)
...+ .+.++++|||++... .+++...+|+++|++++++.++||+||+||.+.
T Consensus 259 -----------------------~~~~-~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 310 (341)
T 1vjz_A 259 -----------------------KLRQ-KGIEVFCGEMGAYNK---TPHDVVLKWLEDLLEIFKTLNIGFALWNFRGPF 310 (341)
T ss_dssp -----------------------GGGG-GTCEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBSTT
T ss_pred -----------------------HHHH-hCCCeEEeccccccC---CChHHHHHHHHHHHHHHHHcCCceEEEecCCCc
Confidence 0111 223445888887542 346678899999999999999999999999853
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=296.89 Aligned_cols=245 Identities=20% Similarity=0.301 Sum_probs=183.3
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
++||+++++++||+.||++|+|+|||||.|+.+..+.++.++++..++.+|++|++|.++||+||||+|+.++.
T Consensus 35 ~~~w~~~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~~~------ 108 (320)
T 3nco_A 35 EGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEEL------ 108 (320)
T ss_dssp TTTTSCCCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHH------
T ss_pred CCccCCcCCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCccc------
Confidence 57999999999999999999999999999987665544456777889999999999999999999999986531
Q ss_pred CCCCCCCCCCC--hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 301 SATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 301 sg~~~g~~~W~--~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
|. +...+++.++|++||+||+++|.+++|||+|||+.. .+.+.|.+++++++++||+++|+++|++++
T Consensus 109 ---------~~~~~~~~~~~~~~~~~ia~~~~~~~~vv~~~l~NEP~~~-~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~ 178 (320)
T 3nco_A 109 ---------YQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQN-LTPTKWNELYPKVLGEIRKTNPSRIVIIDV 178 (320)
T ss_dssp ---------HHCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSCCCTT-SCHHHHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred ---------ccCcHHHHHHHHHHHHHHHHHHcCCCceEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCcEEEECC
Confidence 11 246789999999999999999999999999999963 467899999999999999999999999985
Q ss_pred CCCCCChhhhhccc-CCCceEEEEEeecccCCCCCCCCchhh----------------hHHHHHhhhhhhhhhhhccCCC
Q 009475 379 RLGPADHKELLSFA-SGLSRVVIDVHYYNLFSNNFNGLNVQQ----------------NIDYVNNQRASDLGAVTTSNGP 441 (534)
Q Consensus 379 ~~~~~~~~~~~~~~-~~~~nvv~d~H~Y~~f~~~~~~~~~~~----------------~i~~i~~~~~~~l~~~~~~~gp 441 (534)
...+. ...+..+. ..++|+++++|.|.||. |++.+..+ ..+.+........ .
T Consensus 179 ~~~~~-~~~~~~~~~~~~~~~v~~~H~Y~~~~--~~~~~~~w~~~~~~~~~~w~g~~~~~~~~~~~~~~~~-~------- 247 (320)
T 3nco_A 179 PNWSN-YSYVRELKLVDDKNIIVSFHYYEPFN--FTHQGAEWVSPTLPIGVKWEGKDWEVEQIRNHFKYVS-E------- 247 (320)
T ss_dssp SGGGB-GGGGGGCCCCSCTTEEEEEEECCSHH--HHTTTCTTSSSCCCSCCCCCCCHHHHHHHHHHHHHHH-H-------
T ss_pred CCcCc-hhHHhcCCCCCCCCeEEEEEecCCee--eEeccccccCCCCCCCCCCCCchhhHHHHHHHHHHHH-H-------
Confidence 42221 22232222 23789999999999865 33222111 1111111111100 0
Q ss_pred eEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccC
Q 009475 442 LTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 516 (534)
Q Consensus 442 ~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~ 516 (534)
...+++.|+++|||++... .+.+...+|++++++++++.++||+||+|+..
T Consensus 248 ---------------------~~~~~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~~~~ 298 (320)
T 3nco_A 248 ---------------------WAKKNNVPIFLGEFGAYSK---ADMESRVKWTKTVRRIAEEFGFSLAYWEFCAG 298 (320)
T ss_dssp ---------------------HHHHHTCCEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSGG
T ss_pred ---------------------HHHHcCCCEEEeeeeeecC---CCHHHHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 0111223344889887542 34567788999999999999999999999874
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=296.04 Aligned_cols=212 Identities=19% Similarity=0.254 Sum_probs=156.7
Q ss_pred ceEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEE
Q 009475 166 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 245 (534)
Q Consensus 166 ~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VR 245 (534)
.+|+++|+.+|+.+|.. |.+.|+|....|+ .....+..|... .++||+.||++|+|+||
T Consensus 4 ~~l~v~G~~~~d~~G~~----------~~l~GvN~~g~~~----------~~~~~~g~~~~~-~~~~~~~~~~~G~n~vR 62 (358)
T 1ece_A 4 GYWHTSGREILDANNVP----------VRIAGINWFGFET----------CNYVVHGLWSRD-YRSMLDQIKSLGYNTIR 62 (358)
T ss_dssp SCCEEETTEEECTTSCE----------ECCEEEECCCBTT----------TTCSCTTTTTSC-HHHHHHHHHHTTCCEEE
T ss_pred CCEEEcCCEEEcCCCCE----------EEEEEEecCCcCc----------cccCccchhhch-HHHHHHHHHHcCCCEEE
Confidence 57999999999887763 5566776433222 122334445433 38999999999999999
Q ss_pred eCcccccccCCCCCCCCCC----------chHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC--hh
Q 009475 246 IPVGWWIANDPTPPKPFVG----------GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG--DS 313 (534)
Q Consensus 246 IPv~~w~~~~~~~~~~~~~----------~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~--~~ 313 (534)
||+.|+.+.+...+..++. ..+++||++|++|.++||+||||+|+ |+++++ ...|. +.
T Consensus 63 i~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~-~~~~~~---------~~~w~~~~~ 132 (358)
T 1ece_A 63 LPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR-PDCSGQ---------SALWYTSSV 132 (358)
T ss_dssp EEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE-SBTTBC---------CSSSCCSSS
T ss_pred eeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCC-CCCCCC---------CCCCcCCCc
Confidence 9999876543221222222 38999999999999999999999998 765432 23453 45
Q ss_pred hHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-----CChHHHHHHHHHHHHHHHhcCCceEEEEeCC---------
Q 009475 314 NVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----VALDTLKSYYKAGYDAVRKYTSTAYVIMSNR--------- 379 (534)
Q Consensus 314 ~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~--------- 379 (534)
..+++.++|+.||+||+++|.|++|||+|||+... ...+.|.+++++++++||+++|+++|++++.
T Consensus 133 ~~~~~~~~~~~ia~r~~~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~dp~~~v~v~g~~~~~~~~~~ 212 (358)
T 1ece_A 133 SEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYW 212 (358)
T ss_dssp CHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECS
T ss_pred cHHHHHHHHHHHHHHhcCCCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEECCCccCCCCCCc
Confidence 68899999999999999999999999999998642 2356899999999999999999999999752
Q ss_pred CCCCChhhhhccc---CCCceEEEEEeecccCC
Q 009475 380 LGPADHKELLSFA---SGLSRVVIDVHYYNLFS 409 (534)
Q Consensus 380 ~~~~~~~~~~~~~---~~~~nvv~d~H~Y~~f~ 409 (534)
|+ .+.......+ ..++|+||++|.|.++.
T Consensus 213 w~-~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~ 244 (358)
T 1ece_A 213 WG-GNLQGAGQYPVVLNVPNRLVYSAHDYATSV 244 (358)
T ss_dssp TT-TBCTTTTTSCCCCSSSSCEEEEEECCCTTT
T ss_pred cC-CcCCcCccCCCcCCCCCceEEeeeecCCCc
Confidence 32 2222221111 12679999999999875
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=301.22 Aligned_cols=294 Identities=16% Similarity=0.200 Sum_probs=199.6
Q ss_pred EecCCceEEecccceee---cCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHH
Q 009475 161 SASNGMFIQAISETRLT---ADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS 237 (534)
Q Consensus 161 ~~~nG~~Lq~~g~~~v~---ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia 237 (534)
..+...||+++|+++|+ ++|.+ ..|.+.|+|....|+. ..+.++.|...+ +++++.||
T Consensus 34 ~~~~~~~l~v~G~~iv~~~~~~G~~--------~~v~l~GVN~~G~e~~----------~~~~~Gl~~~~~-~~~i~~ik 94 (458)
T 3qho_A 34 QTPTGIYYEVRGDTIYMINVTSGEE--------TPIHLFGVNWFGFETP----------NHVVHGLWKRNW-EDMLLQIK 94 (458)
T ss_dssp CCSSSEEEEEETTEEEEEETTTCCE--------EECCCEEEECCCTTST----------TCSCTTTTTSCH-HHHHHHHH
T ss_pred CCCCCCeEEEECCEEEEecCCCCCc--------ceEEEEEEecCccccc----------ccccCCCCCCCH-HHHHHHHH
Confidence 34567899999999999 46621 1255678775555542 223344454433 78999999
Q ss_pred hCCccEEEeCcccccccCCCCC-------CC--CCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009475 238 SNGINAVRIPVGWWIANDPTPP-------KP--FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 308 (534)
Q Consensus 238 ~~G~N~VRIPv~~w~~~~~~~~-------~~--~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~ 308 (534)
++|+|+|||||+|+.+.+...+ .| +....++.||++|++|+++||+||||+|..++.++ .+
T Consensus 95 ~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~~~~~----------~~ 164 (458)
T 3qho_A 95 SLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGCTHI----------EP 164 (458)
T ss_dssp HTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESSSSSC----------CS
T ss_pred HcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccCCCccC----------CC
Confidence 9999999999999865432111 12 12368999999999999999999999999876421 23
Q ss_pred CCC--hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-----------------CChHHHHHHHHHHHHHHHhcC
Q 009475 309 EWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----------------VALDTLKSYYKAGYDAVRKYT 369 (534)
Q Consensus 309 ~W~--~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~-----------------~~~~~~~~~~~~~~~aIR~~~ 369 (534)
.|. ....++++++|++||+|||++|.|++|||+|||+... .+...|++++++++++||+++
T Consensus 165 ~W~~~~~~~~~~~~~w~~lA~ryk~~p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~ai~aIRa~d 244 (458)
T 3qho_A 165 LWYTEDFSEEDFINTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVA 244 (458)
T ss_dssp SSCBTTBCHHHHHHHHHHHHHHHTTSTTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHHHHHHHHHC
T ss_pred ccCCchhhHHHHHHHHHHHHHHhCCCCCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhC
Confidence 565 2468899999999999999999999999999999621 234689999999999999999
Q ss_pred CceEEEEeC-CCCC----------------CChhhhhccc--CCCceEEEEEeecccCCCC---CCCC-chhhhHHHHHh
Q 009475 370 STAYVIMSN-RLGP----------------ADHKELLSFA--SGLSRVVIDVHYYNLFSNN---FNGL-NVQQNIDYVNN 426 (534)
Q Consensus 370 p~~~Iiv~~-~~~~----------------~~~~~~~~~~--~~~~nvv~d~H~Y~~f~~~---~~~~-~~~~~i~~i~~ 426 (534)
|+++|++++ .|.+ .+.......+ .+.+|+||++|.|.|.... |... ....++. .
T Consensus 245 p~~lIiv~G~~w~~~~~~~~~~~~~~~wwg~~l~~v~~~Pi~l~~~nlvYs~H~Y~~~~~~~~~~~~~~~~~~~~~---~ 321 (458)
T 3qho_A 245 PHWLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVYSPHVFGPDVYNQPYFGPAKGFPDNLP---D 321 (458)
T ss_dssp TTCEEEECCBSCCCHHHHHTSTTTTCCCTTCBCGGGTTSCCCSCTTTEEECCBCCCTTTCCCGGGSGGGTTTTTHH---H
T ss_pred CCCEEEEcCCcccCccccccccccccCcCCCCchhhhcCCCcCCCCCEEEEEEECCCCCCCCccccCccchHHHHH---H
Confidence 999999975 4432 1333333333 2358999999999874311 1000 0011111 1
Q ss_pred hhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCC
Q 009475 427 QRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATF 506 (534)
Q Consensus 427 ~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~ 506 (534)
........+ +..+..++++|||++.... ..+.. -.+|+++.++.+++.++
T Consensus 322 ~w~~~~g~l----------------------------~~~~~~Pl~igEfG~~~~~-g~~~~-~~~w~~~~~~yl~~~~i 371 (458)
T 3qho_A 322 IWYHHFGYV----------------------------KLELGYSVVIGEFGGKYGH-GGDPR-DVIWQNKLVDWMIENKF 371 (458)
T ss_dssp HHHHHTTHH----------------------------HHTTCCCBCBCBCCCCTTS-SSCTH-HHHHHHHHHHHHHHTTC
T ss_pred HHHhhhhhH----------------------------hhcCCCcEEEEecCCCcCC-CCCcc-hHHHHHHHHHHHHhcCC
Confidence 111111111 1122344558999875422 12222 25799999999999986
Q ss_pred -cEEEEccccC
Q 009475 507 -GWAYWAHKCE 516 (534)
Q Consensus 507 -GW~fWt~K~~ 516 (534)
+|+||++..+
T Consensus 372 ~~w~~W~~np~ 382 (458)
T 3qho_A 372 CDFFYWSWNPD 382 (458)
T ss_dssp CCEEESCSSSC
T ss_pred CCEEEEecCCC
Confidence 8999999865
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=285.19 Aligned_cols=258 Identities=17% Similarity=0.159 Sum_probs=181.7
Q ss_pred eeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHH
Q 009475 193 FKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDN 272 (534)
Q Consensus 193 F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~ 272 (534)
|.+.|+|..+.|+..+..-| .++.+| +|+|++||+.||++|+|+|||||.|..+.++.++.+++++.+++||+
T Consensus 4 ~~~~GvN~~G~~~~~~~~~g------~~~~~~-~~~~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~ 76 (305)
T 1h1n_A 4 FQWFGSNESGAEFGSQNLPG------VEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIA 76 (305)
T ss_dssp SSEEEEEECCTTCSTTSSSC------CBTTTB-CCCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHH
T ss_pred ceEEEEeccccccCCCCCCC------cccccC-CCCCHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHH
Confidence 44567775555654322112 234445 68899999999999999999999965433324445778889999999
Q ss_pred HHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChH
Q 009475 273 AFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALD 352 (534)
Q Consensus 273 ~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~ 352 (534)
+|++|.++||+||||+|+.++. + |.. ....+++.++|++||+||+++|.| +|||+|||+.. +.+
T Consensus 77 ~v~~~~~~gi~vild~h~~~~~-~-----g~~-------~~~~~~~~~~~~~ia~~~~~~~~V-~~~l~NEP~~~--~~~ 140 (305)
T 1h1n_A 77 TVNAITQKGAYAVVDPHNYGRY-Y-----NSI-------ISSPSDFETFWKTVASQFASNPLV-IFDTDNEYHDM--DQT 140 (305)
T ss_dssp HHHHHHHTTCEEEEEECCTTEE-T-----TEE-------CCCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCCSS--CHH
T ss_pred HHHHHHHCCCEEEEeccccccc-c-----CCc-------CCcHHHHHHHHHHHHHHhCCCCeE-EEeccCCCCCC--CHH
Confidence 9999999999999999998632 1 111 123789999999999999999998 89999999963 678
Q ss_pred HHHHHHHHHHHHHHhcCC-ceEEEEeC-CCCCC-Ch----hhhhcccCCCceEEEEEeecccCCCCCCCC---ch---hh
Q 009475 353 TLKSYYKAGYDAVRKYTS-TAYVIMSN-RLGPA-DH----KELLSFASGLSRVVIDVHYYNLFSNNFNGL---NV---QQ 419 (534)
Q Consensus 353 ~~~~~~~~~~~aIR~~~p-~~~Iiv~~-~~~~~-~~----~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~---~~---~~ 419 (534)
.|++++++++++||++++ +++|++++ .|.+. .+ ..+..+..+.+|+||++|+|.|+.....+. .. .+
T Consensus 141 ~w~~~~~~~~~~IR~~~~~~~~I~v~g~~~~~~~~~~~~~~~~~~~~~p~~~~v~s~H~Y~~~~~~g~~~~~~~~~~~~~ 220 (305)
T 1h1n_A 141 LVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTNVNDNMKSLTDPSDKIIYEMHQYLDSDGSGTSATCVSSTIGQE 220 (305)
T ss_dssp HHHHHHHHHHHHHHHTTCCSSCEEEECTGGGBSTTHHHHSGGGGGCCCTTCCEEEEEEEECSTTSSSCCSCCSCTTHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEccccccCcccccccCcccccCcCCCCCEEEEEEEcCCCCCcCCCCCccCcchHHH
Confidence 999999999999999998 99999974 44321 11 112233334579999999999875211111 00 11
Q ss_pred hHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHH
Q 009475 420 NIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLD 499 (534)
Q Consensus 420 ~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~ 499 (534)
.++..+. .+.+ ++.+++ ||||++.. + +...+|++++++
T Consensus 221 ~~~~~~~-------~~~~-~g~Pv~----------------------------igEfG~~~-----~-~~~~~~~~~~~~ 258 (305)
T 1h1n_A 221 RITSATQ-------WLRA-NGKKGI----------------------------IGEFAGGA-----D-NVCETAITGMLD 258 (305)
T ss_dssp HHHHHHH-------HHHH-TTCCEE----------------------------EEEEECCS-----S-HHHHHHHHHHHH
T ss_pred HHHHHHH-------HHHH-cCCcEE----------------------------EEeccCCC-----C-hHHHHHHHHHHH
Confidence 1111111 1111 232344 78887643 1 456789999999
Q ss_pred HHhcCC---CcEEEEcccc
Q 009475 500 VYGRAT---FGWAYWAHKC 515 (534)
Q Consensus 500 ~~e~~~---~GW~fWt~K~ 515 (534)
.+++.+ +||++|+++.
T Consensus 259 ~~~~~~~~~ig~~~W~~g~ 277 (305)
T 1h1n_A 259 YMAQNTDVWTGAIWWAAGP 277 (305)
T ss_dssp HHHTCTTTEEEEEEEEECT
T ss_pred HHHHcCCeeEEEEEECCCC
Confidence 999999 9999999754
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-33 Score=291.33 Aligned_cols=262 Identities=16% Similarity=0.190 Sum_probs=181.0
Q ss_pred cccCCCcchhhhhhccC-CCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEE
Q 009475 209 NGFGPDKAPQVLQDHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD 287 (534)
Q Consensus 209 ~~~G~~~a~~~~~~hw~-~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlD 287 (534)
+++|.++.....+.||. ++++++||+.||++|+|+|||||+|..+..+.++..++++.+++||++|++|+++||+||||
T Consensus 43 ~w~~~~~~~~~~e~~W~~~~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vild 122 (376)
T 3ayr_A 43 EYLNYEKDQTASETCWGNPKTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILN 122 (376)
T ss_dssp TTSCGGGCTTGGGGTTSCCCCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred ccccccCCCCCCCCccCCCcCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 34455555667889996 58999999999999999999999987555434444567778999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC----------ChHHHHHH
Q 009475 288 LHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLKSY 357 (534)
Q Consensus 288 lH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~----------~~~~~~~~ 357 (534)
+|+.+.... .+ +. .+...+.+.++|++||+||++++.+++|||+|||+.... +.+.+++|
T Consensus 123 lH~~~~~~~----~~---~~---~~~~~~~~~~~w~~ia~~~~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~ 192 (376)
T 3ayr_A 123 LHHETWNHA----FS---ET---LDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAM 192 (376)
T ss_dssp CCSCSSCCS----CT---TT---HHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSCCCCTTSTTTTTTCCHHHHHHHHHH
T ss_pred CCCcccccc----cc---cc---hHHHHHHHHHHHHHHHHHHcCCCceeeEEeecCCCcCCCccccCCccHHHHHHHHHH
Confidence 999753110 01 00 145678899999999999999999899999999997421 12357789
Q ss_pred HHHHHHHHHhcC---CceEEEEeCCCCCCChhhhhcc--cCCCceEEEEEeecccCCCCCCCC--------chhhhHHHH
Q 009475 358 YKAGYDAVRKYT---STAYVIMSNRLGPADHKELLSF--ASGLSRVVIDVHYYNLFSNNFNGL--------NVQQNIDYV 424 (534)
Q Consensus 358 ~~~~~~aIR~~~---p~~~Iiv~~~~~~~~~~~~~~~--~~~~~nvv~d~H~Y~~f~~~~~~~--------~~~~~i~~i 424 (534)
+++++++||+++ |+++|++++...+.+...+..+ +..++|+||++|+|.|+. |++. ..+...+.+
T Consensus 193 ~~~~~~aIR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~~~~n~v~s~H~Y~~~~--~~~~~~~~~~~~~~~~~~~~~ 270 (376)
T 3ayr_A 193 NAVFLKTVRSAGGNNPKRHLMIPPYAAACNENSFNNFIFPEDDDKVIASVHAYAPYN--FALNNGEGAVDKFDAAGKRDL 270 (376)
T ss_dssp HHHHHHHHHTSSTTGGGCCEEECCGGGBCSHHHHHTCCCCTTCTTEEEEEECCCSHH--HHTCCSTTCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcEEEECCCccCccccccccccCCCCCCCEEEEEeecCchh--ccccCCCCcccccChhhhhHH
Confidence 999999999995 4578888753222222233333 233589999999999964 2211 001111111
Q ss_pred HhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcC
Q 009475 425 NNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRA 504 (534)
Q Consensus 425 ~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~ 504 (534)
..........+.+. +.+++ ||||++... .+.+...+|+++.++.+++.
T Consensus 271 ~~~~~~~~~~~~~~-g~Pv~----------------------------igEfG~~~~---~~~~~~~~w~~~~~~~~~~~ 318 (376)
T 3ayr_A 271 EWNINLMKKRFVDQ-GIPMI----------------------------LGEYGAMNR---DNEEDRATWAEFYMEKVTAM 318 (376)
T ss_dssp HHHHHHHHHHTGGG-TCCEE----------------------------EEEECCCCS---SCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHc-CCcEE----------------------------EEccccCCC---CCcHHHHHHHHHHHHHHHHC
Confidence 11111000011111 22233 788887542 23556788999999999999
Q ss_pred CCcEEEEccc
Q 009475 505 TFGWAYWAHK 514 (534)
Q Consensus 505 ~~GW~fWt~K 514 (534)
++||+||++.
T Consensus 319 ~ig~~~W~~g 328 (376)
T 3ayr_A 319 GVPQIWWDNG 328 (376)
T ss_dssp TCCEEEEECS
T ss_pred CCcEEEECCC
Confidence 9999999974
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=285.17 Aligned_cols=246 Identities=19% Similarity=0.327 Sum_probs=178.8
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
++||.++++++||+.||++|+|+||||+.|+.+.++..+..+++..++++|++|++|+++||+||||+|+.++.++
T Consensus 27 ~~~w~~~~~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~~~~~~---- 102 (317)
T 3aof_A 27 EGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMN---- 102 (317)
T ss_dssp TTTTSCCCCTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHH----
T ss_pred CCcCCCCCCHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCCccccC----
Confidence 5789999999999999999999999999987665433333455678999999999999999999999998764321
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC-C
Q 009475 301 SATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN-R 379 (534)
Q Consensus 301 sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~ 379 (534)
. .+...+++.++|+.||+||+++|.|++|||+|||.. ..+.+.|.+++++++++||+++|+++|++++ .
T Consensus 103 ------~---~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~-~~~~~~~~~~~~~~~~~iR~~~p~~~i~v~~~~ 172 (317)
T 3aof_A 103 ------D---PEEHKERFLALWKQIADRYKDYPETLFFEILNAPHG-NLTPEKWNELLEEALKVIRSIDKKHTIIIGTAE 172 (317)
T ss_dssp ------C---HHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSSCCT-TSCHHHHHHHHHHHHHHHHHHCSSSCEEECCSG
T ss_pred ------C---cHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCEEEECCCC
Confidence 0 035678999999999999999999999999999996 3467899999999999999999999999975 3
Q ss_pred CCCCChhhhhcc--cCCCceEEEEEeecccCCCCCCCCchhh----------------hHHHHHhhhhhhhhhhhccCCC
Q 009475 380 LGPADHKELLSF--ASGLSRVVIDVHYYNLFSNNFNGLNVQQ----------------NIDYVNNQRASDLGAVTTSNGP 441 (534)
Q Consensus 380 ~~~~~~~~~~~~--~~~~~nvv~d~H~Y~~f~~~~~~~~~~~----------------~i~~i~~~~~~~l~~~~~~~gp 441 (534)
|... ..+..+ +..++|+++++|.|.|+. |++....+ ..+.+...........
T Consensus 173 ~~~~--~~~~~~~~p~~~~~~v~~~H~Y~~~~--~~~~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------ 242 (317)
T 3aof_A 173 WGGI--SALEKLSVPKWEKNSIVTIHYYNPFE--FTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWS------ 242 (317)
T ss_dssp GGSS--TTGGGCCCCTTCCSEEEEEECCCSHH--HHTTTCTTSTTGGGGTTCCCCCHHHHHHHHHHHHHHHHHH------
T ss_pred cCcH--hHHhhCcCCCCCCCEEEEEeccCCcc--cccCCCCCcCcccccCCcCcCcHHHHHHHHHHHHHHHHHH------
Confidence 4321 122222 223579999999998864 22221111 0011111110000000
Q ss_pred eEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccC
Q 009475 442 LTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 516 (534)
Q Consensus 442 ~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~ 516 (534)
.+.+.++++|||++... .+.+...+|++++++++++.++||+||+|+..
T Consensus 243 -----------------------~~~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 291 (317)
T 3aof_A 243 -----------------------KKNKRPIYIGEFGAYRK---ADLESRIKWTSFVVREMEKRRWSLAYWEFCSG 291 (317)
T ss_dssp -----------------------HHHTCCEEEEECCCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSST
T ss_pred -----------------------HHcCCCEEEeeccccCC---CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 11122334788876432 34566778999999999999999999999864
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=284.34 Aligned_cols=257 Identities=18% Similarity=0.252 Sum_probs=180.5
Q ss_pred ceEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHH-hCCccEE
Q 009475 166 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAV 244 (534)
Q Consensus 166 ~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~V 244 (534)
..|+++|+.+++.+|.. |.+.|++.. + ..++.++++++||+.|+ ++|+|+|
T Consensus 10 g~l~v~G~~l~d~nG~~----------v~lrGvn~~----------~--------~~~~~~~~~~~~~~~l~~~~G~N~V 61 (303)
T 7a3h_A 10 GQLSISNGELVNERGEQ----------VQLKGMSSH----------G--------LQWYGQFVNYESMKWLRDDWGINVF 61 (303)
T ss_dssp CSCEEETTEEECTTSCB----------CCCEEEEES----------C--------HHHHGGGCSHHHHHHHHHHTCCCEE
T ss_pred CeEEEeCCEEECCCCCE----------EEEEEeccC----------c--------cccccccCCHHHHHHHHHhcCCCEE
Confidence 46899999999887764 445676532 1 12355788999999998 7999999
Q ss_pred EeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH
Q 009475 245 RIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDF 324 (534)
Q Consensus 245 RIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~ 324 (534)
|||+.+. .++...++..+++||++|++|.++||+||||+|..++++. ....+++.++|+.
T Consensus 62 Rip~~~~-----~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~---------------~~~~~~~~~~w~~ 121 (303)
T 7a3h_A 62 RAAMYTS-----SGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP---------------NIYKEEAKDFFDE 121 (303)
T ss_dssp EEEEESS-----TTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHHHH
T ss_pred EEEEEeC-----CCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecccCCCCc---------------hHHHHHHHHHHHH
Confidence 9999762 1122234568999999999999999999999999886421 1346789999999
Q ss_pred HHHHhcCCCeEEEEEeccCCCCCCCCh-HHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhcccCCCceEEEEEe
Q 009475 325 LAARYANRPSLAAIELINEPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 403 (534)
Q Consensus 325 lA~ryk~~~~vlg~eL~NEP~~~~~~~-~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~~~~~~nvv~d~H 403 (534)
||+||+++|.|+ |||+|||+...... +.++.++++++++||+++|+++|++++...+.++..+...+..++|++|++|
T Consensus 122 ia~r~~~~~~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w~~~~~~~~~~p~~~~n~v~s~H 200 (303)
T 7a3h_A 122 MSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYAFH 200 (303)
T ss_dssp HHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBHHHHHTSCCSCTTEEEEEE
T ss_pred HHHHhCCCCeEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCcccchhhHhhCCCCCCCEEEEEE
Confidence 999999999999 99999999743332 3788999999999999999999999753222344444333335789999999
Q ss_pred ecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCC
Q 009475 404 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVK 483 (534)
Q Consensus 404 ~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~ 483 (534)
+|.+.. .+. +... +..+.+ .+.+++ +|||+......
T Consensus 201 ~Y~~~~--------~~~---~~~~----~~~~~~-~g~P~~----------------------------igEfG~~~~~~ 236 (303)
T 7a3h_A 201 FYAGTH--------GQN---LRDQ----VDYALD-QGAAIF----------------------------VSEWGTSAATG 236 (303)
T ss_dssp EETTSC--------CHH---HHHH----HHHHHH-TTCCEE----------------------------EEEEESSCTTS
T ss_pred ecCCCc--------hHH---HHHH----HHHHHH-cCCCEE----------------------------EECCCCCCCCC
Confidence 996421 111 1111 111111 232355 45555432110
Q ss_pred cccHHHHHHHHHHHHHHHhcCCCcEEEEccccCC
Q 009475 484 DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 517 (534)
Q Consensus 484 ~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~ 517 (534)
.. ....+++++.++.+++.++||++|+|+..+
T Consensus 237 ~g--~~~~~~~~~~l~~~~~~~i~w~~W~~~~~~ 268 (303)
T 7a3h_A 237 DG--GVFLDEAQVWIDFMDERNLSWANWSLTHKD 268 (303)
T ss_dssp CS--CCCHHHHHHHHHHHHHTTCCEEEEEESCCS
T ss_pred CC--cccHHHHHHHHHHHHhcCCceEEEEecCCC
Confidence 00 011345667778888899999999998843
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-32 Score=281.87 Aligned_cols=235 Identities=18% Similarity=0.251 Sum_probs=165.5
Q ss_pred CHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 308 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~ 308 (534)
|++.++.|+++|+|+|||||.|+.+.+...+.++++.++++||++|++|.++||+||||+|+.++. ++.. .+.
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~~-~g~~-----~~~- 117 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYARW-NGGI-----IGQ- 117 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTEE-TTEE-----TTT-
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCccc-CCcc-----cCC-
Confidence 577788999999999999999876554334457788899999999999999999999999999852 2211 010
Q ss_pred CCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCc-eEEEEeC-CCCCC-Ch
Q 009475 309 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST-AYVIMSN-RLGPA-DH 385 (534)
Q Consensus 309 ~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~Iiv~~-~~~~~-~~ 385 (534)
.+...++++++|++||+|||++|.|+ |||+|||+.. +.+.|++++++++++||+++|+ ++|++++ .|.+. .+
T Consensus 118 --~~~~~~~~~~~w~~iA~ryk~~~~Vi-~el~NEP~~~--~~~~w~~~~~~~i~aIR~~~~~~~~Iiv~g~~w~~~~~w 192 (340)
T 3qr3_A 118 --GGPTNAQFTSLWSQLASKYASQSRVW-FGIMNEPHDV--NINTWAATVQEVVTAIRNAGATSQFISLPGNDWQSAGAF 192 (340)
T ss_dssp --TSSCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECSGGGBTTTT
T ss_pred --CHHHHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCCC--CHHHHHHHHHHHHHHHHhhCCCccEEEEeCCcccccccc
Confidence 02468899999999999999999997 9999999963 5789999999999999999999 7999975 34321 11
Q ss_pred ------hhhhcccCC---CceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhh
Q 009475 386 ------KELLSFASG---LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICK 456 (534)
Q Consensus 386 ------~~~~~~~~~---~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~ 456 (534)
..+..+..+ ++|+||++|+|.|++ |.+...++....+..........+ +.++.++|
T Consensus 193 ~~~~~~~~l~~l~dP~~~~~nlvys~H~Y~~~~--~sgt~~~~~~~~i~~~~~~~~~~~-~~~g~pv~------------ 257 (340)
T 3qr3_A 193 ISDGSAAALSQVTNPDGSTTNLIFDVHKYLDSD--NSGTHAECTTNNIDGAFSPLATWL-RQNNRQAI------------ 257 (340)
T ss_dssp TTTSHHHHHTTCCCTTSCCTTEEEEEECCCSTT--SSSCSSSCCCCSTTTTHHHHHHHH-HHTTCCEE------------
T ss_pred cccccchhhcccCCCCCCCCCEEEEEEeCCCCC--CCCCCcccchhhHHHHHHHHHHHH-HHcCCcEE------------
Confidence 112223233 489999999999986 333322211000000000000001 12333344
Q ss_pred hhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCC---CcEEEEc
Q 009475 457 RCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRAT---FGWAYWA 512 (534)
Q Consensus 457 ~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~---~GW~fWt 512 (534)
||||+..- .+...++++++++.+++++ +||++|.
T Consensus 258 ----------------iGEfG~~~------~~~~~~~~~~~l~~~~~~~~~~~gw~~W~ 294 (340)
T 3qr3_A 258 ----------------LTETGGGN------VQSCIQDMCQQIQYLNQNSDVYLGYVGWG 294 (340)
T ss_dssp ----------------EEEECCCS------SHHHHHHHHHHHHHHHTTTTTEEEEEEEE
T ss_pred ----------------EeCccCCC------ChHHHHHHHHHHHHHHHcCCcceEEEEec
Confidence 78887631 2456789999999999988 5666664
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.98 E-value=6.3e-32 Score=283.81 Aligned_cols=251 Identities=17% Similarity=0.232 Sum_probs=172.7
Q ss_pred hhhcc-CCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 220 LQDHW-DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 220 ~~~hw-~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
++.+| +.+++++||+.||++|+|+|||||.|+.+.. .++..++++.+++||++|++|+++||+||||+|+.++...+.
T Consensus 53 ~e~~W~~~~~~~~di~~i~~~G~n~vRipv~w~~~~~-~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~~~w~~~~ 131 (380)
T 1edg_A 53 YETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVS-GSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGY 131 (380)
T ss_dssp HHHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEE-TTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSB
T ss_pred ccCcCCCCcccHHHHHHHHHcCCCEEEecccHHhhcC-CCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchhhhcCC
Confidence 35567 4468999999999999999999999876543 333456677899999999999999999999999998653321
Q ss_pred CCCCCCCCCCCCC-hhhHHHH-HHHHHHHHHHhcCCCeEEEEEeccCCCCCCC--Ch-------------HHHHHHHHHH
Q 009475 299 EHSATRDGFQEWG-DSNVADT-VAVIDFLAARYANRPSLAAIELINEPLAPGV--AL-------------DTLKSYYKAG 361 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~-~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~--~~-------------~~~~~~~~~~ 361 (534)
.+.+. +...+++ .++|++||+|||++|.+++|||+|||+.... .. +.+++|++++
T Consensus 132 --------~~~~~~~~~~~~~~~~~w~~ia~~~~~~~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~~~~~l~~~~~~~ 203 (380)
T 1edg_A 132 --------FPSSQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDF 203 (380)
T ss_dssp --------CSSGGGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred --------CCccccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEecCCCCcCCCCcccccccCCCchHHHHHHHHHHHHHH
Confidence 11222 4567889 9999999999999999999999999986421 11 5678999999
Q ss_pred HHHHHhcC---CceEEEEeCCCCCCChhhhhccc-CCC-----ceEEEEEeecccCCCCCCCCchh------------hh
Q 009475 362 YDAVRKYT---STAYVIMSNRLGPADHKELLSFA-SGL-----SRVVIDVHYYNLFSNNFNGLNVQ------------QN 420 (534)
Q Consensus 362 ~~aIR~~~---p~~~Iiv~~~~~~~~~~~~~~~~-~~~-----~nvv~d~H~Y~~f~~~~~~~~~~------------~~ 420 (534)
+++||+++ |+++|++++...+.+...+..+. +.+ +|+||++|+|.|+. |++.... ..
T Consensus 204 ~~~IR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~d~~~~~~n~v~s~H~Y~~~~--f~~~~~~~~g~~~w~~~~~~~ 281 (380)
T 1edg_A 204 VNTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWN--FAGLAMADGGTNAWNINDSKD 281 (380)
T ss_dssp HHHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHH--HHTSCGGGTCCCCCCTTCHHH
T ss_pred HHHHHhcCCCCCCceEEECCCcCCccccccccccCCCCCccccCcEEEEEeecCCcc--cccccccCCCCCccCCCchhh
Confidence 99999995 88899997522111212222222 122 39999999999864 2222110 00
Q ss_pred HHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHH
Q 009475 421 IDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDV 500 (534)
Q Consensus 421 i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~ 500 (534)
.+.+..........+.+. + .|++||||++... .+.+...+|++++++.
T Consensus 282 ~~~i~~~~~~~~~~~~~~-g----------------------------~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~ 329 (380)
T 1edg_A 282 QSEVTWFMDNIYNKYTSR-G----------------------------IPVIIGECGAVDK---NNLKTRVEYMSYYVAQ 329 (380)
T ss_dssp HHHHHHHHHHHHHHTGGG-T----------------------------CCEEEEEECCCCS---SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-C----------------------------CCEEEEeccCCCC---CChHHHHHHHHHHHHH
Confidence 011111111000011111 2 2333788876542 2345677899999999
Q ss_pred HhcCCCcEEEEcc
Q 009475 501 YGRATFGWAYWAH 513 (534)
Q Consensus 501 ~e~~~~GW~fWt~ 513 (534)
+++.++||+||++
T Consensus 330 ~~~~gig~~~W~~ 342 (380)
T 1edg_A 330 AKARGILCILWDN 342 (380)
T ss_dssp HHHTTCEEEECCC
T ss_pred HHHCCCceEEECC
Confidence 9999999999995
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.9e-32 Score=283.97 Aligned_cols=193 Identities=17% Similarity=0.215 Sum_probs=142.9
Q ss_pred ceEEeccc-ceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHH-hCCccE
Q 009475 166 MFIQAISE-TRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINA 243 (534)
Q Consensus 166 ~~Lq~~g~-~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~ 243 (534)
.+|+++|. .+|+++|.. |.+.|++....+| ...+++++||+.|+ ++|+|+
T Consensus 19 ~~~~v~G~~~lvd~~G~~----------~~lrGvn~~~~~~------------------~~~~~~~~d~~~l~~~~G~N~ 70 (364)
T 1g01_A 19 QLVELNGQLTLAGEDGTP----------VQLRGMSTHGLQW------------------FGEIVNENAFVALSNDWGSNM 70 (364)
T ss_dssp EEEEETTEEEEECTTSCB----------CCCEEEEESCHHH------------------HGGGCSHHHHHHHHTTSCCSE
T ss_pred CcEEecCCeeEECCCCCE----------EEEEEEecCcccc------------------cCCccCHHHHHHHHHHCCCCE
Confidence 57888888 788877663 4456765321111 12467899999996 999999
Q ss_pred EEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCC-CCCCCCCCCCCCCCCCCCCChhhHHHHHHHH
Q 009475 244 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQEWGDSNVADTVAVI 322 (534)
Q Consensus 244 VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~-pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w 322 (534)
||||+.|- .++.++++..+++||++|++|.++||+||||+|.. ||.+++ ...+++.++|
T Consensus 71 VRip~~~~-----~~~~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~~~~g~~~~---------------~~~~~~~~~w 130 (364)
T 1g01_A 71 IRLAMYIG-----ENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRA---------------DVYSGAYDFF 130 (364)
T ss_dssp EEEEEESS-----SSSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTS---------------GGGTTHHHHH
T ss_pred EEEEeeeC-----CCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCCCh---------------HHHHHHHHHH
Confidence 99999861 22345677899999999999999999999999984 554321 1124578999
Q ss_pred HHHHHHhc---CCCeEEEEEeccCCCCCC-----C--Ch---HHHHHHHHHHHHHHHhcCCceEEEEeC-CCCCCChhhh
Q 009475 323 DFLAARYA---NRPSLAAIELINEPLAPG-----V--AL---DTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPADHKEL 388 (534)
Q Consensus 323 ~~lA~ryk---~~~~vlg~eL~NEP~~~~-----~--~~---~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~~~~~~~ 388 (534)
++||+||+ ++|.|+ |||+|||+... . +. +.|++|+++++++||+++ +++|++++ .|+ .+....
T Consensus 131 ~~ia~~y~~~~~~~~Vi-~el~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~~-~~~I~v~~~~w~-~~~~~~ 207 (364)
T 1g01_A 131 EEIADHYKDHPKNHYII-WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG-DNMILVGNPNWS-QRPDLS 207 (364)
T ss_dssp HHHHHHHTTCTTGGGEE-EECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCHHHH-TCHHHH
T ss_pred HHHHHHhhccCCCCeEE-EEcCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcEEEECCCCcc-cccchh
Confidence 99999999 778997 99999998631 1 12 467889999999999999 99999975 333 232222
Q ss_pred hcccCCCceEEEEEeecccCC
Q 009475 389 LSFASGLSRVVIDVHYYNLFS 409 (534)
Q Consensus 389 ~~~~~~~~nvv~d~H~Y~~f~ 409 (534)
...+..++|+||++|+|.++.
T Consensus 208 ~~~p~~~~niv~s~H~Y~~~~ 228 (364)
T 1g01_A 208 ADNPIDAENIMYSVHFYTGSH 228 (364)
T ss_dssp HHSCCSSSSEEEEEEEETTTS
T ss_pred hcCCCCCCCEEEEEEecCCcc
Confidence 222234689999999999864
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=267.90 Aligned_cols=243 Identities=15% Similarity=0.225 Sum_probs=172.5
Q ss_pred EEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeC
Q 009475 168 IQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 247 (534)
Q Consensus 168 Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIP 247 (534)
|+++|+.+|+++|.. |.+.|+|. ... |..-.+++||+.||++|+|+||||
T Consensus 2 l~v~G~~i~d~~G~~----------~~lrGvn~-~~~-------------------w~~~~~~~~~~~i~~~G~N~VRi~ 51 (294)
T 2whl_A 2 FSVDGNTLYDANGQP----------FVMRGINH-GHA-------------------WYKDTASTAIPAIAEQGANTIRIV 51 (294)
T ss_dssp CEEETTEEECTTSCB----------CCCEEEEE-CGG-------------------GCGGGHHHHHHHHHHTTCSEEEEE
T ss_pred eEEECCEEECCCCCE----------EEEEEeec-ccc-------------------cCCcchHHHHHHHHHcCCCEEEEE
Confidence 678899998877763 44567662 111 211126899999999999999999
Q ss_pred cccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009475 248 VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 327 (534)
Q Consensus 248 v~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ 327 (534)
++. +.+|.+..+++||++|++|.++||+||||+|..++.++ ....+++.++|++||+
T Consensus 52 ~~~--------~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~---------------~~~~~~~~~~w~~ia~ 108 (294)
T 2whl_A 52 LSD--------GGQWEKDDIDTIREVIELAEQNKMVAVVEVHDATGRDS---------------RSDLNRAVDYWIEMKD 108 (294)
T ss_dssp ECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCC---------------HHHHHHHHHHHHHTHH
T ss_pred ecC--------CCccCccHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc---------------chhHHHHHHHHHHHHH
Confidence 972 12455568999999999999999999999999876432 1467899999999999
Q ss_pred HhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC-CCCCCChh-------hhhcccCCCceEE
Q 009475 328 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPADHK-------ELLSFASGLSRVV 399 (534)
Q Consensus 328 ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~~~~~-------~~~~~~~~~~nvv 399 (534)
||++++..++|||+|||+.. .+.+.|.++|++++++||+++|+++|++++ .|.. ... .++ ..++.+|++
T Consensus 109 ~y~~~~~~v~~el~NEP~~~-~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~-~~~~~~~~~~~~~-~~d~~~n~v 185 (294)
T 2whl_A 109 ALIGKEDTVIINIANEWYGS-WDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQ-YPQSIHDYGQDVF-NADPLKNTM 185 (294)
T ss_dssp HHTTCTTTEEEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTT-BTHHHHHHHHHHH-HTCTTCCEE
T ss_pred HHcCCCCeEEEEecCCCCCC-CChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCC-Cchhhhhhhhccc-cCCCcCCEE
Confidence 99999433369999999963 456689999999999999999999999985 3432 211 111 123457999
Q ss_pred EEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccc
Q 009475 400 IDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCE 479 (534)
Q Consensus 400 ~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~ 479 (534)
|++|.|.|+.. . .+.++ .. +..+.+. +.+++ ||||++.
T Consensus 186 ~s~H~Y~~~~~-----~-~~~~~---~~----~~~~~~~-~~Pv~----------------------------igEfG~~ 223 (294)
T 2whl_A 186 FSIHMYEYAGG-----D-ANTVR---SN----IDRVIDQ-DLALV----------------------------IGEFGHR 223 (294)
T ss_dssp EEEEESTTTTS-----S-HHHHH---HH----HHHHHTT-TCCEE----------------------------EEEECCC
T ss_pred EEEEeccCCCC-----c-HHHHH---HH----HHHHHHC-CCCEE----------------------------EEccCCC
Confidence 99999976541 1 11121 11 1112222 33345 6777664
Q ss_pred cCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccCC
Q 009475 480 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 517 (534)
Q Consensus 480 ~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~ 517 (534)
.. . .+.+++++.+++.++||++|+|+..+
T Consensus 224 ~~--~-------~~~~~~~~~~~~~~i~w~~W~~~~~~ 252 (294)
T 2whl_A 224 HT--D-------VDEDTILSYSEETGTGWLAWSWKGNS 252 (294)
T ss_dssp CC--C-------CCHHHHHHHHHHHTCEEEESCSSCCC
T ss_pred CC--C-------ccHHHHHHHHHHcCCeEEEEEecCCC
Confidence 43 1 12467778888889999999999865
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=273.59 Aligned_cols=258 Identities=17% Similarity=0.218 Sum_probs=180.3
Q ss_pred CceEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHH-HhCCccE
Q 009475 165 GMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFL-SSNGINA 243 (534)
Q Consensus 165 G~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~i-a~~G~N~ 243 (534)
..+|+++|+.+++.+|.. |.++|++.... .++..+++++|++.| +++|+|+
T Consensus 34 ~g~l~v~G~~l~d~nG~~----------v~l~Gvn~h~~------------------~~~~~~~~~~~~~~l~~~~G~N~ 85 (327)
T 3pzt_A 34 NGQLSIKGTQLVNRDGKA----------VQLKGISSHGL------------------QWYGEYVNKDSLKWLRDDWGITV 85 (327)
T ss_dssp CCSCEEETTEEECTTSCB----------CCCEEEEESCH------------------HHHGGGCSHHHHHHHHHHTCCSE
T ss_pred CCcEEEeCCEEECCCCCE----------EEEEEEcCCch------------------hhcCCCCCHHHHHHHHHhcCCCE
Confidence 357899999999887764 44667653211 234557899999999 6899999
Q ss_pred EEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHH
Q 009475 244 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 323 (534)
Q Consensus 244 VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~ 323 (534)
||||+.+. .++...++..++.||++|++|.++|||||||+|..++++. ....+++.++|+
T Consensus 86 VRi~~~~~-----~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~~~~~---------------~~~~~~~~~~w~ 145 (327)
T 3pzt_A 86 FRAAMYTA-----DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWHILNDGNP---------------NQNKEKAKEFFK 145 (327)
T ss_dssp EEEEEESS-----TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHHH
T ss_pred EEEEeEEC-----CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc---------------hHHHHHHHHHHH
Confidence 99999531 1222235678999999999999999999999999876421 134678999999
Q ss_pred HHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhcccCCCceEEEEEe
Q 009475 324 FLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 403 (534)
Q Consensus 324 ~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~~~~~~nvv~d~H 403 (534)
.||+|||++|.|+ |||+|||.....-.+.+.+++++++++||+++|+++|++++...+.++..+...+..++|++|++|
T Consensus 146 ~~a~r~k~~p~Vi-~el~NEp~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w~~~~~~~~~~~~~~~n~v~s~H 224 (327)
T 3pzt_A 146 EMSSLYGNTPNVI-YEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVNDAADDQLKDANVMYALH 224 (327)
T ss_dssp HHHHHHTTCTTEE-EECCSCCCSSCCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHHHHHTSCCCCTTEEEEEE
T ss_pred HHHHHhCCCCcEE-EEeccCCCCCcccHHHHHHHHHHHHHHHHhhCCCCEEEEeCCcccccchhhhhCCCCCCCeEEEEE
Confidence 9999999999999 999999986322235799999999999999999999999864222344444333345689999999
Q ss_pred ecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCC
Q 009475 404 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVK 483 (534)
Q Consensus 404 ~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~ 483 (534)
.|.+.. .+.+. ... ..+.. ++.++| +|||+......
T Consensus 225 ~Y~~~~--------~~~~~---~~~----~~~~~-~g~Pv~----------------------------igEfG~~~~~g 260 (327)
T 3pzt_A 225 FYAGTH--------GQFLR---DKA----NYALS-KGAPIF----------------------------VTEWGTSDASG 260 (327)
T ss_dssp EETTTC--------CHHHH---HHH----HHHHH-TTCCEE----------------------------EEEEESSCTTS
T ss_pred ecCCCc--------hHHHH---HHH----HHHHH-cCCcEE----------------------------EEccCCCCCCC
Confidence 996521 11111 111 11112 233455 45554322110
Q ss_pred cccHHHHHHHHHHHHHHHhcCCCcEEEEccccCC
Q 009475 484 DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 517 (534)
Q Consensus 484 ~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~ 517 (534)
.. .....++++.++.+++.++||++|+|+..+
T Consensus 261 ~g--~~~~~~~~~~l~~~~~~~i~w~~W~~~d~~ 292 (327)
T 3pzt_A 261 NG--GVFLDQSREWLKYLDSKTISWVNWNLSDKQ 292 (327)
T ss_dssp CS--CCCHHHHHHHHHHHHHTTCCEEEEEESCCS
T ss_pred CC--cccHHHHHHHHHHHHHcCCeeEEEEecCCC
Confidence 00 112345677788888899999999999743
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=277.77 Aligned_cols=256 Identities=18% Similarity=0.258 Sum_probs=173.0
Q ss_pred hhccC-CCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 221 QDHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 221 ~~hw~-~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
+.||. ++++++||+.||++|+|+|||||.|+...++.++..+++..+++||++|++|+++||+||||+|+.+ .++.
T Consensus 62 ~~~w~~~~~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~~-~~~~-- 138 (395)
T 2jep_A 62 ETAWGNPTVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGDG-YNSV-- 138 (395)
T ss_dssp TTTTSCCCCCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGGG-CTTS--
T ss_pred ccccCCCcCcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCcc-ccCC--
Confidence 46785 5899999999999999999999999866665544566778899999999999999999999999873 1110
Q ss_pred CCCCCCCCCCCC-------hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC---C---hHHHHHHHHHHHHHHH
Q 009475 300 HSATRDGFQEWG-------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---A---LDTLKSYYKAGYDAVR 366 (534)
Q Consensus 300 ~sg~~~g~~~W~-------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~---~---~~~~~~~~~~~~~aIR 366 (534)
...|. +...+++.++|++||+||+++|.|++|||+|||+.... . .+.|.+++++++++||
T Consensus 139 -------~g~w~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~w~~~~~~~~~~~~~~~~~~~~aIR 211 (395)
T 2jep_A 139 -------QGGWLLVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAYNQIFVDTVR 211 (395)
T ss_dssp -------TTCCCCTTCSCHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCSCSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -------CCccccCCcccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 01232 23568899999999999999999999999999986321 1 2579999999999999
Q ss_pred hcC---CceEEEEeCCCCCCChh--h-hhccc----------CCCceEEEEEeecccCCCCCCCCc-----------hh-
Q 009475 367 KYT---STAYVIMSNRLGPADHK--E-LLSFA----------SGLSRVVIDVHYYNLFSNNFNGLN-----------VQ- 418 (534)
Q Consensus 367 ~~~---p~~~Iiv~~~~~~~~~~--~-~~~~~----------~~~~nvv~d~H~Y~~f~~~~~~~~-----------~~- 418 (534)
+++ |+++|++++...+.++. . -+..+ ...+|+||++|+|.|+.....+.. +.
T Consensus 212 ~~~~~np~~~I~v~g~~~~~~~~~~~~~~~~p~d~~~~~~i~~~~~~~v~s~H~Y~~~~~~~~~~~~~~~W~~~~~~~~~ 291 (395)
T 2jep_A 212 QTGGNNNARWLLVPGWNTNIDYTVGNYGFTLPTDNYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAK 291 (395)
T ss_dssp TSSGGGGTSCEEEECGGGCHHHHHSSSSCCCCCCTTSCTTSCTTCCCEEEEEEECCSHHHHTCSSSSCCBCSTTCSCGGG
T ss_pred HhCCCCCCcEEEECCCccCcccccccccccCCCCccccccCCCCCCCEEEEEEecCCccccCcccccccccccccCCccc
Confidence 995 57899997521111110 0 01111 134799999999998541110000 00
Q ss_pred ---hhH-HHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCC--cccHHHHHH
Q 009475 419 ---QNI-DYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVK--DASKQDYQR 492 (534)
Q Consensus 419 ---~~i-~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~--~a~~~~~~~ 492 (534)
+.. +.+..........+.+. +.+++ ||||++..... ..+.+...+
T Consensus 292 ~~~~~~~~~i~~~~~~~~~~~~~~-g~Pv~----------------------------igEfG~~~~~~~~~~~~~~~~~ 342 (395)
T 2jep_A 292 KSTWGQEDYLESQFKSMYDKFVTQ-GYPVV----------------------------IGEFGSIDKTSYDSSNNVYRAA 342 (395)
T ss_dssp BCSSCSHHHHHHHHHHHHHHTGGG-TCCEE----------------------------EEEECCCCCTTTCTTHHHHHHH
T ss_pred ccccCcHHHHHHHHHHHHHHHHHc-CCCEE----------------------------EeeccccCCCCccCCChHHHHH
Confidence 000 11111111111111112 22233 67777643221 113456679
Q ss_pred HHHHHHHHHhcCCCcEEEEcccc
Q 009475 493 FANAQLDVYGRATFGWAYWAHKC 515 (534)
Q Consensus 493 ~~~aq~~~~e~~~~GW~fWt~K~ 515 (534)
|++++++.+++.++||+||+++.
T Consensus 343 ~~~~~~~~~~~~~i~~~~W~~~~ 365 (395)
T 2jep_A 343 YAKAVTAKAKKYKMVPVYWDNGH 365 (395)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCeEEEECCCC
Confidence 99999999999999999999985
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=267.33 Aligned_cols=191 Identities=16% Similarity=0.201 Sum_probs=141.5
Q ss_pred eEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEe
Q 009475 167 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRI 246 (534)
Q Consensus 167 ~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRI 246 (534)
.|+++|+.+|+.+|.. |.+.|++... +|..- .++||+.||++|+|+|||
T Consensus 3 ~l~v~G~~i~d~nG~~----------~~l~Gvn~~~--------------------~w~~~-~~~~~~~lk~~G~N~VRi 51 (302)
T 1bqc_A 3 GLHVKNGRLYEANGQE----------FIIRGVSHPH--------------------NWYPQ-HTQAFADIKSHGANTVRV 51 (302)
T ss_dssp CSEEETTEEECTTSCB----------CCCEEEEECT--------------------TTCTT-CTTHHHHHHHTTCSEEEE
T ss_pred ceEEeCCEEECCCCCE----------EEEEEeeccc--------------------ccCcc-hHHHHHHHHHcCCCEEEE
Confidence 3788899998877763 4456665211 11111 127999999999999999
Q ss_pred CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Q 009475 247 PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLA 326 (534)
Q Consensus 247 Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA 326 (534)
|+++.. .+....+++||++|++|.++||+||||+|..++.++. + . +...+++.++|++||
T Consensus 52 ~~~~~~--------~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~~~~~~~~---~-----~----~~~~~~~~~~w~~ia 111 (302)
T 1bqc_A 52 VLSNGV--------RWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQ---S-----G----ASTLDQAVDYWIELK 111 (302)
T ss_dssp EECCSS--------SSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTS---T-----T----CCCHHHHHHHHHHTH
T ss_pred EccCCc--------ccCCCCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCC---C-----c----hhhHHHHHHHHHHHH
Confidence 997521 1222358999999999999999999999998876432 0 0 245789999999999
Q ss_pred HHhcCCCeEEEEEeccCCCCCCCC-hHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChh--------hhhcccCCCce
Q 009475 327 ARYANRPSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHK--------ELLSFASGLSR 397 (534)
Q Consensus 327 ~ryk~~~~vlg~eL~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~--------~~~~~~~~~~n 397 (534)
+|||++|.+++|||+|||+....+ .+.|.+++++++++||+++|+++|++++...+.++. .+.. ..+.+|
T Consensus 112 ~~~k~~~~vv~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 190 (302)
T 1bqc_A 112 SVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYA-SDPTGN 190 (302)
T ss_dssp HHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCHHHHHHHHHHH-TCTTCC
T ss_pred HHhcCCCCEEEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEECCCccccCchhhhhccchhccc-cCCCCC
Confidence 999999999999999999863211 124899999999999999999999998532223332 1221 234679
Q ss_pred EEEEEeecccCC
Q 009475 398 VVIDVHYYNLFS 409 (534)
Q Consensus 398 vv~d~H~Y~~f~ 409 (534)
++|++|.|.+++
T Consensus 191 ~v~s~H~Y~~~~ 202 (302)
T 1bqc_A 191 TVFSIHMYGVYS 202 (302)
T ss_dssp EEEEEEESGGGC
T ss_pred EEEEEEEccCCC
Confidence 999999998864
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=286.97 Aligned_cols=287 Identities=19% Similarity=0.299 Sum_probs=187.8
Q ss_pred ceEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHH-HHHHhCCccEE
Q 009475 166 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDF-KFLSSNGINAV 244 (534)
Q Consensus 166 ~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~-~~ia~~G~N~V 244 (534)
..++++|..+++.++.. +.+.|+|...... .. .+-..+++++|| +.||++|+|+|
T Consensus 28 ~~~~~~g~~i~d~~G~~----------~~l~GvN~~~~~~-----~~---------~~g~~~~~~~di~~~l~~~G~N~V 83 (481)
T 2osx_A 28 SGTALTPSYLKDDDGRS----------LILRGFNTASSAK-----SA---------PDGMPQFTEADLAREYADMGTNFV 83 (481)
T ss_dssp -----CCCCCBCTTCCE----------ECCEEEEECGGGG-----TC---------TTSCCSCCHHHHHHHHHHHCCCEE
T ss_pred cccccCCCeEECCCCCE----------EEeeeEecCCCCC-----CC---------CCCCccccHHHHHHHHHHCCCCEE
Confidence 44788888888877663 3345655222111 00 011246789999 99999999999
Q ss_pred EeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCC-------CCCCC--CCCCCCCCCCCCCCCC----
Q 009475 245 RIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA-------APGSQ--NGNEHSATRDGFQEWG---- 311 (534)
Q Consensus 245 RIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~-------~pG~q--ng~~~sg~~~g~~~W~---- 311 (534)
|||+.|+.+ +|.+ ..|+...+++|+++|++|+++||+||||+|. .|++| |+++..| ++.+.|.
T Consensus 84 Rl~v~w~~~-~p~~-g~~~~~~l~~l~~~v~~a~~~Gi~vildlH~d~~~~~~~P~~~~~ng~~~gg--~g~P~W~~~~~ 159 (481)
T 2osx_A 84 RFLISWRSV-EPAP-GVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIG--NGAPAWATYMD 159 (481)
T ss_dssp EEEECHHHH-CSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEECCBSSCGGGSTTTCSBTTBCSSS--BSSCGGGCCCT
T ss_pred EEeCcHHHc-CCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEccccccccccccccccccccccCC--CCCccceeccC
Confidence 999997644 5544 4788889999999999999999999999998 78877 3444222 1333331
Q ss_pred ---------------------------------hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC-----ChHH
Q 009475 312 ---------------------------------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-----ALDT 353 (534)
Q Consensus 312 ---------------------------------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~-----~~~~ 353 (534)
+...+++.++|+.||+|||++|.|++|||+|||..... +.+.
T Consensus 160 ~~~~~~~~~W~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~la~ryk~~p~Vi~~el~NEP~~~~~~~~~~~~~~ 239 (481)
T 2osx_A 160 GLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAYDLMNEPFGGSLQGPAFEAGP 239 (481)
T ss_dssp TCCCCCCSSGGGGGGSHHHHHHHHHHTTTTSSCTHHHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCTTCCTHHHHTTH
T ss_pred CCCccccccchhhccchhhHHHHHHHhccccCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEeecCCCCCCCCCccccHHH
Confidence 34578899999999999999999999999999997421 2467
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEeCC-CCCCCh---hhhhcccC---CCceEEEEEeecccCC---CCCCCCchhhhHHH
Q 009475 354 LKSYYKAGYDAVRKYTSTAYVIMSNR-LGPADH---KELLSFAS---GLSRVVIDVHYYNLFS---NNFNGLNVQQNIDY 423 (534)
Q Consensus 354 ~~~~~~~~~~aIR~~~p~~~Iiv~~~-~~~~~~---~~~~~~~~---~~~nvv~d~H~Y~~f~---~~~~~~~~~~~i~~ 423 (534)
|.+++++++++||+++|+++|++++. |+ .++ ..+..+.. ..+|+||++|+|.++. ..+...+.+.....
T Consensus 240 l~~~~~~~~~aIR~~dp~~~I~v~~~~~~-~~~~~~~~l~~~~~p~~~~~~~v~s~H~Y~~~~~~~~~~~~~~~~~~~~~ 318 (481)
T 2osx_A 240 LAAMYQRTTDAIRQVDQDTWVCVAPQAIG-VNQGLPSGLTKIDDPRAGQQRIAYCPHLYPLPLDIGDGHEGLARTLTDVT 318 (481)
T ss_dssp HHHHHHHHHHHHTTTCSSSEEEECCCSTT-GGGTCCCCCCCCCCCSSSSCCEEECCBCCCHHHHHTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCcEEEEcCcccc-cccCCCCCCcccCCCcccCCCEEEEEEecCcccccCCccCccchhhHHHH
Confidence 89999999999999999999999853 32 111 12222211 2468999999997641 11211111100111
Q ss_pred HHhhhhhhhhhhhccC-CCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHh
Q 009475 424 VNNQRASDLGAVTTSN-GPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYG 502 (534)
Q Consensus 424 i~~~~~~~l~~~~~~~-gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e 502 (534)
+..... .+....+.. +.+++ ||||+.... .+...+|++++++.++
T Consensus 319 ~~~~~~-~~~~~~~~~~g~Pv~----------------------------igEfG~~~~-----~~~~~~~~~~~~~~~~ 364 (481)
T 2osx_A 319 IDAWRA-NTAHTARVLGDVPII----------------------------LGSFGLDTT-----LPGARDYIERVYGTAR 364 (481)
T ss_dssp HHHHHH-HHHHHHHHTTSCCBE----------------------------ECBCCCCTT-----STTHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHhcCCCEE----------------------------EeccCCCCC-----chHHHHHHHHHHHHHH
Confidence 111111 111111112 22233 788874321 1245688999999999
Q ss_pred cCCCcEEEEcccc
Q 009475 503 RATFGWAYWAHKC 515 (534)
Q Consensus 503 ~~~~GW~fWt~K~ 515 (534)
+.++||+||+++.
T Consensus 365 ~~~ig~~~W~~~~ 377 (481)
T 2osx_A 365 EMGAGVSYWSSDP 377 (481)
T ss_dssp HHTCEEEESCCSS
T ss_pred HcCCCeEEECCCC
Confidence 8899999999985
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-31 Score=271.25 Aligned_cols=251 Identities=14% Similarity=0.221 Sum_probs=176.1
Q ss_pred EEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeC
Q 009475 168 IQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 247 (534)
Q Consensus 168 Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIP 247 (534)
|+++|+++++.+|.. |.+.|++. ...| + ..+ .+++|+.|+++|+|+||||
T Consensus 25 l~V~G~~l~d~nG~~----------~~lrGvn~-~~~~-----~-------------~~~-~~~~i~~lk~~G~N~VRip 74 (345)
T 3jug_A 25 FYVDGNTLYDANGQP----------FVMKGINH-GHAW-----Y-------------KDT-ASTAIPAIAEQGANTIRIV 74 (345)
T ss_dssp CEEETTEEECTTSCB----------CCCEEEEE-CGGG-----C-------------GGG-HHHHHHHHHHTTCSEEEEE
T ss_pred eEEECCEEEccCCCE----------EEEecccc-cccc-----c-------------ChH-HHHHHHHHHHcCCCEEEEE
Confidence 899999999887764 44567651 1111 1 111 2579999999999999999
Q ss_pred cccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009475 248 VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 327 (534)
Q Consensus 248 v~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ 327 (534)
+.. +.+|.+..++.||++|++|.++|||||||+|..+|+++ ....++++++|++||+
T Consensus 75 ~~~--------~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~~g~~~---------------~~~~~~~~~~w~~iA~ 131 (345)
T 3jug_A 75 LSD--------GGQWEKDDIDTVREVIELAEQNKMVAVVEVHDATGRDS---------------RSDLDRAVDYWIEMKD 131 (345)
T ss_dssp ECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCC---------------HHHHHHHHHHHHHTHH
T ss_pred ecC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc---------------HHHHHHHHHHHHHHHH
Confidence 851 23566778999999999999999999999999875321 2457899999999999
Q ss_pred HhcCC-CeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC-CCCCCChhhh-------hcccCCCceE
Q 009475 328 RYANR-PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPADHKEL-------LSFASGLSRV 398 (534)
Q Consensus 328 ryk~~-~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~~~~~~~-------~~~~~~~~nv 398 (534)
|||++ +.|+ |||+|||+. ..+...|.+++++++++||+++|+++|++++ .|. .++..+ +. .++++|+
T Consensus 132 ryk~~~~~Vi-~el~NEP~~-~~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w~-~~~~~~~~~~~~~~~-~dp~~nl 207 (345)
T 3jug_A 132 ALIGKEDTVI-INIANEWYG-SWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWG-QYPQSIHDYGQDVFN-ADPLKNT 207 (345)
T ss_dssp HHTTCTTTEE-EECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTT-TBTHHHHHHHHHHHH-TCTTCCE
T ss_pred HHcCCCCeEE-EEecCCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCcc-ccchhhccchhhhcc-cCCccce
Confidence 99999 5664 999999997 3456789999999999999999999999986 444 343221 21 2457899
Q ss_pred EEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhccccccccccccc
Q 009475 399 VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTC 478 (534)
Q Consensus 399 v~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~ 478 (534)
||++|+|.... .+.+. +... +..+.. ++.++| +|||++
T Consensus 208 vys~H~Y~~~g-----~~~~~----~~~~----~~~~~~-~g~Pv~----------------------------igEfG~ 245 (345)
T 3jug_A 208 IFSIHMYEYAG-----GDANT----VRSN----IDRVID-QDLALV----------------------------IGEFGH 245 (345)
T ss_dssp EEEEEESTTTT-----SSHHH----HHHH----HHHHHT-TTCCEE----------------------------EEEECC
T ss_pred EEEEEecCCCC-----CCHHH----HHHH----HHHHHH-cCCcEE----------------------------EECcCC
Confidence 99999994322 12111 1111 111222 233455 566655
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccCCCCCChhH
Q 009475 479 EWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKW 524 (534)
Q Consensus 479 ~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~~~Ws~~~ 524 (534)
.... . + .+++++++.+++.+++|++|+|+..+..|+|..
T Consensus 246 ~~~~-~---~---~~~~~~l~~~~~~~i~w~~W~~~~~~~~~~~l~ 284 (345)
T 3jug_A 246 RHTD-G---D---VDEDTILSYSEETGTGWLAWSWKGNSAEWDYLD 284 (345)
T ss_dssp CCCC---------CCHHHHHHHHHHHTCEEEESCSSCCCGGGGGGC
T ss_pred CCCC-C---C---HHHHHHHHHHHHcCCEEEEEEEECCCCCccccc
Confidence 3211 0 0 124677888888999999999998765554443
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-31 Score=265.06 Aligned_cols=189 Identities=17% Similarity=0.257 Sum_probs=140.7
Q ss_pred eEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHH-hCCccEEE
Q 009475 167 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAVR 245 (534)
Q Consensus 167 ~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~VR 245 (534)
+|+++|+.++ .+|.. |.+.|+|....+ ...|. ..+++++||+.|| ++|+|+||
T Consensus 4 ~l~v~g~~i~-~nG~~----------v~l~Gvn~~~~~----~~~~~-----------~~~~~~~di~~~~~~~G~N~vR 57 (293)
T 1tvn_A 4 KLTVSGNQIL-AGGEN----------TSFAGPSLFWSN----TGWGA-----------EKFYTAETVAKAKTEFNATLIR 57 (293)
T ss_dssp CEEEETTEEE-ETTEE----------CCCEEEEECCCC----TTSSC-----------GGGCSHHHHHHHHHHHCCSEEE
T ss_pred cEEecCCEEE-eCCCE----------EEEEeeeecccc----cccCC-----------CCCCCHHHHHHHHHhcCCCEEE
Confidence 5788888887 56542 445676632111 01110 2468899999999 59999999
Q ss_pred eCcccccccCCCCCCCCC----CchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHH
Q 009475 246 IPVGWWIANDPTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAV 321 (534)
Q Consensus 246 IPv~~w~~~~~~~~~~~~----~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~ 321 (534)
||+.|. +.. .+|. ++.+++||++|++|.++||+||||+|..++. ...+++.++
T Consensus 58 i~~~~~----~~~-~~~~~~~p~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~------------------~~~~~~~~~ 114 (293)
T 1tvn_A 58 AAIGHG----TST-GGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEAH------------------TDQATAVRF 114 (293)
T ss_dssp EEEECC----TTS-TTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCGG------------------GCHHHHHHH
T ss_pred Eecccc----CCC-CCccccChHHHHHHHHHHHHHHHHCCCEEEEEcCCCCcc------------------ccHHHHHHH
Confidence 999873 222 1333 3689999999999999999999999987631 246789999
Q ss_pred HHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC-CCCCCChhhhhcccCCCceEEE
Q 009475 322 IDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPADHKELLSFASGLSRVVI 400 (534)
Q Consensus 322 w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~~~~~~~~~~~~~~~nvv~ 400 (534)
|++||+||+++|+|+ |||+|||..... .+.|++++++++++||+++|+++|++++ .|. .+.......+..++|+||
T Consensus 115 ~~~~a~r~~~~p~V~-~el~NEP~~~~~-~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~-~~~~~~~~~p~~~~n~v~ 191 (293)
T 1tvn_A 115 FEDVATKYGQYDNVI-YEIYNEPLQISW-VNDIKPYAETVIDKIRAIDPDNLIVVGTPTWS-QDVDVASQNPIDRANIAY 191 (293)
T ss_dssp HHHHHHHHTTCTTEE-EECCSCCCSCCT-TTTHHHHHHHHHHHHHTTCCSCEEEECCHHHH-TCHHHHHHSCCCSSSEEE
T ss_pred HHHHHHHhCCCCeEE-EEccCCCCCCch-HHHHHHHHHHHHHHHHhhCCCCEEEECCCCcc-cccchhccCCCCCCCEEE
Confidence 999999999999998 999999986321 2579999999999999999999999975 333 222221111234579999
Q ss_pred EEeeccc
Q 009475 401 DVHYYNL 407 (534)
Q Consensus 401 d~H~Y~~ 407 (534)
++|.|.+
T Consensus 192 s~H~Y~~ 198 (293)
T 1tvn_A 192 TLHFYAG 198 (293)
T ss_dssp EEEEETT
T ss_pred EEEeCCC
Confidence 9999976
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=261.89 Aligned_cols=190 Identities=18% Similarity=0.250 Sum_probs=140.5
Q ss_pred eEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHH-hCCccEEE
Q 009475 167 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAVR 245 (534)
Q Consensus 167 ~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~VR 245 (534)
+|+++|+.+++ +|.. |.+.|++....+ ..+|. ..+++++||+.|+ ++|+|+||
T Consensus 4 ~l~v~g~~~~~-nG~~----------~~l~Gvn~~~~~----~~~~~-----------~~~~~~~d~~~l~~~~G~N~vR 57 (291)
T 1egz_A 4 PLSVNGNKIYA-GEKA----------KSFAGNSLFWSN----NGWGG-----------EKFYTADTVASLKKDWKSSIVR 57 (291)
T ss_dssp CEEEETTEEEE-TTEE----------CCCEEEEEEECC----TTSSG-----------GGGCSHHHHHHHHHTTCCCEEE
T ss_pred cEEecCCEEEE-CCCE----------EEEEEEeecccc----cccCC-----------CccCCHHHHHHHHHHcCCCEEE
Confidence 57888888887 6542 445666532111 01110 2467999999999 89999999
Q ss_pred eCcccccccCCCCCCCCCC-chHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH
Q 009475 246 IPVGWWIANDPTPPKPFVG-GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDF 324 (534)
Q Consensus 246 IPv~~w~~~~~~~~~~~~~-~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~ 324 (534)
||+.|. +. .+....+ +.+++||++|++|.++||+||||+|..++ +...+.+.++|++
T Consensus 58 ~~~~~~---~~-~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h~~~~------------------~~~~~~~~~~~~~ 115 (291)
T 1egz_A 58 AAMGVQ---ES-GGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA------------------ENNRSEAIRFFQE 115 (291)
T ss_dssp EEEECS---ST-TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG------------------GGGHHHHHHHHHH
T ss_pred Eecccc---cc-CCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEcCCCCc------------------chhHHHHHHHHHH
Confidence 999863 11 1111222 47999999999999999999999998642 2457899999999
Q ss_pred HHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCC-CCCCChhhhhcccCCCceEEEEEe
Q 009475 325 LAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGPADHKELLSFASGLSRVVIDVH 403 (534)
Q Consensus 325 lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~-~~~~~~~~~~~~~~~~~nvv~d~H 403 (534)
||+||+++|+|+ |||+|||.... ..+.|.+++++++++||+.+|+++|++++. |. .+.......+..++|++|++|
T Consensus 116 ia~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~-~~~~~~~~~p~~~~~~~~s~H 192 (291)
T 1egz_A 116 MARKYGNKPNVI-YEIYNEPLQVS-WSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWS-QNVDEASRDPINAKNIAYTLH 192 (291)
T ss_dssp HHHHHTTSTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHH-TCHHHHHTSCCCSSSEEEEEE
T ss_pred HHHHhCCCCcEE-EEecCCCCCCc-hHHHHHHHHHHHHHHHHhcCCCCEEEECCCCcc-cccchhhcCCCCCCCEEEEEE
Confidence 999999999998 99999998632 225799999999999999999999999753 32 232222112223479999999
Q ss_pred eccc
Q 009475 404 YYNL 407 (534)
Q Consensus 404 ~Y~~ 407 (534)
.|.+
T Consensus 193 ~Y~~ 196 (291)
T 1egz_A 193 FYAG 196 (291)
T ss_dssp EETT
T ss_pred ecCC
Confidence 9976
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=276.82 Aligned_cols=188 Identities=14% Similarity=0.170 Sum_probs=145.6
Q ss_pred ceEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEE
Q 009475 166 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 245 (534)
Q Consensus 166 ~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VR 245 (534)
.+|+++|+.++++++.. |.+.|+|. .+ .|....+++||+.||++|+|+||
T Consensus 8 ~~l~v~G~~i~d~nG~~----------v~lrGvN~-~~-------------------~W~~~~~~~di~~ik~~G~N~VR 57 (464)
T 1wky_A 8 SGFYVSGTTLYDANGNP----------FVMRGINH-GH-------------------AWYKDQATTAIEGIANTGANTVR 57 (464)
T ss_dssp CCCEEETTEEECTTSCB----------CCCEEEEE-CG-------------------GGCGGGHHHHHHHHHTTTCSEEE
T ss_pred CCeEEeCCEEECCCCCE----------EEEEEEEe-Cc-------------------ccCCcchHHHHHHHHHCCCCEEE
Confidence 46899999999887764 44567662 11 14344478999999999999999
Q ss_pred eCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHH
Q 009475 246 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFL 325 (534)
Q Consensus 246 IPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~l 325 (534)
||+.. +.+|.+..+++||++|++|.++||+||||+|..++.++ +...+++.++|++|
T Consensus 58 ipv~~--------g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~~~g~~~---------------~~~~~~~~~~w~~i 114 (464)
T 1wky_A 58 IVLSD--------GGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDS---------------IASLNRAVDYWIEM 114 (464)
T ss_dssp EEECC--------SSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCC---------------HHHHHHHHHHHHHT
T ss_pred EEcCC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCCC---------------hHHHHHHHHHHHHH
Confidence 99962 12455678999999999999999999999999876432 25678999999999
Q ss_pred HHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC-CCCCCChh-------hhhcccCCCce
Q 009475 326 AARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPADHK-------ELLSFASGLSR 397 (534)
Q Consensus 326 A~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~~~~~-------~~~~~~~~~~n 397 (534)
|+||++++..++|||+|||+.. .+.+.|.++|++++++||+++|+++|++++ .|. .... .+. ..++.+|
T Consensus 115 A~ryk~~~~~Vi~eL~NEP~~~-~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w~-~~~~~~~~~~~~l~-~~dp~~n 191 (464)
T 1wky_A 115 RSALIGKEDTVIINIANEWFGS-WDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWG-QFPQSIHDYGREVF-NADPQRN 191 (464)
T ss_dssp GGGTTTCTTTEEEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTT-TBTHHHHHHHHHHH-HTCTTCC
T ss_pred HHHHcCCCCeEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCcC-cccccccccchhcc-ccCCCCC
Confidence 9999999444469999999963 456789999999999999999999999985 343 2211 121 1234679
Q ss_pred EEEEEeecccCC
Q 009475 398 VVIDVHYYNLFS 409 (534)
Q Consensus 398 vv~d~H~Y~~f~ 409 (534)
+||++|+|.++.
T Consensus 192 iv~s~H~Y~~~g 203 (464)
T 1wky_A 192 TMFSIHMYEYAG 203 (464)
T ss_dssp EEEEEEESTTTS
T ss_pred EEEEEEEECCCC
Confidence 999999997653
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=263.73 Aligned_cols=192 Identities=19% Similarity=0.227 Sum_probs=142.7
Q ss_pred ceEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHH-hCCccEE
Q 009475 166 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAV 244 (534)
Q Consensus 166 ~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~V 244 (534)
.+|+++|..+++.++.. |.+.|++.....| + ..+++++||+.|+ ++|+|+|
T Consensus 9 ~~l~v~G~~i~d~~G~~----------v~l~Gvn~~~~~w-----~-------------~~~~~~~d~~~l~~~~G~N~v 60 (306)
T 2cks_A 9 GKVQVCGTQLCDEHGNP----------VQLRGMSTHGIQW-----F-------------DHCLTDSSLDALAYDWKADII 60 (306)
T ss_dssp CSCEEETTEEECTTSCB----------CCCEEEECCCHHH-----H-------------GGGCSHHHHHHHHHTSCCSEE
T ss_pred CeEEEECCEEECCCCCE----------EEEEEEecCcccc-----c-------------CcCCCHHHHHHHHHHcCCCEE
Confidence 46888999998777653 4456765321111 1 1346899999886 6999999
Q ss_pred EeCcccccccCCCCCCCCCCc-hHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHH
Q 009475 245 RIPVGWWIANDPTPPKPFVGG-SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 323 (534)
Q Consensus 245 RIPv~~w~~~~~~~~~~~~~~-~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~ 323 (534)
|||+.|. . ++.+.++. .+++||++|++|.++||+||||+|..+++. + ..+.+++.++|+
T Consensus 61 Ri~~~~~---~--~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild~h~~~~g~------------~---~~~~~~~~~~~~ 120 (306)
T 2cks_A 61 RLSMYIQ---E--DGYETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPGD------------P---HYNLDRAKTFFA 120 (306)
T ss_dssp EEEEESS---T--TSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSCC------------G---GGGHHHHHHHHH
T ss_pred EEEeeec---C--CCcccCHHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCC------------c---ccCHHHHHHHHH
Confidence 9999853 1 11223333 789999999999999999999999975210 0 135778999999
Q ss_pred HHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC-CCCCC------ChhhhhcccCCCc
Q 009475 324 FLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPA------DHKELLSFASGLS 396 (534)
Q Consensus 324 ~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~~------~~~~~~~~~~~~~ 396 (534)
+||+||+++|+|+ |||+|||+. .+...|++++++++++||+++|+++|++++ .|... +.......+..++
T Consensus 121 ~ia~~y~~~~~V~-~el~NEP~~--~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~~~p~~~~ 197 (306)
T 2cks_A 121 EIAQRHASKTNVL-YEIANEPNG--VSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPVNAS 197 (306)
T ss_dssp HHHHHHTTCSSEE-EECCSCCCS--SCHHHHHHHHHHHHHHHHHHCTTCCEEECCHHHHSTTGGGTCCTHHHHHSCCSCS
T ss_pred HHHHHhCCCCcEE-EEcCCCCCC--CCHHHHHHHHHHHHHHHHHhCCCCEEEECCCCccccccccccchhhhhcCCCCcC
Confidence 9999999999998 999999986 356789999999999999999999999975 23211 1222222222357
Q ss_pred eEEEEEeecccC
Q 009475 397 RVVIDVHYYNLF 408 (534)
Q Consensus 397 nvv~d~H~Y~~f 408 (534)
|+||++|+|.++
T Consensus 198 ~~v~s~H~Y~~~ 209 (306)
T 2cks_A 198 NIMYAFHFYAAS 209 (306)
T ss_dssp SEEEEEEEETTT
T ss_pred CeEEEEeeCCCC
Confidence 999999999875
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-31 Score=273.49 Aligned_cols=203 Identities=17% Similarity=0.187 Sum_probs=155.0
Q ss_pred CceEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEE
Q 009475 165 GMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAV 244 (534)
Q Consensus 165 G~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~V 244 (534)
-.+|+++|+.+++.+|.. |.+.|++....++ ......| .++||+.||++|+|+|
T Consensus 49 ~~~l~v~G~~~~d~nG~~----------~~l~Gvn~~~~~~------------~~~~g~~----~~~di~~ik~~G~N~V 102 (359)
T 4hty_A 49 LPLIKVEGNRFVDEQGKT----------IVFRGVNISDPDK------------IDKDKRF----SKKHFEVIRSWGANVV 102 (359)
T ss_dssp CCCCEEETTEEECTTCCE----------ECCEEEEECCHHH------------HHHTTCC----SHHHHHHHHHTTCSEE
T ss_pred CCcEEEeCCEEECCCCCE----------EEEEEEecCCccc------------CCCCCCc----CHHHHHHHHhcCCCEE
Confidence 467999999999887764 6667877432221 1112233 4899999999999999
Q ss_pred EeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-h---hhHHHHHH
Q 009475 245 RIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-D---SNVADTVA 320 (534)
Q Consensus 245 RIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~-~---~~~~~~~~ 320 (534)
|||+.++.+... ..+..++.||++|++|.++||+||||+|..++.+++ .|. + ...+.+.+
T Consensus 103 Ri~~~~~~~~~~-----~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~-----------~~~~~~~~~~~~~~~~ 166 (359)
T 4hty_A 103 RVPVHPRAWKER-----GVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSE-----------MFQNNSYHTTKGETFD 166 (359)
T ss_dssp EEEECHHHHHHH-----HHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTT-----------EESSGGGCCCHHHHHH
T ss_pred EEeccHHHhhcc-----CCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcc-----------cccCCcchhHHHHHHH
Confidence 999988654321 124589999999999999999999999998765432 232 1 34789999
Q ss_pred HHHHHHHHhcCCCeEEEEEeccCCCCC-----CCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhcccCCC
Q 009475 321 VIDFLAARYANRPSLAAIELINEPLAP-----GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 395 (534)
Q Consensus 321 ~w~~lA~ryk~~~~vlg~eL~NEP~~~-----~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~~~~~ 395 (534)
+|++||+|||++|.|++|||+|||... ..+.+.|++++++++++||+.+|+++|++++...+.+...+...+..+
T Consensus 167 ~~~~la~ryk~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~w~~~~~~~~~~p~~~ 246 (359)
T 4hty_A 167 FWRRVSERYNGINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVAGFNWAYDLKEAAANPIDR 246 (359)
T ss_dssp HHHHHHHHTTTCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECHHHHTCCHHHHHSCCSS
T ss_pred HHHHHHHHhCCCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcCcccccccchhhcCCCCC
Confidence 999999999999999999999999863 245688999999999999999999999998632223444443333346
Q ss_pred ceEEEEEeecccCC
Q 009475 396 SRVVIDVHYYNLFS 409 (534)
Q Consensus 396 ~nvv~d~H~Y~~f~ 409 (534)
+|++|++|+|.++.
T Consensus 247 ~n~~ys~H~Y~~~~ 260 (359)
T 4hty_A 247 QNIAYVSHPYPQKV 260 (359)
T ss_dssp SSEEEECCCCTTSS
T ss_pred CCEEEEEEeCCCCC
Confidence 89999999997753
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-29 Score=268.00 Aligned_cols=193 Identities=18% Similarity=0.242 Sum_probs=139.5
Q ss_pred ceEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEE
Q 009475 166 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 245 (534)
Q Consensus 166 ~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VR 245 (534)
.+|+++|+.||++++. | +.|++ +..||.+|++++||+.||++|+|+||
T Consensus 10 ~~l~v~G~~ivd~~G~--------~----lrGv~--------------------~~~~w~~~~~~~d~~~i~~~G~N~VR 57 (491)
T 2y8k_A 10 PRLNAARTTFVGDNGQ--------P----LRGPY--------------------TSTEWTAAAPYDQIARVKELGFNAVH 57 (491)
T ss_dssp CEECTTSSSEECTTSC--------B----CEEEE--------------------EECSSSCCCCHHHHGGGGGGTCCEEE
T ss_pred ceEEeCCCEEECCCCC--------E----eeccc--------------------ccCCcCCCCCHHHHHHHHHcCCCEEE
Confidence 5789999999987765 2 22321 01256677899999999999999999
Q ss_pred eCcccccccCCCCCCCCCC-chHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH
Q 009475 246 IPVGWWIANDPTPPKPFVG-GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDF 324 (534)
Q Consensus 246 IPv~~w~~~~~~~~~~~~~-~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~ 324 (534)
||+.||...-+.++ +..+ ..+++||++|++|.++||+||||+|... +++ ..+.++++++|++
T Consensus 58 ipv~~~~~~~~~~~-~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~~--~~~--------------~~~~~~~~~~w~~ 120 (491)
T 2y8k_A 58 LYAECFDPRYPAPG-SKAPGYAVNEIDKIVERTRELGLYLVITIGNGA--NNG--------------NHNAQWARDFWKF 120 (491)
T ss_dssp EEEEECCTTTTSTT-CCCTTTTHHHHHHHHHHHHHHTCEEEEEEECTT--CTT--------------CCCHHHHHHHHHH
T ss_pred ECceeecccccCCC-ccChhHHHHHHHHHHHHHHHCCCEEEEECCCCC--CCc--------------cccHHHHHHHHHH
Confidence 99987642111111 2333 3699999999999999999999999731 110 1346889999999
Q ss_pred HHHHhcCCCeEEEEEeccCCCCCCC-Ch------HHHHHHHHHHHHHHHhcCCceEEEEeCC--CCC-CCh----hhhh-
Q 009475 325 LAARYANRPSLAAIELINEPLAPGV-AL------DTLKSYYKAGYDAVRKYTSTAYVIMSNR--LGP-ADH----KELL- 389 (534)
Q Consensus 325 lA~ryk~~~~vlg~eL~NEP~~~~~-~~------~~~~~~~~~~~~aIR~~~p~~~Iiv~~~--~~~-~~~----~~~~- 389 (534)
||+|||++|.|+ |||+|||+.... .. +.|++++++++++||+++|+++|++++. +.+ .++ ..+.
T Consensus 121 iA~ryk~~p~Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~~~~g~~~~~~~~~~l~~ 199 (491)
T 2y8k_A 121 YAPRYAKETHVL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGGKGGAAEALKDIRA 199 (491)
T ss_dssp HHHHHTTCTTEE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSCEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCceE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcEEEEecccccCCCcccchhhccccc
Confidence 999999999998 999999985221 11 2399999999999999999999999741 100 011 1111
Q ss_pred -------cccCCCceEEEEEeecccC
Q 009475 390 -------SFASGLSRVVIDVHYYNLF 408 (534)
Q Consensus 390 -------~~~~~~~nvv~d~H~Y~~f 408 (534)
..+..+.|+||++|+|.+.
T Consensus 200 ~~~~~~~~~~~~~~n~v~s~H~Y~~~ 225 (491)
T 2y8k_A 200 FNKAVFGNENAVWTNEAVAFHGYAGW 225 (491)
T ss_dssp HHHHHHSSTTCCCSSEEEEEESTTCH
T ss_pred ccccccccCCCCCCceeEEEeeCCCC
Confidence 0112457999999999763
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=212.44 Aligned_cols=149 Identities=17% Similarity=0.178 Sum_probs=112.8
Q ss_pred CCHHHHHHHHhCCccEEEeCccc---ccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCC---CCCCCCC--
Q 009475 228 ITDEDFKFLSSNGINAVRIPVGW---WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP---GSQNGNE-- 299 (534)
Q Consensus 228 ite~d~~~ia~~G~N~VRIPv~~---w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~p---G~qng~~-- 299 (534)
..++||+.||++|+|+||+++.. |...++.+ ..|++..++.||++|++|+++||+||||||... |+.....
T Consensus 43 ~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~-g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~~w 121 (373)
T 1rh9_A 43 KVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAP-GVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEW 121 (373)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEET-TEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECeecCCCCccccCCC-CccCHHHHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHHHH
Confidence 34899999999999999998631 33333333 357777899999999999999999999999631 1100000
Q ss_pred --CCCCC--CCCCCCC-hhhHHHHHHHHHHHHHH--------hcCCCeEEEEEeccCCCCCCC-ChHHHHHHHHHHHHHH
Q 009475 300 --HSATR--DGFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAV 365 (534)
Q Consensus 300 --~sg~~--~g~~~W~-~~~~~~~~~~w~~lA~r--------yk~~~~vlg~eL~NEP~~~~~-~~~~~~~~~~~~~~aI 365 (534)
..|.. .....|. +...+.+.++|+.|++| |+++|.|++|||+|||..... +.+.+.+|+++++++|
T Consensus 122 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~n~~tg~~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~i 201 (373)
T 1rh9_A 122 AVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYL 201 (373)
T ss_dssp HHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHH
T ss_pred HhhcCCCCCchhhcccCHHHHHHHHHHHHHHHhccCccCCccccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHH
Confidence 00100 0112344 66788999999999999 999999999999999986422 3478999999999999
Q ss_pred HhcCCceEEEEe
Q 009475 366 RKYTSTAYVIMS 377 (534)
Q Consensus 366 R~~~p~~~Iiv~ 377 (534)
|+.+|+++|+++
T Consensus 202 r~~dp~~~v~~g 213 (373)
T 1rh9_A 202 KSIDSNHLLEIG 213 (373)
T ss_dssp HHHCCSSEEECC
T ss_pred HhhCCCceEEeC
Confidence 999999999886
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=208.79 Aligned_cols=175 Identities=12% Similarity=0.079 Sum_probs=118.6
Q ss_pred CCHHHHHHHHhCCccEEEeCcccccccCC---CCCCC--CCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC-
Q 009475 228 ITDEDFKFLSSNGINAVRIPVGWWIANDP---TPPKP--FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS- 301 (534)
Q Consensus 228 ite~d~~~ia~~G~N~VRIPv~~w~~~~~---~~~~~--~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s- 301 (534)
..++||+.||++|+|+||||+.++....| .++.. .++..++.+|++|++|.++||+||||+|.. +.++
T Consensus 46 ~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~~~------~~~~~ 119 (353)
T 2c0h_A 46 TFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNG------AVKQS 119 (353)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEEC------SCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEccCc------cccCC
Confidence 34889999999999999999988744333 11111 123689999999999999999999999741 1010
Q ss_pred CCCCCCCCCC-h-hhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC---------------------------CChH
Q 009475 302 ATRDGFQEWG-D-SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG---------------------------VALD 352 (534)
Q Consensus 302 g~~~g~~~W~-~-~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~---------------------------~~~~ 352 (534)
|.......+. + ...+.+.++|+.|++||+++|+|++|||+|||.... ...+
T Consensus 120 g~~~~~~~~~~~~~~~~~~~~~~~~~a~ry~~~p~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 199 (353)
T 2c0h_A 120 THYRLNGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQ 199 (353)
T ss_dssp THHHHHHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHH
T ss_pred CcccccceEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHH
Confidence 1000000011 1 222334477799999999999999999999998530 1237
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEeC--CCCCCChhhhhcc----------cCCCceE-EEEEeecccC
Q 009475 353 TLKSYYKAGYDAVRKYTSTAYVIMSN--RLGPADHKELLSF----------ASGLSRV-VIDVHYYNLF 408 (534)
Q Consensus 353 ~~~~~~~~~~~aIR~~~p~~~Iiv~~--~~~~~~~~~~~~~----------~~~~~nv-v~d~H~Y~~f 408 (534)
.+.+++++++++||+++|+++|+++. .+...+....... ....+++ ++++|+|.+.
T Consensus 200 ~~~~~~~~~~~~Ir~~dp~~~V~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~D~~s~H~Y~~~ 268 (353)
T 2c0h_A 200 EIGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQ 268 (353)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBT
T ss_pred HHHHHHHHHHHHHHhhCCCCeEEECCccccCCCcccCcCCCCcchhhhhhccccCCCCCEEEEeeCCCc
Confidence 89999999999999999999999873 1211110000000 0124677 9999999753
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-22 Score=204.63 Aligned_cols=148 Identities=21% Similarity=0.255 Sum_probs=110.4
Q ss_pred CHHHHHHHHhCCccEEEeCcccccccCCC---------C--CCCCC--CchHHHHHHHHHHHHHCCCEEEEEcCCC---C
Q 009475 229 TDEDFKFLSSNGINAVRIPVGWWIANDPT---------P--PKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLHAA---P 292 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~~w~~~~~~---------~--~~~~~--~~~l~~ld~~v~~a~~~Gl~VIlDlH~~---p 292 (534)
.++||+.||++|+|+||+|+.++....|. + ...++ +..++.||++|++|.++||+||||+|.. +
T Consensus 38 ~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~~w~~~ 117 (344)
T 1qnr_A 38 VDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDY 117 (344)
T ss_dssp HHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTT
T ss_pred HHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEeccCcccc
Confidence 37899999999999999987553211111 1 11133 5679999999999999999999999953 1
Q ss_pred CCCCCC-CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 009475 293 GSQNGN-EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS 370 (534)
Q Consensus 293 G~qng~-~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p 370 (534)
|+.+.. ...|.. ....|. +...+.+.++|+.|++||+++|.|++|+|.|||.....+.+.+.+|+++++++||+++|
T Consensus 118 g~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~dp 196 (344)
T 1qnr_A 118 GGINAYVNAFGGN-ATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDS 196 (344)
T ss_dssp SHHHHHHHHHCSC-TTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHhCCC-hhhhcCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEcccCcccCCCChHHHHHHHHHHHHHHHhcCC
Confidence 110000 000000 112233 56678899999999999999999999999999987545668899999999999999999
Q ss_pred ceEEEEe
Q 009475 371 TAYVIMS 377 (534)
Q Consensus 371 ~~~Iiv~ 377 (534)
+++|+++
T Consensus 197 ~~~v~~g 203 (344)
T 1qnr_A 197 NHLVTLG 203 (344)
T ss_dssp SSEEECC
T ss_pred CCEEEEC
Confidence 9999985
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.6e-22 Score=207.14 Aligned_cols=148 Identities=20% Similarity=0.199 Sum_probs=113.4
Q ss_pred HHHHHHHHhCCccEEEeCccc---------ccccCCCCCCCCC--------CchHHHHHHHHHHHHHCCCEEEEEcCCC-
Q 009475 230 DEDFKFLSSNGINAVRIPVGW---------WIANDPTPPKPFV--------GGSSKVLDNAFDWAEKYGVKVIVDLHAA- 291 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~---------w~~~~~~~~~~~~--------~~~l~~ld~~v~~a~~~Gl~VIlDlH~~- 291 (534)
+++|+.||++|+|+||+++.. |...+|.++ .|+ +..++.||++|++|+++||+||||||..
T Consensus 46 ~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G-~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~~w 124 (383)
T 3pzg_A 46 DSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPG-VFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVNNW 124 (383)
T ss_dssp HHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTT-BCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCBSS
T ss_pred HHHHHHHHHcCCCEEEEeccccccccccccccccccCCC-cccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccccc
Confidence 789999999999999998754 334555433 555 6789999999999999999999999963
Q ss_pred --CCCCCCC-CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHH--------hcCCCeEEEEEeccCCCCCC-CChHHHHHHH
Q 009475 292 --PGSQNGN-EHSATRDGFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPG-VALDTLKSYY 358 (534)
Q Consensus 292 --pG~qng~-~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~r--------yk~~~~vlg~eL~NEP~~~~-~~~~~~~~~~ 358 (534)
.|+.... ...+......+|. +..++.+.++|+.|++| |+++|.|++|||.|||.... .+.+.+.+|+
T Consensus 125 ~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~tG~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~ 204 (383)
T 3pzg_A 125 DDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWV 204 (383)
T ss_dssp STTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHH
T ss_pred cccCCccchhhhcCCCccccccCCHHHHHHHHHHHHHHHhhhccccCcccCCCCcEEEEEecCCCCcccCccHHHHHHHH
Confidence 2211100 0001000111222 56788999999999999 99999999999999998643 2357899999
Q ss_pred HHHHHHHHhcCCceEEEEeC
Q 009475 359 KAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 359 ~~~~~aIR~~~p~~~Iiv~~ 378 (534)
++++++||+.+|+++|+++.
T Consensus 205 ~~~~~~IR~~Dp~~lVt~G~ 224 (383)
T 3pzg_A 205 KEMSSYIKSLDPNHLVAVGD 224 (383)
T ss_dssp HHHHHHHHHHCSSSEEECCC
T ss_pred HHHHHHHHhhCCCceEEEcc
Confidence 99999999999999999974
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.7e-22 Score=211.98 Aligned_cols=176 Identities=11% Similarity=0.099 Sum_probs=122.5
Q ss_pred HHHHHHHHhCCccEEEeC-------ccc--ccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC--
Q 009475 230 DEDFKFLSSNGINAVRIP-------VGW--WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN-- 298 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIP-------v~~--w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~-- 298 (534)
++||+.||++|+|+||++ +.+ |...++.+ ..|++..++.||++|++|.++||+|||+||..-....|.
T Consensus 65 ~~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~-g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~~~~~~~Gg~~~ 143 (440)
T 1uuq_A 65 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGF-GNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQ 143 (440)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSST-TCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHH
T ss_pred HHHHHHHHHcCCCEEEECcccCCCCCcccccccccCCC-CccCHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCchh
Confidence 789999999999999998 322 33333433 367788999999999999999999999999431100000
Q ss_pred ---CC-CCCC------CC--------CCCCC-hhhHHHHHHHHHHHHHH--------hcCCCeEEEEEeccCCCCCCC--
Q 009475 299 ---EH-SATR------DG--------FQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPGV-- 349 (534)
Q Consensus 299 ---~~-sg~~------~g--------~~~W~-~~~~~~~~~~w~~lA~r--------yk~~~~vlg~eL~NEP~~~~~-- 349 (534)
+. .+.. .+ ...|. +...+.+.++|+.|++| ||++|+|++|||+|||.....
T Consensus 144 ~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp~~~~~~~ 223 (440)
T 1uuq_A 144 YMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQT 223 (440)
T ss_dssp HHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTC
T ss_pred hHHHhccCCCCCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCcccccCcc
Confidence 00 0000 00 11233 55678899999999999 999999999999999986421
Q ss_pred ---ChHHHHHHHHHHHHHHHhcCCceEEEEeC-CCCCC--ChhhhhcccCCCceE-EEEEeeccc
Q 009475 350 ---ALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPA--DHKELLSFASGLSRV-VIDVHYYNL 407 (534)
Q Consensus 350 ---~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~~--~~~~~~~~~~~~~nv-v~d~H~Y~~ 407 (534)
+.+.+.+|+++++++||++||+++|+++. ++.+. +...+... ...+++ ++++|.|.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~Ir~~Dp~~lV~~g~~g~~~~~~~~~~~~~~-~~~~~iD~~s~H~Y~~ 287 (440)
T 1uuq_A 224 TAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDA-HATPDIDYLTYHMWIR 287 (440)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHH-HCSTTCCSEEEEECTT
T ss_pred cccchHHHHHHHHHHHHHHHhhCCCCeEEECCccccCCCCcchhhHHh-ccCCCCCEEEEEeCCC
Confidence 34678999999999999999999999863 22111 11111111 122333 899999965
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.5e-21 Score=192.08 Aligned_cols=144 Identities=18% Similarity=0.168 Sum_probs=106.9
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCC-------CCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPT-------PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSA 302 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~-------~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg 302 (534)
++||+.||++|+|+||||++......|. .+..+.+..++.+|+++++|.++||+||||+|.......+....
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~~~~~~~~~~~~- 123 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWNAAVNQDSHNRL- 123 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEECSSCCCGGGHH-
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecccccccCCCCcc-
Confidence 7899999999999999998754322211 11123457899999999999999999999999765432211000
Q ss_pred CCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC---------------------------CCChHHH
Q 009475 303 TRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP---------------------------GVALDTL 354 (534)
Q Consensus 303 ~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~---------------------------~~~~~~~ 354 (534)
...... +...+.+.+.|+.|++|||++|+|++|+|.|||... ....+.+
T Consensus 124 ---~~~~~~~~~~~~~~~~~~~~~v~r~kn~psi~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (351)
T 3vup_A 124 ---DGLIKDQHKLQSYIDKALKPIVNHVKGHVALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQDI 200 (351)
T ss_dssp ---HHHHHCHHHHHHHHHHTHHHHHHHTTTCTTBCCEEEEECGGGGBCCSCCCSSGGGCCGGGTTSSTTTTCSCBCHHHH
T ss_pred ---ccccCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEecccccccccccccccccccccchhhcccccccccccchhhH
Confidence 000001 233455678899999999999999999999999641 1234678
Q ss_pred HHHHHHHHHHHHhcCCceEEEEe
Q 009475 355 KSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 355 ~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
.++++++.++||+.+|+++|.++
T Consensus 201 ~~~~~~~~~~ik~~dp~~lv~~g 223 (351)
T 3vup_A 201 LRFLNWQADAIKTTDPGALVTMG 223 (351)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEE
T ss_pred HHHHHHHHHHhhccCCCCeeEec
Confidence 99999999999999999999886
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-20 Score=201.65 Aligned_cols=147 Identities=24% Similarity=0.380 Sum_probs=125.0
Q ss_pred ccceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecC-ceEEEEeeCCcEEEeecCCCCceEEEeecCCCC
Q 009475 64 DGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNE-TFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGY 142 (534)
Q Consensus 64 ~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~-~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~ 142 (534)
.+++|+|||. ||+|||+++|| .|+|||+.+++||||+|+++++ ++++||+.|||||++++. + .|+|+++++++
T Consensus 259 ~~~qVaL~s~-ngkyVsa~~gg--~l~An~~~~~~~EtFql~~~~~~~~vaLRs~~GkYl~~~~~--g-~v~a~~~~~g~ 332 (493)
T 3llp_A 259 SCAQVVLQAA-NERNVSTRQGM--DLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTAT--G-GVQSTASSKNA 332 (493)
T ss_dssp CCCEEEEECT-TSCEEECC-CC--CCEEEESCCSGGGCEEEEECTTTCCEEEECTTSCEEEECTT--S-BEEEEESSCCG
T ss_pred CCCEEEEEec-CCcEEEecCCc--eEEeeCCCCCCcEEEEEEEeCCCCEEEEEeCCCCEEEEeCC--C-cEEeccCCCCC
Confidence 5799999987 99999999987 5999999999999999999984 899999999999999874 3 59999999999
Q ss_pred CceEEEEEeCCCCceEEEEecCCceEEecccceeecCCCC-CCCCCCCCCceeeccccC----cccceeeecccCCCcch
Q 009475 143 SETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS-SSWDDSDPSVFKLNIVST----LRGEYQITNGFGPDKAP 217 (534)
Q Consensus 143 ~EtF~ivr~~~~~~~v~i~~~nG~~Lq~~g~~~v~ad~~~-~~W~~~~ps~F~~~~~~~----~~~E~~~~~~~G~~~a~ 217 (534)
||+|+|+.+. ++|+|++.||+||+++.+..|.|+... +. +.+|.|..+++ +.+|| ..+|..++.
T Consensus 333 ~E~F~i~~~~---g~vaLkA~NGkyVsa~~~G~L~An~~~~g~-----~E~F~l~l~nrp~l~Lrg~~---G~vg~~~~~ 401 (493)
T 3llp_A 333 SCYFDIEWRD---RRITLRASNGKFVTSKKNGQLAASVETAGD-----SELFLMKLINRPIIVFRGEH---GFIGCRKVT 401 (493)
T ss_dssp GGCBEEEEET---TEEEEECTTSCEEEECTTSBEEEEESSCCG-----GGCBEEEECSCSEECCEETT---EEEEEC--C
T ss_pred cceEEEEeCC---CeEEEEeCCCCEEEEcCCCEEEEecCCCCC-----CeEEEEEECCCceEEEeccc---CcEEeccCc
Confidence 9999999884 479999999999999977788998876 33 46798887764 56776 456777788
Q ss_pred hhhhhccCCC
Q 009475 218 QVLQDHWDSY 227 (534)
Q Consensus 218 ~~~~~hw~~~ 227 (534)
..++.||+++
T Consensus 402 ~~l~~nr~~~ 411 (493)
T 3llp_A 402 GTLDANRSSY 411 (493)
T ss_dssp CBEEEEESSC
T ss_pred chhhcccccc
Confidence 8999999877
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-18 Score=177.12 Aligned_cols=149 Identities=15% Similarity=0.108 Sum_probs=106.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCC-----------------------CCCCCCchHHHHHHHHHHHHHCCCEEEE
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTP-----------------------PKPFVGGSSKVLDNAFDWAEKYGVKVIV 286 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~-----------------------~~~~~~~~l~~ld~~v~~a~~~Gl~VIl 286 (534)
+++|+.||++|+|+||+...+.....+.+ ...+.+..++.+|++++.|+++||+||+
T Consensus 40 ~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~v~~ 119 (387)
T 4awe_A 40 EKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGIKLIV 119 (387)
T ss_dssp HHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCCEEEE
Confidence 67899999999999999543211100000 0011224578899999999999999999
Q ss_pred EcCCCCCCCCCCCC----CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC------------C
Q 009475 287 DLHAAPGSQNGNEH----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG------------V 349 (534)
Q Consensus 287 DlH~~pG~qng~~~----sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~------------~ 349 (534)
++|.......+.+. .+.......+. +..++.+.+.|+.+++|||++|+|+++||.|||.... .
T Consensus 120 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~k~~p~I~~w~l~NEp~~~~~~~~~~~~~~~~~ 199 (387)
T 4awe_A 120 ALTNNWADYGGMDVYTVNLGGKYHDDFYTVPKIKEAFKRYVKAMVTRYRDSEAILAWELANEARCGADGTRNLPRSEKGC 199 (387)
T ss_dssp ECCBSSSTTCCHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCSCCCTTTSCCCCSSSC
T ss_pred eecccccccCCCcccccccccccccccccCHHHHHHHHHHHHHHHhhcCCCcceeEeccCCCCCCCCCcccccccccccc
Confidence 99976433221100 00000011111 4567788999999999999999999999999998531 2
Q ss_pred ChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 350 ALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 350 ~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
..+.+..+++++.++||+.+|+++|.++.
T Consensus 200 ~~~~~~~~~~~~~~~ik~~Dp~~lv~~~~ 228 (387)
T 4awe_A 200 TTETVTGWIEEMSAYVKSLDGNHLVTWGG 228 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHHCSSSEEECCC
T ss_pred chHHHHHHHHHHHHHHHHhCCCCcEEEcc
Confidence 45789999999999999999999999864
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-19 Score=163.65 Aligned_cols=123 Identities=20% Similarity=0.289 Sum_probs=104.5
Q ss_pred ccccCCcCCcCCCCCcccccceeEEeeeeceeEEEeecCCCc----eEEeccCCCCCcceEEEEEecCceEEEEeeCCcE
Q 009475 46 EGWMKPSRFDDIPNKDLLDGTQVQFMSTKFQKYIAAESGGGT----IVVANRTSASGWETFRLWRVNETFYNFRVNNKQF 121 (534)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~a~~~g~~----~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~ 121 (534)
|+||+|++|+.|++ +++|++++ |+|++|+.+|.- ++..||+.+++||+|+|++.++++++||+++|+|
T Consensus 12 ~gW~~~~~~~~i~g-----~~~i~~~~---~~y~~A~~~G~~t~~~~~~~~~~~~~~~E~f~l~~~~~~~v~LRs~~GkY 83 (155)
T 2yug_A 12 GIWWTVSNFGEISG-----TIAIEMDK---GAYIHALDNGLFTLGAPHREVDEGPSPPEQFTAVKLSDSRIALKSGYGKY 83 (155)
T ss_dssp TTEEECSSGGGCCE-----EEEEECSS---SCBEEECTTSCEEECCCCSSSSCCCCTTTCEEEEECSSSCEEEEETTSCB
T ss_pred CcEEecCchhcCCC-----CEEEEeCC---CCEEEEEcCCcEEEccccccccCCCCCcceEEEEECCCCEEEEEeCCCCE
Confidence 88999999998875 57776665 899999998832 2222378999999999999999999999999999
Q ss_pred EEeecCCCCceEEEeecCCCCCceEEEEEeCCCCceEEEEecCCceEEecccceeecCCCC
Q 009475 122 IGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS 182 (534)
Q Consensus 122 v~~~~~g~~~~~~a~~~~~~~~EtF~ivr~~~~~~~v~i~~~nG~~Lq~~g~~~v~ad~~~ 182 (534)
++++.. | .|+|++++++++|+|+++.. ++ ++.|++.||+||.++....+.|+...
T Consensus 84 Ls~~~~--G-~v~a~a~~~g~~E~F~l~~~-~G--~~aLra~nG~yl~~~~~g~l~a~a~~ 138 (155)
T 2yug_A 84 LGINSD--G-LVVGRSDAIGPREQWEPVFQ-DG--KMALLASNSCFIRCNEAGDIEAKNKT 138 (155)
T ss_dssp EEECSS--S-BEEECCSSCCTTTBEEEECS-TT--CCEEEETTSCBEEECSSSCEEECCSC
T ss_pred EEecCC--C-cEEeccCCCCCCCEEEEEEE-CC--EEEEEeCCCCEEEEcCCCcEEEecCC
Confidence 999975 3 69999999999999999998 54 58899999999999876667887765
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.3e-16 Score=158.79 Aligned_cols=253 Identities=15% Similarity=0.132 Sum_probs=154.0
Q ss_pred hhhhhhccCCCCCH-----HHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCC-
Q 009475 217 PQVLQDHWDSYITD-----EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA- 290 (534)
Q Consensus 217 ~~~~~~hw~~~ite-----~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~- 290 (534)
-..+++||.+|+++ ++++.||++|+|+||||+ | .+|.++ ...++++++++++|+++||+|+||+|.
T Consensus 12 ~~~~e~~g~~~~~~~G~~~d~~~ilk~~G~N~VRi~~--w--~~P~~g----~~~~~~~~~~~~~A~~~GlkV~ld~Hys 83 (332)
T 1hjs_A 12 VVVEERAGVSYKNTNGNAQPLENILAANGVNTVRQRV--W--VNPADG----NYNLDYNIAIAKRAKAAGLGVYIDFHYS 83 (332)
T ss_dssp HHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEE--C--SSCTTC----TTSHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHcCCEEECCCCCcccHHHHHHHCCCCEEEEee--e--eCCCCC----cCCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 35689999999997 889999999999999998 3 344321 126899999999999999999999997
Q ss_pred ----CCCCCCCCCCCCCCCCCCCCCh---hhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCC-------CCChHHHH
Q 009475 291 ----APGSQNGNEHSATRDGFQEWGD---SNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP-------GVALDTLK 355 (534)
Q Consensus 291 ----~pG~qng~~~sg~~~g~~~W~~---~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~-------~~~~~~~~ 355 (534)
.|++|+. ...|.. ...+...++-+.++++++... .+..+.+.||+... ....+.+.
T Consensus 84 d~WadPg~Q~~---------p~~W~~~~~~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~ 154 (332)
T 1hjs_A 84 DTWADPAHQTM---------PAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIA 154 (332)
T ss_dssp SSCCBTTBCBC---------CTTCCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHH
T ss_pred CCcCCccccCC---------ccccccchHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHH
Confidence 4666652 335642 223334444444445544321 12236677887641 12568899
Q ss_pred HHHHHHHHHHHhcC--CceEEEEeCCCCCCCh---hhhhc----cc--CCCceEEEEEeecccCCCCCCCCchhhhHHHH
Q 009475 356 SYYKAGYDAVRKYT--STAYVIMSNRLGPADH---KELLS----FA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYV 424 (534)
Q Consensus 356 ~~~~~~~~aIR~~~--p~~~Iiv~~~~~~~~~---~~~~~----~~--~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i 424 (534)
+++++++++||+++ |+..|+++...+ .+. ..+++ .. ....--|+.+|+|..|... .+. +.+
T Consensus 155 ~l~~~~~~avR~~~~~p~~~v~ih~~~~-~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~---~~~----~~l 226 (332)
T 1hjs_A 155 RLLHSAAWGIKDSSLSPKPKIMIHLDNG-WDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSS---ATL----SAL 226 (332)
T ss_dssp HHHHHHHHHHHTSCCSSCCEEEEEESCT-TCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTT---CCH----HHH
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEeCCc-cchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCC---CCH----HHH
Confidence 99999999999999 988888864322 121 11211 10 1126779999988654311 122 222
Q ss_pred HhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcC
Q 009475 425 NNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRA 504 (534)
Q Consensus 425 ~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~ 504 (534)
.. .+..+.+..++++++-|-.-. ++|.. .++.+++=. ..-..+.+..++|+++.+++.++.
T Consensus 227 ~~----~l~~~~~rygKpv~v~EtG~~-~~~~~-----------~~~~~~~~~---~~~~~s~~~Qa~~l~~~~~~~~~~ 287 (332)
T 1hjs_A 227 KS----SLDNMAKTWNKEIAVVETNWP-ISCPN-----------PRYSFPSDV---KNIPFSPEGQTTFITNVANIVSSV 287 (332)
T ss_dssp HH----HHHHHHHHHCCEEEEEECCCC-SBCSS-----------CSSCCCGGG---TTSCSSHHHHHHHHHHHHHHHHTS
T ss_pred HH----HHHHHHHHHCCCEEEEEccCc-cCCCC-----------Ccccccccc---cCCCCCHHHHHHHHHHHHHHHHhc
Confidence 21 122333223445555663322 12210 011111100 111346778889999999998875
Q ss_pred --CCcEEEEcc
Q 009475 505 --TFGWAYWAH 513 (534)
Q Consensus 505 --~~GW~fWt~ 513 (534)
+.|-+||..
T Consensus 288 ~~~~G~fyWep 298 (332)
T 1hjs_A 288 SRGVGLFYWEP 298 (332)
T ss_dssp TTEEEEEEECT
T ss_pred CCeEEEEEEcc
Confidence 568899973
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=170.98 Aligned_cols=111 Identities=17% Similarity=0.192 Sum_probs=93.5
Q ss_pred ceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCce
Q 009475 66 TQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSET 145 (534)
Q Consensus 66 ~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~Et 145 (534)
.+|+||| .+|+|||+++++|..++++|+.++.||+|+|++ ++++|+||+.||+||+++++ + .|+||++.|++||+
T Consensus 219 g~vAlks-~~GkYL~~~g~~g~L~~~~~~~~g~~E~F~L~~-~~~qVaL~s~ngkyVsa~~g--g-~l~An~~~~~~~Et 293 (493)
T 3llp_A 219 GKVAFRD-CEGRYLAPSGPSGTLKAGKATKVGKDELFALEQ-SCAQVVLQAANERNVSTRQG--M-DLSANQDEETDQET 293 (493)
T ss_dssp -CEEEEC-TTSCBEEEETTTTEEEECC---CCGGGCEEEEE-CCCEEEEECTTSCEEECC-C--C-CCEEEESCCSGGGC
T ss_pred CEEEEEe-CCCCEEeEECCCCeEEeccCCCCCCceEEEEEe-CCCEEEEEecCCcEEEecCC--c-eEEeeCCCCCCcEE
Confidence 6899999 999999999887766668999999999999998 78999999999999999974 3 59999999999999
Q ss_pred EEEEEeCCCCceEEEEecCCceEEecccceeecCCCC
Q 009475 146 FQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS 182 (534)
Q Consensus 146 F~ivr~~~~~~~v~i~~~nG~~Lq~~g~~~v~ad~~~ 182 (534)
|+++++.++ .++.+|+.+|+||.+.+...|.++...
T Consensus 294 Fql~~~~~~-~~vaLRs~~GkYl~~~~~g~v~a~~~~ 329 (493)
T 3llp_A 294 FQLEIDRDT-KKCAFRTHTGKYWTLTATGGVQSTASS 329 (493)
T ss_dssp EEEEECTTT-CCEEEECTTSCEEEECTTSBEEEEESS
T ss_pred EEEEEeCCC-CEEEEEeCCCCEEEEeCCCcEEeccCC
Confidence 999998753 479999999999998876666665554
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=6.1e-15 Score=154.85 Aligned_cols=248 Identities=17% Similarity=0.213 Sum_probs=154.7
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCC--CCCCCCCc--hHHHHHHHHHHHHHCCCEEEEEcCC-----CCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPT--PPKPFVGG--SSKVLDNAFDWAEKYGVKVIVDLHA-----APGSQNGNEH 300 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~--~~~~~~~~--~l~~ld~~v~~a~~~Gl~VIlDlH~-----~pG~qng~~~ 300 (534)
+++++.||++|+|+|||++ | .+|. ++.+|.++ .++++.+++++|+++||+||||+|- .|+.|+.
T Consensus 51 ~d~~~ilk~~G~N~VRlrv--w--v~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~--- 123 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRI--W--NDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKA--- 123 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEE--C--SCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCC---
T ss_pred chHHHHHHHCCCCEEEEee--e--cCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccC---
Confidence 5789999999999999998 4 2332 34456544 4999999999999999999999995 3665542
Q ss_pred CCCCCCCCCCC----hhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCCC---CChHHHHHHHHHHHHHHHhcCCce
Q 009475 301 SATRDGFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG---VALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 301 sg~~~g~~~W~----~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~~---~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
...|. +...+.+.+.-+.++++++++. .+-.+++.||+.... ...+.+.+++.+++++||+++|+.
T Consensus 124 ------P~aW~~~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~ 197 (399)
T 1ur4_A 124 ------PKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNI 197 (399)
T ss_dssp ------CGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTS
T ss_pred ------ccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCC
Confidence 22465 2333445556667777777654 345789999998622 246788999999999999999999
Q ss_pred EEEEeCCCCCCC--hhhhhcc--cCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeec
Q 009475 373 YVIMSNRLGPAD--HKELLSF--ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKS 448 (534)
Q Consensus 373 ~Iiv~~~~~~~~--~~~~~~~--~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEw 448 (534)
.|+++....... ...+++. ....+--|+.+|+|..|. .+ ++.+.. .+..+.+..++++++-|.
T Consensus 198 ~V~ih~~~~~~~~~~~~~~d~l~~~g~d~DvIG~syYp~W~-----~~----l~~l~~----~l~~l~~rygKpV~v~Et 264 (399)
T 1ur4_A 198 LVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWH-----GT----LKNLTS----VLTSVADTYGKKVMVAET 264 (399)
T ss_dssp EEEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTS-----CC----HHHHHH----HHHHHHHHHCCEEEEEEE
T ss_pred eEEEEeCCCcchHHHHHHHHHHHHcCCCcCeEeEecCccch-----hh----HHHHHH----HHHHHHHHhCCcEEEEEe
Confidence 888864222111 1122121 123457799999995443 12 222211 222332222445566664
Q ss_pred ccchh--hhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcC---CCcEEEEc--ccc
Q 009475 449 VTSAL--ICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRA---TFGWAYWA--HKC 515 (534)
Q Consensus 449 s~a~t--dc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~---~~GW~fWt--~K~ 515 (534)
.-..+ +|.. .++.+++ +.+...-..+.+..++|+++.+++..+. +.|-+||. |-.
T Consensus 265 G~~~~~~~~d~-----------~~n~~~~-~~~~~~~~~s~~gQa~~l~~l~~~v~~~~~~g~GvfyWep~w~~ 326 (399)
T 1ur4_A 265 SYTYTAEDGDG-----------HGNTAPK-NGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIP 326 (399)
T ss_dssp CCCSCSCCSSS-----------SCCSSSC-TTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEECTTCCC
T ss_pred cCCccCCCCCC-----------ccccccc-ccccCCCCCCHHHHHHHHHHHHHHHHhccCceEEEEEEccceec
Confidence 33221 1111 1122321 1111112356788899999999988865 46899997 554
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-12 Score=145.19 Aligned_cols=222 Identities=14% Similarity=0.145 Sum_probs=137.7
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.|++.||++|+|+||+. +. |.. ++++++|.++||+|+.|+|...- . ....
T Consensus 347 ~~d~~~~k~~G~N~vR~~-----h~------p~~-------~~~~~~cD~~Gi~V~~e~~~~~~----------~-~~~~ 397 (613)
T 3hn3_A 347 VKDFNLLRWLGANAFRTS-----HY------PYA-------EEVMQMCDRYGIVVIDECPGVGL----------A-LPQF 397 (613)
T ss_dssp HHHHHHHHHHTCCEEECT-----TS------CCC-------HHHHHHHHHHTCEEEEECSCBCC----------C-SGGG
T ss_pred HHHHHHHHHcCCCEEEcc-----CC------CCh-------HHHHHHHHHCCCEEEEecccccc----------c-cccc
Confidence 578999999999999982 11 111 46899999999999999985310 0 0112
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhh
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 389 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~ 389 (534)
|.+...+.+.+.++.+++|++++|+|++|++.|||... .+....+++++++.||+.||+++|....... .....
T Consensus 398 ~~~~~~~~~~~~~~~~v~r~~nhPSIi~W~~~NE~~~~---~~~~~~~~~~l~~~~k~~DptRpv~~~~~~~-~~~~~-- 471 (613)
T 3hn3_A 398 FNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASH---LESAGYYLKMVIAHTKSLDPSRPVTFVSNSN-YAADK-- 471 (613)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCTT---SHHHHHHHHHHHHHHHHHCTTSCEEEEECSC-TTTCS--
T ss_pred cChHHHHHHHHHHHHHHHHhCCCCeEEEEecccCcccc---cchHHHHHHHHHHHHHHhCCCCCEEEEcccC-ccccc--
Confidence 33556677889999999999999999999999999742 3457889999999999999999999842111 11011
Q ss_pred cccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccc
Q 009475 390 SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLW 469 (534)
Q Consensus 390 ~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~ 469 (534)
......++++|.|..|-....+ .+.....+ ...+.......++++++.|+.....
T Consensus 472 ---~~~~~Dv~~~n~Y~~wy~~~~~--~~~~~~~l----~~~~~~~~~~~~kPi~isE~G~~~~---------------- 526 (613)
T 3hn3_A 472 ---GAPYVDVICLNSYYSWYHDYGH--LELIQLQL----ATQFENWYKKYQKPIIQSEYGAETI---------------- 526 (613)
T ss_dssp ---SGGGCSSEEEECCBTTTBSTTC--GGGHHHHH----HHHHHHHHHHHCSCEEEEECCCCBC----------------
T ss_pred ---cccccceeEEeccccccCCCcc--HHHHHHHH----HHHHHHHHHhcCCCEEEEeeCCCCC----------------
Confidence 1122357899999765321111 11111111 1111111111133466566544321
Q ss_pred cccccccccccCCCcccHHHHHHHHHHHHHHHhc----CCCcEEEEccccC
Q 009475 470 LNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR----ATFGWAYWAHKCE 516 (534)
Q Consensus 470 ~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~----~~~GW~fWt~K~~ 516 (534)
.|..+. ....-+.+....|++.+++++.+ .-+|++.|++..-
T Consensus 527 ---~g~~~~--~~~~~seeyQ~~~~~~~~~~~~~~~~~~~~G~~~W~~~Df 572 (613)
T 3hn3_A 527 ---AGFHQD--PPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADF 572 (613)
T ss_dssp ---TTCCCS--SCCTBSHHHHHHHHHHHHHHHHTTTTTTEEEEEESCSBCB
T ss_pred ---CCcccC--CCCCCCHHHHHHHHHHHHHHHHhhcccceEEEEEEEeeec
Confidence 011000 00011244556788888888865 3569999999873
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=99.43 E-value=6.1e-12 Score=129.57 Aligned_cols=244 Identities=16% Similarity=0.183 Sum_probs=148.0
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+++++.||++|+|+|||.| | .+|.++ . ..++.++++++.|+++||+|+||+|..+-... .+.......
T Consensus 30 ~~~~~ilk~~G~n~vRlri--~--v~P~~g-~---~d~~~~~~~~~~ak~~Gl~v~ld~hysd~wad----P~~q~~p~~ 97 (334)
T 1fob_A 30 QALETILADAGINSIRQRV--W--VNPSDG-S---YDLDYNLELAKRVKAAGMSLYLDLHLSDTWAD----PSDQTTPSG 97 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE--C--SCCTTC-T---TCHHHHHHHHHHHHHTTCEEEEEECCSSSCCB----TTBCBCCTT
T ss_pred chHHHHHHHcCCCEEEEEE--E--ECCCCC-c---cCHHHHHHHHHHHHHCCCEEEEEeccCCCCCC----cccccCccc
Confidence 5689999999999999966 3 345432 1 25899999999999999999999997421111 111112235
Q ss_pred CC----hhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCCCC-------ChHHHHHHHHHHHHHHHhcC--CceEEE
Q 009475 310 WG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPGV-------ALDTLKSYYKAGYDAVRKYT--STAYVI 375 (534)
Q Consensus 310 W~----~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~~~-------~~~~~~~~~~~~~~aIR~~~--p~~~Ii 375 (534)
|. +...+.+.++-+.+++++++.. .+..+.+.|||..... ..+.+.+++.+++++||+++ |+..|+
T Consensus 98 W~~~~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~ 177 (334)
T 1fob_A 98 WSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIM 177 (334)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEE
Confidence 65 2455667777788888888754 3445889999985211 35789999999999999999 987777
Q ss_pred EeCCCCCCChh---hhhc-cc-CC-C---ceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhh-hccCCCeEEE
Q 009475 376 MSNRLGPADHK---ELLS-FA-SG-L---SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAV-TTSNGPLTFV 445 (534)
Q Consensus 376 v~~~~~~~~~~---~~~~-~~-~~-~---~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~-~~~~gp~~~v 445 (534)
++-... .+.. .+.. .. .+ . .--++.+|+|..|.. ..+.+. +.. .+..+ .+. ++++++
T Consensus 178 ~h~~~~-~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~---~~~~~~----l~~----~l~~~~~ry-gKpv~i 244 (334)
T 1fob_A 178 IHLDDG-WSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSA---SATLAS----LKT----SLANLQSTY-DKPVVV 244 (334)
T ss_dssp EEESCT-TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCT---TCCHHH----HHH----HHHHHHHHH-CCCEEE
T ss_pred EEcCCc-CchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCC---CCCHHH----HHH----HHHHHHHHH-CCCEEE
Confidence 652211 1211 1111 00 11 1 568999998865431 112222 211 12222 233 444555
Q ss_pred eecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcC--CCcEEEEcc
Q 009475 446 GKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRA--TFGWAYWAH 513 (534)
Q Consensus 446 gEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~--~~GW~fWt~ 513 (534)
.|-.-+. +|.. ..+.+++=. ..-..+.+...+|+++.+++.++. ..|-+||+.
T Consensus 245 tEtG~~~-~~d~-----------~~~~~~~~~---~~~~~s~~~Q~~~l~~~~~~v~~~~~~~G~f~We~ 299 (334)
T 1fob_A 245 VETNWPV-SCPN-----------PAYAFPSDL---SSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEP 299 (334)
T ss_dssp EECCCCS-BCSS-----------CSSCCCGGG---TTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECT
T ss_pred EEccccc-CCCC-----------ccccccccc---cCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEECc
Confidence 6643321 2110 011121100 111345777889999999988764 568999986
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.8e-12 Score=143.24 Aligned_cols=120 Identities=23% Similarity=0.326 Sum_probs=88.8
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcC-CCCCC------
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH-AAPGS------ 294 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH-~~pG~------ 294 (534)
+||.....++|++.||++|+|+||+++..|...+|.++ .| .++.||++|+.|+++||+||++++ ..+..
T Consensus 9 e~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g-~~---d~~~ld~~ld~a~~~Gi~vil~~~~~~~P~Wl~~~~ 84 (645)
T 1kwg_A 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPG-RL---EWGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRY 84 (645)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTT-BC---CCHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHHC
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEeeechhhcCCCCC-cc---ChHHHHHHHHHHHHCCCEEEEeCCCCCCChhHhhcC
Confidence 35666677999999999999999999866777777654 45 367899999999999999999994 32210
Q ss_pred -------CCCCC-CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 295 -------QNGNE-HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 295 -------qng~~-~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
.+|.. ..|.+.. ..+. +...+.+.++++.|++||+++|.|++|++.|||..
T Consensus 85 P~~~~~~~~G~~~~~g~r~~-~~~~~p~~~~~~~~~~~~l~~ry~~~p~V~~w~i~NE~~~ 144 (645)
T 1kwg_A 85 PEILPVDREGRRRRFGGRRH-YCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGC 144 (645)
T ss_dssp GGGSCBCTTSCBCCSSSSCC-CCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTT
T ss_pred CceeeeCCCCcCcccCcccc-CCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcCCC
Confidence 01100 0111110 1112 56788899999999999999999999999999975
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=99.32 E-value=8.2e-11 Score=130.40 Aligned_cols=231 Identities=19% Similarity=0.228 Sum_probs=138.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCC---CCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN---GNEHSATRDG 306 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qn---g~~~sg~~~g 306 (534)
+.|++.||++|+|+||+.- . |.. +++++.|.++||+||.+++....... +++ .+.. .
T Consensus 314 ~~di~l~k~~g~N~vR~~h-----y------p~~-------~~~~~lcD~~Gi~V~~E~~~~g~~~~~~~~~~-~~~~-~ 373 (605)
T 3lpf_A 314 VHDHALMDWIGANSYRTSH-----Y------PYA-------EEMLDWADEHGIVVIDETAAVGFNLSLGIGFE-AGNK-P 373 (605)
T ss_dssp HHHHHHHHHHTCCEEEECS-----S------CCC-------HHHHHHHHHHTCEEEEECSCBCCCSSCCCSCC-CCCC-C
T ss_pred HHHHHHHHHCCCcEEEecC-----C------CCc-------HHHHHHHHhcCCEEEEeccccccccccccccc-cccC-c
Confidence 6789999999999999821 1 111 57889999999999999975421110 111 1100 0
Q ss_pred CCCCC-----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCC-C
Q 009475 307 FQEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-L 380 (534)
Q Consensus 307 ~~~W~-----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~-~ 380 (534)
...|. +...+.+.+.++.+.+|+++||+|++|.+.|||... .+....+++++++.+|+.||+++|..... +
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~NHPSIi~Ws~gNE~~~~---~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~ 450 (605)
T 3lpf_A 374 KELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTR---PQGAREYFAPLAEATRKLDPTRPITCVNVMF 450 (605)
T ss_dssp SCSSSTTTSCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCCC---STTHHHHHHHHHHHHHHHCSSSCEEEEEETT
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHcCCCCeEEEEecCcccccc---cchHHHHHHHHHHHHHHHCCCCcEEEecccc
Confidence 01121 355677889999999999999999999999999742 23346789999999999999999988632 1
Q ss_pred CCCChhhhhcccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhh-hccCCCeEEEeecccchhhhhhhh
Q 009475 381 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAV-TTSNGPLTFVGKSVTSALICKRCT 459 (534)
Q Consensus 381 ~~~~~~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~-~~~~gp~~~vgEws~a~tdc~~~~ 459 (534)
.......+.+ ---|+++|.|..+-.. ....+..-..+.. .+... .....| +++.|+.....
T Consensus 451 ~~~~~d~~~~-----~~Dvig~N~Y~gwY~~--~g~~~~~~~~l~~----~~~~w~~~~~KP-iiisEyGa~~~------ 512 (605)
T 3lpf_A 451 CDAHTDTISD-----LFDVLCLNRYYGWYVQ--SGDLETAEKVLEK----ELLAWQEKLHQP-IIITEYGVDTL------ 512 (605)
T ss_dssp SCTTTCSSGG-----GSSSEEEECCBTTTBS--TTCHHHHHHHHHH----HHHHHHHHHCCC-EEEEECCCCCC------
T ss_pred Cccccccccc-----ccceeeeccccccccC--CCchHHHHHHHHH----HHHHHhhccCCC-eEEEeeCCCCC------
Confidence 1111111111 2246778888654311 0111111111111 11111 112344 55566644321
Q ss_pred hhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCC--CcEEEEccccC
Q 009475 460 QIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRAT--FGWAYWAHKCE 516 (534)
Q Consensus 460 ~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~--~GW~fWt~K~~ 516 (534)
.|-.+. ....-+.+....|++.+++++++.. +|++.|+|..-
T Consensus 513 -------------~g~h~~--~~~~~sEeyq~~~~~~~~~~~~~~~~~~G~~iW~~~Df 556 (605)
T 3lpf_A 513 -------------AGLHSM--YTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADF 556 (605)
T ss_dssp -------------TTCCCS--SCCTTSHHHHHHHHHHHHHHHTTCTTEEEEEEEEEECB
T ss_pred -------------cCcccC--CCCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEeeee
Confidence 111110 0001134455688999999999844 79999998874
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.1e-11 Score=136.60 Aligned_cols=144 Identities=16% Similarity=0.253 Sum_probs=106.4
Q ss_pred ccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCC----------C
Q 009475 223 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA----------P 292 (534)
Q Consensus 223 hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~----------p 292 (534)
||.....++|++.||++|+|+||+++..|...+|.++ .| .++.||++|+.|+++||+|||.++.. |
T Consensus 19 ~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g-~~---~f~~ld~~i~~~~~~Gi~vil~~~~~~~P~Wl~~~~P 94 (675)
T 3tty_A 19 QWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEV-SY---DFTWLDDIIERLTKENIYLCLATSTGAHPAWMAKKYP 94 (675)
T ss_dssp GSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSS-CB---CCHHHHHHHHHHHHTTCEEEEECCTTSCCHHHHHHCG
T ss_pred hCCHHHHHHHHHHHHHcCCCEEEEeeechhhhCCcCC-cc---CHHHHHHHHHHHHHCCCEEEEeCCCCCCChhhhhcCC
Confidence 4555555899999999999999999866777777654 45 37899999999999999999998743 1
Q ss_pred CC----CCCCC-CCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC---ChHHHHHHHHHHHHH
Q 009475 293 GS----QNGNE-HSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTLKSYYKAGYDA 364 (534)
Q Consensus 293 G~----qng~~-~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~---~~~~~~~~~~~~~~a 364 (534)
.. .+|.. ..|.+.....-.+...+.+.++++.|++||+++|.|+++++.|||..... ..+.+++|+++.|..
T Consensus 95 e~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~Vi~w~v~NE~g~~~y~~~~~~~Fr~wLk~kY~t 174 (675)
T 3tty_A 95 DVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKDHPQIVMWHVSNEYGGYCYCDNCEKQFRVWLKERYGT 174 (675)
T ss_dssp GGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTTCTTEEEEECSSSCCCCCCSHHHHHHHHHHHHHHHSS
T ss_pred ceeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEEccccCCCcCCHHHHHHHHHHHHHHhcC
Confidence 10 11110 11222111111167888999999999999999999999999999985432 246788999998888
Q ss_pred HHhcCC
Q 009475 365 VRKYTS 370 (534)
Q Consensus 365 IR~~~p 370 (534)
|.+.+.
T Consensus 175 i~~LN~ 180 (675)
T 3tty_A 175 LEALNK 180 (675)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=132.73 Aligned_cols=140 Identities=15% Similarity=0.200 Sum_probs=102.8
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 301 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s 301 (534)
+||..+ ++|++.|+++|+|++|++|.|- ...|..+.++++..++.+|++|+.|.++||.+||+||+..-.+.-.
T Consensus 78 D~Y~~~--~eDi~lm~~~G~~~~R~si~W~-Ri~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l~--- 151 (468)
T 2j78_A 78 DHYNRW--KEDIEIIEKLGVKAYRFSISWP-RILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQ--- 151 (468)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHH-HHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH---
T ss_pred cccccC--HHHHHHHHHcCCCEEEeccCHH-HhCCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEEccCCCCchhhh---
Confidence 455444 8999999999999999999864 4556533577888999999999999999999999998652111000
Q ss_pred CCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHHH
Q 009475 302 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYKA 360 (534)
Q Consensus 302 g~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~~ 360 (534)
....|. +...+.+.++++.+++||++ .|..|.++|||.. ++. +. ..+.....+
T Consensus 152 ----~~ggw~~~~~~~~F~~ya~~~~~~~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~ 225 (468)
T 2j78_A 152 ----LKGGWANREIADWFAEYSRVLFENFGD--RVKNWITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHAR 225 (468)
T ss_dssp ----TTTGGGSTTHHHHHHHHHHHHHHHHTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ----hcCCCCChHHHHHHHHHHHHHHHHhCC--ccceEEEccccchhhccccccccCCCCcccHHHHHHHHHHHHHHHHH
Confidence 001354 57789999999999999999 4566899999973 111 11 123334577
Q ss_pred HHHHHHhcCCceE
Q 009475 361 GYDAVRKYTSTAY 373 (534)
Q Consensus 361 ~~~aIR~~~p~~~ 373 (534)
+++++|+.+|+..
T Consensus 226 Av~~~r~~~~~~~ 238 (468)
T 2j78_A 226 AVKVFRETVKDGK 238 (468)
T ss_dssp HHHHHHHHCTTCE
T ss_pred HHHHHHhhCCCCe
Confidence 8899999988744
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-10 Score=126.44 Aligned_cols=184 Identities=14% Similarity=0.117 Sum_probs=114.5
Q ss_pred CcchhhhhhccCCCCCHHHHHHHH-hCCccEEEeCccccccc---CCCCC-CCC-CCchHHHHHHHHHHHHHCCCEEEEE
Q 009475 214 DKAPQVLQDHWDSYITDEDFKFLS-SNGINAVRIPVGWWIAN---DPTPP-KPF-VGGSSKVLDNAFDWAEKYGVKVIVD 287 (534)
Q Consensus 214 ~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~VRIPv~~w~~~---~~~~~-~~~-~~~~l~~ld~~v~~a~~~Gl~VIlD 287 (534)
..+...+..++ +++++.|+ ++|+++||+++.|.... ...++ .+- ..-.+..+|+++++|+++||+++|.
T Consensus 25 g~~~~~~r~~~-----~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~~~~n~~~~D~~~~~~~~~Gi~p~v~ 99 (503)
T 1w91_A 25 GRLGLALQKEY-----LDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMKPFYNFTYIDRIVDSYLALNIRPFIE 99 (503)
T ss_dssp SCGGGGGBHHH-----HHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEEEEECCHHHHHHHHHHHHTTCEEEEE
T ss_pred ccchhhhCHHH-----HHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCceeeccHHHHHHHHHHHHCCCEEEEE
Confidence 34556677766 78999997 89999999998764211 11110 000 0013789999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCC-----hhhHHHHHHHHHHHH----HHhcCCCeEE--EEEeccCCCCCC----CChH
Q 009475 288 LHAAPGSQNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLA----ARYANRPSLA--AIELINEPLAPG----VALD 352 (534)
Q Consensus 288 lH~~pG~qng~~~sg~~~g~~~W~-----~~~~~~~~~~w~~lA----~ryk~~~~vl--g~eL~NEP~~~~----~~~~ 352 (534)
|++.|..-.. +.. ....|. +...+.+.++.+.++ +||++. .|- -||+.|||.... .+.+
T Consensus 100 l~~~P~~~~~----~~~-~~~~w~~~~~~p~~~~~~~~~v~~~~~~~~~ryg~~-~V~~W~wev~NEp~~~~~~~~~~~~ 173 (503)
T 1w91_A 100 FGFMPKALAS----GDQ-TVFYWKGNVTPPKDYNKWRDLIVAVVSHFIERYGIE-EVRTWLFEVWNEPNLVNFWKDANKQ 173 (503)
T ss_dssp ECSBCGGGBS----SCC-EETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHH-HHHTSEEEECSCTTSTTTSGGGCHH
T ss_pred EcCCcHHHhC----CCC-ceeecCCCCCCccCHHHHHHHHHHHHHHHHhhcCch-hhceeeEEEeeCCCCccCCCCCCHH
Confidence 9987653210 100 001121 345566665555555 555542 143 589999998631 2567
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEeCCCC-CCCh-hhhhccc--CCCceEEEEEeecccC
Q 009475 353 TLKSYYKAGYDAVRKYTSTAYVIMSNRLG-PADH-KELLSFA--SGLSRVVIDVHYYNLF 408 (534)
Q Consensus 353 ~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~-~~~~-~~~~~~~--~~~~nvv~d~H~Y~~f 408 (534)
.+.+++++++++||+++|+..|...+... ...+ ..++... .+..--++++|.|...
T Consensus 174 ~y~~~~~~~~~~ik~~~P~~~vggp~~~~~~~~w~~~~l~~~~~~g~~~D~is~H~Y~~~ 233 (503)
T 1w91_A 174 EYFKLYEVTARAVKSVDPHLQVGGPAICGGSDEWITDFLHFCAERRVPVDFVSRHAYTSK 233 (503)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEECSSCTHHHHHHHHHHHHTTCCCCEEEEEEECBC
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEeeeccCCchHHHHHHHHHHHhCCCCCCEEEEeecCCC
Confidence 78899999999999999998774322111 0111 2333311 2234568999999754
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.4e-11 Score=128.63 Aligned_cols=141 Identities=18% Similarity=0.285 Sum_probs=102.9
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 301 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s 301 (534)
+||..+ ++|++.|+++|+|++|++|.| ....|.+ ..+++..++.+|++|+.|.++||.+||+||+..-.+.-.+
T Consensus 47 d~Y~~~--~eDi~lm~~~G~~~~R~si~W-~ri~P~~-g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l~~-- 120 (423)
T 1vff_A 47 NHWELY--RDDIQLMTSLGYNAYRFSIEW-SRLFPEE-NKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWFMK-- 120 (423)
T ss_dssp CHHHHH--HHHHHHHHHHTCCEEEEECCH-HHHCSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHH--
T ss_pred cchhcc--HHHHHHHHHcCCCEEEeecCH-HHhCCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEccCCcccHHHHh--
Confidence 455544 899999999999999999976 4556655 5778889999999999999999999999997521100000
Q ss_pred CCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHHH
Q 009475 302 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYKA 360 (534)
Q Consensus 302 g~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~~ 360 (534)
...|. +...+.+.++++.+++||++ |..|+++|||.. ++. +. ..+......
T Consensus 121 -----~ggw~~~~~~~~f~~ya~~~~~r~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~ll~Aha~ 192 (423)
T 1vff_A 121 -----KGGFLREENLKHWEKYIEKVAELLEK---VKLVATFNEPMVYVMMGYLTAYWPPFIRSPFKAFKVAANLLKAHAI 192 (423)
T ss_dssp -----TTGGGSGGGHHHHHHHHHHHHHHTTT---CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -----cCCCCCHHHHHHHHHHHHHHHHHhCC---CceEEEecCcchhhhccccccccCCCccchHHHHHHHHHHHHHHHH
Confidence 01254 67889999999999999999 777999999973 111 11 122333466
Q ss_pred HHHHHHhcCCceEEEEe
Q 009475 361 GYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 361 ~~~aIR~~~p~~~Iiv~ 377 (534)
+++++|+ ++..-+++.
T Consensus 193 Av~~~r~-~~~iG~~~~ 208 (423)
T 1vff_A 193 AYELLHG-KFKVGIVKN 208 (423)
T ss_dssp HHHHHTT-TSEEEEEEE
T ss_pred HHHHHHh-cCceEEEEe
Confidence 7888888 555545544
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=9.1e-10 Score=119.93 Aligned_cols=151 Identities=18% Similarity=0.207 Sum_probs=99.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++|++.||++|+|+||+ | ..+|... . |++++.|.++|||||+++|.....-. + ..+.
T Consensus 90 ~rDi~LmK~~GiN~VRv----y-~~~P~~~------~----d~~ldl~~~~GIyVIle~~~p~~~i~-------~-~~P~ 146 (555)
T 2w61_A 90 LRDIPFLKMLGVNTLRV----Y-AIDPTKS------H----DICMEALSAEGMYVLLDLSEPDISIN-------R-ENPS 146 (555)
T ss_dssp HHHHHHHHHHTCSEEEE----C-CCCTTSC------C----HHHHHHHHHTTCEEEEESCBTTBSCC-------T-TSCC
T ss_pred HHHHHHHHHcCCCEEEE----e-ccCCCCC------h----HHHHHHHHhcCCEEEEeCCCCCcccc-------c-CCHH
Confidence 68999999999999999 3 2343221 1 78889999999999999986422111 1 1233
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC---ChHHHHHHHHHHHHHHHhcCCceEEEEeC-CCCCCCh
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPADH 385 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~~~~ 385 (534)
| .+..++..+.+++||+++|+|++|.+-||+..... ....++...+++.+.||+.+++. |.|+- ......+
T Consensus 147 ~----~~~~~~r~~~~V~ry~nhP~Vi~W~vGNE~~~~~~~~~~~~y~~aa~r~~~~~lk~~d~R~-IpVgy~~ad~~~~ 221 (555)
T 2w61_A 147 W----DVHIFERYKSVIDAMSSFPNLLGYFAGNQVTNDHTNTFASPFVKAAIRDAKEYISHSNHRK-IPVGYSTNDDAMT 221 (555)
T ss_dssp C----CHHHHHHHHHHHHHHTTCTTEEEEEEEESSSCSTTCGGGHHHHHHHHHHHHHHHHHSSSCC-CCEEEEECCCTTT
T ss_pred H----HHHHHHHHHHHHHHcCCCCcEEEEEeCccccCCCccchhhHHHHHHHHHHHHHHHhcCCCc-ceeeccccccchh
Confidence 4 34567788999999999999999999999986321 12456677788888888888654 33331 1111111
Q ss_pred -hhhhcccC--CCceEEEEEeecccC
Q 009475 386 -KELLSFAS--GLSRVVIDVHYYNLF 408 (534)
Q Consensus 386 -~~~~~~~~--~~~nvv~d~H~Y~~f 408 (534)
..+.++.. .....++.+|.|..+
T Consensus 222 r~~la~yl~c~~~~~D~~~~N~Y~w~ 247 (555)
T 2w61_A 222 RDNLARYFVCGDVKADFYGINMYEWC 247 (555)
T ss_dssp HHHHHHHTTBTTCCCSCEEEEECCCC
T ss_pred hHHHHHHhccCCCCcCEEEEeCCccc
Confidence 12222211 234568888999644
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.7e-11 Score=111.05 Aligned_cols=80 Identities=23% Similarity=0.312 Sum_probs=71.6
Q ss_pred cceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCc
Q 009475 65 GTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSE 144 (534)
Q Consensus 65 g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~E 144 (534)
++.|+|||. +|+||+++..| .|+|++++++.||+|++.+. +++++||+.||+||+++.. + .|.|++++++..|
T Consensus 71 ~~~v~LRs~-~GkYLs~~~~G--~v~a~a~~~g~~E~F~l~~~-~G~~aLra~nG~yl~~~~~--g-~l~a~a~~~~~~E 143 (155)
T 2yug_A 71 DSRIALKSG-YGKYLGINSDG--LVVGRSDAIGPREQWEPVFQ-DGKMALLASNSCFIRCNEA--G-DIEAKNKTAGEEE 143 (155)
T ss_dssp SSCEEEEET-TSCBEEECSSS--BEEECCSSCCTTTBEEEECS-TTCCEEEETTSCBEEECSS--S-CEEECCSCCCTTT
T ss_pred CCEEEEEeC-CCCEEEecCCC--cEEeccCCCCCCCEEEEEEE-CCEEEEEeCCCCEEEEcCC--C-cEEEecCCCCCCc
Confidence 369999995 69999999887 89999999999999999998 8999999999999999864 3 4999999999999
Q ss_pred eEEEEEe
Q 009475 145 TFQIVRK 151 (534)
Q Consensus 145 tF~ivr~ 151 (534)
+|.+--.
T Consensus 144 ~f~v~l~ 150 (155)
T 2yug_A 144 MIKIRSC 150 (155)
T ss_dssp CCEEEEC
T ss_pred EEEEEEe
Confidence 9987543
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.19 E-value=5.7e-11 Score=127.59 Aligned_cols=146 Identities=18% Similarity=0.223 Sum_probs=105.3
Q ss_pred hhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCC
Q 009475 218 QVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN 296 (534)
Q Consensus 218 ~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qn 296 (534)
.+--+||..+ ++|++.|+++|+|++|++|.| ....|.. ..++.+..++.+|++|+.|.++||.+||+||+..-.+.
T Consensus 64 ~~a~D~Y~~~--~eDi~lm~~~G~~~~R~sisW-~Ri~P~G~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~ 140 (479)
T 2xhy_A 64 HEAVDFYGHY--KEDIKLFAEMGFKCFRTSIAW-TRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLH 140 (479)
T ss_dssp HHTTCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH
T ss_pred cccccchhhh--HHHHHHHHHcCCCEEEeeCCH-HHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCHH
Confidence 3444566655 899999999999999999986 4445543 34566789999999999999999999999997532110
Q ss_pred CCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-------------C-Ch----------
Q 009475 297 GNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-------------V-AL---------- 351 (534)
Q Consensus 297 g~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~-------------~-~~---------- 351 (534)
-. +....|. +...+.+.++|+.+++||++. |..|.++|||.... . .+
T Consensus 141 l~------~~~ggw~~~~~~~~F~~ya~~~~~~~gd~--V~~w~t~NEp~~~~~~~~gy~~~~~~G~~~Pg~~~~~~~~~ 212 (479)
T 2xhy_A 141 LV------QQYGSWTNRKVVDFFVRFAEVVFERYKHK--VKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMY 212 (479)
T ss_dssp HH------HHSCGGGSTHHHHHHHHHHHHHHHHTTTT--CCEEEEETTTTGGGSTTSTTHHHHHHSCCGGGSSSHHHHHH
T ss_pred HH------hhcCCCCCHHHHHHHHHHHHHHHHHhCCC--CCcEEEecCcchhhhccccccccccccccCCCccccHHHHH
Confidence 00 0012354 678899999999999999995 55688999997531 0 00
Q ss_pred ---HHHHHHHHHHHHHHHhcCCceEE
Q 009475 352 ---DTLKSYYKAGYDAVRKYTSTAYV 374 (534)
Q Consensus 352 ---~~~~~~~~~~~~aIR~~~p~~~I 374 (534)
..+.....++++++|+.+|+..|
T Consensus 213 ~a~h~~llAha~Av~~~r~~~~~~~I 238 (479)
T 2xhy_A 213 QVLHHQFVASALAVKAARRINPEMKV 238 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 01223345788999999887554
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.2e-10 Score=124.02 Aligned_cols=190 Identities=14% Similarity=0.117 Sum_probs=114.8
Q ss_pred CCCcchhhhhhccCCCCCHHHHHHHH-hCCccEEEeCccccccc---CCCC---CCCCCCchHHHHHHHHHHHHHCCCEE
Q 009475 212 GPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAVRIPVGWWIAN---DPTP---PKPFVGGSSKVLDNAFDWAEKYGVKV 284 (534)
Q Consensus 212 G~~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~VRIPv~~w~~~---~~~~---~~~~~~~~l~~ld~~v~~a~~~Gl~V 284 (534)
|...+...+..++ ++|++.|+ ++|+++||+++.|.... ...+ ... ..-.+..+|+++++|+++||++
T Consensus 23 g~~~~~~~~~~~~-----~e~l~~~~~~~G~~~vR~~~~w~~~~~~~~~~~~~~~g~-~~~~~~~~D~~~~~~~~~Gi~p 96 (500)
T 1uhv_A 23 GTGRLGLALQKEY-----IETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVK-PFYNFTYIDRIFDSFLEIGIRP 96 (500)
T ss_dssp ECSCGGGGGBHHH-----HHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEE-EEECCHHHHHHHHHHHHHTCEE
T ss_pred ccccchhhhCHHH-----HHHHHHHHHhcCceEEEEecCcCCCceeeecccccCCCc-eEEehhHHHHHHHHHHHCCCEE
Confidence 3334555666666 78999998 99999999998774200 0001 100 0013789999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHH----HhcCCCeEE--EEEeccCCCCCC----CChHH
Q 009475 285 IVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA----RYANRPSLA--AIELINEPLAPG----VALDT 353 (534)
Q Consensus 285 IlDlH~~pG~qng~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~----ryk~~~~vl--g~eL~NEP~~~~----~~~~~ 353 (534)
+|.|++.|..-....... ..-...+. +...+.+.++.+.+++ ||++. .|- -||++|||.... .+.+.
T Consensus 97 ~v~l~~~P~~~~~~~~~~-~~~~~~~~~p~~~~~w~~~~~~~~~~~~~ryg~~-~V~~W~~~~~NEpn~~~~~~~~~~~~ 174 (500)
T 1uhv_A 97 FVEIGFMPKKLASGTQTV-FYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIE-EVLKWPFEIWNEPNLKEFWKDADEKE 174 (500)
T ss_dssp CEEECCCCTTTBSSCCEE-TTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHH-HHTTCCEEESSCTTSTTTSGGGCHHH
T ss_pred EEEEccChHHHhCCCCce-eecCCCCCCCcCHHHHHHHHHHHHHHHHHhcCcc-ceeeeeEEEeeCCCCcccCCCCCHHH
Confidence 999998876432100000 00000011 3445666666666555 55442 133 479999998521 25667
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEeCCCC-CCCh-hhhhccc--CCCceEEEEEeecccCC
Q 009475 354 LKSYYKAGYDAVRKYTSTAYVIMSNRLG-PADH-KELLSFA--SGLSRVVIDVHYYNLFS 409 (534)
Q Consensus 354 ~~~~~~~~~~aIR~~~p~~~Iiv~~~~~-~~~~-~~~~~~~--~~~~nvv~d~H~Y~~f~ 409 (534)
+.+++..++++||+++|+..|....... ...+ ..++... .+..--++++|.|....
T Consensus 175 y~~~~~~~~~~ik~~~P~~~vggp~~~~~~~~w~~~~l~~~~~~~~~~D~is~H~Y~~~~ 234 (500)
T 1uhv_A 175 YFKLYKVTAKAIKEVNENLKVGGPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSKQ 234 (500)
T ss_dssp HHHHHHHHHHHHHHHCTTSCEEEEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEECcccCCCchHHHHHHHHHHHhCCCCCcEEEEeecCCCc
Confidence 8889999999999999997764322111 1111 2333221 12234589999997643
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=99.14 E-value=6.5e-11 Score=125.55 Aligned_cols=141 Identities=21% Similarity=0.271 Sum_probs=103.7
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..+ ++|++.|+++|+|++|++|.| ....|.+..++++..++.++++|+.|.++||.+||+||+..-.+.-
T Consensus 53 ~D~Y~~~--~eDi~lm~~~G~~~~R~si~W-~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~H~d~P~~l--- 126 (431)
T 1ug6_A 53 CDHYRRY--EEDIALMQSLGVRAYRFSVAW-PRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLAL--- 126 (431)
T ss_dssp TCHHHHH--HHHHHHHHHHTCCEEEEECCH-HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH---
T ss_pred ccchhhh--HHHHHHHHHcCCCEEEcccCH-HHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCcch---
Confidence 3455555 899999999999999999986 4555654357788899999999999999999999999975211100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~ 359 (534)
.....|. +...+.+.++++.+++||++. |..|.++|||.. ++. +. ..+.....
T Consensus 127 ----~~~ggw~~~~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha 200 (431)
T 1ug6_A 127 ----EERGGWRSRETAFAFAEYAEAVARALADR--VPFFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHG 200 (431)
T ss_dssp ----HTTTGGGSHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ----hhcCCCCChHHHHHHHHHHHHHHHHhcCC--CceEEEecCcchhhccccccccCCCCccchHHHHHHHHHHHHHHH
Confidence 0012354 677899999999999999996 557899999974 111 11 12233457
Q ss_pred HHHHHHHhcCCceEE
Q 009475 360 AGYDAVRKYTSTAYV 374 (534)
Q Consensus 360 ~~~~aIR~~~p~~~I 374 (534)
++++++|+ +|+..|
T Consensus 201 ~Av~~~r~-~~~~~i 214 (431)
T 1ug6_A 201 LAVEALRA-AGARRV 214 (431)
T ss_dssp HHHHHHHH-TTCSEE
T ss_pred HHHHHHHh-cCCCeE
Confidence 78999999 887443
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.13 E-value=4.5e-09 Score=117.91 Aligned_cols=136 Identities=16% Similarity=0.191 Sum_probs=101.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.|++.||++|+|+||+. +. | + + +++++.|.++||+|+.++..... . ..
T Consensus 321 ~~dl~l~k~~G~N~iR~~----h~--p--~-~---------~~~~dlcDe~Gi~V~~E~~~~~~----------~-~~-- 369 (692)
T 3fn9_A 321 DFDLAAIMDVGATTVRFA----HY--Q--Q-S---------DYLYSRCDTLGLIIWAEIPCVNR----------V-TG-- 369 (692)
T ss_dssp HHHHHHHHHHTCCEEEET----TS--C--C-C---------HHHHHHHHHHTCEEEEECCCBSC----------C-CS--
T ss_pred HHHHHHHHHCCCCEEEec----CC--C--C-c---------HHHHHHHHHCCCEEEEcccccCC----------C-CC--
Confidence 578999999999999993 11 1 1 1 78899999999999999853210 0 11
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhh
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 389 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~ 389 (534)
+. .+...+.++.+.+|++++|+|++|.+.|||... .+....+++++++.+|+.||+++|..+..+...+ ..
T Consensus 370 --~~-~~~~~~~~~~~v~r~rNHPSIi~Ws~gNE~~~~---~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~~-~~-- 440 (692)
T 3fn9_A 370 --YE-TENAQSQLRELIRQSFNHPSIYVWGLHNEVYQP---HEYTAALTRSLHDLAKTEDPDRYTVSVNGYGHMD-HP-- 440 (692)
T ss_dssp --SC-HHHHHHHHHHHHHHHTTCTTEEEEEEEESCCSS---HHHHHHHHHHHHHHHHHHCTTSEEEEEESSSCTT-CT--
T ss_pred --HH-HHHHHHHHHHHHHHhcCCCcceEEEeccccCcc---cccHHHHHHHHHHHHHHHCCCCCEEEeCCCcccc-cc--
Confidence 23 677888999999999999999999999999752 3556789999999999999999999875432111 01
Q ss_pred cccCCCceEEEEEeecccC
Q 009475 390 SFASGLSRVVIDVHYYNLF 408 (534)
Q Consensus 390 ~~~~~~~nvv~d~H~Y~~f 408 (534)
....--|+++|.|..|
T Consensus 441 ---~~~~~Dv~~~n~Y~gW 456 (692)
T 3fn9_A 441 ---VNLNADIQGMNRYFGW 456 (692)
T ss_dssp ---TCSSSSEEEEECCBTT
T ss_pred ---ccccCCcccccccccc
Confidence 1122457889988654
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.3e-10 Score=123.71 Aligned_cols=145 Identities=15% Similarity=0.201 Sum_probs=107.4
Q ss_pred hhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 220 ~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
--+||+.| ++|++.|+++|+|++|+.|.| ....|..+..+++..++.+|++|+.|.++||.+||+||+..-.+.-
T Consensus 53 a~d~Y~~~--~eDi~lm~~~G~~~~R~si~W-~ri~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~h~d~P~~l-- 127 (449)
T 1qox_A 53 ACDSYHRV--EEDVQLLKDLGVKVYRFSISW-PRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQAL-- 127 (449)
T ss_dssp TTCTTSCH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH--
T ss_pred ccchhhhh--HHHHHHHHhcCCCeEEecCcH-HHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeCCCcccHHH--
Confidence 35677766 899999999999999999976 4556653346788899999999999999999999999865211100
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHH
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYY 358 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~ 358 (534)
.....|. +...+.+.++.+.+++||+++ |..|.++|||.. ++. +. ..+....
T Consensus 128 -----~~~ggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAh 200 (449)
T 1qox_A 128 -----QDQGGWGSRITIDAFAEYAELMFKELGGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAH 200 (449)
T ss_dssp -----HTTTGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred -----HhcCCCCCchHHHHHHHHHHHHHHHhCCC--CceEEEccCCcceeccccccCccCCCcccHHHHHHHHHHHHHHH
Confidence 0011344 578899999999999999997 677899999973 111 11 1223345
Q ss_pred HHHHHHHHhcCCceEEEE
Q 009475 359 KAGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 359 ~~~~~aIR~~~p~~~Iiv 376 (534)
..+++++|+..|+..|-+
T Consensus 201 a~Av~~~r~~~~~~~IGi 218 (449)
T 1qox_A 201 GRAVTLFRELGISGEIGI 218 (449)
T ss_dssp HHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHhCCCceEEE
Confidence 778899999988754443
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-10 Score=124.30 Aligned_cols=142 Identities=18% Similarity=0.259 Sum_probs=105.0
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.|+++|+|++|+.|.| ....|..+..+++..++.+|++|+.|.++||.+||+||+..-.+.-
T Consensus 55 ~d~Y~~~--~eDi~lm~~~G~~~~R~si~W-sri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~h~d~P~~l--- 128 (453)
T 3ahx_A 55 CDHYHRY--KEDVQLLKSLGIKSYRFSIAW-PRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQKL--- 128 (453)
T ss_dssp TCHHHHH--HHHHHHHHHTTCCEEEEECCH-HHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH---
T ss_pred ccHHHHH--HHHHHHHHHhCCCeEecccCH-HHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCccHhH---
Confidence 3455555 899999999999999999975 5566663346788899999999999999999999999865211100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~ 359 (534)
.....|. +...+.+.++++.+++||++. |..|.++|||.. ++. +. ..+.....
T Consensus 129 ----~~~ggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha 202 (453)
T 3ahx_A 129 ----QDIGGWANPQVADYYVDYANLLFREFGDR--VKTWITHNEPWVASYLGYALGVHAPGIKDMKMALLAAHNILLSHF 202 (453)
T ss_dssp ----HTTTGGGSHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ----hhCCCCCCchHHHHHHHHHHHHHHHhCCc--cceEEEccCcchhhccccccCcCCCCcccHHHHHHHHHHHHHHHH
Confidence 0012354 677899999999999999997 677899999973 111 11 12223356
Q ss_pred HHHHHHHhcCCceEE
Q 009475 360 AGYDAVRKYTSTAYV 374 (534)
Q Consensus 360 ~~~~aIR~~~p~~~I 374 (534)
.+++++|+.+|+..|
T Consensus 203 ~Av~~~r~~~~~~~I 217 (453)
T 3ahx_A 203 KAVKAYRELEQDGQI 217 (453)
T ss_dssp HHHHHHHHTCCSCEE
T ss_pred HHHHHHHhhCCCCeE
Confidence 788999999887543
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=123.90 Aligned_cols=144 Identities=17% Similarity=0.275 Sum_probs=106.1
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..+ ++|++.|+++|+|++|+.|.| ....|..+..+++..++.++++|+.|.++||.+||+||+..-.+.-
T Consensus 54 ~d~Yh~y--~eDi~lm~~~G~~~~R~si~W-~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~l--- 127 (447)
T 1e4i_A 54 CDSYHRY--EEDIRLMKELGIRTYRFSVSW-PRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQAL--- 127 (447)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH---
T ss_pred cchhhcc--HHHHHHHHHcCCCeEEecCcH-HHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccHHH---
Confidence 3455555 899999999999999999976 4556653357788899999999999999999999999865211100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~ 359 (534)
.....|. +...+.+.++++.+++||++. |..|.++|||.. ++. +. ..+.....
T Consensus 128 ----~~~ggw~~r~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha 201 (447)
T 1e4i_A 128 ----QDAGGWGNRRTIQAFVQFAETMFREFHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHG 201 (447)
T ss_dssp ----HHTTTTSSTHHHHHHHHHHHHHHHHTBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ----HhcCCCCCchhHHHHHHHHHHHHHHhCCc--ceeEEEecCccccccccccccccCCCccchHHHHHHHHHHHHHHH
Confidence 0011354 577899999999999999997 777999999973 111 11 12233457
Q ss_pred HHHHHHHhcCCceEEEE
Q 009475 360 AGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv 376 (534)
++++++|+.+|+..|-+
T Consensus 202 ~Av~~~r~~~~~~~IGi 218 (447)
T 1e4i_A 202 LSVRRFRELGTSGQIGI 218 (447)
T ss_dssp HHHHHHHHHTCSSEEEE
T ss_pred HHHHHHHHhCCCCeEEE
Confidence 78999999988754433
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-10 Score=122.57 Aligned_cols=141 Identities=17% Similarity=0.226 Sum_probs=103.7
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..+ ++|++.|+++|+|++|+.|.| ....|.+ ..+++..++.+|++|+.|.++||.+||+||+..-.+.-
T Consensus 63 ~D~Y~~~--~eDi~lm~~~G~~~~R~sisW-sRi~P~~-g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~L--- 135 (454)
T 2o9p_A 63 CDHFHHF--KEDVQLMKQLGFLHYRFSVAW-PRIMPAA-GIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWI--- 135 (454)
T ss_dssp TCHHHHH--HHHHHHHHTTTCCEEEEECCH-HHHCSST-TCCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHHH---
T ss_pred cchHHHH--HHHHHHHHhcCCceEEecccH-HhhCCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCccHHH---
Confidence 3455544 899999999999999999975 5556663 46778899999999999999999999999865211100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~ 359 (534)
.....|. +...+.+.++++.+++||++. |..|.++|||.. ++. +. ..+.....
T Consensus 136 ----~~~ggw~~r~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha 209 (454)
T 2o9p_A 136 ----EDEGGWTQRETIQHFKTYASVIMDRFGER--INWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMCHG 209 (454)
T ss_dssp ----HHTTGGGSTHHHHHHHHHHHHHHHHSSSS--CSEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ----HhcCCCCCcchHHHHHHHHHHHHHHhCCc--ceeEEEecCcceecccccccCcCCCCcccHHHHHHHHHHHHHHHH
Confidence 0001344 577899999999999999997 667899999973 111 11 12233357
Q ss_pred HHHHHHHhcCCceEE
Q 009475 360 AGYDAVRKYTSTAYV 374 (534)
Q Consensus 360 ~~~~aIR~~~p~~~I 374 (534)
++++++|+.+|+..|
T Consensus 210 ~Av~~~r~~~~~~~I 224 (454)
T 2o9p_A 210 IASNLHKEKGLTGKI 224 (454)
T ss_dssp HHHHHHHHTTCCSEE
T ss_pred HHHHHHHhhCCCCeE
Confidence 789999999887443
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.05 E-value=6.1e-09 Score=116.70 Aligned_cols=142 Identities=19% Similarity=0.160 Sum_probs=100.0
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.|++.||++|+|+||+. +. | + + +++++.|.++||+|+.+++..... ++.. +...
T Consensus 307 ~~dl~~~k~~G~N~vR~~----h~--p--~-~---------~~~~~~cD~~Gl~V~~e~~~~~~~--~~~~-----~~~~ 361 (667)
T 3cmg_A 307 EEDVALMREMGVNAIRLA----HY--P--Q-A---------TYMYDLMDKHGIVTWAEIPFVGPG--GYAD-----KGFV 361 (667)
T ss_dssp HHHHHHHHHTTCCEEEET----TS--C--C-C---------HHHHHHHHHHTCEEEEECCCBCCT--TSSS-----CSCC
T ss_pred HHHHHHHHHCCCCEEEec----CC--C--C-C---------HHHHHHHHHCCCEEEEcccccCcC--cccc-----cccc
Confidence 568889999999999993 11 1 1 1 678899999999999999743210 1100 0000
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhh
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 389 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~ 389 (534)
-.+...+.+.+.++.+.+|++++|+|++|.+.|||...+ +....+++++.+.||+.||+++|..+..+.. .+.
T Consensus 362 ~~~~~~~~~~~~~~~~v~r~rNHPSIi~W~~gNE~~~~~---~~~~~~~~~l~~~vk~~DptRpvt~~~~~~~----~~~ 434 (667)
T 3cmg_A 362 DQASFRENGKQQLIELIRQHYNHPSICFWGLFNELKEVG---DNPVEYVKELNALAKQEDPTRPTTSASNQDG----NLN 434 (667)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCSSS---SCCHHHHHHHHHHHHHHCTTSCEEEEECCCS----GGG
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCEEEEEecccCCCccc---hhHHHHHHHHHHHHHHHCCCCcEEEeCCCCC----ccc
Confidence 014556778889999999999999999999999997421 2235788999999999999999988643321 111
Q ss_pred cccCCCceEEEEEeecccC
Q 009475 390 SFASGLSRVVIDVHYYNLF 408 (534)
Q Consensus 390 ~~~~~~~nvv~d~H~Y~~f 408 (534)
. .--++++|+|..|
T Consensus 435 ~-----~~Dv~~~n~Y~~w 448 (667)
T 3cmg_A 435 F-----ITENIAWNRYDGW 448 (667)
T ss_dssp G-----SSSSEEEECCTTT
T ss_pred c-----ccCEEEecccccc
Confidence 1 1246889999653
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.7e-09 Score=114.97 Aligned_cols=181 Identities=18% Similarity=0.223 Sum_probs=109.8
Q ss_pred CcchhhhhhccCCCCCHHHHHHH-HhCCccEEEeCccccccc---CCCCCCC-CCCchHHHHHHHHHHHHHCCCEEEEEc
Q 009475 214 DKAPQVLQDHWDSYITDEDFKFL-SSNGINAVRIPVGWWIAN---DPTPPKP-FVGGSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 214 ~~a~~~~~~hw~~~ite~d~~~i-a~~G~N~VRIPv~~w~~~---~~~~~~~-~~~~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
..+...+...| ++.++.+ +++||..||++--+...+ ...++.+ | .+..+|++++.|.++||++++.|
T Consensus 33 ~~~~~~l~~d~-----~~~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y---~~~~~D~~~d~~~~~G~~p~~~l 104 (500)
T 4ekj_A 33 DYPGTLIREDS-----QAQLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVY---DWTKIDQLYDALLAKGIKPFIEL 104 (500)
T ss_dssp CCHHHHTSHHH-----HHHHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEE---CCHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCchhhcChHH-----HHHHHHHHHhcCceEEEECCccccccceeecCCCCeec---chHHHHHHHHHHHHCCCEEEEEE
Confidence 34555555555 4556655 579999999852211000 0001111 2 47899999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC----hhhHHHH----HHHHHHHHHHhcCC-CeEEEEEeccCCCCCC----CChHHHH
Q 009475 289 HAAPGSQNGNEHSATRDGFQEWG----DSNVADT----VAVIDFLAARYANR-PSLAAIELINEPLAPG----VALDTLK 355 (534)
Q Consensus 289 H~~pG~qng~~~sg~~~g~~~W~----~~~~~~~----~~~w~~lA~ryk~~-~~vlg~eL~NEP~~~~----~~~~~~~ 355 (534)
...|........ ....|. +...+.+ .++.+.+++||+.. ..+..||+.|||.... .+.+.+.
T Consensus 105 ~~~P~~~~~~~~-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~RYg~~~v~~w~~EvwNEp~~~~~~~~~~~~~y~ 179 (500)
T 4ekj_A 105 GFTPEAMKTSDQ-----TIFYWKGNTSHPKLGPWRDLIDAFVHHLRARYGVEEVRTWFFEVWNEPNLDGFWEKADQAAYF 179 (500)
T ss_dssp CCBCGGGCSSCC-----EETTTTEECSCCCHHHHHHHHHHHHHHHHHHHCHHHHHTSEEEESSCTTSTTTSGGGCHHHHH
T ss_pred eCCchhhcCCCC-----ccccccCCCCcccHHHHHHHHHHHHHHHHHhhCccccceeEEEEEECCCCccCCCCCCHHHHH
Confidence 887753221110 000111 2223333 35566667777643 3456799999998632 3567899
Q ss_pred HHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhccc--CCCceEEEEEeeccc
Q 009475 356 SYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFA--SGLSRVVIDVHYYNL 407 (534)
Q Consensus 356 ~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~~--~~~~nvv~d~H~Y~~ 407 (534)
++++.++++||+++|+..|...+.-+......++... .+..--++++|.|..
T Consensus 180 ~l~~~~~~aik~~~P~~~Vgg~~~~~~~~~~~fl~~~~~~~~~~D~is~H~Y~~ 233 (500)
T 4ekj_A 180 ELYDVTARAIKAIDPSLRVGGPATAGAAWVPEFLAHVKKSGSAVDFVTTHTYGV 233 (500)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEEGGGCSHHHHHHHHHHTTCCCSEEEEEEESE
T ss_pred HHHHHHHHHHHhhCCccccccCccCCccccHHHHHHHHhcCCccceEEeeccCC
Confidence 9999999999999999887653211111223333321 233345889999953
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.8e-08 Score=102.48 Aligned_cols=240 Identities=14% Similarity=0.193 Sum_probs=134.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCC-CCCCc---hHHHHHHHHHHHHHCCCEEEEEcCCC--CCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPK-PFVGG---SSKVLDNAFDWAEKYGVKVIVDLHAA--PGSQNGNEHSAT 303 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~-~~~~~---~l~~ld~~v~~a~~~Gl~VIlDlH~~--pG~qng~~~sg~ 303 (534)
++.++.|++.|+|+|||.+.++. .++..+. .+..+ ..+.+.++++.|+++||+|+|+.|-. +|...|.-....
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~-~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~i~~~~ 134 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLM-EHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEK 134 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEE-SSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSB
T ss_pred HHHHHHHHHcCCCEEEEEeeecC-CCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEeeccCCcccccccccC
Confidence 57899999999999999886542 2222211 12222 68999999999999999999999954 332211101111
Q ss_pred C--CCCCCCC--hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCC
Q 009475 304 R--DGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 379 (534)
Q Consensus 304 ~--~g~~~W~--~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~ 379 (534)
. ...+.|. -....+++.....+|++. .|..+.+-|||..... -..++.++++.||+++|. +|.....
T Consensus 135 ~~~~~~~~w~~~f~~y~~~i~~~a~~a~~~----~V~~~~IGNE~~~~~~----~~~~~~~Li~~vR~~~~g-~VTya~~ 205 (343)
T 3civ_A 135 EHGPDLESWEAWFGSYSDMMAHYAHVAKRT----GCEMFCVGCEMTTAEP----HEAMWRETIARVRTEYDG-LVTYNCN 205 (343)
T ss_dssp SCCTTSSBHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEESCTTTTT----CHHHHHHHHHHHHHHCCS-EEEEEEE
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHccCC----CceEEEECCCCCCCCc----hHHHHHHHHHHHHhhCCC-CEEEEec
Confidence 1 1112232 012222334444445544 3677899999986432 245667788999999997 5655421
Q ss_pred CCCCChhhhhcccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhh-ccCCCeEEEeecccchhhhhhh
Q 009475 380 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT-TSNGPLTFVGKSVTSALICKRC 458 (534)
Q Consensus 380 ~~~~~~~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~-~~~gp~~~vgEws~a~tdc~~~ 458 (534)
+...+...+. +.--+++++.|.|+.. .+...+.+. .+. +.++| +++.|+.....+...
T Consensus 206 ~~~~~~~~lw-----~~~DvIgin~Y~~~~~------w~~~~~~l~--------~~~~~~~KP-IiitE~G~~s~~g~~- 264 (343)
T 3civ_A 206 HGREEHVRFW-----DAVDLISSSAYYPIDR------WRDRVPVLR--------EVAEAHEKP-LFFMEVGCPSRSGSG- 264 (343)
T ss_dssp TTCTTTCSCG-----GGSSEEEEECCCCGGG------HHHHHHHHH--------HHHHHHTCC-EEEEEECCCSBTTGG-
T ss_pred Cccccccccc-----ccCCEEEEeccCCchh------HHHHHHHHH--------HHHHHhCCC-EEEEeeCCCCCCCCC-
Confidence 2111111111 2346889999988631 122222221 121 23344 555776443222110
Q ss_pred hhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCC--CcEEEEcccc
Q 009475 459 TQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRAT--FGWAYWAHKC 515 (534)
Q Consensus 459 ~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~--~GW~fWt~K~ 515 (534)
-..|.- ......+.+..++|+++.++++++.. .|-+.|.|..
T Consensus 265 --------------~~p~~~-~~~~~~se~~Qa~~l~~~~~~~~~~~~~~G~~vW~w~~ 308 (343)
T 3civ_A 265 --------------ACPWDY-RHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPW 308 (343)
T ss_dssp --------------GSTTCT-TCCCCBCHHHHHHHHHHHHHHSCCCTTEEEEEEEEECS
T ss_pred --------------CCCCcc-cCCCCCCHHHHHHHHHHHHHHHhcCCCccEEEEEEECC
Confidence 001100 00112345667899999999998754 3778898866
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=99.00 E-value=6e-10 Score=119.65 Aligned_cols=141 Identities=19% Similarity=0.261 Sum_probs=103.4
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.||++|+|++|+.|.| ....|.+..+..+..++.++++|+.|.++||.+||+||+..-.+.-
T Consensus 67 ~D~Yh~y--~eDi~lm~~lG~~~yRfsIsW-sRI~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H~d~P~~L--- 140 (479)
T 1gnx_A 67 TDHYHRW--REDVALMAELGLGAYRFSLAW-PRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQEL--- 140 (479)
T ss_dssp TCHHHHH--HHHHHHHHHTTCSEEEEECCH-HHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH---
T ss_pred cchhhcC--HHHHHHHHHcCCCEEEecccH-HHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccHHH---
Confidence 3456555 899999999999999999976 4455554345667799999999999999999999999875211100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~ 359 (534)
.....|. +...+.+.++++.+++||++. |..|..+|||.. ++. +. ..+.....
T Consensus 141 ----~~~GGw~~r~~v~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~lllAha 214 (479)
T 1gnx_A 141 ----ENAGGWPERATAERFAEYAAIAADALGDR--VKTWTTLNEPWCSAFLGYGSGVHAPGRTDPVAALRAAHHLNLGHG 214 (479)
T ss_dssp ----HHTTCTTSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ----HhcCCCCCHHHHHHHHHHHHHHHHHhCCc--ceeEEEecCcchhhhhhhccCcCCCCccChHHHHHHHHHHHHHHH
Confidence 0012354 678899999999999999995 667889999973 111 11 12334456
Q ss_pred HHHHHHHhcC-CceE
Q 009475 360 AGYDAVRKYT-STAY 373 (534)
Q Consensus 360 ~~~~aIR~~~-p~~~ 373 (534)
++++++|+.+ |+..
T Consensus 215 ~Av~~~r~~~~~~~~ 229 (479)
T 1gnx_A 215 LAVQALRDRLPADAQ 229 (479)
T ss_dssp HHHHHHHHHSCTTCE
T ss_pred HHHHHHHhhCCCCCe
Confidence 8899999988 7643
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=6.3e-10 Score=119.16 Aligned_cols=141 Identities=16% Similarity=0.228 Sum_probs=104.4
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.|+++|+|++|+.|.| ....|.....+.+..++.++++|+.+.++||.+||+||+..-.+.-
T Consensus 50 ~D~Yh~y--~eDi~lm~~~G~~~~R~sisW-sRi~P~G~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~L--- 123 (468)
T 1pbg_A 50 SDFYHKY--PVDLELAEEYGVNGIRISIAW-SRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL--- 123 (468)
T ss_dssp TCHHHHH--HHHHHHHHHTTCCEEEEECCH-HHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHHH---
T ss_pred ccccccC--HHHHHHHHHhCCCEEEeccCH-hhhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCccCHHH---
Confidence 4556555 899999999999999999976 4555654356778899999999999999999999999875321100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC--Ch-------HHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV--AL-------DTLKSYY 358 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~--~~-------~~~~~~~ 358 (534)
.....|. +...+.+.++.+.+++||++ |..|..+|||.. ++. +. ..+....
T Consensus 124 ----~~~ggw~~r~~~~~F~~ya~~~~~~~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~~a~h~~llAh 196 (468)
T 1pbg_A 124 ----HSNGDFLNRENIEHFIDYAAFCFEEFPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSH 196 (468)
T ss_dssp ----HHTTGGGSTHHHHHHHHHHHHHHHHCTT---CCEEEEESCHHHHHHHHHTSCCSTTCCCSCHHHHHHHHHHHHHHH
T ss_pred ----HhcCCCCChHHHHHHHHHHHHHHHHhCC---CCEEEEecCchhhhcccccccccCCcccccHHHHHHHHHHHHHHH
Confidence 0011354 57889999999999999998 777999999973 111 11 1223345
Q ss_pred HHHHHHHHhcCCceEE
Q 009475 359 KAGYDAVRKYTSTAYV 374 (534)
Q Consensus 359 ~~~~~aIR~~~p~~~I 374 (534)
.++++++|+.+|+..|
T Consensus 197 a~Av~~~r~~~~~~~I 212 (468)
T 1pbg_A 197 ARAVKLYKDKGYKGEI 212 (468)
T ss_dssp HHHHHHHHHTTCSSEE
T ss_pred HHHHHHHHhhCCCCeE
Confidence 6789999998887544
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.5e-09 Score=119.51 Aligned_cols=137 Identities=17% Similarity=0.203 Sum_probs=102.5
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++|++.||++|+|+||+.|. |...+|.++ .|+-..++.++++++.|+++||+||+.+..+- ++.+.+| +.+.
T Consensus 40 ~~dl~~mK~~G~N~Vrt~v~-W~~hEP~~G-~ydf~gl~~l~~fl~la~e~GL~VIl~~gpyi---~~ew~~g---G~P~ 111 (612)
T 3d3a_A 40 EHRIKMCKALGMNTICLYVF-WNFHEPEEG-RYDFAGQKDIAAFCRLAQENGMYVIVRPGPYV---CAEWEMG---GLPW 111 (612)
T ss_dssp HHHHHHHHHHTCCEEEEECC-HHHHCSSTT-CCCCSGGGCHHHHHHHHHHTTCEEEEECCSCC---CTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEcCh-HHhcCCCCC-ccChhHHHHHHHHHHHHHHCCCEEEEecCccc---ccccccC---CCch
Confidence 79999999999999999998 666777654 67777889999999999999999999864211 1111111 1222
Q ss_pred CC------------hhhHHHHHHHHHHHHHHhcC-----CCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcC-Cc
Q 009475 310 WG------------DSNVADTVAVIDFLAARYAN-----RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYT-ST 371 (534)
Q Consensus 310 W~------------~~~~~~~~~~w~~lA~ryk~-----~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~-p~ 371 (534)
|. +...+.+.++++.|++||++ +|.|++++|-||+...+.+ +.+.+.+.+.+|+.+ ++
T Consensus 112 Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~~~~~~n~p~II~wqIeNEyg~yg~~----~~y~~~l~~~l~~~g~~~ 187 (612)
T 3d3a_A 112 WLLKKKDIKLREQDPYYMERVKLFLNEVGKQLADLQISKGGNIIMVQVENEYGAFGID----KPYISEIRDMVKQAGFTG 187 (612)
T ss_dssp GGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGTCCC----HHHHHHHHHHHHHHTCCS
T ss_pred hhccCCCceecCCCHHHHHHHHHHHHHHHHHHhhhhhccCCCEEEEeecccccccCch----HHHHHHHHHHHHHcCCCc
Confidence 21 45677888999999999995 8999999999999632222 466777788888887 57
Q ss_pred eEEEEeC
Q 009475 372 AYVIMSN 378 (534)
Q Consensus 372 ~~Iiv~~ 378 (534)
.+++..+
T Consensus 188 vp~~~~~ 194 (612)
T 3d3a_A 188 VPLFQCD 194 (612)
T ss_dssp SCEEEEE
T ss_pred hhheecc
Confidence 7766654
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=98.90 E-value=3.2e-09 Score=115.11 Aligned_cols=113 Identities=15% Similarity=0.230 Sum_probs=84.5
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEE--EEcCCCCCCCCCCC--------
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI--VDLHAAPGSQNGNE-------- 299 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VI--lDlH~~pG~qng~~-------- 299 (534)
++|++.||++|+|+||++| +|...+|..+..|+ ++.+|++|+.|+++||+|| |++|..+|....+.
T Consensus 32 ~~dl~~mk~~Gln~Vr~~V-~W~~iEP~g~G~yd---f~~~d~~id~a~~~GL~viv~L~~h~c~g~~g~~~~~~lP~WL 107 (516)
T 1vem_A 32 ENDLRWAKQNGFYAITVDF-WWGDMEKNGDQQFD---FSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSWV 107 (516)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCCCBCCCGGG
T ss_pred HHHHHHHHHcCCCEEEEec-chhhccCCCCCccc---hHHHHHHHHHHHHCCCEEEEEecccccCCCcCCCCCCCCCHHH
Confidence 8999999999999999999 67777887334674 7888999999999999999 99986543211101
Q ss_pred -------------CCCCCC--CCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEE----------------EEeccCCCC
Q 009475 300 -------------HSATRD--GFQEWG-DSNVADTVAVIDFLAARYANRPSLAA----------------IELINEPLA 346 (534)
Q Consensus 300 -------------~sg~~~--g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg----------------~eL~NEP~~ 346 (534)
.+|.+. +...|. ....+.+.++++.|++||++++.|++ +++-||...
T Consensus 108 ~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r~~~~~~vI~eI~vglG~~GelryPs~qv~NE~g~ 186 (516)
T 1vem_A 108 WNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRYPSYTTSDGTGY 186 (516)
T ss_dssp GGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGBCCEEECCSGGGBSSCCCCCTTTTCCT
T ss_pred HhcCCccceeeECCCCCCCcccccccccCccHHHHHHHHHHHHHHHccCCCEEEEeeccccccccccccccccccCcCC
Confidence 111111 111133 34568889999999999999999998 889999754
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=3.8e-09 Score=112.24 Aligned_cols=139 Identities=16% Similarity=0.246 Sum_probs=102.6
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.|+++|+|++|+.|.|- ...|.+.+++.+..++.++++|+.+.++||.+||+||+..-.+.-
T Consensus 54 ~D~Yhry--~eDi~l~~~lG~~~~R~si~W~-Ri~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H~dlP~~L--- 127 (444)
T 4hz8_A 54 CDHYHRY--EQDLDLMRQLGLKTYRFSIAWA-RIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWV--- 127 (444)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCHH-HHSCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH---
T ss_pred cchhhhH--HHHHHHHHhcCCCEEEEeccHH-HcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCHHH---
Confidence 4566655 8999999999999999999864 455654346677899999999999999999999999875321100
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-C-h------HHHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-A-L------DTLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~-~------~~~~~~~~ 359 (534)
.....|. +...+.+.++.+.+++||++. |--|..+|||.. ++. + . ..+..-..
T Consensus 128 ----~~~GGW~nr~~v~~F~~Ya~~~~~~~gdr--Vk~W~T~NEp~~~~~~gy~~g~~~Pg~~~~~~~~~~~h~~llAha 201 (444)
T 4hz8_A 128 ----EDEGGWLSRESASRFAEYTHALVAALGDQ--IPLWVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRVAHHLLLSHG 201 (444)
T ss_dssp ----HHTTGGGSTHHHHHHHHHHHHHHHHHGGG--CSEEEEEECHHHHHHHHHTSCSSTTCCCCGGGHHHHHHHHHHHHH
T ss_pred ----hhCcCCCChHHHHHHHHHHHHHHHHhCcc--CCeEEEccCcchhhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 0012354 678899999999999999996 444679999973 111 1 1 12334456
Q ss_pred HHHHHHHhcCCc
Q 009475 360 AGYDAVRKYTST 371 (534)
Q Consensus 360 ~~~~aIR~~~p~ 371 (534)
++++++|+..|+
T Consensus 202 ~Av~~~r~~~~~ 213 (444)
T 4hz8_A 202 QALQAFRALSPA 213 (444)
T ss_dssp HHHHHHHHHCCT
T ss_pred HHHHHHHHhCCc
Confidence 788999999877
|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
Probab=98.83 E-value=2.5e-09 Score=115.57 Aligned_cols=114 Identities=16% Similarity=0.241 Sum_probs=89.1
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC--CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
-+||+.| ++|++.|+++|+|++|+.|.| ....|.+. ..+++..++.++++|+.+.++||.++|+||+..-.+.-.
T Consensus 74 ~D~Y~~~--~eDi~lm~~~G~~~~R~sisW-sRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~ 150 (512)
T 1v08_A 74 ANSYHMY--KTDVRLLKEMGMDAYRFSISW-PRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALE 150 (512)
T ss_dssp TCHHHHH--HHHHHHHHHTTCSEEEEECCH-HHHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH
T ss_pred cchHHHH--HHHHHHHHHhCCCeEecccCH-hhhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHH
Confidence 3566555 899999999999999999965 55666653 577888999999999999999999999997652111000
Q ss_pred CCCCCCCCCCCCC-h---hhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-D---SNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~---~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. + ...+.+.++.+.+++||+++ |..|.++|||.
T Consensus 151 ------~~yggw~~r~~c~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 193 (512)
T 1v08_A 151 ------EKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK--VKNWLTFNDPQ 193 (512)
T ss_dssp ------HHHCGGGCTTSSHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ------hhCCCCCCccccchHHHHHHHHHHHHHHhCCc--ceEEEEcccch
Confidence 0002344 4 67889999999999999997 77899999996
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=98.77 E-value=4.2e-09 Score=112.37 Aligned_cols=142 Identities=16% Similarity=0.182 Sum_probs=104.1
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.||++|+|++|+.|.| ....|.+.+++++..++..+++|+.+.++||.++|+|++..-.|.-
T Consensus 62 ~D~Yhry--~eDi~Lm~elG~~~yRfSIsW-sRI~P~g~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL~H~dlP~~L--- 135 (458)
T 3ta9_A 62 CDHYHLY--REDIELMKEIGIRSYRFSTSW-PRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQAL--- 135 (458)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH---
T ss_pred cchHHhH--HHHHHHHHHcCCCEEEecCcH-HHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHhH---
Confidence 4566655 899999999999999999986 4555655456778899999999999999999999999876321110
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-ChH-------HHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-ALD-------TLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~~-------~~~~~~~ 359 (534)
.....|. +...+.|.++.+.+++||++.- --|-.+|||.. ++. +.. .+..-..
T Consensus 136 ----~~~GGW~nr~~v~~F~~YA~~~f~~fgdrV--k~W~T~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~h~~llAha 209 (458)
T 3ta9_A 136 ----QDKGGWTNRDTAKYFAEYARLMFEEFNGLV--DLWVTHNEPWVVAFEGHAFGNHAPGTKDFKTALQVAHHLLLSHG 209 (458)
T ss_dssp ----HTTTGGGSHHHHHHHHHHHHHHHHHTTTTC--CEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ----HhcCCCCCHHHHHHHHHHHHHHHHHhcCcC--CEEEEecCcchhhcccccccccCCCcCCHHHHHHHHHHHHHHHH
Confidence 0112465 6788999999999999999973 34668999973 111 111 2223456
Q ss_pred HHHHHHHhcCCceEE
Q 009475 360 AGYDAVRKYTSTAYV 374 (534)
Q Consensus 360 ~~~~aIR~~~p~~~I 374 (534)
++++++|+..|+..|
T Consensus 210 ~Av~~~r~~~~~~~I 224 (458)
T 3ta9_A 210 MAVDIFREEDLPGEI 224 (458)
T ss_dssp HHHHHHHHHTCSSEE
T ss_pred HHHHHHHHhCCCCeE
Confidence 688899998876444
|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
Probab=98.75 E-value=8.9e-09 Score=110.22 Aligned_cols=114 Identities=18% Similarity=0.209 Sum_probs=89.6
Q ss_pred hhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 220 ~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
--+||+.| ++|++.|+++|+|++|+.|.| ....|.+ ...+++..++.++++|+.+.++||.++|+|++..-.+.-
T Consensus 52 a~D~Y~~~--~eDi~lm~~~G~~~~R~sisW-sRi~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~l- 127 (469)
T 2e9l_A 52 ACGSYTLW--EEDLKCIKQLGLTHYRFSLSW-SRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTL- 127 (469)
T ss_dssp TTCTTTCH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH-
T ss_pred cccHHHHH--HHHHHHHHHhCCCeEEccccH-hhcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCcch-
Confidence 34677776 899999999999999999975 5556655 346777899999999999999999999999654211100
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
.....|. +...+.+.++-+.+++||+++ |..|..+|||.
T Consensus 128 ------~~~ggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 167 (469)
T 2e9l_A 128 ------EDQGGWLSEAIIESFDKYAQFCFSTFGDR--VKQWITINEAN 167 (469)
T ss_dssp ------HHTTGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEESCHH
T ss_pred ------hhcCCCCCchHHHHHHHHHHHHHHHhcCc--CCEEEEccCcc
Confidence 0001344 577889999999999999997 67789999996
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.74 E-value=2.7e-07 Score=93.36 Aligned_cols=131 Identities=15% Similarity=0.205 Sum_probs=95.1
Q ss_pred HHHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATR 304 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qng~~~sg~~ 304 (534)
+.+++.+...+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|+... |.. ...+-.
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW-~~~ep~~g-~~---~~~~~D~~v~~a~~~gi~v~gh~lvW~~~----~P~W~~--- 93 (302)
T 1nq6_A 26 EAAYASTLDAQFGSVTPENEMKW-DAVESSRN-SF---SFSAADRIVSHAQSKGMKVRGHTLVWHSQ----LPGWVS--- 93 (302)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEEESTT----CCTTTT---
T ss_pred CHHHHHHHHhcCCeEEEcCceee-ccccCCCC-cC---CcHHHHHHHHHHHHCCCEEEEEecccCCC----CChhhh---
Confidence 46788888899999999 5665 45566554 44 36789999999999999997432 421 111110
Q ss_pred CCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC----ChHHH-----HHHHHHHHHHHHhcCCceEE
Q 009475 305 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRKYTSTAYV 374 (534)
Q Consensus 305 ~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~~~p~~~I 374 (534)
.|. +...+.+.+.++.+++||++ .|.+|++.|||..... ....| .+|.+.+++++|+.+|+..+
T Consensus 94 ----~~~~~~~~~~~~~~i~~v~~ry~g--~v~~WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~af~~Ar~~dP~a~L 167 (302)
T 1nq6_A 94 ----PLAATDLRSAMNNHITQVMTHYKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKL 167 (302)
T ss_dssp ----TSCHHHHHHHHHHHHHHHHHHTTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEE
T ss_pred ----cCCHHHHHHHHHHHHHHHHHHcCC--ceEEEEeecCccccCCCCccccCHHHHhcCHHHHHHHHHHHHHhCCCCEE
Confidence 123 45677888999999999998 5888999999986321 01112 35789999999999999888
Q ss_pred EEeC
Q 009475 375 IMSN 378 (534)
Q Consensus 375 iv~~ 378 (534)
++.+
T Consensus 168 ~~Nd 171 (302)
T 1nq6_A 168 CYND 171 (302)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 8764
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=9.2e-09 Score=118.35 Aligned_cols=141 Identities=20% Similarity=0.185 Sum_probs=105.6
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+++++.||++|+|+||++|. |...+|.++ .|+=.....|+++|+.|+++||+|||-.= | .-++.+..| |.|.
T Consensus 39 ~d~l~kmka~G~NtV~~yvf-W~~hEP~~G-~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G--P-yi~aE~~~G---G~P~ 110 (971)
T 1tg7_A 39 IDIFEKVKALGFNCVSFYVD-WALLEGNPG-HYSAEGIFDLQPFFDAAKEAGIYLLARPG--P-YINAEVSGG---GFPG 110 (971)
T ss_dssp HHHHHHHHTTTCCEEEEECC-HHHHCSBTT-BCCCCGGGCSHHHHHHHHHHTCEEEEECC--S-CCCTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEecc-HHHhCCCCC-eecccchHHHHHHHHHHHHcCCEEEEecC--C-cccceecCC---Ccce
Confidence 89999999999999999998 667777664 56544555699999999999999999532 1 112222222 2333
Q ss_pred CC-----------hhhHHHHHHHHHHHHHHhcCCC-----eEEEEEeccCCCCCCC-C-hHHHHHHHHHHHHHHHhcCCc
Q 009475 310 WG-----------DSNVADTVAVIDFLAARYANRP-----SLAAIELINEPLAPGV-A-LDTLKSYYKAGYDAVRKYTST 371 (534)
Q Consensus 310 W~-----------~~~~~~~~~~w~~lA~ryk~~~-----~vlg~eL~NEP~~~~~-~-~~~~~~~~~~~~~aIR~~~p~ 371 (534)
|. +.+.+...++.+.|++++++++ .|+++++-||...... + .+..++|++.+.+.+|+.+++
T Consensus 111 WL~~~p~~lR~~~p~y~~~~~~~~~~l~~~~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~ 190 (971)
T 1tg7_A 111 WLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIV 190 (971)
T ss_dssp GGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCC
T ss_pred eecccCCEecCCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCEEEEecccccCcccccccchhHHHHHHHHHHHHHHhCCC
Confidence 32 4677888899999999999775 8999999999854210 0 023688999999999999999
Q ss_pred eEEEEeC
Q 009475 372 AYVIMSN 378 (534)
Q Consensus 372 ~~Iiv~~ 378 (534)
.+++...
T Consensus 191 vPl~tn~ 197 (971)
T 1tg7_A 191 VPFISND 197 (971)
T ss_dssp SCBBCCB
T ss_pred eeEEEec
Confidence 9888764
|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.71 E-value=9e-09 Score=109.96 Aligned_cols=113 Identities=15% Similarity=0.185 Sum_probs=88.6
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC-CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP-KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~-~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
-+||+.| ++|++.|+++|+|++|+.|.| ....|.+. ..+++..++.++++|+.+.++||.+||+|++..-.+.-.
T Consensus 55 ~D~Y~~~--~eDi~lm~~~G~~~~R~sisW-sRi~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL~H~d~P~~L~- 130 (464)
T 1wcg_A 55 CDSYHKY--KEDVAIIKDLNLKFYRFSISW-ARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQ- 130 (464)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH-
T ss_pred cchHHhh--HHHHHHHHHhCCCeEEecccH-HHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCcchh-
Confidence 3556555 899999999999999999975 55666653 577788999999999999999999999997652111000
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
....|. +...+.+.++-+.+++||+++ |..|-.+|||.
T Consensus 131 ------~~ggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 169 (464)
T 1wcg_A 131 ------DLGGWVNPIMSDYFKEYARVLFTYFGDR--VKWWITFNEPI 169 (464)
T ss_dssp ------HTTGGGSTTHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ------hcCCCCChhHHHHHHHHHHHHHHHhCCc--CcEEEEccccc
Confidence 011344 577889999999999999997 67789999996
|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.2e-08 Score=109.40 Aligned_cols=114 Identities=18% Similarity=0.253 Sum_probs=87.8
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.|+++|+|++|+.|.| ....|.+.+.+++..++.++++|+.+.++||.++|+||+..-.+.-.
T Consensus 69 ~D~Yhry--keDi~lm~elG~~~yRfsIsW-sRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~-- 143 (481)
T 3f5l_A 69 TDQYHRY--KEDVNLMKSLNFDAYRFSISW-SRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALE-- 143 (481)
T ss_dssp TCHHHHH--HHHHHHHHHTTCCEEEEECCH-HHHCTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEESCSSCCBHHHH--
T ss_pred cchhhhH--HHHHHHHHHcCCCEEEecCcH-HHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCHHHH--
Confidence 3566656 899999999999999999986 45566553457778999999999999999999999999863211000
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.+.++.+.+++||++. |--|-.+|||.
T Consensus 144 ----~~yGGW~nr~~v~~F~~Ya~~~~~~fgd~--Vk~W~T~NEp~ 183 (481)
T 3f5l_A 144 ----KKYGGWLNAKMADLFTEYADFCFKTFGNR--VKHWFTFNQPR 183 (481)
T ss_dssp ----HHHCGGGSTTHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ----HHhCCCCCHHHHHHHHHHHHHHHHHhCCC--CCeEEEccCch
Confidence 0012354 677899999999999999986 44467899996
|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=8.9e-09 Score=111.97 Aligned_cols=114 Identities=16% Similarity=0.213 Sum_probs=89.1
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.|+++|+|++|+.|.| ....|.+...+++..++.++++|+.+.++||.+||+|++..-.+. -
T Consensus 124 ~D~Y~~y--~eDi~lm~~lG~~~~RfsIsW-sRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL~H~d~P~~---L 197 (565)
T 2dga_A 124 ANSYHLY--EEDVKALKDMGMKVYRFSISW-SRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQA---L 197 (565)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---H
T ss_pred cchHHHH--HHHHHHHHHhCCCeEEecccH-HHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCcHH---H
Confidence 4566655 899999999999999999965 556666535778889999999999999999999999976521110 0
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
.+....|. +...+.+.++-+.+++||+++ |..|..+|||.
T Consensus 198 ---~~~yggw~~r~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~ 238 (565)
T 2dga_A 198 ---EDKYGGFLNRQIVDDYKQFAEVCFKNFGDR--VKNWFTFNEPH 238 (565)
T ss_dssp ---HHHHCGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ---HHhcCCCCCchHHHHHHHHHHHHHHHhCCC--CceEEEeccch
Confidence 00012354 567889999999999999997 77799999997
|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.2e-08 Score=110.04 Aligned_cols=115 Identities=14% Similarity=0.158 Sum_probs=89.4
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC--CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
-+||+.| ++|++.|+++|+|++|+.|.| ....|.+. ..+++..++.++++|+.+.++||.+||+|++..-.+.-.
T Consensus 73 ~D~Y~~~--~eDi~lm~~lG~~~~R~sisW-sRi~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL~H~d~P~~L~ 149 (501)
T 1e4m_M 73 CDSFSYW--QKDIDVLDELNATGYRFSIAW-SRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQ 149 (501)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH
T ss_pred ccHHHHH--HHHHHHHHHhCCCeEEccccH-HhhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCHHHH
Confidence 3556555 899999999999999999975 55666652 567888999999999999999999999997652111000
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+....|. +...+.+.++-+.+++||+++ |..|-.+|||..
T Consensus 150 ------~~yggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~ 190 (501)
T 1e4m_M 150 ------DEYEGFLDPQIIDDFKDYADLCFEEFGDS--VKYWLTINQLYS 190 (501)
T ss_dssp ------HHHCGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEESCTTH
T ss_pred ------HhcCCCCCchHHHHHHHHHHHHHHHhCCC--CCEEEEecCchh
Confidence 0012354 577889999999999999997 667889999983
|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.1e-08 Score=110.11 Aligned_cols=114 Identities=18% Similarity=0.243 Sum_probs=88.5
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC--CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
-+||+.| ++|++.|+++|+|++|+.|.| ....|.+. ..+++..++.++++|+.+.++||.++|+|++..-.+.-.
T Consensus 69 ~D~Y~~~--~eDi~lm~~~G~~~~R~sisW-sRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~ 145 (490)
T 1cbg_A 69 IDEYHRY--KEDIGIMKDMNLDAYRFSISW-PRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQALE 145 (490)
T ss_dssp TCHHHHH--HHHHHHHHHTTCCEEEEECCH-HHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH
T ss_pred cChHHHH--HHHHHHHHHhCCCeEEecccH-HHhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCHhHH
Confidence 4566555 899999999999999999965 55666653 577888999999999999999999999997652111000
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.+.++-+.+++||+++ |..|..+|||.
T Consensus 146 ------~~yggw~~~~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 185 (490)
T 1cbg_A 146 ------DEYRGFLGRNIVDDFRDYAELCFKEFGDR--VKHWITLNEPW 185 (490)
T ss_dssp ------HHHCGGGSTTHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ------hhcCCcCCchHHHHHHHHHHHHHHHhCCc--ceEEEEccCch
Confidence 0001344 567889999999999999997 77789999997
|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=9.3e-09 Score=110.52 Aligned_cols=114 Identities=19% Similarity=0.297 Sum_probs=88.0
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.||++|+|++|+.|.| ....|.+.+++++..++.++++|+.|.++||.++|+||+..-.+.-.
T Consensus 66 ~D~YhrY--~eDi~lm~elG~~~yRfsI~W-sRI~P~g~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~-- 140 (488)
T 3gnp_A 66 VDQYHRF--EEDIQLMADMGMDAYRFSIAW-SRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALE-- 140 (488)
T ss_dssp TCHHHHH--HHHHHHHHHHTCCEEEEECCH-HHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH--
T ss_pred cchhhhH--HHHHHHHHHcCCCEEEecccH-HHeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCCCCCCHHHH--
Confidence 3556655 899999999999999999986 45556553567788999999999999999999999998853111000
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.+.++.+.+++||++. |--|-.+|||.
T Consensus 141 ----~~yGGW~n~~~v~~F~~Ya~~~~~~fgd~--Vk~W~T~NEp~ 180 (488)
T 3gnp_A 141 ----DKYKGWLDRQIVDDFAAYAETCFREFGDR--VKHWITLNEPH 180 (488)
T ss_dssp ----HHHCGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ----HHhCCCCCHHHHHHHHHHHHHHHHHhCCC--CCEEEEccCcc
Confidence 0012354 677899999999999999996 44467899996
|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=1.7e-08 Score=107.87 Aligned_cols=116 Identities=21% Similarity=0.322 Sum_probs=89.3
Q ss_pred hhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC--CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCC
Q 009475 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNG 297 (534)
Q Consensus 220 ~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng 297 (534)
--+||+.| ++|++.|+++|+|++|+.|.| ....|.+. ..+++..++.++++|+.+.++||.++|+|++..-.+.-
T Consensus 57 a~D~Y~~y--~eDi~lm~~~G~~~~R~sisW-sRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L 133 (465)
T 2e3z_A 57 ATDSYNRW--REDVQLLKSYGVKAYRFSLSW-SRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQAL 133 (465)
T ss_dssp TTCTTTTH--HHHHHHHHHTTCSEEEEECCH-HHHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHHH
T ss_pred ccchHHHh--HHHHHHHHHhCCCceecccch-HHhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCHHH
Confidence 34677766 899999999999999999965 56667653 57788899999999999999999999999664211100
Q ss_pred CCCCCCCCCCCCCC--hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 298 NEHSATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 298 ~~~sg~~~g~~~W~--~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
. +....|. +...+.+.++-+.+++||+++ |..|..+|||..
T Consensus 134 ~------~~yggw~~~~~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~ 176 (465)
T 2e3z_A 134 D------DRYGGWLNKEEAIQDFTNYAKLCFESFGDL--VQNWITFNEPWV 176 (465)
T ss_dssp H------HHHCGGGSHHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHH
T ss_pred H------hhcCCCCCCcchHHHHHHHHHHHHHHhCCC--ceEEEEccCchH
Confidence 0 0001232 456788999999999999997 677899999973
|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.4e-08 Score=110.62 Aligned_cols=114 Identities=16% Similarity=0.261 Sum_probs=89.0
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC--CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
-+||..| ++|++.|+++|+|++|+.|.| ....|.+. ..+++..++.+|++|+.+.++||.++|+|++..-.+.-.
T Consensus 126 ~D~Yh~y--~eDi~lm~~lG~~~~R~sisW-sRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~d~P~~L~ 202 (565)
T 1v02_A 126 ADSYHMY--AEDVRLLKEMGMDAYRFSISW-PRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALV 202 (565)
T ss_dssp TCHHHHH--HHHHHHHHHTTCSEEEEECCH-HHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH
T ss_pred ccHHHHH--HHHHHHHHHhCCCeEEcccCH-HHhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHH
Confidence 3556555 899999999999999999975 55666653 567888999999999999999999999997652111000
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.+.++-+.+++||+++ |..|..+|||.
T Consensus 203 ------~~yggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 242 (565)
T 1v02_A 203 ------DAYGGFLDERIIKDYTDFAKVCFEKFGKT--VKNWLTFNEPE 242 (565)
T ss_dssp ------HHHCGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ------hhcCCCCCchHHHHHHHHHHHHHHHhCCc--ceEEEEccCch
Confidence 0012354 567889999999999999997 77799999996
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.65 E-value=2.1e-08 Score=107.14 Aligned_cols=296 Identities=15% Similarity=0.179 Sum_probs=160.6
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCC--CCC---------------------------CchHHHHH
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK--PFV---------------------------GGSSKVLD 271 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~--~~~---------------------------~~~l~~ld 271 (534)
-+||+.| ++|++.|+++|+|++|+.|.| ....|.++. .++ +..++.++
T Consensus 56 ~d~Y~~y--~eDi~l~~~lG~~~~R~si~W-sRI~P~~g~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~an~~g~~~Y~ 132 (473)
T 3apg_A 56 PAYWHLY--KQDHDIAEKLGMDCIRGGIEW-ARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYR 132 (473)
T ss_dssp CCHHHHH--HHHHHHHHHTTCCEEEEECCH-HHHCCSCCTTSCCEEEECTTSCEEEEECCHHHHHHHHHHSCHHHHHHHH
T ss_pred ccchhHH--HHHHHHHHHcCCCEEEEecch-hhccccCCCCCCcccccccccccccccchhhHHHHHHhhhhHHHHHHHH
Confidence 3566655 899999999999999999975 556666531 566 66799999
Q ss_pred HHHHHHHHCCCEEEEEcCCCCCCCCCCCCCC------CCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCC
Q 009475 272 NAFDWAEKYGVKVIVDLHAAPGSQNGNEHSA------TRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEP 344 (534)
Q Consensus 272 ~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg------~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP 344 (534)
++|+.++++||.+||+|++..-.+--.+. + .......|. +...+.+.++-+.+++||++. |..|..+|||
T Consensus 133 ~~id~l~~~Gi~pivtL~H~~lP~wl~d~-~~~~~~~~~~~~~Gw~~~~~v~~F~~ya~~~~~~~gd~--V~~W~t~NEp 209 (473)
T 3apg_A 133 KIYSDWKERGKTFILNLYHWPLPLWIHDP-IAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDL--VDMWSTMNEP 209 (473)
T ss_dssp HHHHHHHTTTCEEEEESCCSCCCTTTBCH-HHHHHHCTTSSCBGGGSHHHHHHHHHHHHHHHHHHGGG--CSEEEEEECH
T ss_pred HHHHHHHHCCCEEEEEeCCCCCCHHHHhC-CCccccccCCccCCCCCccHHHHHHHHHHHHHHHhCCc--ceEEEEecCc
Confidence 99999999999999999765221110000 0 000112466 677889999999999999987 6679999999
Q ss_pred CCC----------CC-----Ch-------HHHHHHHHHHHHHHHhcCCceE-EEEeCCC-CCC---Chhhhhcc------
Q 009475 345 LAP----------GV-----AL-------DTLKSYYKAGYDAVRKYTSTAY-VIMSNRL-GPA---DHKELLSF------ 391 (534)
Q Consensus 345 ~~~----------~~-----~~-------~~~~~~~~~~~~aIR~~~p~~~-Iiv~~~~-~~~---~~~~~~~~------ 391 (534)
... +. +. ..+..-...+++++|+..+..+ |++...+ ... +.......
T Consensus 210 ~~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~lllAHa~A~~~~r~~~~~~IGi~~~~~~~~P~~~~~~~d~~aa~~~~~~ 289 (473)
T 3apg_A 210 NVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYE 289 (473)
T ss_dssp HHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTSCCSEEEEEEECCEEEESSGGGHHHHHHHHHHHHH
T ss_pred chhhcccccccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCeeecCCCCCHHHHHHHHHHhhh
Confidence 631 11 11 1122334678888999744322 2333221 011 11110000
Q ss_pred -c--C--CCceEEEEEeecccCCCCCCCCch-h-hhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhh-hhh
Q 009475 392 -A--S--GLSRVVIDVHYYNLFSNNFNGLNV-Q-QNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQ-IRI 463 (534)
Q Consensus 392 -~--~--~~~nvv~d~H~Y~~f~~~~~~~~~-~-~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~-~~~ 463 (534)
. . ..+--.+.+++|.+.......... . ....+.+.. ........|. .+|.=..+....... ..+
T Consensus 290 ~~dp~~d~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---t~~gW~i~P~GL~~~L~~~ 361 (473)
T 3apg_A 290 FVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSER-----GGFAKSGRPA---SDFGWEMYPEGLENLLKYL 361 (473)
T ss_dssp HHHHHHHTTCCSCEEEECCCEEEEEESSSSEEECTTSGGGSCT-----TSBCTTSCBB---CTTSCBCCHHHHHHHHHHH
T ss_pred cCceeEecCCCCeeEEcCccceEEecCCccccCCCCccccccc-----ccccCCCCCc---CCCCCcccHHHHHHHHHHH
Confidence 0 0 223466778888664211000000 0 000000000 0000000010 000000000000000 012
Q ss_pred hhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcC--CCcEEEEccccCCCCCChhHHHHCCCc
Q 009475 464 RKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRA--TFGWAYWAHKCEANHWSLKWMIENGYI 531 (534)
Q Consensus 464 ~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~--~~GW~fWt~K~~~~~Ws~~~~v~~g~i 531 (534)
.+++..|++|-|.+.....+....+.++.++++..++.+.. -.|.+.|++-. +-+|...-..+-|++
T Consensus 362 ~~rY~~Pi~ITENG~~~~~D~~Ri~yl~~hl~~~~~Ai~dGv~V~GY~~WSl~D-n~EW~~Gy~~RfGL~ 430 (473)
T 3apg_A 362 NNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTD-NYEWAQGFRMRFGLV 430 (473)
T ss_dssp HHHHCCCEEEEECCCCCTTCSSHHHHHHHHHHHHHHHHTTTCCEEEEEESCSBC-CCCGGGGGGSCCCSE
T ss_pred HHHhCCeEEEEecCCCCCCchHHHHHHHHHHHHHHHHHHcCCCEEEEEEecccc-cCcccccccCcCCeE
Confidence 33444467788876543222233455678888888888642 24999999866 556876666666665
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.65 E-value=2.6e-08 Score=106.61 Aligned_cols=146 Identities=16% Similarity=0.262 Sum_probs=103.1
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCC-----------------CCC------------CchHHHHH
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK-----------------PFV------------GGSSKVLD 271 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~-----------------~~~------------~~~l~~ld 271 (534)
-+||+.| ++|++.|+++|+|++|+.|.| ....|.++. .++ +..++.++
T Consensus 56 ~d~Y~~y--~eDi~lm~~~G~~~~R~sisW-sRi~P~~g~~~~~~v~~~~~~~~~~~~~n~~~~~~l~~~~n~~g~~~Y~ 132 (481)
T 1qvb_A 56 PGYWNLN--QNDHDLAEKLGVNTIRVGVEW-SRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYV 132 (481)
T ss_dssp CCHHHHH--HHHHHHHHHTTCCEEEEECCH-HHHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHH
T ss_pred cchHHHH--HHHHHHHHHcCCCccEeccch-hhhCCCCCCCccccccccccccccccccccccchhhhhhhcHHHHHHHH
Confidence 4566655 899999999999999999975 555665431 566 67899999
Q ss_pred HHHHHHHHCCCEEEEEcCCCCCCCCCCCC-----CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 272 NAFDWAEKYGVKVIVDLHAAPGSQNGNEH-----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 272 ~~v~~a~~~Gl~VIlDlH~~pG~qng~~~-----sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
++|+.++++||.+||+|++..-.+--.+. .|.+.....|. +...+.+.++-+.+++||++. |..|..+|||.
T Consensus 133 ~~id~l~~~Gi~p~vtL~H~~lP~~L~~~~~~~~~~~~~~~gGw~n~~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~ 210 (481)
T 1qvb_A 133 EMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGEL--PVMWSTMNEPN 210 (481)
T ss_dssp HHHHHHHTTTCEEEEESCCSCCBTTTBCHHHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTTS--CSEEEEEECHH
T ss_pred HHHHHHHHCCCEEEEEeCCCCCCHHHHhcCCcccccccccCCCcCCchHHHHHHHHHHHHHHHhCCC--ccEEEEecccc
Confidence 99999999999999999764321110000 01111122465 678889999999999999987 66799999996
Q ss_pred CC----------CC-----Ch-------HHHHHHHHHHHHHHHhcCCc
Q 009475 346 AP----------GV-----AL-------DTLKSYYKAGYDAVRKYTST 371 (534)
Q Consensus 346 ~~----------~~-----~~-------~~~~~~~~~~~~aIR~~~p~ 371 (534)
.. +. +. ..+..-..++++++|+..|+
T Consensus 211 ~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~~llAHa~A~~~~r~~~~~ 258 (481)
T 1qvb_A 211 VVYEQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKK 258 (481)
T ss_dssp HHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred hhhcccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 31 11 11 12223346788999998887
|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.6e-08 Score=109.63 Aligned_cols=114 Identities=19% Similarity=0.261 Sum_probs=88.7
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC--CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
-+||+.| ++|++.|+++|+|++|+.|.| ....|.+. ..+++..++.++++|+.+.++||.++|+|++..-.+.-.
T Consensus 93 ~D~Y~~y--~eDi~lm~~lG~~~~R~sisW-sRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~d~P~~L~ 169 (532)
T 2jf7_A 93 INCYHMY--KEDIKIMKQTGLESYRFSISW-SRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALE 169 (532)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH
T ss_pred hhHHHHH--HHHHHHHHHcCCCeEeccccH-HHhccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHH
Confidence 4556555 899999999999999999975 55566652 577888999999999999999999999997652111000
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.+.++-+.+++||+++ |..|..+|||.
T Consensus 170 ------~~yggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 209 (532)
T 2jf7_A 170 ------DEYGGFLSHRIVDDFCEYAEFCFWEFGDK--IKYWTTFNEPH 209 (532)
T ss_dssp ------HHHCGGGSTHHHHHHHHHHHHHHHHHGGG--CSEEEEEECHH
T ss_pred ------hhcCCCCCchHHHHHHHHHHHHHHHhCCc--CceEEEccCch
Confidence 0012354 567889999999999999987 66789999997
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=98.62 E-value=2.4e-08 Score=107.04 Aligned_cols=143 Identities=17% Similarity=0.223 Sum_probs=102.8
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCC-CCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPT-PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~-~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
-+||..| ++|++.|+++|+|++|+.|.| ....|. ..+++++..++.++++|+.+.++||.++|+||+..-.+.-.
T Consensus 51 ~D~Yhry--~eDi~lm~~lG~~~~Rfsi~W-~Ri~P~~G~g~~n~~G~~~Y~~lid~l~~~gI~p~vtL~H~dlP~~L~- 126 (479)
T 4b3l_A 51 SDAYHQI--ESDLTLLASLGHNSYRTSIQW-TRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFDLPIALY- 126 (479)
T ss_dssp TCHHHHH--HHHHHHHHTTTCCEEEEECCH-HHHBSCTTTTCBCHHHHHHHHHHHHHHHHHTCEEEEESCSSCCBHHHH-
T ss_pred cchHHHH--HHHHHHHHHcCCCEEEeecCH-HHhccCCCCCCcCHHHHHHHHHHHHHHHHCCCEeeEEecCCCcCHHHH-
Confidence 4566655 899999999999999999986 455565 33467788999999999999999999999999863211000
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHH
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYY 358 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~ 358 (534)
+....|. +...+.+.++.+.+++||++.- --|-.+|||.. ++. +. ..+..-.
T Consensus 127 -----~~yGGW~nr~~vd~F~~YA~~~f~~fgdrV--k~WiT~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~~~h~~llAh 199 (479)
T 4b3l_A 127 -----QAYGGWESKHVVDLFVAFSKVCFEQFGDRV--KDWFVHNEPMVVVEGSYLMQFHYPAIVDGKKAVQVAYNLALAT 199 (479)
T ss_dssp -----HHHCGGGCHHHHHHHHHHHHHHHHHHTTTC--CEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred -----HhcCCcCCHHHHHHHHHHHHHHHHHhCccC--CeEEEccCcchhhhccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 0012355 6778999999999999999963 34668999973 111 11 1223345
Q ss_pred HHHHHHHHhcC---CceEE
Q 009475 359 KAGYDAVRKYT---STAYV 374 (534)
Q Consensus 359 ~~~~~aIR~~~---p~~~I 374 (534)
.++++++|+.. |+..|
T Consensus 200 a~Av~~~r~~~~~~~~~~I 218 (479)
T 4b3l_A 200 AKVIQAYRRGPAELSDGRI 218 (479)
T ss_dssp HHHHHHHHHSCGGGSSSEE
T ss_pred HHHHHHHHHhcccCCCCEE
Confidence 67888899887 65433
|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
Probab=98.58 E-value=6.5e-08 Score=103.59 Aligned_cols=139 Identities=15% Similarity=0.127 Sum_probs=100.5
Q ss_pred hhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC--CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCC
Q 009475 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNG 297 (534)
Q Consensus 220 ~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng 297 (534)
--+||..| ++|++.|+++|+|++|+.|.| ....|.+. ..+++..++.++++|+.+.++||.+||+|++..-.+.-
T Consensus 57 a~D~Y~~y--~eDi~lm~~lG~~~~R~sisW-sRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L 133 (473)
T 3ahy_A 57 ACDSYNRT--AEDIALLKSLGAKSYRFSISW-SRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLPEGL 133 (473)
T ss_dssp TTCGGGCH--HHHHHHHHHHTCSEEEEECCH-HHHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH
T ss_pred ccchHHHH--HHHHHHHHHhCCCeEEccccH-HhhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCHHH
Confidence 34677766 899999999999999999975 55666653 57788899999999999999999999999765211000
Q ss_pred CCCCCCCCCCCCCC--hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-C-hH------HHH
Q 009475 298 NEHSATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-A-LD------TLK 355 (534)
Q Consensus 298 ~~~sg~~~g~~~W~--~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~-~~------~~~ 355 (534)
. +....|. +...+.+.++-+.++++| +. |..|..+|||.. ++. + .. .+.
T Consensus 134 ~------~~yggw~~~~~~~~~f~~ya~~~~~~~-dr--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~l 204 (473)
T 3ahy_A 134 H------QRYGGLLNRTEFPLDFENYARVMFRAL-PK--VRNWITFNEPLCSAIPGYGSGTFAPGRQSTSEPWTVGHNIL 204 (473)
T ss_dssp H------HHHCGGGCTTHHHHHHHHHHHHHHHHC-TT--CCEEEEEECHHHHHHHHHTTCCSTTCCCCSSHHHHHHHHHH
T ss_pred H------hhcCCCcCchhhHHHHHHHHHHHHHHh-Cc--CCEEEecCchhhhhccccccccCCCcccchHHHHHHHHHHH
Confidence 0 0001242 467889999999999999 65 677899999963 111 1 11 233
Q ss_pred HHHHHHHHHHHhcCC
Q 009475 356 SYYKAGYDAVRKYTS 370 (534)
Q Consensus 356 ~~~~~~~~aIR~~~p 370 (534)
.-...+++++|+..+
T Consensus 205 lAha~Av~~~r~~~~ 219 (473)
T 3ahy_A 205 VAHGRAVKAYRDDFK 219 (473)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcc
Confidence 345678888988643
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-07 Score=97.20 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=95.9
Q ss_pred HHHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEE---cCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD---LHAAPGSQNGNEHSATR 304 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlD---lH~~pG~qng~~~sg~~ 304 (534)
+++...|...+||.|++ .+.| ...+|.++ .| .+..+|+++++|+++||+|+.. .|.. ...+-..
T Consensus 52 ~~~~~~~~~~~fn~vt~en~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q----~P~W~~~-- 120 (347)
T 1xyz_A 52 DPTYNSILQREFSMVVCENEMKF-DALQPRQN-VF---DFSKGDQLLAFAERNGMQMRGHTLIWHNQ----NPSWLTN-- 120 (347)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSSS----CCHHHHT--
T ss_pred hHHHHHHHHhcCCEEEECCcccH-HHhcCCCC-cC---ChHHHHHHHHHHHHCCCEEEEEeeecccc----CcHHHhc--
Confidence 36788888899999999 6665 45566543 44 3688999999999999999743 2431 1111000
Q ss_pred CCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC---hHHH-----HHHHHHHHHHHHhcCCceEEE
Q 009475 305 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA---LDTL-----KSYYKAGYDAVRKYTSTAYVI 375 (534)
Q Consensus 305 ~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~---~~~~-----~~~~~~~~~aIR~~~p~~~Ii 375 (534)
..+. +...+.+.++++.+++||+++ |.+|+++|||...... ...| ..|.+.+++.+|+.+|+..++
T Consensus 121 ---~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a~L~ 195 (347)
T 1xyz_A 121 ---GNWNRDSLLAVMKNHITTVMTHYKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLF 195 (347)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEE
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhCCe--eEEEEeecccccCCCcccccChHHHhcCHHHHHHHHHHHHhhCCCCEEE
Confidence 0123 456778889999999999996 8889999999863211 1122 368899999999999999988
Q ss_pred EeC
Q 009475 376 MSN 378 (534)
Q Consensus 376 v~~ 378 (534)
+.+
T Consensus 196 ~Nd 198 (347)
T 1xyz_A 196 YND 198 (347)
T ss_dssp EEE
T ss_pred ecc
Confidence 864
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=2.6e-07 Score=101.38 Aligned_cols=138 Identities=15% Similarity=0.199 Sum_probs=96.4
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+++++.||++|+|+||++|.| ...+|.++ .|+=.....|+++++.|+++||+|||..--+ -++.+..| |.|.
T Consensus 43 ~d~l~kmKa~G~NtV~~yv~W-~~hEP~~G-~fdF~g~~DL~~fl~~a~~~GL~ViLr~GPy---i~aEw~~G---G~P~ 114 (654)
T 3thd_A 43 KDRLLKMKMAGLNAIQTYVPW-NFHEPWPG-QYQFSEDHDVEYFLRLAHELGLLVILRPGPY---ICAEWEMG---GLPA 114 (654)
T ss_dssp HHHHHHHHHTTCSEEEEECCH-HHHCSBTT-BCCCSGGGCHHHHHHHHHHTTCEEEEECCSC---CCTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEEech-hhcCCCCC-ccCccchHHHHHHHHHHHHcCCEEEeccCCc---cccccCCC---cCCh
Confidence 899999999999999998875 45566554 5654455569999999999999999963111 11111111 2233
Q ss_pred CC------------hhhHHHHHHHHHHHHHH-----hcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhc-CCc
Q 009475 310 WG------------DSNVADTVAVIDFLAAR-----YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKY-TST 371 (534)
Q Consensus 310 W~------------~~~~~~~~~~w~~lA~r-----yk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~-~p~ 371 (534)
|. +.+.+...++.+.|+++ |++.+.|+++++=||-....... ++|++.+.+..|+. +-+
T Consensus 115 WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~~~~~~~ggpVI~~QvENEyG~y~~~d---~~Ym~~l~~~~~~~~Gi~ 191 (654)
T 3thd_A 115 WLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACD---FDYLRFLQKRFRHHLGDD 191 (654)
T ss_dssp GGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGSSCCC---HHHHHHHHHHHHHHHCSS
T ss_pred HHhcCCCceEecCCHHHHHHHHHHHHHHHHHhhhhhccCCCCEEEEEeccccccccccc---HHHHHHHHHHHHHhcCCc
Confidence 32 46677888899999999 78889999999999986432211 46666667777775 555
Q ss_pred eEEEEeC
Q 009475 372 AYVIMSN 378 (534)
Q Consensus 372 ~~Iiv~~ 378 (534)
.+++-.+
T Consensus 192 v~l~t~D 198 (654)
T 3thd_A 192 VVLFTTD 198 (654)
T ss_dssp SEEEEEE
T ss_pred eeeEeec
Confidence 5555544
|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
Probab=98.53 E-value=6.3e-08 Score=103.89 Aligned_cols=116 Identities=17% Similarity=0.253 Sum_probs=87.9
Q ss_pred hhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC-CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP-KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 220 ~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~-~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
--+||..| ++|++.||++|+|+.|+.|.| ....|.+. .+..+..++..+++|+.|.++||.++|+|++..-.|.-.
T Consensus 69 A~D~Yhry--~eDi~Lm~elG~~~yRfSIsW-sRI~P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H~DlP~~L~ 145 (481)
T 3qom_A 69 AIDFYHRY--PEDIELFAEMGFKCFRTSIAW-TRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEMPYHLV 145 (481)
T ss_dssp TTCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH
T ss_pred cccHHHHH--HHHHHHHHHcCCCEEEecCcH-HHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEEccCCCCHHHH
Confidence 34566666 899999999999999999986 44455442 356778999999999999999999999998753111000
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+....|. +...+.|.++-+.+++||++. |--|-.+|||..
T Consensus 146 ------~~yGGW~nr~~v~~F~~YA~~~f~~fgdr--Vk~W~T~NEp~~ 186 (481)
T 3qom_A 146 ------KQYGGWRNRKLIQFYLNFAKVCFERYRDK--VTYWMTFNEINN 186 (481)
T ss_dssp ------HHHCGGGSTHHHHHHHHHHHHHHHHTTTT--CCEEEEETTGGG
T ss_pred ------hhcCCCCCHHHHHHHHHHHHHHHHHhCCc--CCEEEEccCccH
Confidence 0012354 677899999999999999986 334668999973
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=6.5e-08 Score=103.84 Aligned_cols=112 Identities=18% Similarity=0.221 Sum_probs=87.5
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
-+||..| ++|++.||++|+|+.|+.|.| ....|+. .+++++..++..+++|+.|.++||..+|+|++..-.|.-
T Consensus 62 ~D~Yhry--~EDi~Lm~elG~~~yRfSIsW-sRI~P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL~H~DlP~~L-- 136 (487)
T 3vii_A 62 DDSYHLY--KEDVKILKELGAQVYRFSISW-ARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQAL-- 136 (487)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH--
T ss_pred cChHHHH--HHHHHHHHHcCCCEEEeeCCH-HHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEecCCCcHHH--
Confidence 3566666 899999999999999999987 4444543 346778899999999999999999999999986322110
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCC
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEP 344 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP 344 (534)
.....|. +...+.|.++-+.+.++|++.-. -|-.+|||
T Consensus 137 -----~~~GGW~nr~~v~~F~~YA~~~f~~fgdrVk--~W~T~NEp 175 (487)
T 3vii_A 137 -----QDLGGWPNLVLAKYSENYARVLFKNFGDRVK--LWLTFNEP 175 (487)
T ss_dssp -----HTTTSTTSTHHHHHHHHHHHHHHHHHTTTCC--EEEEEECH
T ss_pred -----HHcCCCCCHHHHHHHHHHHHHHHHHhcCCCC--eEEEecCc
Confidence 0123465 78889999999999999999643 35588999
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=3.1e-07 Score=105.44 Aligned_cols=144 Identities=19% Similarity=0.219 Sum_probs=95.5
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.||+.||++|+|+||+ |... .|.+ +++++.|.++||+|+.|++...+. .+
T Consensus 355 ~~~l~~~k~~g~N~iR~----wgg~------~y~~------~~~~d~cD~~GilV~~e~~~~~~~------------~~- 405 (848)
T 2je8_A 355 QTLFRDMKEANMNMVRI----WGGG------TYEN------NLFYDLADENGILVWQDFMFACTP------------YP- 405 (848)
T ss_dssp HHHHHHHHHTTCCEEEE----CTTS------CCCC------HHHHHHHHHHTCEEEEECSCBSSC------------CC-
T ss_pred HHHHHHHHHcCCcEEEe----CCCc------cCCC------HHHHHHHHHcCCEEEECcccccCC------------CC-
Confidence 55788999999999999 3100 1111 578999999999999998632100 00
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC----C----CCh---HH-HH----HHHHHHHHHHHhcCCceE
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----G----VAL---DT-LK----SYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~----~----~~~---~~-~~----~~~~~~~~aIR~~~p~~~ 373 (534)
..+...+.+.+.++.+.+|++++|+|++|.+.|||... + .+. +. +. .|.+.+.+.||+.||+++
T Consensus 406 ~~~~~~~~~~~~~~~~v~r~~nHPSii~W~~~NE~~~~~~~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk~~Dptr~ 485 (848)
T 2je8_A 406 SDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRF 485 (848)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEEccCCCcccccccccccccCccchhhhHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 01456677888999999999999999999999999431 0 011 11 22 145678999999999999
Q ss_pred EEEeCCCCCCChhhhhcccCCCceEEEEEeecccCC
Q 009475 374 VIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFS 409 (534)
Q Consensus 374 Iiv~~~~~~~~~~~~~~~~~~~~nvv~d~H~Y~~f~ 409 (534)
+..+..+.+ .... +...++-+.|+|..|.
T Consensus 486 v~~~S~~~g-~~~~------~~~~~~gd~hy~~~w~ 514 (848)
T 2je8_A 486 YVHSSPYLA-NWGR------PESWGTGDSHNWGVWY 514 (848)
T ss_dssp EESSBSSSC-CTTC------GGGTTBSCEECCTTTT
T ss_pred EEecCCCCC-CCCC------CCCCCCCCccccCccc
Confidence 887643321 1110 1112234688887653
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.6e-07 Score=106.88 Aligned_cols=143 Identities=20% Similarity=0.216 Sum_probs=100.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+++++.||++|+|+|+++|. |...+|.++ .|+=.....|+++|+.|+++||+|||-.--+ -++.+..| |.|.
T Consensus 59 ~d~l~kmKa~GlNtV~tYV~-Wn~hEP~eG-~fdFsg~~dL~~fl~la~e~GL~VILRpGPY---i~aEw~~G---G~P~ 130 (1003)
T 3og2_A 59 LDVFHKIKALGFNTVSFYVD-WALLEGKPG-RFRADGIFSLEPFFEAATKAGIYLLARPGPY---INAEVSGG---GFPG 130 (1003)
T ss_dssp HHHHHHHHTTTCCEEEEECC-HHHHCSBTT-BCCCCGGGCSHHHHHHHHHHTCEEEEEEESC---CCTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEecc-hhhcCCCCC-EecccchhhHHHHHHHHHHcCCEEEecCCcc---eeeecCCC---Cccc
Confidence 79999999999999999998 566677654 5553444569999999999999999952111 11111111 1233
Q ss_pred CC-----------hhhHHHHHHHHHHHHHHhcCC-----CeEEEEEeccCCCCCCCC-hHHHHHHHHHHHHHHHhcCCce
Q 009475 310 WG-----------DSNVADTVAVIDFLAARYANR-----PSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 310 W~-----------~~~~~~~~~~w~~lA~ryk~~-----~~vlg~eL~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
|. +.+.+...++.+.|+++++.+ +.|+++++=||....... ...=++|++.+.+..|+.+-..
T Consensus 131 WL~~~~~~lRt~~p~yl~~~~~~~~~l~~~~~~~~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~V 210 (1003)
T 3og2_A 131 WLQRVKGKLRTDAPDYLHATDNYVAHIASIIAKAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIV 210 (1003)
T ss_dssp GGGGCCSCTTSCCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCS
T ss_pred hhccCCCeecCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEcccccCcccccccCCCHHHHHHHHHHHHHcCCce
Confidence 32 567778888899999998755 579999999998752210 0002578888888889888888
Q ss_pred EEEEeCCC
Q 009475 373 YVIMSNRL 380 (534)
Q Consensus 373 ~Iiv~~~~ 380 (534)
+++..+.+
T Consensus 211 Pl~t~d~~ 218 (1003)
T 3og2_A 211 PLINNDAF 218 (1003)
T ss_dssp CBBCCBSS
T ss_pred EEEEcCCc
Confidence 87776644
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=2.2e-07 Score=94.72 Aligned_cols=127 Identities=20% Similarity=0.399 Sum_probs=95.3
Q ss_pred HHHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEE-c--CCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD-L--HAAPGSQNGNEHSATR 304 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlD-l--H~~pG~qng~~~sg~~ 304 (534)
+.+++.+.+.+||.||+ .+.| ...+|.++ .| .+..+|+++++|+++||+|+.. + |..
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW-~~~ep~~g-~~---~~~~~D~~~~~a~~~gi~v~ghtl~W~~~------------- 87 (315)
T 3cui_A 26 EAQYKAIADSEFNLVVAENAMKW-DATEPSQN-SF---SFGAGDRVASYAADTGKELYGHTLVWHSQ------------- 87 (315)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEEESSS-------------
T ss_pred CHHHHHHHHhcCCEEEECCcccH-HHhCCCCC-cC---ChHHHHHHHHHHHHCCCEEEEEeeecCCC-------------
Confidence 46888888899999999 5655 45566543 44 3688999999999999998653 2 321
Q ss_pred CCCCCC----C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-CC--hHHH-----HHHHHHHHHHHHhcCCc
Q 009475 305 DGFQEW----G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-VA--LDTL-----KSYYKAGYDAVRKYTST 371 (534)
Q Consensus 305 ~g~~~W----~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~-~~--~~~~-----~~~~~~~~~aIR~~~p~ 371 (534)
.|.| . +...+...++++.+++||++. |.+||+.|||.... .. ...| ..|.+.+++++|+.+|+
T Consensus 88 --~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af~~Ar~~dP~ 163 (315)
T 3cui_A 88 --LPDWAKNLNGSAFESAMVNHVTKVADHFEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPT 163 (315)
T ss_dssp --CCHHHHTCCHHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSS
T ss_pred --CCHHHhcCCHHHHHHHHHHHHHHHHHHcCCc--eEEEEeecccccCCCCccccchHHHhccHHHHHHHHHHHHhhCCC
Confidence 1233 2 456678889999999999985 88899999998633 10 1122 46889999999999999
Q ss_pred eEEEEeC
Q 009475 372 AYVIMSN 378 (534)
Q Consensus 372 ~~Iiv~~ 378 (534)
..|++.+
T Consensus 164 a~l~~nd 170 (315)
T 3cui_A 164 AKLCIND 170 (315)
T ss_dssp SEEEEEE
T ss_pred CEEEECC
Confidence 9988864
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=98.48 E-value=7.6e-07 Score=103.77 Aligned_cols=115 Identities=23% Similarity=0.201 Sum_probs=85.3
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc----CCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGSQNGNEHSATRD 305 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl----H~~pG~qng~~~sg~~~ 305 (534)
++||+.||++|+|+||+. +. | + -+++++.|.++||+||.++ |... .+.+. ....
T Consensus 352 ~~dl~lmK~~G~N~VR~~----hy--p--~----------~~~fydlcDe~Gi~V~~E~~~~~~g~~---~~~w~-~~~~ 409 (1024)
T 1yq2_A 352 REDLALMKRFNVNAIRTS----HY--P--P----------HPRLLDLADEMGFWVILECDLETHGFE---AGGWV-ENPS 409 (1024)
T ss_dssp HHHHHHHHHTTCCEEEET----TS--C--C----------CHHHHHHHHHHTCEEEEECSCBCGGGT---TTTTT-TCGG
T ss_pred HHHHHHHHHcCCCEEEec----CC--C--C----------CHHHHHHHHHCCCEEEEcCCcccCCcc---ccccc-ccCC
Confidence 578999999999999993 11 1 1 1678899999999999987 2210 00000 0000
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 306 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 306 g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
. .+...+.+.+.++.+.+|++++|+|++|.+.||+... ..++++++.||+.||+++|....
T Consensus 410 ~----~p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpv~~~~ 470 (1024)
T 1yq2_A 410 D----VPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTG--------SNLAAMAAWAHARDSSRPVHYEG 470 (1024)
T ss_dssp G----CGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECTT
T ss_pred C----CHHHHHHHHHHHHHHHHHcCCCCeEEEEECCcCcchH--------HHHHHHHHHHHHhCCCceEEeCC
Confidence 0 1355677888999999999999999999999999741 34678899999999999998754
|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=8.9e-08 Score=103.24 Aligned_cols=114 Identities=18% Similarity=0.279 Sum_probs=87.5
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC--CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
-+||..| ++|++.||++|+|+.|+.|.| ....|.+. .+.++..++..+++|+.|.++||..+|+|||..-.|.-.
T Consensus 84 ~D~Yhry--kEDi~Lm~elG~~~yRfSIsW-sRI~P~g~~~g~vN~~Gl~fY~~lid~l~~~GIeP~VTL~HwDlP~~L~ 160 (505)
T 3ptm_A 84 SDSYHLY--KEDVRLMKDMGMDAYRFSISW-TRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALE 160 (505)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH
T ss_pred ccHHHHH--HHHHHHHHHcCCCEEEeeccH-HHcCcCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCCcHHHH
Confidence 4566666 899999999999999999986 44556542 467788999999999999999999999998863211000
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.|.++-+.+++||++.- --|-.+|||.
T Consensus 161 ------~~yGGW~nr~~v~~F~~YA~~~f~~fgDrV--k~W~T~NEp~ 200 (505)
T 3ptm_A 161 ------DKYNGFLSPNIINDFKDYAEICFKEFGDRV--KNWITFNEPW 200 (505)
T ss_dssp ------HHHCGGGSTHHHHHHHHHHHHHHHHHTTTC--CEEEEEECHH
T ss_pred ------HhcCCcCCHHHHHHHHHHHHHHHHHhCccC--ceEEEecCcc
Confidence 0012354 6778999999999999999963 3456899996
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=98.47 E-value=1.1e-06 Score=102.45 Aligned_cols=115 Identities=18% Similarity=0.172 Sum_probs=84.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCC-CCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQ 308 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~-pG~qng~~~sg~~~g~~ 308 (534)
+.|++.||++|+|+||+. + . | + . +++++.|.++||+|+.++... .|. .+... ....
T Consensus 373 ~~dl~lmK~~g~N~vR~~----h-y-p--~---~-------~~~~dlcDe~Gi~V~~E~~~~~~g~-~~~~~---~~~~- 429 (1023)
T 1jz7_A 373 VQDILLMKQNNFNAVRCS----H-Y-P--N---H-------PLWYTLCDRYGLYVVDEANIETHGM-VPMNR---LTDD- 429 (1023)
T ss_dssp HHHHHHHHHTTCCEEECT----T-S-C--C---C-------HHHHHHHHHHTCEEEEECSCBCTTS-SSTTT---TTTC-
T ss_pred HHHHHHHHHcCCCEEEec----C-C-C--C---C-------HHHHHHHHHCCCEEEECCCcccCCc-cccCc---CCCC-
Confidence 568899999999999983 1 1 1 1 1 468899999999999997211 111 00000 0011
Q ss_pred CCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 309 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 309 ~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
+...+.+.+.++.+.+|+++||+|++|.+.||+... ...+++++.||+.||+++|..+.
T Consensus 430 ---p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~~--------~~~~~l~~~ik~~DptRpv~~~~ 488 (1023)
T 1jz7_A 430 ---PRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEG 488 (1023)
T ss_dssp ---GGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred ---HHHHHHHHHHHHHHHHHhCCCCEEEEEECccCCcch--------HHHHHHHHHHHHhCCCCeEEecC
Confidence 355677888999999999999999999999999741 24668899999999999988764
|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=8.6e-08 Score=103.41 Aligned_cols=114 Identities=21% Similarity=0.258 Sum_probs=87.5
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC--CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
-+||..| ++|++.||++|+|+.|+.|.| ....|.+ .+++++..++.++++|+.+.++||.++|+||+..-.+.-.
T Consensus 72 ~D~YhrY--kEDi~Lm~elG~~~yRfSIsW-sRI~P~g~~~g~~N~~Gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L~ 148 (513)
T 4atd_A 72 VDSYHLY--KEDVNILKNLGLDAYRFSISW-SRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALE 148 (513)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH
T ss_pred cchHHHH--HHHHHHHHHcCCCEEEEeCcH-HHcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCcHHHH
Confidence 4566666 899999999999999999986 4455654 2467788999999999999999999999998863211000
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.|.++-+.+++||++.- --|-.+|||.
T Consensus 149 ------~~yGGW~nr~~v~~F~~YA~~~f~~fgdrV--k~WiT~NEp~ 188 (513)
T 4atd_A 149 ------DEYGGFLSPRIVDDFCEYAELCFWEFGDRV--KHWMTLNEPW 188 (513)
T ss_dssp ------HHHCGGGSTTHHHHHHHHHHHHHHHHTTTC--CEEEEEECHH
T ss_pred ------HHcCCcCCHHHHHHHHHHHHHHHHHhcCcC--ceEEEccCcc
Confidence 0012354 6778999999999999999963 3456899996
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=98.45 E-value=4.8e-07 Score=98.50 Aligned_cols=136 Identities=21% Similarity=0.249 Sum_probs=94.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCC-CCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ-NGNEHSATRDGFQ 308 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~q-ng~~~sg~~~g~~ 308 (534)
+++++.||++|+|+||++|. |...+|.++ .|+=.....|+++++.|+++||+|||- ||.. ++.+..| |.|
T Consensus 35 ~d~l~kmKa~G~NtV~~yv~-W~~hEP~~G-~fdF~g~~dL~~fl~~a~~~Gl~Vilr----pGPYi~aEw~~G---G~P 105 (595)
T 4e8d_A 35 YHSLYNLKALGFNTVETYVA-WNLHEPCEG-EFHFEGDLDLEKFLQIAQDLGLYAIVR----PSPFICAEWEFG---GLP 105 (595)
T ss_dssp HHHHHHHHHTTCCEEEEECC-HHHHCSBTT-BCCCSGGGCHHHHHHHHHHTTCEEEEE----CCSCCCTTBGGG---GCC
T ss_pred HHHHHHHHHcCCCEEEEecc-HHHcCCCCC-eecccchhhHHHHHHHHHHcCCEEEEe----cCCceecccCCC---cCC
Confidence 79999999999999999998 566677654 565445556999999999999999996 2211 1111111 233
Q ss_pred CCC-----------hhhHHHHHHHHHHHHHHhc-----CCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCce
Q 009475 309 EWG-----------DSNVADTVAVIDFLAARYA-----NRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 309 ~W~-----------~~~~~~~~~~w~~lA~ryk-----~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
.|. +...+...++++.|+++.+ +...|+++++=||......+ ++|.+.+.+..|+.+-+.
T Consensus 106 ~WL~~~p~~lRt~~p~y~~~~~~~~~~l~~~l~~~~~~~GgpVI~~QvENEyG~~~~~----~~Y~~~l~~~~~~~Gi~v 181 (595)
T 4e8d_A 106 AWLLTKNMRIRSSDPAYIEAVGRYYDQLLPRLVPRLLDNGGNILMMQVENEYGSYGED----KAYLRAIRQLMEECGVTC 181 (595)
T ss_dssp GGGGGSSSCSSSSCHHHHHHHHHHHHHHGGGTGGGBGGGTSCEEEEESSSSGGGTCCC----HHHHHHHHHHHHHTTCCS
T ss_pred hhhccCCceeccCCHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEEEccccccccCCc----HHHHHHHHHHHHHcCCcE
Confidence 342 3455666666666666544 33568899999998653322 466666777777778888
Q ss_pred EEEEeC
Q 009475 373 YVIMSN 378 (534)
Q Consensus 373 ~Iiv~~ 378 (534)
+++..+
T Consensus 182 pl~t~d 187 (595)
T 4e8d_A 182 PLFTSD 187 (595)
T ss_dssp CEEEEE
T ss_pred EEEEcc
Confidence 888765
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.2e-07 Score=102.17 Aligned_cols=112 Identities=19% Similarity=0.291 Sum_probs=76.0
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCC---------CCCCC--CCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA---------APGSQ--NGN 298 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~---------~pG~q--ng~ 298 (534)
+++++.||++|+|+||+++ .|...+|.++ .|+ ++.||++|+.|+++||+|||-+.+ .|..- ...
T Consensus 76 ~~~W~~mKa~G~NtVr~~V-~W~~hEP~~G-~yD---F~~LD~~ldla~e~GL~VIL~i~aeW~~ggta~~P~WL~~d~~ 150 (552)
T 3u7v_A 76 AKVWPAIEKVGANTVQVPI-AWEQIEPVEG-QFD---FSYLDLLLEQARERKVRLVLLWFGTWKNSSPSYAPEWVKLDDK 150 (552)
T ss_dssp HHHHHHHHHHTCSEEEEEE-EHHHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEEEEETTBCTTSCHHHHTCTT
T ss_pred HHHHHHHHHhCCCEEEEEe-hhhccCCCCC-ccC---hhhHHHHHHHHHHCCCEEEEEeccccccCCCcCCCchhhcCcc
Confidence 5667799999999999999 4566677554 553 566999999999999999997321 12110 000
Q ss_pred ------CCCCCCCC-CCCCCh----hhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 299 ------EHSATRDG-FQEWGD----SNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 299 ------~~sg~~~g-~~~W~~----~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
...|.+.. .....+ ...+.+.++.+.|++||+++|.|+++++-||+..
T Consensus 151 ~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r~~~~p~VI~wQIeNEyG~ 209 (552)
T 3u7v_A 151 RFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLKAKDAAQKTVIMVQVENETGT 209 (552)
T ss_dssp TSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEESCSB
T ss_pred cCceeECCCCcEeecCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecccCCC
Confidence 00011000 000112 2355677888999999999999999999999974
|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
Probab=98.41 E-value=4.1e-06 Score=97.55 Aligned_cols=123 Identities=23% Similarity=0.211 Sum_probs=84.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc----CCCCCCC-----CCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGSQ-----NGNEH 300 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl----H~~pG~q-----ng~~~ 300 (534)
+.|++.||++|+|+||.. + . | +. ++..+.|.++||+|+-+. |+..... +..+.
T Consensus 378 ~~Di~lmK~~g~NaVRts----H-y-p--~~----------~~fydlCDe~Gi~V~dE~~~e~hG~~~~~~~p~~~~~~~ 439 (1032)
T 3oba_A 378 VRDLILMKKFNINAVRNS----H-Y-P--NH----------PKVYDLFDKLGFWVIDEADLETHGVQEPFNRHTNLEAEY 439 (1032)
T ss_dssp HHHHHHHHHTTCCEEECT----T-S-C--CC----------TTHHHHHHHHTCEEEEECSCBCGGGGHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCcEEEec----C-C-C--Ch----------HHHHHHHHHCCCEEEEccccccCCccccccccccccccc
Confidence 678999999999999983 1 1 1 11 356789999999999886 4320000 00001
Q ss_pred CCCC-------CCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceE
Q 009475 301 SATR-------DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 301 sg~~-------~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ 373 (534)
++.+ .....-.+.-.+.+++-.+.|.+|+++||+|+.|.+.||+... ...+++++.+|+.||+++
T Consensus 440 ~~~~~~~~~~~~~~~~~~p~w~~~~~~~~~~mV~RdrNHPSIi~WslgNE~~~g--------~~~~~~~~~~k~~DptRp 511 (1032)
T 3oba_A 440 PDTKNKLYDVNAHYLSDNPEYEVAYLDRASQLVLRDVNHPSIIIWSLGNEACYG--------RNHKAMYKLIKQLDPTRL 511 (1032)
T ss_dssp TTTTHHHHTTTGGGTTTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCBSCCCC--------HHHHHHHHHHHHHCTTSE
T ss_pred cccccccccccccccCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEECccCCccc--------hhHHHHHHHHHHhCCCCc
Confidence 1100 0000001455677888999999999999999999999998642 235788999999999999
Q ss_pred EEEeC
Q 009475 374 VIMSN 378 (534)
Q Consensus 374 Iiv~~ 378 (534)
|..++
T Consensus 512 v~~e~ 516 (1032)
T 3oba_A 512 VHYEG 516 (1032)
T ss_dssp EECTT
T ss_pred EEecc
Confidence 98764
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=98.40 E-value=5.5e-07 Score=91.63 Aligned_cols=130 Identities=19% Similarity=0.340 Sum_probs=94.0
Q ss_pred HHHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~ 307 (534)
+.+++.|...+||.|++ .+.| ...+|.++ .| .+..+|+++++|+++||+|.. |..- +|+ ..
T Consensus 27 ~~~~~~~~~~~fn~vt~eN~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~g--htlv------W~~----q~ 89 (313)
T 1v0l_A 27 DSTYTSIAGREFNMVTAENEMKI-DATEPQRG-QF---NFSSADRVYNWAVQNGKQVRG--HTLA------WHS----QQ 89 (313)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--EEEE------CSS----SC
T ss_pred CHHHHHHHHhcCCEEEECCcccH-HHhCCCCC-cc---CchHHHHHHHHHHHCCCEEEE--Eeec------CcC----cC
Confidence 36788888899999999 4554 45566543 34 468899999999999999853 3220 011 12
Q ss_pred CCCC-----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC----hHHH----HHHHHHHHHHHHhcCCceEE
Q 009475 308 QEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----LDTL----KSYYKAGYDAVRKYTSTAYV 374 (534)
Q Consensus 308 ~~W~-----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~----~~~~----~~~~~~~~~aIR~~~p~~~I 374 (534)
|.|- +...+...+.++.+++||++. |..+++.|||...+.+ ...+ ..|.+.+++++|+.+|+..+
T Consensus 90 P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~--i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~a~L 167 (313)
T 1v0l_A 90 PGWMQSLSGSALRQAMIDHINGVMAHYKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKL 167 (313)
T ss_dssp CHHHHTCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSEE
T ss_pred chhhhcCCHHHHHHHHHHHHHHHHHHcCCc--ceEEeeecccccCCCcccccCcHHHhhhHHHHHHHHHHHHhhCCCCEE
Confidence 3332 345677889999999999975 7889999999863211 1112 46889999999999999999
Q ss_pred EEeC
Q 009475 375 IMSN 378 (534)
Q Consensus 375 iv~~ 378 (534)
++.+
T Consensus 168 ~~Nd 171 (313)
T 1v0l_A 168 CYND 171 (313)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9864
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=98.40 E-value=1.7e-06 Score=100.70 Aligned_cols=116 Identities=17% Similarity=0.231 Sum_probs=84.5
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCC-CCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQ 308 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~-pG~qng~~~sg~~~g~~ 308 (534)
+.|++.||++|+|+||+. +. | + . +++++.|.++||+|+.++-.. .|...+. +.....
T Consensus 375 ~~dl~lmK~~G~N~IR~~----hy--p--~---~-------~~~ydlcDe~Gi~V~~E~~~~~~g~~~~~---~~~~~~- 432 (1010)
T 3bga_A 375 EQDIRLMKQHNINMVRNS----HY--P--T---H-------PYWYQLCDRYGLYMIDEANIESHGMGYGP---ASLAKD- 432 (1010)
T ss_dssp HHHHHHHHHTTCCEEEET----TS--C--C---C-------HHHHHHHHHHTCEEEEECSCBCGGGCSST---TCTTTC-
T ss_pred HHHHHHHHHCCCCEEEeC----CC--C--C---C-------HHHHHHHHHCCCEEEEccCccccCccccC---CcCCCC-
Confidence 568899999999999993 11 1 1 1 578899999999999987211 0000000 000011
Q ss_pred CCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 309 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 309 ~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
+...+.+.+.++.+.+|++++|+|++|.+.|||... ...+++++.||+.||+++|..+.
T Consensus 433 ---~~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpV~~~~ 491 (1010)
T 3bga_A 433 ---STWLTAHMDRTHRMYERSKNHPAIVIWSQGNEAGNG--------INFERTYDWLKSVEKGRPVQYER 491 (1010)
T ss_dssp ---GGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSSCCS--------HHHHHHHHHHHHHCSSSCEECGG
T ss_pred ---HHHHHHHHHHHHHHHHHhCCCCEEEEEECccCcCcH--------HHHHHHHHHHHHHCCCCcEEeCC
Confidence 355677888999999999999999999999999741 24678899999999999998763
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.40 E-value=2.5e-06 Score=97.15 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=85.6
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.|++.||++|+|+||+. +. | + -+++++.|.++||+|+.++... ...+ ....+
T Consensus 310 ~~dl~~~K~~G~N~iR~~----h~--p--~----------~~~~~dlcDe~GilV~~E~~~~--w~~~----~~~~~--- 362 (801)
T 3gm8_A 310 HYRLKLLKDMGCNAIRTS----HN--P--F----------SPAFYNLCDTMGIMVLNEGLDG--WNQP----KAADD--- 362 (801)
T ss_dssp HHHHHHHHHTTCCEEEET----TS--C--C----------CHHHHHHHHHHTCEEEEECCSS--SSSC----SSTTS---
T ss_pred HHHHHHHHHCCCcEEEec----CC--C--C----------cHHHHHHHHHCCCEEEECCchh--hcCC----CCccc---
Confidence 678999999999999993 11 1 1 1788999999999999996321 1110 00001
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
+.+...+...+..+.+.+|+++||+|+.|.+.||+.. .+ ..+++++++.+|+.||+++|..+.
T Consensus 363 ~~~~~~~~~~~~~~~mv~r~rNHPSIi~Ws~gNE~~g--~~----~~~~~~l~~~~k~~DptRpvt~~~ 425 (801)
T 3gm8_A 363 YGNYFDEWWQKDMTDFIKRDRNHPSIIMWSIGNEVTG--AT----PEIQHNLVSLFHQLDPDRPVTQGG 425 (801)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCSS--CC----HHHHHHHHHHHHHHCTTSCEEEET
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCeEEEEECccCCCC--cH----HHHHHHHHHHHHHHCCCCCEEEcc
Confidence 1123344555678899999999999999999999953 22 578899999999999999998764
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=98.38 E-value=9.6e-07 Score=90.55 Aligned_cols=134 Identities=14% Similarity=0.162 Sum_probs=92.9
Q ss_pred HHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCC-CCCCCCCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAA-PGSQNGNEHSATR 304 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~-pG~qng~~~sg~~ 304 (534)
++.+.+ +.+||.|++ .+.| ...+|.++ .| .++.+|++|++|+++||+|.... |.. |+.-.. +..|
T Consensus 29 ~~~~~~-~~~fn~vt~eN~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~W~~~-~~~g-- 99 (331)
T 1n82_A 29 MQKQLL-IDHVNSITAENHMKF-EHLQPEEG-KF---TFQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQ-DGQG-- 99 (331)
T ss_dssp HTHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCGGGGB-CSSS--
T ss_pred HHHHHH-HhcCCEEEECCcccH-HHhCCCCC-cc---ChHHHHHHHHHHHHCCCEEEEEeeecCCCCChhhcc-CCCC--
Confidence 455555 569999999 5654 45566543 34 36889999999999999997532 542 221110 0111
Q ss_pred CCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC----hHHH-----HHHHHHHHHHHHhcCCceEE
Q 009475 305 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----LDTL-----KSYYKAGYDAVRKYTSTAYV 374 (534)
Q Consensus 305 ~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~----~~~~-----~~~~~~~~~aIR~~~p~~~I 374 (534)
. ... +...+...++++.+++||++ .|.++++.|||...... ...| ..|.+.+++++|+.+|+..+
T Consensus 100 --~-~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~g~~~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~L 174 (331)
T 1n82_A 100 --H-FVSRDVLLERMKCHISTVVRRYKG--KIYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDALL 174 (331)
T ss_dssp --S-BCCHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEE
T ss_pred --C-CCCHHHHHHHHHHHHHHHHHHhcC--CceEEeeecccccCCCccccccchHHHhcCHHHHHHHHHHHHHHCCCCEE
Confidence 1 122 35567888999999999999 58899999999863211 1122 36889999999999999998
Q ss_pred EEeC
Q 009475 375 IMSN 378 (534)
Q Consensus 375 iv~~ 378 (534)
++.+
T Consensus 175 ~~Nd 178 (331)
T 1n82_A 175 FYND 178 (331)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8864
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.34 E-value=1.3e-06 Score=88.47 Aligned_cols=125 Identities=15% Similarity=0.291 Sum_probs=90.7
Q ss_pred HHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCCCCCCCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATRD 305 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qng~~~sg~~~ 305 (534)
.+.+.| +.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|.... |. |
T Consensus 30 ~~~~~~-~~~fn~vt~en~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~----q---------- 89 (303)
T 1ta3_B 30 QNEAIV-ASQFGVITPENSMKW-DALEPSQG-NF---GWSGADYLVDYATQHNKKVRGHTLVWHS----Q---------- 89 (303)
T ss_dssp HHHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSS----S----------
T ss_pred HHHHHH-HhhCCEEEECccccH-HHhCCCCC-cc---CchHHHHHHHHHHHCCCEEEEeeccccC----C----------
Confidence 344445 679999998 5655 45566543 34 46889999999999999987543 32 1
Q ss_pred CCCCCC------hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHhcCCce
Q 009475 306 GFQEWG------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 306 g~~~W~------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~ 372 (534)
.|.|- +...+...+.++.+++||++. |.+||+.|||...... ...| ..|.+.+++++|+.+|+.
T Consensus 90 -~P~W~~~~~~~~~~~~~~~~~i~~v~~rY~g~--v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a 166 (303)
T 1ta3_B 90 -LPSWVSSIGDANTLRSVMTNHINEVVGRYKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDA 166 (303)
T ss_dssp -CCHHHHTCCCHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTS
T ss_pred -CChhhhcCCCHHHHHHHHHHHHHHHHHhcCCc--ceEEEeecCcccCCCCcccchHHHhccHHHHHHHHHHHHHHCCCC
Confidence 12232 234577889999999999985 8889999999753211 0122 378899999999999999
Q ss_pred EEEEeC
Q 009475 373 YVIMSN 378 (534)
Q Consensus 373 ~Iiv~~ 378 (534)
.+++.+
T Consensus 167 ~L~~Nd 172 (303)
T 1ta3_B 167 KLYIND 172 (303)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 999864
|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=3.3e-07 Score=99.88 Aligned_cols=114 Identities=21% Similarity=0.256 Sum_probs=87.6
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC--CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
-+||..| ++|++.||++|+|+.|+.|.| ...-|+. ..+.++..++..+++|+.|.++||..+|+|||..-.+.=.
T Consensus 72 ~D~Yhry--~EDi~Lm~elG~~~yRfSIsW-sRI~P~G~~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H~dlP~~L~ 148 (540)
T 4a3y_A 72 VDSYHLY--KEDVNILKNLGLDAYRFSISW-SRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALE 148 (540)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH
T ss_pred cchhHhh--HHHHHHHHHcCCCEEEeeccH-hhcccCCCCCCCCCHHHHHHHHHHHHHHHHcCCccceeccCCCCcHHHH
Confidence 4566666 899999999999999999997 3444543 2467788999999999999999999999999874211000
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+....|. +...+.|.++-+.+.+||++.-.. |=.+|||.
T Consensus 149 ------~~yGGW~nr~~v~~F~~Ya~~~f~~fgdrVk~--W~T~NEP~ 188 (540)
T 4a3y_A 149 ------DEYGGFLSPRIVDDFCEYAELCFWEFGDRVKH--WMTLNEPW 188 (540)
T ss_dssp ------HHHCGGGSTHHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred ------hccCCcCChHHHHHHHHHHHHHHHHhccccCE--eeEccccH
Confidence 0012455 678899999999999999997433 44789995
|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
Probab=98.32 E-value=3.5e-06 Score=90.76 Aligned_cols=147 Identities=21% Similarity=0.280 Sum_probs=100.0
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC----------------------------CCCCCchHHHHHHH
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP----------------------------KPFVGGSSKVLDNA 273 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~----------------------------~~~~~~~l~~ld~~ 273 (534)
+||+.| ++|++.||++|+|+.|+.|.|- ..-|++. ++..+..++..+++
T Consensus 58 d~yh~y--~eDi~l~~~mG~~~yRfSIsWs-RI~P~G~~~~~~~~e~~gd~~~~~~~~~g~~~~~~~~~N~~Gl~fY~~l 134 (489)
T 4ha4_A 58 GYWGNY--RKFHDAAQAMGLTAARIGVEWS-RIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYREM 134 (489)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHH-HHCSSCCTTSCCEEEEETTEEEEEECCHHHHHHHHHHSCHHHHHHHHHH
T ss_pred cHHHHH--HHHHHHHHHcCCCEEEeeccHH-hcCcCCCcccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence 355555 8999999999999999999973 3334321 12355689999999
Q ss_pred HHHHHHCCCEEEEEcCCCCCCCCCCCC----CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC--
Q 009475 274 FDWAEKYGVKVIVDLHAAPGSQNGNEH----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA-- 346 (534)
Q Consensus 274 v~~a~~~Gl~VIlDlH~~pG~qng~~~----sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~-- 346 (534)
|+.|.++||..+|+|||..-.|.-.+. -|.......|. +...+.|.++-+.+.+||++.-.. |=.+|||..
T Consensus 135 id~Ll~~GIeP~VTL~H~DlP~~L~d~~~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgdrVk~--W~T~NEp~~~~ 212 (489)
T 4ha4_A 135 FSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVRTVIEFAKFSAYVAWKLDDLVYM--YSTMNEPNVVW 212 (489)
T ss_dssp HHHHHHTTCEEEEESCSSCCBTTTBCHHHHHTTCTTSCBGGGSHHHHHHHHHHHHHHHHHHGGGCSE--EEEEECHHHHH
T ss_pred HHHHHHcCCeeeEeecCCCchHHHhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCccce--EEEeccchhhh
Confidence 999999999999999986433221110 00001123576 778889999999999999997433 447899952
Q ss_pred ------------CC-CCh-------HHHHHHHHHHHHHHHhcCCceE
Q 009475 347 ------------PG-VAL-------DTLKSYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 347 ------------~~-~~~-------~~~~~~~~~~~~aIR~~~p~~~ 373 (534)
++ .+. ..+.....++++++|+..+..+
T Consensus 213 ~~gy~~~~~~~~p~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~~i 259 (489)
T 4ha4_A 213 GLGYAAVKSGFPPGYLCLECAGRAMKNLVQAHARAYDAVKAITKKPV 259 (489)
T ss_dssp HHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCE
T ss_pred cccccccccCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCce
Confidence 11 111 1233445677888898877643
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.3e-06 Score=90.56 Aligned_cols=140 Identities=14% Similarity=0.170 Sum_probs=93.1
Q ss_pred HHHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CC-CCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HA-APGSQNGNEHSAT 303 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~-~pG~qng~~~sg~ 303 (534)
.++.+.+ ..+||.|++ .+. |...+|.++ .| .++.+|++|++|+++||+|+... |. .|..-.. +..|.
T Consensus 29 ~~~~~l~-~~~fn~vt~en~~k-W~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~W~~~-~~~g~ 101 (356)
T 2dep_A 29 GQIAELY-KKHVNMLVAENAMK-PASLQPTEG-NF---QWADADRIVQFAKENGMELRFHTLVWHNQTPDWFFL-DKEGK 101 (356)
T ss_dssp HHHHHHH-HHHCSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCGGGGB-CTTSS
T ss_pred HHHHHHH-HhhCCEEEECCccc-HHHhcCCCC-cc---CchHHHHHHHHHHHCCCEEEEeeccccccCchhhhc-cCcCC
Confidence 3455555 689999999 555 455566543 44 46889999999999999997643 53 2321110 00111
Q ss_pred CC--C-CC---CCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC----ChHHH-----HHHHHHHHHHHHh
Q 009475 304 RD--G-FQ---EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRK 367 (534)
Q Consensus 304 ~~--g-~~---~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~ 367 (534)
+. + .. ... +...+...+.++.|++||++ .|..|+++|||..... ....| ..|.+.+++++|+
T Consensus 102 ~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~ 179 (356)
T 2dep_A 102 PMVEETDPQKREENRKLLLQRLENYIRAVVLRYKD--DIKSWDVVNEVIEPNDPGGMRNSPWYQITGTEYIEVAFRATRE 179 (356)
T ss_dssp BGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEECCBCTTSGGGBCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCCCCCccCChHHHhccHHHHHHHHHHHHH
Confidence 00 0 00 011 23456788899999999998 5888999999986331 00122 3688999999999
Q ss_pred -cCCceEEEEeC
Q 009475 368 -YTSTAYVIMSN 378 (534)
Q Consensus 368 -~~p~~~Iiv~~ 378 (534)
.+|+..+++.+
T Consensus 180 ~~dP~a~L~~Nd 191 (356)
T 2dep_A 180 AGGSDIKLYIND 191 (356)
T ss_dssp HHCSSSEEEEEE
T ss_pred hcCCCcEEEecc
Confidence 99999999865
|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=3.2e-06 Score=98.95 Aligned_cols=123 Identities=20% Similarity=0.245 Sum_probs=89.7
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.|++.||++|+|+||+ -++ + + + ++..++|.++||+|+-|+......+... ......+.
T Consensus 377 ~~dl~~~k~~g~N~iR~-~h~-----~-~--~---------~~fydlcDelGilVw~e~~~~~~w~~~~---~~~~~~~~ 435 (1032)
T 2vzs_A 377 ADKLKYVLNLGLNTVRL-EGH-----I-E--P---------DEFFDIADDLGVLTMPGWECCDKWEGQV---NGEEKGEP 435 (1032)
T ss_dssp HHHHHHHHHTTCCEEEE-ESC-----C-C--C---------HHHHHHHHHHTCEEEEECCSSSGGGTTT---STTSSSCC
T ss_pred HHHHHHHHHcCCCEEEC-CCC-----C-C--c---------HHHHHHHHHCCCEEEEcccccccccccC---CCCCcccc
Confidence 56888899999999999 211 1 1 1 6788999999999999984321110000 00012245
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCC
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 380 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~ 380 (534)
|.+...+.+.+-++.+.+|+++||.|+.|.+.||+... ..+.+.+.+.+|+.||++++..+.++
T Consensus 436 ~~~~~~~~~~~~~~~~V~R~rNHPSIi~Ws~gNE~~~~-------~~~~~~~~~~~k~~DptRpv~~~s~~ 499 (1032)
T 2vzs_A 436 WVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPD-------RRIEQGYLDAMKAADFLLPVIPAASA 499 (1032)
T ss_dssp CCTTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCCC-------HHHHHHHHHHHHHTTCCSCEESCSSS
T ss_pred cChhHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCch-------HHHHHHHHHHHHHhCCCCeEEecCCC
Confidence 66666777888899999999999999999999999742 24556678889999999999876544
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1.1e-06 Score=93.51 Aligned_cols=130 Identities=17% Similarity=0.297 Sum_probs=94.2
Q ss_pred HHHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGF 307 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~ 307 (534)
+++++.|...+||.|++ .+.| ...+|.++ .| .+..+|+++++|+++||+|.. |..- +|+ ..
T Consensus 27 ~~~~~~~~~~~fn~~t~en~~kw-~~~ep~~g-~~---~f~~~D~~~~~a~~~gi~v~g--htlv------W~~----q~ 89 (436)
T 2d1z_A 27 DSAYTTIASREFNMVTAENEMKI-DATEPQRG-QF---NFSAGDRVYNWAVQNGKQVRG--HTLA------WHS----QQ 89 (436)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--EEEE------CST----TC
T ss_pred CHHHHHHHHHhCCeeeecccccc-ccccCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--EEEE------eCC----CC
Confidence 36788888899999999 4554 45566543 34 468899999999999999853 3320 010 12
Q ss_pred CCCC-----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC-------hHHH-HHHHHHHHHHHHhcCCceEE
Q 009475 308 QEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA-------LDTL-KSYYKAGYDAVRKYTSTAYV 374 (534)
Q Consensus 308 ~~W~-----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~-------~~~~-~~~~~~~~~aIR~~~p~~~I 374 (534)
|.|- +...+.+.+.++.+++||++ .|..+++.|||.....+ ...+ ..|++.+++++|+.+|+..+
T Consensus 90 P~W~~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~w~v~NE~~~~~~~g~~~~~~~~~~g~~~i~~af~~Ar~~dP~a~l 167 (436)
T 2d1z_A 90 PGWMQSLSGSTLRQAMIDHINGVMGHYKG--KIAQWDVVSHAFSDDGSGGRRDSNLQRTGNDWIEVAFRTARAADPAAKL 167 (436)
T ss_dssp CHHHHTCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEESCBCSSSSCCBCCCTTGGGCTTHHHHHHHHHHHHCTTSEE
T ss_pred chhhhcCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEeecccccCCCCccccCchhhhcchHHHHHHHHHHHhhCCCCEE
Confidence 3332 35567788999999999997 57789999999753211 1122 47899999999999999999
Q ss_pred EEeC
Q 009475 375 IMSN 378 (534)
Q Consensus 375 iv~~ 378 (534)
++.+
T Consensus 168 ~~Nd 171 (436)
T 2d1z_A 168 CYND 171 (436)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8864
|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.1e-06 Score=94.65 Aligned_cols=119 Identities=15% Similarity=0.192 Sum_probs=85.8
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC---------------------------CCCCCchHHHHHHHH
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP---------------------------KPFVGGSSKVLDNAF 274 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~---------------------------~~~~~~~l~~ld~~v 274 (534)
+||+.| ++|++.||++|+|+.|+.|.|- ..-|+.. ++..+..++..+++|
T Consensus 58 d~Yh~y--~eDi~l~~elG~~~yRfSIsWs-RI~P~G~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~~N~~Gl~fY~~li 134 (489)
T 1uwi_A 58 GYWGNY--KTFHNNAQKMGLKIARLNSEWS-RQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIF 134 (489)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHH-HHCCSCCCCCTTCCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred chhhhH--HHHHHHHHHcCCCEEEEeCcHH-HCCCCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 356555 8999999999999999999973 3333321 234566899999999
Q ss_pred HHHHHCCCEEEEEcCCCCCCCCCCCC----CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 275 DWAEKYGVKVIVDLHAAPGSQNGNEH----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 275 ~~a~~~Gl~VIlDlH~~pG~qng~~~----sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
+.+.++||..+|+|||..-.|.=.+. .|.......|. +...+.|.++-+.+.+||++.-.. |=.+|||.
T Consensus 135 d~Ll~~GIeP~VTL~H~DlP~~L~d~y~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgdrVk~--W~T~NEp~ 208 (489)
T 1uwi_A 135 KDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYTAWKFDDLVDE--YSTMNEPN 208 (489)
T ss_dssp HHHHHTTCEEEEESCCSCCBGGGBCHHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTTTCSE--EEEEECHH
T ss_pred HHHHHcCCcceEEeecCCccHHHHHhhhhcccccccCCCcCCHHHHHHHHHHHHHHHHHhCCccCe--EEEecCch
Confidence 99999999999999986432211000 00000123576 788899999999999999997443 44789995
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.7e-06 Score=87.60 Aligned_cols=127 Identities=17% Similarity=0.316 Sum_probs=89.3
Q ss_pred HHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 232 DFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 232 d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.+.+ +.+||.|++ .+.| ...+|.++ .| .+..+|++|++|+++||+|.... .- +|+ ..|.
T Consensus 32 ~~~~~-~~~fn~vt~en~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ght--l~------W~~----q~P~ 93 (303)
T 1i1w_A 32 NAAII-QANFGQVTPENSMKW-DATEPSQG-NF---NFAGADYLVNWAQQNGKLIRGHT--LV------WHS----QLPS 93 (303)
T ss_dssp HHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEE--EE------CST----TCCH
T ss_pred HHHHH-HhhCCEEEECccccH-HHhCCCCC-cc---ChhhHHHHHHHHHHCCCEEEEee--cc------ccC----CCCh
Confidence 34444 779999998 5554 55666543 44 46889999999999999986432 10 011 1223
Q ss_pred CC------hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHhcCCceEEEE
Q 009475 310 WG------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 310 W~------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Iiv 376 (534)
|- +...+...+.++.+++||++. |.+||+.|||...... ...| ..|.+.+++++|+.+|+..+++
T Consensus 94 W~~~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~L~~ 171 (303)
T 1i1w_A 94 WVSSITDKNTLTNVMKNHITTLMTRYKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYI 171 (303)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEE
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhcCCc--eeEEEeecCccCCCCCcccchHHHhcCHHHHHHHHHHHHHHCCCCeEEe
Confidence 32 234677889999999999986 8889999999753211 1122 3578999999999999999988
Q ss_pred eC
Q 009475 377 SN 378 (534)
Q Consensus 377 ~~ 378 (534)
.+
T Consensus 172 Nd 173 (303)
T 1i1w_A 172 ND 173 (303)
T ss_dssp EE
T ss_pred cc
Confidence 64
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=5.8e-06 Score=86.21 Aligned_cols=135 Identities=15% Similarity=0.202 Sum_probs=94.0
Q ss_pred HHHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEE-c--CCC-CCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD-L--HAA-PGSQNGNEHSAT 303 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlD-l--H~~-pG~qng~~~sg~ 303 (534)
+++.+.+ +.+||.||+ .+.| ...+|.++ .| .++.+|++|++|+++||+|... | |.. |+. -...
T Consensus 51 ~~~~~l~-~~~fn~vt~eN~~kW-~~~ep~~G-~~---~f~~~D~~v~~a~~~gi~vrgHtlvW~~q~P~W-----~~~d 119 (378)
T 1ur1_A 51 ERLNTLI-AKEFNSITPENCMKW-GVLRDAQG-QW---NWKDADAFVAFGTKHNLHMVGHTLVWHSQIHDE-----VFKN 119 (378)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSH-HHHBCTTC-CB---CCHHHHHHHHHHHHTTCEEEEEEEECSSSSCGG-----GTBC
T ss_pred HHHHHHH-HccCCeEEECCcccH-HHhcCCCC-cc---CchHHHHHHHHHHHCCCEEEeecccccccCchh-----hhcC
Confidence 4555566 569999999 5665 45566543 44 4688999999999999999653 2 542 221 1100
Q ss_pred CCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHhcCCceEEE
Q 009475 304 RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVI 375 (534)
Q Consensus 304 ~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Ii 375 (534)
..|. .+. +...+...+.++.+++||++ .|..|++.|||...+.+ ...| .+|.+.+++..|+.+|+..++
T Consensus 120 ~~g~-~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i~~af~~Ar~~dP~a~L~ 196 (378)
T 1ur1_A 120 ADGS-YISKAALQKKMEEHITTLAGRYKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLM 196 (378)
T ss_dssp TTSC-BCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCC-CCCHHHHHHHHHHHHHHHHHHhCC--cceEEEeecccccCCCCccCChhhhhccHHHHHHHHHHHHHhCCCCEEE
Confidence 0011 123 45567888999999999999 68889999999863211 1122 368899999999999999988
Q ss_pred EeC
Q 009475 376 MSN 378 (534)
Q Consensus 376 v~~ 378 (534)
+.+
T Consensus 197 ~Nd 199 (378)
T 1ur1_A 197 YND 199 (378)
T ss_dssp EEE
T ss_pred ecc
Confidence 864
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=98.18 E-value=2.9e-06 Score=91.59 Aligned_cols=136 Identities=15% Similarity=0.208 Sum_probs=94.5
Q ss_pred HHHHHHHHhCCccEEEeC--cccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEE---cCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD---LHAAPGSQNGNEHSATR 304 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIP--v~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlD---lH~~pG~qng~~~sg~~ 304 (534)
+++.+.| +.+||.|++. +. |...+|.++ .| .+..+|+++++|+++||+|... .|. + .|.+.+-.. .
T Consensus 195 ~~~~~l~-~~~FN~vT~eNemK-W~~iEP~~G-~~---~f~~~D~ivd~a~~nGi~VrgHtLvWhs-~-~q~P~Wv~~-~ 265 (530)
T 1us2_A 195 SREQAVV-KKHFNHLTAGNIMK-MSYMQPTEG-NF---NFTNADAFVDWATENNMTVHGHALVWHS-D-YQVPNFMKN-W 265 (530)
T ss_dssp HHHHHHH-HHHCSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECCC-G-GGSCHHHHT-C
T ss_pred HHHHHHH-HhhCCeEEECCccc-HHHhcCCCC-cc---CchHHHHHHHHHHHCCCEEEEecccccc-c-ccCchHHhc-C
Confidence 4566666 6799999995 44 455666543 34 4688999999999999998753 232 0 011101000 0
Q ss_pred CCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC----C--hHHHH-------HHHHHHHHHHHhcCC
Q 009475 305 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----A--LDTLK-------SYYKAGYDAVRKYTS 370 (534)
Q Consensus 305 ~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~----~--~~~~~-------~~~~~~~~aIR~~~p 370 (534)
.+ . +...++..+.++.+++||++++.|..|++.|||..... . ...|. .|++.+++.+|+.+|
T Consensus 266 ~G----s~~~l~~~~~~~I~~vv~rYk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w~~~lG~~~d~i~~AF~~Ar~aDP 341 (530)
T 1us2_A 266 AG----SAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADP 341 (530)
T ss_dssp CS----CHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEESCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCT
T ss_pred CC----CHHHHHHHHHHHHHHHHHHhCCCCceEEEEeecCcccCCccccccccCCHHHHHhCcHHHHHHHHHHHHHHHCC
Confidence 00 1 34567788999999999998888999999999986321 1 12232 789999999999999
Q ss_pred ceEEEEeC
Q 009475 371 TAYVIMSN 378 (534)
Q Consensus 371 ~~~Iiv~~ 378 (534)
+..+++.+
T Consensus 342 ~AkL~~ND 349 (530)
T 1us2_A 342 AVILYYND 349 (530)
T ss_dssp TSEEEEEE
T ss_pred CCEEEecc
Confidence 99998864
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=98.11 E-value=4.1e-06 Score=87.38 Aligned_cols=140 Identities=16% Similarity=0.219 Sum_probs=92.2
Q ss_pred HHHHHHHHhCCccEEEeC--cccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CC-CCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HA-APGSQNGNEHSAT 303 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIP--v~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~-~pG~qng~~~sg~ 303 (534)
+++.+.| ..+||.|++- +. |...+|.++ .| .+..+|++|++|+++||+|.... |. .|..-.. +..|.
T Consensus 42 ~~~~~l~-~~~fn~vt~eNe~k-W~~~ep~~G-~~---~f~~~D~~v~~a~~~gi~vrghtlvW~~q~P~W~~~-~~~G~ 114 (379)
T 1r85_A 42 EKDVQML-KRHFNSIVAENVMK-PISIQPEEG-KF---NFEQADRIVKFAKANGMDIRFHTLVWHSQVPQWFFL-DKEGK 114 (379)
T ss_dssp HHHHHHH-HHHCSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEECSCCSTTCCGGGGB-CTTSS
T ss_pred HHHHHHH-HhhCCeEEECCccc-HHHhcCCCC-cc---CchhHHHHHHHHHHCCCEEEEecccccccCchhhhc-CcCCc
Confidence 4555556 6699999994 55 445566543 34 46889999999999999987643 32 1221100 00111
Q ss_pred CC--CC-C---CCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHh-c
Q 009475 304 RD--GF-Q---EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRK-Y 368 (534)
Q Consensus 304 ~~--g~-~---~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~-~ 368 (534)
+. |. . ... +...++..++++.|++||++ .|..|+++|||...+.. ...| ..|...+++..|+ .
T Consensus 115 ~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdV~NE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~a 192 (379)
T 1r85_A 115 PMVNETDPVKREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYG 192 (379)
T ss_dssp BGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEeecccccCCCCccCchHHHhhhHHHHHHHHHHHHhhC
Confidence 00 00 0 001 23456778899999999999 68889999999863210 1122 3688999999999 9
Q ss_pred CCceEEEEeC
Q 009475 369 TSTAYVIMSN 378 (534)
Q Consensus 369 ~p~~~Iiv~~ 378 (534)
+|+..+++.+
T Consensus 193 dP~a~L~~ND 202 (379)
T 1r85_A 193 GDNIKLYMND 202 (379)
T ss_dssp CTTSEEEEEE
T ss_pred CCCCEEEecc
Confidence 9999999864
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=98.09 E-value=1.4e-05 Score=82.43 Aligned_cols=131 Identities=19% Similarity=0.198 Sum_probs=91.8
Q ss_pred HHHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEE---cCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD---LHAAPGSQNGNEHSATR 304 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlD---lH~~pG~qng~~~sg~~ 304 (534)
+++.+.| ..+||.|++ -+.| ...+|.++ | .+..+|++|++|+++||+|... .|. + .|...+-.. .
T Consensus 28 ~~~~~~~-~~~fn~vt~en~~kW-~~~ep~~G--~---~f~~~D~~v~~a~~~gi~v~ghtl~W~~-~-~q~P~W~~~-~ 97 (348)
T 1w32_A 28 SARQNIV-RAEFNQITAENIMKM-SYMYSGSN--F---SFTNSDRLVSWAAQNGQTVHGHALVWHP-S-YQLPNWASD-S 97 (348)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSG-GGGEETTE--E---CCHHHHHHHHHHHHTTCEEEEEEEECCC-G-GGCCTTCST-T
T ss_pred HHHHHHH-HhhCCeEEECCccch-hhhccCCC--C---CchHHHHHHHHHHHCCCEEEEEeeecCc-c-ccCchhhhc-C
Confidence 3455555 679999999 4444 45555543 4 3788999999999999998753 232 0 011111111 0
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-----C-----C------hHHH--HHHHHHHHHHHH
Q 009475 305 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----V-----A------LDTL--KSYYKAGYDAVR 366 (534)
Q Consensus 305 ~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~-----~-----~------~~~~--~~~~~~~~~aIR 366 (534)
.+...+...+.++.|++||++ .|..|+++|||.... . . .+.+ ..|...+++..|
T Consensus 98 ------~~~~~~~~~~~i~~v~~rY~g--~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~~~~~lgG~~~i~~aF~~Ar 169 (348)
T 1w32_A 98 ------NANFRQDFARHIDTVAAHFAG--QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRAR 169 (348)
T ss_dssp ------CTTHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCccccCCcccccccccchHHHhcCchHHHHHHHHHHH
Confidence 124678889999999999997 688899999998632 1 0 1233 578899999999
Q ss_pred hcCCceEEEEeC
Q 009475 367 KYTSTAYVIMSN 378 (534)
Q Consensus 367 ~~~p~~~Iiv~~ 378 (534)
+.+|+..+++.+
T Consensus 170 ~adP~a~L~~ND 181 (348)
T 1w32_A 170 AADPTAELYYND 181 (348)
T ss_dssp HHCTTSEEEEEE
T ss_pred HhCCCCEEEecc
Confidence 999999998864
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=9.3e-06 Score=83.99 Aligned_cols=136 Identities=15% Similarity=0.218 Sum_probs=90.7
Q ss_pred HHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEE-c--CCCCCCCCCCCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD-L--HAAPGSQNGNEHSATRD 305 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlD-l--H~~pG~qng~~~sg~~~ 305 (534)
++.+.| +.+||.|++ .+.| ...+|.++ .| .+..+|++|++|+++||+|... | |. |...+-.....
T Consensus 33 ~~~~l~-~~~fn~vt~en~~kW-~~~ep~~G-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~----q~P~W~~~~~~ 102 (356)
T 2uwf_A 33 RQAQIL-KHHYNSLVAENAMKP-VSLQPREG-EW---NWEGADKIVEFARKHNMELRFHTLVWHS----QVPEWFFIDEN 102 (356)
T ss_dssp HHHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEECCSEESS----SCCGGGGBCTT
T ss_pred HHHHHH-HhcCCEEEECCcccH-HHhcCCCC-cc---CchHHHHHHHHHHHCCCEEEEeeccccc----cCchhHhcCCC
Confidence 444444 789999999 5554 45566543 34 4688999999999999998653 2 32 22211110001
Q ss_pred CCC----------CCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHh
Q 009475 306 GFQ----------EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRK 367 (534)
Q Consensus 306 g~~----------~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~ 367 (534)
|.+ ... +...+...+.++.+++||++ .|.+|++.|||...+.+ ...| ..|+..+++..|+
T Consensus 103 G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~v~~wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~ 180 (356)
T 2uwf_A 103 GNRMVDETDPEKRKANKQLLLERMENHIKTVVERYKD--DVTSWDVVNEVIDDDGGLRESEWYQITGTDYIKVAFETARK 180 (356)
T ss_dssp SCBGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CcccccccccccCCCCHHHHHHHHHHHHHHHHHHcCC--cceEEEeecccccCCCCcccchHHhhccHHHHHHHHHHHHh
Confidence 110 001 23446778899999999997 68889999999863211 1112 3688999999999
Q ss_pred -cCCceEEEEeC
Q 009475 368 -YTSTAYVIMSN 378 (534)
Q Consensus 368 -~~p~~~Iiv~~ 378 (534)
.+|+..+++.+
T Consensus 181 ~~dP~a~L~~Nd 192 (356)
T 2uwf_A 181 YGGEEAKLYIND 192 (356)
T ss_dssp HHCTTCCEEEEE
T ss_pred hCCCCCEEEecc
Confidence 99999988864
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=97.86 E-value=3.9e-05 Score=78.78 Aligned_cols=161 Identities=12% Similarity=0.180 Sum_probs=105.2
Q ss_pred CHHHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEE---EcCCCCCCCCCCCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSAT 303 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIl---DlH~~pG~qng~~~sg~ 303 (534)
.+...+.+-...||.|.. .+-| ...+|.++ .| .++..|++|++|+++||.|.. -.|. |.+.+-.
T Consensus 46 ~~~~y~~~~~~~Fn~~t~eN~mKW-~~iep~~G-~~---~f~~~D~~v~~a~~~gi~vrgHtLvWh~----q~P~W~~-- 114 (341)
T 3niy_A 46 DEEKYMEVARREFNILTPENQMKW-DTIHPERD-RY---NFTPAEKHVEFAEENNMIVHGHTLVWHN----QLPGWIT-- 114 (341)
T ss_dssp THHHHHHHHHHHCSEEEESSTTSH-HHHCCBTT-EE---ECHHHHHHHHHHHHTTCEEEEEEEECSS----SCCHHHH--
T ss_pred CCHHHHHHHHHhCCEEEECcccch-HHhcCCCC-cc---ChHHHHHHHHHHHHCCCeEEeeeccccc----cCchhhh--
Confidence 355566666678999998 5554 45566543 33 467899999999999999853 3353 1111110
Q ss_pred CCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHhcCCceEEE
Q 009475 304 RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVI 375 (534)
Q Consensus 304 ~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Ii 375 (534)
...|. +...+.+.+.++.+++||++. |..||++|||...+.+ ...| ..|...++++.|+.+|+..++
T Consensus 115 ---~~~~~~~~~~~~~~~~i~~v~~rY~g~--i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~dP~a~L~ 189 (341)
T 3niy_A 115 ---GREWTKEELLNVLEDHIKTVVSHFKGR--VKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWTKEADPDAILI 189 (341)
T ss_dssp ---TSCCCHHHHHHHHHHHHHHHHHHTTTT--CCEEEEEECCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEE
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHcCCC--ccEEEEecccccccccccccchhhhcCHHHHHHHHHHHHHHCCCceEE
Confidence 01234 455678889999999999984 7789999999863211 1122 368899999999999999999
Q ss_pred EeCCC-CCCC--hhhhhc-------ccCCCceEEEEEeec
Q 009475 376 MSNRL-GPAD--HKELLS-------FASGLSRVVIDVHYY 405 (534)
Q Consensus 376 v~~~~-~~~~--~~~~~~-------~~~~~~nvv~d~H~Y 405 (534)
+.+.- .... ...+.. --.+-+.|-+..|..
T Consensus 190 ~NDyn~e~~~~k~~~~~~lv~~l~~~GvpIdgIG~Q~H~~ 229 (341)
T 3niy_A 190 YNDYSIEEINAKSNFVYNMIKELKEKGVPVDGIGFQMHID 229 (341)
T ss_dssp EEESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEE
T ss_pred eeccccccCchHHHHHHHHHHHHHHCCCCcceEeeeeecC
Confidence 86421 1111 111111 113467888999975
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0002 Score=76.23 Aligned_cols=130 Identities=16% Similarity=0.137 Sum_probs=90.6
Q ss_pred HHHHHHHHhCCccEEEeCcc----cccccCC--CCCC----CCCC----chHHHHHHHHHHHHHCCCEEEEEcCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVG----WWIANDP--TPPK----PFVG----GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ 295 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~----~w~~~~~--~~~~----~~~~----~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~q 295 (534)
+..++..++.|||+||+-+- -+..... -... .+.+ .+++.+|++|+.|.++||++-|=+-. |..
T Consensus 55 ~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g~~pf~~~~df~~~n~pn~~~YF~h~d~~I~~a~~~Gi~~~Lv~~W--g~~ 132 (463)
T 3kzs_A 55 EYYLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSMTDGYNFKNINQKGVYGYWDHMDYIIRTAAKKGLYIGMVCIW--GSP 132 (463)
T ss_dssp HHHHHHHHHTTCCEEEEESCSSSSCBCTTSCBSCSSTTCCTTCCCTTCCCHHHHHHHHHHHHHHTTCEEEEESSC--HHH
T ss_pred HHHHHHHHHCCCCEEEEEeecCCCCCCcCCCCCcCCCcccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEEe--CCc
Confidence 56788899999999999772 1111110 0000 1222 69999999999999999999874431 100
Q ss_pred CCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEE
Q 009475 296 NGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 375 (534)
Q Consensus 296 ng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Ii 375 (534)
...+ .-+.+....+++.|++||++.++|+ |-|-||=... .. .+..+++.+.|++.+|++++.
T Consensus 133 ---v~~~---------~m~~e~~~~Y~ryl~~Ry~~~~Nii-W~lgGD~~~~-~~----~~~w~~~~~~i~~~dp~~L~T 194 (463)
T 3kzs_A 133 ---VSHG---------EMNVDQAKAYGKFLAERYKDEPNII-WFIGGDIRGD-VK----TAEWEALATSIKAIDKNHLMT 194 (463)
T ss_dssp ---HHTT---------SCCHHHHHHHHHHHHHHHTTCSSEE-EEEESSSCTT-SS----HHHHHHHHHHHHHHCCSSCEE
T ss_pred ---cccC---------CCCHHHHHHHHHHHHHHhccCCCCE-EEeCCCCCCc-cC----HHHHHHHHHHHHhcCCCCcEE
Confidence 0000 1246778899999999999999998 8999997642 22 345566678899999999999
Q ss_pred EeCC
Q 009475 376 MSNR 379 (534)
Q Consensus 376 v~~~ 379 (534)
+++.
T Consensus 195 ~H~~ 198 (463)
T 3kzs_A 195 FHPR 198 (463)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9863
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=3.8e-05 Score=78.54 Aligned_cols=161 Identities=14% Similarity=0.210 Sum_probs=101.8
Q ss_pred HHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCC-CCCCCCCCCCCCCCCCCC
Q 009475 234 KFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEHSATRDGFQEW 310 (534)
Q Consensus 234 ~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~p-G~qng~~~sg~~~g~~~W 310 (534)
..+....||.|.. .+-| ...+|.++ .| .++..|++|++|+++||.|.. |..- .+|...+-.....| ..+
T Consensus 30 ~~~~~~~Fn~~t~eN~mKW-~~iep~~G-~~---~f~~~D~~v~~a~~~gi~vrg--HtLvWh~q~P~W~~~~~~g-~~~ 101 (331)
T 3emz_A 30 GEFIAKHYNSVTAENQMKF-EEVHPREH-EY---TFEAADEIVDFAVARGIGVRG--HTLVWHNQTPAWMFEDASG-GTA 101 (331)
T ss_dssp HHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHTTTCEEEE--CCSBCSSSCCGGGGBCTTS-SBC
T ss_pred HHHHHHhCCEEEECcccch-hhhcCCCC-cc---ChhHHHHHHHHHHHCCCEEee--eeeeccccCcHhHhccccC-CCC
Confidence 4555668999998 5544 45566543 34 467889999999999999854 3221 11222221100001 112
Q ss_pred C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC----hHHH-----HHHHHHHHHHHHhcCCceEEEEeCCC
Q 009475 311 G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----LDTL-----KSYYKAGYDAVRKYTSTAYVIMSNRL 380 (534)
Q Consensus 311 ~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~----~~~~-----~~~~~~~~~aIR~~~p~~~Iiv~~~~ 380 (534)
. +...+.+.+.++.+++||++ .|..||++|||.....+ ...| ..|...++++.|+.+|+..+++.+.
T Consensus 102 ~~~~l~~~~~~~I~~v~~rYkg--~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~~i~~aF~~Ar~adP~a~L~~NDy- 178 (331)
T 3emz_A 102 SREMMLSRLKQHIDTVVGRYKD--QIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAFNMAHEADPNALLFYNDY- 178 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCSSTTCCBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEES-
T ss_pred CHHHHHHHHHHHHHHHHHHhCC--CceEEEEeccccCCCCCccccCCchhhhcCHHHHHHHHHHHHhhCCCceEEeccc-
Confidence 3 34566788999999999998 57889999999864211 1122 3688999999999999999998642
Q ss_pred CCCCh---hh---hh----cccCCCceEEEEEeec
Q 009475 381 GPADH---KE---LL----SFASGLSRVVIDVHYY 405 (534)
Q Consensus 381 ~~~~~---~~---~~----~~~~~~~nvv~d~H~Y 405 (534)
..... .. +. .--.+-+.|-+..|..
T Consensus 179 n~~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~ 213 (331)
T 3emz_A 179 NETDPVKREKIYNLVRSLLDQGAPVHGIGMQGHWN 213 (331)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHTCCCCEEEECCEEE
T ss_pred cccChHHHHHHHHHHHHHHHCCCccceEEECceec
Confidence 11111 11 11 1113467889999974
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00012 Score=74.75 Aligned_cols=135 Identities=20% Similarity=0.206 Sum_probs=94.5
Q ss_pred HHHHHHHHhCCccEEEeCc-cc--ccccCCCC---CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPV-GW--WIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 303 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv-~~--w~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~ 303 (534)
+++|+.||++|++.|=|.- ++ +... |.. .........+.|+.+++.|+++||+|.+.++..+.. ++.+
T Consensus 57 ~~~~~~mK~~GikyvIl~~~~~~gf~~~-pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~~----W~~~- 130 (340)
T 4h41_A 57 DLDFQHMKRIGIDTVIMIRSGYRKFMTY-PSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDSGRY----WDTG- 130 (340)
T ss_dssp HHHHHHHHHTTCCEEEESCSEETTEESS-CCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBCSHH----HHHS-
T ss_pred HHHHHHHHHcCCCEEEEEEEeeCCeecc-CcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCChhh----cCCC-
Confidence 7899999999999885532 11 1111 100 001111245779999999999999999998754311 1111
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhc-CCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCC
Q 009475 304 RDGFQEWGDSNVADTVAVIDFLAARYA-NRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 379 (534)
Q Consensus 304 ~~g~~~W~~~~~~~~~~~w~~lA~ryk-~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~ 379 (534)
. .....+....+.+.|.++|. ++|++.||-|-||+.... .....+++.+.+.+++..++.++++++.
T Consensus 131 ---d---~~~e~e~~~~~i~El~~~Yg~~h~af~GWYi~~Ei~~~~---~~~~~~~~~l~~~lk~ls~~lp~~ISpy 198 (340)
T 4h41_A 131 ---D---LSWEIEDNKYVIDEVWKMYGEKYKSFGGWYISGEISRAT---KGAIDAFRAMGKQCKDISNGLPTFISPW 198 (340)
T ss_dssp ---C---GGGGHHHHHHHHHHHHHHTTTTCTTEEEEEECCCCSSCC---TTHHHHHHHHHHHHHHHTTSCCEEECCC
T ss_pred ---C---HHHHHHHHHHHHHHHHHHhhccCCCeeEEEeccccCchh---hhHHHHHHHHHHHHHHhcCCCceEEeec
Confidence 1 12345667788999999997 689999999999997532 3346788999999999999999998863
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00024 Score=76.74 Aligned_cols=161 Identities=15% Similarity=0.153 Sum_probs=98.8
Q ss_pred CHHHHHHHHhCCccEEEeCc-------ccccccCCCCCCC------C--CCchHHHHHHHHHHHHHCCCEEEEEcCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPV-------GWWIANDPTPPKP------F--VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 293 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv-------~~w~~~~~~~~~~------~--~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG 293 (534)
.++-++.++++|+..||+|= .|.....|....| + .+...--+|+++++|++.|+.+++-+..-++
T Consensus 53 R~d~~~~l~~l~~~~iR~pGG~f~d~y~W~d~igp~~~Rp~~~~~~W~~~~~n~~g~def~~~~~~~g~ep~~~vn~g~~ 132 (502)
T 1qw9_A 53 RQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTR 132 (502)
T ss_dssp BHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSC
T ss_pred HHHHHHHHHhcCCCeEecCCCcccCcccccCCCCChHhCCCcccCCccccccCCCCHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 46778889999999999992 2221112211011 1 1111113699999999999999999865221
Q ss_pred CCCCCCCCCCCCCCCCCChhhHHHHHH--------HHHHHHHHhcC-CC-eEEEEEeccCCCCC----CCChHHHHHHHH
Q 009475 294 SQNGNEHSATRDGFQEWGDSNVADTVA--------VIDFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYK 359 (534)
Q Consensus 294 ~qng~~~sg~~~g~~~W~~~~~~~~~~--------~w~~lA~ryk~-~~-~vlg~eL~NEP~~~----~~~~~~~~~~~~ 359 (534)
. ......+++ .|..+-.+|+. .| .|--|||.|||... ..+.+.+.+.+.
T Consensus 133 -------------~----~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~v~yweiGNE~~g~w~~g~~t~~~Y~~~~~ 195 (502)
T 1qw9_A 133 -------------G----IDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIAC 195 (502)
T ss_dssp -------------C----HHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHHH
T ss_pred -------------C----HHHHHHHHHHhCCCCCCcHHHHHHHcCCCCCCCCeEEEEeCCCCCCcCCCCcCHHHHHHHHH
Confidence 0 122222332 35556667754 34 67789999999842 236788999999
Q ss_pred HHHHHHHhcCCceEEEEeCCCCC-----CCh-hhhhcccCCCceEEEEEeeccc
Q 009475 360 AGYDAVRKYTSTAYVIMSNRLGP-----ADH-KELLSFASGLSRVVIDVHYYNL 407 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv~~~~~~-----~~~-~~~~~~~~~~~nvv~d~H~Y~~ 407 (534)
+..++||+++|+..|+..+.... ..| ..++... ...=-.+++|+|..
T Consensus 196 ~~a~aik~~dP~i~via~G~~~~~~p~~~~W~~~~l~~~-~~~vD~is~H~Y~~ 248 (502)
T 1qw9_A 196 EAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDHT-YDHVDYISLHQYYG 248 (502)
T ss_dssp HHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHH-GGGCSEEEEEEEEC
T ss_pred HHHHHHHHhCCCeEEEEeCCCcccCcccCchHHHHHHhc-ccCCCEEEEeeCCC
Confidence 99999999999977765432111 111 1222221 22345789999953
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00024 Score=72.54 Aligned_cols=161 Identities=14% Similarity=0.158 Sum_probs=101.7
Q ss_pred HHHHHHH--hCCccEEEeCcc-cccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEE---EcCCCCCCCCCCCCCCCC
Q 009475 231 EDFKFLS--SNGINAVRIPVG-WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSATR 304 (534)
Q Consensus 231 ~d~~~ia--~~G~N~VRIPv~-~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIl---DlH~~pG~qng~~~sg~~ 304 (534)
.....+- ..-||.|-.--. -|...+|.++ .| .+...|++|++|+++||.|.- -.|. |.+.+-..
T Consensus 27 ~~~~~~~~~~~~Fn~~t~eN~mKW~~iep~~G-~~---~f~~~D~~v~~a~~~gi~vrGHtLvWh~----q~P~W~~~-- 96 (327)
T 3u7b_A 27 QGEIDIINNKNEIGSITPENAMKWEAIQPNRG-QF---NWGPADQHAAAATSRGYELRCHTLVWHS----QLPSWVAN-- 96 (327)
T ss_dssp CHHHHHHTCTTTCCEEEESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHTTTCEEEEEEEEEST----TCCHHHHT--
T ss_pred HHHHHHHHhHhhCCeEEECccccHHHhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEEeeeecCC----cCcHHHhc--
Confidence 3455555 567888875211 2455566543 34 467789999999999999852 2242 21111110
Q ss_pred CCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHhcCCceEEEE
Q 009475 305 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 305 ~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Iiv 376 (534)
..|. +...+.+.+.++.+++||++. |..||++|||...+.+ ...| ..|...+++..|+.+|+..+++
T Consensus 97 ---~~~~~~~l~~~~~~~I~~v~~rY~g~--i~~WDVvNE~~~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~dP~a~L~~ 171 (327)
T 3u7b_A 97 ---GNWNNQTLQAVMRDHINAVMGRYRGK--CTHWDVVNEALNEDGTYRDSVFLRVIGEAYIPIAFRMALAADPTTKLYY 171 (327)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCTTSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEE
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhCCC--ceEEEEeccccCCCCCccccchhhhccHHHHHHHHHHHHhHCCCCeEEe
Confidence 0123 345667889999999999984 7889999999864211 0112 2688999999999999999999
Q ss_pred eCCC-CCCCh--hh---hhc----ccCCCceEEEEEeecc
Q 009475 377 SNRL-GPADH--KE---LLS----FASGLSRVVIDVHYYN 406 (534)
Q Consensus 377 ~~~~-~~~~~--~~---~~~----~~~~~~nvv~d~H~Y~ 406 (534)
.+.- ..... .. +.. -..+-+.|-+..|...
T Consensus 172 Ndyn~e~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~ 211 (327)
T 3u7b_A 172 NDYNLEYGNAKTEGAKRIARLVKSYGLRIDGIGLQAHMTS 211 (327)
T ss_dssp EESSCTTCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEES
T ss_pred ccccccCCchhhHHHHHHHHHHHHCCCCcceEEEcccccc
Confidence 7521 11111 11 111 1134678899999885
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0007 Score=73.30 Aligned_cols=161 Identities=12% Similarity=0.197 Sum_probs=98.3
Q ss_pred CHHHHHHHHhCCccEEEeCcc-----c-cc-ccCCCCCCC--------CCCchHHHHHHHHHHHHHCCCEEEEEcCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPVG-----W-WI-ANDPTPPKP--------FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 293 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~-----~-w~-~~~~~~~~~--------~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG 293 (534)
.++-++.++++|+..||+|=+ | |. ...|....| +.+...--+|+++++|++.|+.+++-+..-.+
T Consensus 61 R~dl~~~l~~l~~~~iR~PGG~f~d~y~W~d~iGp~~~Rp~~~~~~W~~~~~n~~G~def~~~~~~~G~ep~~~vn~g~~ 140 (513)
T 2c7f_A 61 RKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTR 140 (513)
T ss_dssp BHHHHHHHHHHCCSEEEESCSTTGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCTHHHHHHHHHTTCEEEEECCCSSC
T ss_pred HHHHHHHHHhcCCCeEEeCCCcccCcceecCCCCChHhCCccccCCccceecCCCCHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 467788899999999999922 1 21 112211001 11111113699999999999999998864211
Q ss_pred CCCCCCCCCCCCCCCCCChhhHHHHHH--------HHHHHHHHhcC-CC-eEEEEEeccCCCCC----CCChHHHHHHHH
Q 009475 294 SQNGNEHSATRDGFQEWGDSNVADTVA--------VIDFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYK 359 (534)
Q Consensus 294 ~qng~~~sg~~~g~~~W~~~~~~~~~~--------~w~~lA~ryk~-~~-~vlg~eL~NEP~~~----~~~~~~~~~~~~ 359 (534)
. ......+++ -|..+-.+++. .| .|--|||.|||... ..+.+.+.+.|.
T Consensus 141 -------------~----~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~vkyweiGNE~~g~w~~g~~t~~~Y~~~~~ 203 (513)
T 2c7f_A 141 -------------G----ISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAE 203 (513)
T ss_dssp -------------C----HHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESCCCCCTTSTTCCCHHHHHHHHH
T ss_pred -------------C----HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEeccCcccccccCCCCHHHHHHHHH
Confidence 0 122222232 35556666754 23 46779999999853 236788999999
Q ss_pred HHHHHHHhcCCceEEEEeCCCCC-----CCh-hhhhcccCCCceEEEEEeeccc
Q 009475 360 AGYDAVRKYTSTAYVIMSNRLGP-----ADH-KELLSFASGLSRVVIDVHYYNL 407 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv~~~~~~-----~~~-~~~~~~~~~~~nvv~d~H~Y~~ 407 (534)
+..++||+++|+..|+..+.... ..| ..++.. ....=-.+++|+|..
T Consensus 204 ~~a~a~k~~dP~i~via~G~~~~~~~~~~~W~~~~l~~-~~~~vD~is~H~Y~~ 256 (513)
T 2c7f_A 204 ETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDY-AYDYVDYISLHQYYG 256 (513)
T ss_dssp HHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHH-HTTTCCEEEEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEeCCCCCCCcccCchHHHHHHh-cccCCCEEEEeecCC
Confidence 99999999999977665432111 111 122222 123446789999953
|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0009 Score=73.24 Aligned_cols=160 Identities=16% Similarity=0.239 Sum_probs=97.6
Q ss_pred CHHHHHHHHhCCccEEEeCcc-------cccccCCCCCCC------C--CCchHHHHHHHHHHHHHCCCEEEEEcCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPVG-------WWIANDPTPPKP------F--VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 293 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~-------~w~~~~~~~~~~------~--~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG 293 (534)
.++-++.++++|+..||+|=+ |.....|....| + .+...--+|+++++|++.|+.+++-+-.-++
T Consensus 93 R~Dv~~alk~L~~~~lR~PGG~f~d~Y~W~d~iGP~e~Rp~~~~~~W~~~e~n~fG~dEf~~~~~~~GaeP~i~vn~G~~ 172 (574)
T 2y2w_A 93 RQDVLDLVKELGVTCVRYPGGNFVSNYNWEDGIGPRENRPMRRDLAWHCTETNEMGIDDFYRWSQKAGTEIMLAVNMGTR 172 (574)
T ss_dssp BHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEEECCSSC
T ss_pred HHHHHHHHHHhCCCEEeeCCCcccCcceecCCcCChhhCCCccccCccccccCCcCHHHHHHHHHHcCCEEEEEEeCCCC
Confidence 367788899999999999932 211112211011 1 0111112799999999999999999865321
Q ss_pred CCCCCCCCCCCCCCCCCChhhHHHHHH--------HHHHHHHHhcC-CC-eEEEEEeccCCCCC----CCChHHHHHHHH
Q 009475 294 SQNGNEHSATRDGFQEWGDSNVADTVA--------VIDFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYK 359 (534)
Q Consensus 294 ~qng~~~sg~~~g~~~W~~~~~~~~~~--------~w~~lA~ryk~-~~-~vlg~eL~NEP~~~----~~~~~~~~~~~~ 359 (534)
. ......+++ -|..+-.+++. .| .|--|||-|||... ..+.+.+.+.|+
T Consensus 173 ~-----------------~~ea~dwveY~n~~~~t~w~~lR~~~G~~ep~~vkyweIGNE~~g~W~~G~~t~e~Y~~~~~ 235 (574)
T 2y2w_A 173 G-----------------LKAALDELEYVNGAPGTAWADQRVANGIEEPMDIKMWCIGNEMDGPWQVGHMSPEEYAGAVD 235 (574)
T ss_dssp C-----------------HHHHHHHHHHHHCCTTSHHHHHHHHTTCCSCCCCCEEEESSCTTSTTSTTCCCHHHHHHHHH
T ss_pred C-----------------HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCcceeEEEeccccccccccCCCCHHHHHHHHH
Confidence 0 122222222 34455556653 34 57789999999753 245788999999
Q ss_pred HHHHHHHhcCCceEEEEeCCCCC-----CCh-hhhhcccCCCceEEEEEeecc
Q 009475 360 AGYDAVRKYTSTAYVIMSNRLGP-----ADH-KELLSFASGLSRVVIDVHYYN 406 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv~~~~~~-----~~~-~~~~~~~~~~~nvv~d~H~Y~ 406 (534)
+.+++||+++|+..|+..+.... ..| ..++... ...=-.+|+|+|.
T Consensus 236 ~~a~AiK~vdP~i~via~G~~~~~~p~~~~W~~~~l~~~-~~~vD~vs~H~Y~ 287 (574)
T 2y2w_A 236 KVAHAMKLAESGLELVACGSSGAYMPTFGTWEKTVLTKA-YENLDFVSCHAYY 287 (574)
T ss_dssp HHHHHHHHHCTTCEEEEECCSCTTSTTTTHHHHHHHHHH-GGGCCEEEEEEEE
T ss_pred HHHHHHHHhCCCeEEEEecCCcccCccccchHHHHHHhc-ccCCCEEEEeecC
Confidence 99999999999977776532211 011 1222221 1233478999994
|
| >3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0019 Score=69.49 Aligned_cols=155 Identities=14% Similarity=0.233 Sum_probs=96.0
Q ss_pred HHHHHHHHhCCccEEEeCcc-------cccccCCCCCCC------C--C-CchHHHHHHHHHHHHHCCCEEEEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVG-------WWIANDPTPPKP------F--V-GGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~-------~w~~~~~~~~~~------~--~-~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG 293 (534)
.+-++.|++++.-.||.|=+ |.....|....| + . ...+ -+++.+++|++.|..+++-+-.-.
T Consensus 71 ~dv~~alk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~~n~f-G~~Ef~~~~e~~gaep~~~vN~G~- 148 (504)
T 3ug3_A 71 KDVLEAVKRIKVPNLRWPGGNFVSNYHWEDGIGPKDQRPVRFDLAWQQEETNRF-GTDEFIEYCREIGAEPYISINMGT- 148 (504)
T ss_dssp HHHHHHHHHTTCSEEEESCSGGGGGCCGGGGCSSGGGSCCEEETTTTEEECCCS-CHHHHHHHHHHHTCEEEEECCCSS-
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcchhccCcCChHHCCCCcccCcccccCCCC-CHHHHHHHHHHhCCeEEEEEECCC-
Confidence 67788899999999999933 322222211011 1 0 1122 279999999999999999875421
Q ss_pred CCCCCCCCCCCCCCCCCChhhHHHHHHHHHH-----------HHHHhcC-CC-eEEEEEeccCCCCC----CCChHHHHH
Q 009475 294 SQNGNEHSATRDGFQEWGDSNVADTVAVIDF-----------LAARYAN-RP-SLAAIELINEPLAP----GVALDTLKS 356 (534)
Q Consensus 294 ~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~-----------lA~ryk~-~~-~vlg~eL~NEP~~~----~~~~~~~~~ 356 (534)
| ..+.+.+.++. +-...+. .| .|--|||-|||... ..+.+.+.+
T Consensus 149 --------g-----------~~~ea~d~veY~n~~~~t~~~~lRa~~G~~~P~~vkyweiGNE~~G~~q~G~~t~e~Y~~ 209 (504)
T 3ug3_A 149 --------G-----------TLDEALHWLEYCNGKGNTYYAQLRRKYGHPEPYNVKFWGIGNEMYGEWQVGHMTADEYAR 209 (504)
T ss_dssp --------C-----------CHHHHHHHHHHHHCCSSCHHHHHHHHTTCCSCCCCCEEEECSSTTSTTSTTCCCHHHHHH
T ss_pred --------C-----------CHHHHHHHHHHhcCCCCChHHHHHHHcCCCCCCCccEEEecCcccccccccCCCHHHHHH
Confidence 1 12333333333 3222222 23 57779999999753 245788999
Q ss_pred HHHHHHHHHHhcCCceEEEEeCCCCCCChh-hhhcccCCCceEEEEEeeccc
Q 009475 357 YYKAGYDAVRKYTSTAYVIMSNRLGPADHK-ELLSFASGLSRVVIDVHYYNL 407 (534)
Q Consensus 357 ~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~-~~~~~~~~~~nvv~d~H~Y~~ 407 (534)
.+.+..++||+.+|+..|+.++... ..|. .++.. ....--.+|.|+|..
T Consensus 210 ~~~~~a~Aik~~dP~I~lia~G~~~-~~W~~~~l~~-~~~~vD~vs~H~Y~~ 259 (504)
T 3ug3_A 210 AAKEYTKWMKVFDPTIKAIAVGCDD-PIWNLRVLQE-AGDVIDFISYHFYTG 259 (504)
T ss_dssp HHHHHHHHHHHHCTTCEEEECCCSC-HHHHHHHHHH-HTTTCSEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCcEEEEECCCC-cchhHHHHHh-cccCCCEEEEeeCCC
Confidence 9999999999999997777653221 1121 22222 123445789999964
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.044 Score=59.01 Aligned_cols=138 Identities=12% Similarity=0.049 Sum_probs=85.3
Q ss_pred hCCccEEEeCcccccccC-------CC---------CCCCCCCchHHHHHHHHHHHHHCCC-EEEEEcCCCCCCC--CCC
Q 009475 238 SNGINAVRIPVGWWIAND-------PT---------PPKPFVGGSSKVLDNAFDWAEKYGV-KVIVDLHAAPGSQ--NGN 298 (534)
Q Consensus 238 ~~G~N~VRIPv~~w~~~~-------~~---------~~~~~~~~~l~~ld~~v~~a~~~Gl-~VIlDlH~~pG~q--ng~ 298 (534)
.+|++.+|+||+--.+.. +. +...|+-..-.....+++.|+++|. +++...-.+|+.. |+.
T Consensus 62 Glgls~~R~~iG~~d~s~~~ys~~~~~~~~~~~f~~~d~~~d~~~d~~~~~~lk~A~~~~~~~i~aspWSpP~wMk~ng~ 141 (507)
T 3clw_A 62 GMALTNWRVNIGAGSYENREAKEVDNSWNRTECFLSPDGKYDFTKQAGQQWFMKAARERGMNNFLFFTNSAPYFMTRSAS 141 (507)
T ss_dssp SCCCSCEEEECCCCTTTTTTSSCCSSSSSCCCCSBCTTSCBCTTSSHHHHHHHHHHHHTTCCCEEEECSSCCGGGSSSSS
T ss_pred CceeEEEEEeccCCCcccccccccCCcccccccccCCCCCcCcccchhHHHHHHHHHHcCCCeEEEeCCCCcHHhccCCC
Confidence 689999999997422110 00 0011211111113457788888887 6776777777643 221
Q ss_pred CCCCCCCCCCC-CChhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCC--CCC--------CCChHHHHHHHHHHHHHHH
Q 009475 299 EHSATRDGFQE-WGDSNVADTVAVIDFLAARYANRP-SLAAIELINEP--LAP--------GVALDTLKSYYKAGYDAVR 366 (534)
Q Consensus 299 ~~sg~~~g~~~-W~~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP--~~~--------~~~~~~~~~~~~~~~~aIR 366 (534)
.. +. .+... ..++..+.+.++..+.++.|+.+. .|.++.+.||| ... ..+++...+|.+.+..+++
T Consensus 142 ~~-~~-~g~~~~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~es~~~t~~~~a~fik~L~p~l~ 219 (507)
T 3clw_A 142 TV-ST-DQDCINLQNDKFDDFARFLVKSAQHFREQGFHVNYISPNNEPNGQWHANSFQEGSFATKADLYRMVEELDKAIS 219 (507)
T ss_dssp SS-CC-CSSSCSSCTTCHHHHHHHHHHHHHHHHHTTCCEEEEECCSCTTSCGGGCCSSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred cc-CC-CCccccCChHHHHHHHHHHHHHHHHHHHcCCceeEeeeecCCccccccCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence 11 10 01100 124667778888888888887553 58889999999 431 1356788899999999999
Q ss_pred hcCCceEEEEe
Q 009475 367 KYTSTAYVIMS 377 (534)
Q Consensus 367 ~~~p~~~Iiv~ 377 (534)
+.+.+..|++.
T Consensus 220 ~~g~~~kI~~~ 230 (507)
T 3clw_A 220 EAQIDTKILIP 230 (507)
T ss_dssp HHTCSCEEEEE
T ss_pred hcCCCceEEEe
Confidence 99987766665
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00066 Score=69.42 Aligned_cols=160 Identities=11% Similarity=0.172 Sum_probs=101.1
Q ss_pred HHHHHHHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEE---EEcCCCCCCCCCCCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSATRD 305 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VI---lDlH~~pG~qng~~~sg~~~ 305 (534)
...+.+-..-||.|.. .+-| ...+|.++ .| .++..|+++++|+++||.|. |-.|. |.+.+-..
T Consensus 31 ~~y~~~~~~~Fn~~t~eN~mKW-~~~ep~~G-~~---~f~~aD~~v~~a~~~gi~vrGHtLvWh~----q~P~W~~~--- 98 (335)
T 4f8x_A 31 AAYLKVLKQNFGEITPANAMKF-MYTETEQN-VF---NFTEGEQFLEVAERFGSKVRCHNLVWAS----QVSDFVTS--- 98 (335)
T ss_dssp HHHHHHHHHHCSEEEESSTTSG-GGTEEETT-EE---CCHHHHHHHHHHHHTTCEEEEEEEECSS----SCCHHHHT---
T ss_pred HHHHHHHHHhCCEEEECCccch-HHhCCCCC-cc---CcchhHHHHHHHHHCCCEEEEeeecccc----cCcHHHhc---
Confidence 3444444447899987 5655 34455443 33 46789999999999999984 22342 22111110
Q ss_pred CCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHhc-----CCce
Q 009475 306 GFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKY-----TSTA 372 (534)
Q Consensus 306 g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~-----~p~~ 372 (534)
..|. +...+.+.+.++.+++||++ .|.+||++|||...+.+ ...| ..|...+++..|+. +|+.
T Consensus 99 --~~~~~~~l~~~~~~~I~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~~~~dP~a 174 (335)
T 4f8x_A 99 --KTWTAKELTAVMKNHIFKTVQHFGR--RCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALAQIGANDV 174 (335)
T ss_dssp --SCCCHHHHHHHHHHHHHHHHHHHGG--GCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHHHTTCTTS
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEEecCccCCCCccccCchhhhcCHHHHHHHHHHHHHhccccCCCCc
Confidence 0133 35567788999999999998 47889999999864211 1112 26788999999999 9999
Q ss_pred EEEEeCC-CCCCCh--hhhhc-------ccCCCceEEEEEeecc
Q 009475 373 YVIMSNR-LGPADH--KELLS-------FASGLSRVVIDVHYYN 406 (534)
Q Consensus 373 ~Iiv~~~-~~~~~~--~~~~~-------~~~~~~nvv~d~H~Y~ 406 (534)
.+++.+. ...... ..+.. -..+-+.|-+..|...
T Consensus 175 ~L~~NDYn~e~~~~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~ 218 (335)
T 4f8x_A 175 KLYYNDYGIENPGTKSTAVLQLVSNLRKRGIRIDGVGLESHFIV 218 (335)
T ss_dssp EEEEEESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEET
T ss_pred EEEEecccccCCcHhHHHHHHHHHHHHHCCCCcceeeeeeeecC
Confidence 9998642 111111 11111 1134678999999864
|
| >2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0026 Score=68.50 Aligned_cols=159 Identities=13% Similarity=0.167 Sum_probs=94.2
Q ss_pred HHHHHHHHhCCccEEEeCcc-------cccccCCCCCCC------C---CC-chHHHHHHHHHHHHHCCCEEEEEcCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVG-------WWIANDPTPPKP------F---VG-GSSKVLDNAFDWAEKYGVKVIVDLHAAP 292 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~-------~w~~~~~~~~~~------~---~~-~~l~~ld~~v~~a~~~Gl~VIlDlH~~p 292 (534)
.+-++.|+++|+-.||.|=+ |.....|....| + .+ ..+- +|+.+++|++.|..+++-+....
T Consensus 54 ~dv~~~lk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~e~n~fG-~~Ef~~~~~~~gaep~~~vn~g~ 132 (496)
T 2vrq_A 54 NDVLEALKQMKIPVLRWPGGCFADEYHWKDGVGPREKRKRMVNTHWGGVIENNHFG-THEFMMLCELLGCEPYISGNVGS 132 (496)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGTCCGGGGCSCGGGCCCCEETTTTSEECCCCSC-HHHHHHHHHHHTCEEEEEECCSS
T ss_pred HHHHHHHHhcCCCeEEeCCCccccceeecCCcCChHHCCCccCCCCCcccccCccC-HHHHHHHHHHcCCeEEEEEECCC
Confidence 67788899999999999953 211122210011 1 01 1121 49999999999999999887421
Q ss_pred CCCCCCCCCCCCCCCCCCChhhHHHHHH--------HHHHHHHHhcC-CC-eEEEEEeccCCCCC--CCChHHHHHHHHH
Q 009475 293 GSQNGNEHSATRDGFQEWGDSNVADTVA--------VIDFLAARYAN-RP-SLAAIELINEPLAP--GVALDTLKSYYKA 360 (534)
Q Consensus 293 G~qng~~~sg~~~g~~~W~~~~~~~~~~--------~w~~lA~ryk~-~~-~vlg~eL~NEP~~~--~~~~~~~~~~~~~ 360 (534)
| . ......+++ -|..+-.+++. .| .|--|||-|||... ..+.+.+.+.+.+
T Consensus 133 ---------g----~----~~ea~d~veY~n~~~~t~w~~lRa~~G~~eP~~vkyweiGNE~~g~~g~~~~~~Y~~~~~~ 195 (496)
T 2vrq_A 133 ---------G----T----VQEMSEWVEYITFDGESPMANWRRENGREKPWRIKYWGVGNQNWGCGGNMRAEYYADLYRQ 195 (496)
T ss_dssp ---------C----C----HHHHHHHHHHHHCCSBSHHHHHHHHTTCCSCCCCCEEEECSCTTTTTTCCCHHHHHHHHHH
T ss_pred ---------C----c----HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEEcCcccccCCCCCHHHHHHHHHH
Confidence 1 0 111222222 34445455543 22 47779999999752 2456788889999
Q ss_pred HHHHHHhc-CCceEEEEeCCCC-CCCh-hhhhcccCCCceEEEEEeeccc
Q 009475 361 GYDAVRKY-TSTAYVIMSNRLG-PADH-KELLSFASGLSRVVIDVHYYNL 407 (534)
Q Consensus 361 ~~~aIR~~-~p~~~Iiv~~~~~-~~~~-~~~~~~~~~~~nvv~d~H~Y~~ 407 (534)
..++||++ +|+..+|.++... ..+| ..++... ...--.+|.|+|..
T Consensus 196 ~a~a~k~~~dp~i~~ia~G~~~~~~~W~~~~l~~~-~~~~D~vs~H~Y~~ 244 (496)
T 2vrq_A 196 FQTYLRNYGDNKLHKIACGANTADYHWTEVLMKQA-APFMHGLSLHYYTV 244 (496)
T ss_dssp HHHTCCCCTTCCCEEEEEEEETTCHHHHHHHHHHH-GGGCSEEEEEEEEC
T ss_pred HHHHHHhCCCCCeEEEEeCCCCCCcchHHHHHHhC-CCCCCEEEEeecCC
Confidence 99999999 7776665542211 1112 1222221 12234689999964
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0041 Score=61.72 Aligned_cols=164 Identities=15% Similarity=0.067 Sum_probs=98.6
Q ss_pred HHHHHHHHhCCccEEEe-CcccccccCCCC---------------CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWWIANDPTP---------------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w~~~~~~~---------------~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG 293 (534)
+.-|+...+.|+|+||| |.++-.+.+|.. ++...-.....|.++++.|++||++||+.-- +
T Consensus 40 D~afdEavERGYNTVRIcAmP~LLf~~p~~l~~l~pl~gQrrW~~pg~~evdgr~~L~elf~aAk~hd~~ViLSSW-Y-- 116 (393)
T 3gyc_A 40 DQVLDELSERGYNAIRIDAYPHLIAENPMKKWLLKEVWNQQDWGSPDMNEVQVQPNLNLFLSKCKERDIKVGLSSW-Y-- 116 (393)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHHHCTTCCEEECCSCSSSSSSCSSCEEECCTTHHHHHHHHHHHTTCEEEEECC-C--
T ss_pred HHHHHHHHHcCCCeEEeccccceeecCCcchhhccccccccccCCCCCceechHHHHHHHHHHHHHcCCEEEEehh-h--
Confidence 67789999999999999 233222222111 0011112567899999999999999999855 3
Q ss_pred CCCCCCCCCCCCCCCCCChhhHHHHHHHH----HHHHHHhcCCCeEEEEEeccCCCCCC----------------CChHH
Q 009475 294 SQNGNEHSATRDGFQEWGDSNVADTVAVI----DFLAARYANRPSLAAIELINEPLAPG----------------VALDT 353 (534)
Q Consensus 294 ~qng~~~sg~~~g~~~W~~~~~~~~~~~w----~~lA~ryk~~~~vlg~eL~NEP~~~~----------------~~~~~ 353 (534)
|+ +-+..... ....+...+.| ++|.++ +=...|+..||.||--... ...+.
T Consensus 117 -QQ--spseal~a-----~~R~e~lA~aw~~lLdfi~~~-GL~drIAyVELhNEv~~~~la~~~~~~~~~vg~~a~~~e~ 187 (393)
T 3gyc_A 117 -RL--DVDEVCLK-----LDTPEKLADCWLTILRSIEED-GLLDTILYVDLCNEWPGDSWAPFFAKTYPNVGWGNWYKEE 187 (393)
T ss_dssp -CC--BTTCGGGG-----CCSHHHHHHHHHHHHHHHHHT-TCGGGEEEEESSTTTTCTTTCHHHHTTCTTTCTTCTTSHH
T ss_pred -hc--CHHHHHhh-----hccHHHHHHHHHHHHHHHHHc-cchhceeeEeeeccccCcccccccCccccccccchhhhHh
Confidence 21 11111111 12223333444 444432 2235789999999954311 12358
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhcccCCCceEEEEEeecccC
Q 009475 354 LKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLF 408 (534)
Q Consensus 354 ~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~~~~~~nvv~d~H~Y~~f 408 (534)
++.|++++++++|+.-|+.+|..+-. -.+...+.++ +.+--..+++|..-.+
T Consensus 188 l~~~lee~v~~lR~~hP~lpvt~SyT--~~~~~~~~~~-d~sfldfle~h~wm~~ 239 (393)
T 3gyc_A 188 SLRWMKTSLEKMRQVYPDMPFLYSFD--HGDVKKYEEV-DCSFLDLYEHHIWMAQ 239 (393)
T ss_dssp HHHHHHHHHHHHHTTCTTSCEECCBC--CSCTTHHHHS-CCTTCSSEEBCCCGGG
T ss_pred hhHHHHHHHHHHHHhCCCCeeeeeec--cchhhhhhcc-CchHHhhhhhHHHhhc
Confidence 99999999999999999999887632 2233444433 2233345777776544
|
| >3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0077 Score=64.66 Aligned_cols=156 Identities=18% Similarity=0.204 Sum_probs=93.4
Q ss_pred HHHHHHHHhCCc-cEEEeCccc-----ccc-cCCCCCCC---CC---------Cc--hHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGI-NAVRIPVGW-----WIA-NDPTPPKP---FV---------GG--SSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~-N~VRIPv~~-----w~~-~~~~~~~~---~~---------~~--~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
++-++.+|+++. -.||+-=++ |.- ..|....| .. .. .-..+|++.++|++.|..+|+.+
T Consensus 60 ~~v~~l~k~L~~~~~lR~GG~~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~~~~~~~def~~f~~~~G~~~~~~l 139 (488)
T 3vny_A 60 TQLAGFLRTLGRQGVLRIGGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLDKTGWKLIYGL 139 (488)
T ss_dssp HHHHHHHHHHCSSCEEEEESGGGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEEECHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEeCccccceEEEcCCCCCcccCcccccCcchhhccccCceeCHHHHHHHHHHHHHhCCEEEEEE
Confidence 667788899999 999992111 211 11110011 01 11 23459999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC--------CCCChHHHHHHHHH
Q 009475 289 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--------PGVALDTLKSYYKA 360 (534)
Q Consensus 289 H~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~--------~~~~~~~~~~~~~~ 360 (534)
-... .+.+.+.+..+.....-+. ..|..|||-|||.. ...+++.+.+.+.+
T Consensus 140 N~g~--------------------~~~~~a~~~v~y~~~~~~~-~~l~~welGNEpd~~~~~G~~~~~~t~~~Y~~~~~~ 198 (488)
T 3vny_A 140 NLGK--------------------GTPENAADEAAYVMETIGA-DRLLAFQLGNEPDLFYRNGIRPASYDFAAYAGDWQR 198 (488)
T ss_dssp CTTT--------------------SCHHHHHHHHHHHHHHHCT-TTEEEEEESSCGGGHHHHSSSCTTCCHHHHHHHHHH
T ss_pred eCCC--------------------CCHHHHHHHHHHHhhcccC-CceeEEEecCcccccccCCccCCCCCHHHHHHHHHH
Confidence 7421 1123445555544442222 36888999999962 12467788888888
Q ss_pred HHHHHHhcCCceEEEEeCCCCCCCh-hhhhcccCCCceEEEEEeeccc
Q 009475 361 GYDAVRKYTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNL 407 (534)
Q Consensus 361 ~~~aIR~~~p~~~Iiv~~~~~~~~~-~~~~~~~~~~~nvv~d~H~Y~~ 407 (534)
..++||+.+|+..++-.+.-....+ ..++.- ....=-.++.|+|..
T Consensus 199 ~a~a~k~~~p~~~l~gp~~~~~~~w~~~~l~~-~~~~vd~vS~H~Y~~ 245 (488)
T 3vny_A 199 FFTAIRKRVPNAPFAGPDTAYNTKWLVPFADK-FKHDVKFISSHYYAE 245 (488)
T ss_dssp HHHHHHHHCTTCCEEEEEESSCGGGHHHHHHH-TGGGCSEEEEEEEEE
T ss_pred HHHHHHhhCCCCeEEeCCCCCCchhhHHHHHh-cCccCCEEEEeeCCC
Confidence 9999999999866543321111112 223321 122334688999953
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=97.00 E-value=0.015 Score=62.50 Aligned_cols=139 Identities=19% Similarity=0.186 Sum_probs=83.0
Q ss_pred HhCCccEEEeCcccc-------cccCCCCC----CCCCCchH--HHHHHHHHHHHHC---CCEEEEEcCCCCCCC--CCC
Q 009475 237 SSNGINAVRIPVGWW-------IANDPTPP----KPFVGGSS--KVLDNAFDWAEKY---GVKVIVDLHAAPGSQ--NGN 298 (534)
Q Consensus 237 a~~G~N~VRIPv~~w-------~~~~~~~~----~~~~~~~l--~~ld~~v~~a~~~---Gl~VIlDlH~~pG~q--ng~ 298 (534)
..+|++.+|+||+-- ...+ .++ ..|.-..- ...-.+++.|+++ +|+++...-.+|+.. |+.
T Consensus 112 ~Glglsi~R~~IG~~d~s~~~ysy~d-~~~D~~l~~f~~~~d~~~~~i~~lk~A~~~~~~~lki~aspWSpP~wMk~n~~ 190 (497)
T 2nt0_A 112 EGIGYNIIRVPMASCDFSIRTYTYAD-TPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGA 190 (497)
T ss_dssp TTTCCCEEEEEESCCSSSSSCCCSCC-STTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCS
T ss_pred CCCceEEEEEeecCCCCCCCCccccC-CCCCcccCCCCcCccchhhHHHHHHHHHhhCCCCcEEEEecCCCcHHHhcCCC
Confidence 458999999999731 1111 111 12321111 2344566777765 699999999988753 222
Q ss_pred CC-CCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCCC----------CChHHHHHHHH-HHHHHH
Q 009475 299 EH-SATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG----------VALDTLKSYYK-AGYDAV 365 (534)
Q Consensus 299 ~~-sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~~----------~~~~~~~~~~~-~~~~aI 365 (534)
.. .|...+.+ .+.+.+.+.++..+..+.|+++. .|-++.+.|||.... .+.+...+|.+ .+..++
T Consensus 191 ~~ggG~L~~~~--~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L 268 (497)
T 2nt0_A 191 VNGKGSLKGQP--GDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTL 268 (497)
T ss_dssp SSSSCBBSSCT--TSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHH
T ss_pred cCCCCccCCcc--chhHHHHHHHHHHHHHHHHHHcCCCeeEEeeccCCCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 21 12110000 02366777777777777776542 478899999997521 34677888888 577788
Q ss_pred HhcCC-ceEEEEeC
Q 009475 366 RKYTS-TAYVIMSN 378 (534)
Q Consensus 366 R~~~p-~~~Iiv~~ 378 (534)
++.+- +..|++.+
T Consensus 269 ~~~gl~~~kI~~~D 282 (497)
T 2nt0_A 269 ANSTHHNVRLLMLD 282 (497)
T ss_dssp HTSTTTTSEEEEEE
T ss_pred HhcCCCCceEEEec
Confidence 88763 55566643
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.048 Score=57.83 Aligned_cols=136 Identities=13% Similarity=0.093 Sum_probs=83.5
Q ss_pred hCCccEEEeCccccccc------CCCC----CCCCCC-chHHHHHHHHHHHHH--CCCEEEEEcCCCCCCC--CCCCCCC
Q 009475 238 SNGINAVRIPVGWWIAN------DPTP----PKPFVG-GSSKVLDNAFDWAEK--YGVKVIVDLHAAPGSQ--NGNEHSA 302 (534)
Q Consensus 238 ~~G~N~VRIPv~~w~~~------~~~~----~~~~~~-~~l~~ld~~v~~a~~--~Gl~VIlDlH~~pG~q--ng~~~sg 302 (534)
.+|++.+|+||+--.+. ++.+ ...|.- .....+-.+++.|++ .+|+++...-.+|+.. |+....|
T Consensus 80 Glglsi~R~~IG~~d~s~~~ysy~d~~~d~~l~~f~~~~d~~~~~~~lk~A~~~~~~l~i~aspWSpP~wMk~n~~~~~g 159 (447)
T 2wnw_A 80 EHNYTLARMPIQSCDFSLGNYAYVDSSADLQQGRLSFSRDEAHLIPLISGALRLNPHMKLMASPWSPPAFMKTNNDMNGG 159 (447)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSHHHHHTTCCCCHHHHHHTHHHHHHHHHHCTTCEEEEEESCCCGGGBTTSCSBSC
T ss_pred CCceEEEEEeecCCCCCCCcccccCCCCCCccccCCcccchhHHHHHHHHHHHhCCCcEEEEecCCCcHHhccCCCcCCC
Confidence 58999999999731111 1100 012221 122244557777777 5699999999998753 2221111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCCC------CChHHHHHHHH-HHHHHHHhcCC-ceE
Q 009475 303 TRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG------VALDTLKSYYK-AGYDAVRKYTS-TAY 373 (534)
Q Consensus 303 ~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~~------~~~~~~~~~~~-~~~~aIR~~~p-~~~ 373 (534)
| .. .++..+.+.++..+..+.|+++. .|-++.+.|||.... .+.+...+|.+ .+..++++.+- +..
T Consensus 160 ---g-~L-~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~k 234 (447)
T 2wnw_A 160 ---G-KL-RRECYADWADIIINYLLEYRRHGINVQALSVQNEPVAVKTWDSCLYSVEEETAFAVQYLRPRLARQGMDEME 234 (447)
T ss_dssp ---C-BB-CGGGHHHHHHHHHHHHHHHHHTTCCCCEEESCSSTTCCCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCE
T ss_pred ---C-cC-CHHHHHHHHHHHHHHHHHHHHcCCCeeEEeeeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCce
Confidence 1 01 14566667777777777776542 477889999998632 35678888887 67788898876 445
Q ss_pred EEEeC
Q 009475 374 VIMSN 378 (534)
Q Consensus 374 Iiv~~ 378 (534)
|++.+
T Consensus 235 I~~~D 239 (447)
T 2wnw_A 235 IYIWD 239 (447)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 55543
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.024 Score=58.81 Aligned_cols=147 Identities=18% Similarity=0.130 Sum_probs=85.6
Q ss_pred CCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCC--CCCCCCCCCCCCCCCChhhHH
Q 009475 239 NGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ--NGNEHSATRDGFQEWGDSNVA 316 (534)
Q Consensus 239 ~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~q--ng~~~sg~~~g~~~W~~~~~~ 316 (534)
+|++.+|+||+.-. ..|.. -..+++.|+++|++++...-.+|+.. |+....+ |. ..+++.+
T Consensus 45 ~g~s~~R~~ig~~~-------~~~~~-----~~~~~k~A~~~~~~i~aspWSpP~wMk~n~~~~~~---g~--L~~~~~~ 107 (383)
T 2y24_A 45 IGLSIMRVRIDPDS-------SKWNI-----QLPSARQAVSLGAKIMATPWSPPAYMKSNNSLING---GR--LLPANYS 107 (383)
T ss_dssp CCCCEEEEEECSSG-------GGGGG-----GHHHHHHHHHTTCEEEEEESCCCGGGBTTSSSBSC---CB--BCGGGHH
T ss_pred ccceEEEEecCCcc-------ccccc-----chHHHHHHHhcCCeEEEecCCCcHHHhCCCCCCCC---Cc--CCHHHHH
Confidence 89999999997410 12221 13456778889999999888888753 2211101 11 1246677
Q ss_pred HHHHHHHHHHHHhcCCC-eEEEEEeccCCCCCC------CChHHHHHHHHHHHHHHHhcCCceEEEEeCC--CCCCCh-h
Q 009475 317 DTVAVIDFLAARYANRP-SLAAIELINEPLAPG------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNR--LGPADH-K 386 (534)
Q Consensus 317 ~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~~------~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~--~~~~~~-~ 386 (534)
.+.++..+.++.|+++. .|-++.+.|||.... .+.+...+|.+.....+++ ..|++++. |. .++ .
T Consensus 108 ~yA~Yl~k~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~t~~~~~~fik~~~~~~~~----~kI~~~d~~~~d-~~~~~ 182 (383)
T 2y24_A 108 AYTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGSKFGS----LKVIVAESLGFN-PALTD 182 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGGGSTT----SEEEEEEETTCC-GGGTH
T ss_pred HHHHHHHHHHHHHHHcCCCeEEecccccCCCCCCCCccCcCHHHHHHHHHHhhhhhcC----CEEEeecccccc-hhcch
Confidence 77777777888887653 477899999998632 2356677777665443332 34555432 21 111 1
Q ss_pred hhhc-ccCCCceEEEEEeeccc
Q 009475 387 ELLS-FASGLSRVVIDVHYYNL 407 (534)
Q Consensus 387 ~~~~-~~~~~~nvv~d~H~Y~~ 407 (534)
..+. .....---.+.+|.|..
T Consensus 183 ~~l~d~~a~~~v~~i~~H~Y~~ 204 (383)
T 2y24_A 183 PVLKDSDASKYVSIIGGHLYGT 204 (383)
T ss_dssp HHHTCHHHHTTCCEEEEECTTS
T ss_pred hhccCHhHHhhccEEEEecCCC
Confidence 1111 10111224788999953
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0032 Score=68.56 Aligned_cols=142 Identities=13% Similarity=0.119 Sum_probs=85.1
Q ss_pred HHHHHHhCCccEEEeC--cccccccCCCCCC-CCC-CchHHHHHHHHHHHHHCCCEEE---EEcCCCCCCCCCCCCCC-C
Q 009475 232 DFKFLSSNGINAVRIP--VGWWIANDPTPPK-PFV-GGSSKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSA-T 303 (534)
Q Consensus 232 d~~~ia~~G~N~VRIP--v~~w~~~~~~~~~-~~~-~~~l~~ld~~v~~a~~~Gl~VI---lDlH~~pG~qng~~~sg-~ 303 (534)
....+-...||.|..- +-| ...+|.++. .+. .=.+...|++|++|+++||+|. |=.|. |...+-.. .
T Consensus 207 ~~~~~~~~~Fn~it~eN~mKw-~~~e~~~g~~~~~~~~~f~~aD~~v~~A~~ngi~vrGHtLvWhs----q~P~W~~~~~ 281 (540)
T 2w5f_A 207 SIKALILREFNSITCENEMKP-DATLVQSGSTNTNIRVSLNRAASILNFCAQNNIAVRGHTLVWHS----QTPQWFFKDN 281 (540)
T ss_dssp HHHHHHHHHCSEEEESSTTSH-HHHEEEEEEETTEEEECCTTTHHHHHHHHHTTCEEEEEEEECSS----SCCGGGGBTT
T ss_pred HHHHHHHHhCCeecccccccc-cccccCCCCccccceechhHHHHHHHHHHHCCCEEEEEEEEcCC----CCchHHhccC
Confidence 3444445589999862 222 222232221 000 0135678999999999999984 22453 21111110 0
Q ss_pred CCCCCCCC--hhhHHHHHHHHHHHHHHhcCC-C--eEEEEEeccCCCCCCC---------C-------hHHHH------H
Q 009475 304 RDGFQEWG--DSNVADTVAVIDFLAARYANR-P--SLAAIELINEPLAPGV---------A-------LDTLK------S 356 (534)
Q Consensus 304 ~~g~~~W~--~~~~~~~~~~w~~lA~ryk~~-~--~vlg~eL~NEP~~~~~---------~-------~~~~~------~ 356 (534)
.+....+. ....++..+.++.+++||+++ | .|.+||++|||..... . ...|. .
T Consensus 282 ~~~~g~~~~~~~l~~~l~~~I~~vv~ry~g~y~~~~i~~WDVvNE~~~~~~~~~~~~g~~r~~~~~~~~s~w~~~~G~~~ 361 (540)
T 2w5f_A 282 FQDNGNWVSQSVMDQRLESYIKNMFAEIQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGDNK 361 (540)
T ss_dssp SSTTSCBCCHHHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEEESCSCSCHHHHHHSTTCCCBSSBTTBBHHHHHHSSTT
T ss_pred cccccCcCCHHHHHHHHHHHHHHHHHHhcccCCCCcEEEEEEecCcccCCccccccccccccccccccCCHHHHhhCcHH
Confidence 00001111 233567778899999999974 4 3999999999986430 0 12343 6
Q ss_pred HHHHHHHHHHhcCCc-eEEEEeC
Q 009475 357 YYKAGYDAVRKYTST-AYVIMSN 378 (534)
Q Consensus 357 ~~~~~~~aIR~~~p~-~~Iiv~~ 378 (534)
|++.+++..|+.+|+ ..+++.+
T Consensus 362 ~i~~aF~~Ar~~dP~~a~L~~ND 384 (540)
T 2w5f_A 362 FIEKAFTYARKYAPANCKLYYND 384 (540)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHHHhCCccceEEEEe
Confidence 899999999999997 7777754
|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.01 Score=60.73 Aligned_cols=132 Identities=17% Similarity=0.192 Sum_probs=82.9
Q ss_pred HHhCCccEEEe--CcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEE---EEcCCCCCCCCCCCCCCCCCCCC--
Q 009475 236 LSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSATRDGFQ-- 308 (534)
Q Consensus 236 ia~~G~N~VRI--Pv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VI---lDlH~~pG~qng~~~sg~~~g~~-- 308 (534)
+-..-||.|-. .+- |...+|.++ .| .+...|+++++|+++||.|- |-.|. |...+-....++..
T Consensus 33 ~~~~~Fn~it~EN~mK-w~~~ep~~G-~~---~f~~aD~~v~~a~~ngi~vrGHtLvWh~----q~P~W~~~~~d~~g~~ 103 (341)
T 3ro8_A 33 LLKMHHDVVTAGNAMK-PDALQPTKG-NF---TFTAADAMIDKVLAEGMKMHGHVLVWHQ----QSPAWLNTKKDDNNNT 103 (341)
T ss_dssp HHHHHCSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSS----SCCGGGTEEECTTSCE
T ss_pred HHHHhCCEEEECcccc-hhHhcCCCC-cc---chHHHHHHHHHHHhCCCEEEeccccCcc----cCCHHHhccCcccccc
Confidence 33455888875 333 334455443 33 46789999999999999984 33343 22222111001100
Q ss_pred -CCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC----------ChHHHH-----HHHHHHHHHHHhc---
Q 009475 309 -EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLK-----SYYKAGYDAVRKY--- 368 (534)
Q Consensus 309 -~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~----------~~~~~~-----~~~~~~~~aIR~~--- 368 (534)
... +...++..+.++.+++||++. |..||++|||...+. ....|. .|...+++.-|+.
T Consensus 104 ~~~s~~~l~~~~~~hI~~vv~rYkg~--i~~WDVvNE~~~~~~~~p~~~~~~~r~s~w~~~lG~d~i~~AF~~Ar~a~~~ 181 (341)
T 3ro8_A 104 VPLGRDEALDNLRTHIQTVMKHFGNK--VISWDVVNEAMNDNPSNPADYKASLRQTPWYQAIGSDYVEQAFLAAREVLDE 181 (341)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHGGG--SSEEEEEECCBCSSCSCTTCTGGGBCCCHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCc--ceEEEEecccccCCCCccccccccccCChHHHhcCHHHHHHHHHHHHHhccc
Confidence 122 234567888999999999984 778999999986321 011232 5788899999998
Q ss_pred --CCceEEEEeC
Q 009475 369 --TSTAYVIMSN 378 (534)
Q Consensus 369 --~p~~~Iiv~~ 378 (534)
+|+..+++-+
T Consensus 182 ~pdp~akL~~ND 193 (341)
T 3ro8_A 182 NPSWNIKLYYND 193 (341)
T ss_dssp STTCCCEEEEEE
T ss_pred CCCCCcEEEEec
Confidence 6688888854
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=96.05 E-value=0.057 Score=56.72 Aligned_cols=148 Identities=16% Similarity=0.244 Sum_probs=79.3
Q ss_pred HHHHHHHhCCccEEEeC-cccccccCCCCCCC---CCC--chHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRIP-VGWWIANDPTPPKP---FVG--GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATR 304 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~w~~~~~~~~~~---~~~--~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~ 304 (534)
+-++.|+++|+++|-|. |. -.-........ .++ |..+.|+++|+.|+++||+||+|+-- +|++
T Consensus 40 ~~Ldyl~~LGv~~i~l~Pi~-~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~--------NH~s-- 108 (424)
T 2dh2_A 40 GRLDYLSSLKVKGLVLGPIH-KNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTP--------NYRG-- 108 (424)
T ss_dssp TTHHHHHHTTCSEEEECCCE-EECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCT--------TTTS--
T ss_pred HHHHHHHHcCCCEEEECCCC-CCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECC--------CcCC--
Confidence 35789999999999983 32 11000000000 111 57999999999999999999999842 2333
Q ss_pred CCCCCCC----hhhHHHHHHHHHHHHHHhcCCCeEEEEEecc-CCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCC
Q 009475 305 DGFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIELIN-EPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 379 (534)
Q Consensus 305 ~g~~~W~----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~N-EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~ 379 (534)
...|. +...+...++.+.-.+ + +-..+ -+|.++ -|. . ..+.++..+.+++..|+.+++++..
T Consensus 109 --~~~wF~~q~~~Vr~~~~~~~~~Wl~-~-gvDGf-RlD~v~~~~~-----~---~~~~~~~~~~~~~~~~~~~~i~~e~ 175 (424)
T 2dh2_A 109 --ENSWFSTQVDTVATKVKDALEFWLQ-A-GVDGF-QVRDIENLKD-----A---SSFLAEWQNITKGFSEDRLLIAGTN 175 (424)
T ss_dssp --SSTTCSSCHHHHHHHHHHHHHHHHH-H-TCCEE-EECCGGGSTT-----H---HHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred --CcccccccCHHHHHHHHHHHHHHHH-c-CCCEE-EEeccccCCc-----c---HHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 11243 2333344444444444 2 32222 234443 232 1 1344555556777778777777764
Q ss_pred CCCCChhhhhcccCCCceEEEEEee
Q 009475 380 LGPADHKELLSFASGLSRVVIDVHY 404 (534)
Q Consensus 380 ~~~~~~~~~~~~~~~~~nvv~d~H~ 404 (534)
+. +...+........+.++++|+
T Consensus 176 ~~--~~~~~~~~~~~~~~~~~~f~~ 198 (424)
T 2dh2_A 176 SS--DLQQILSLLESNKDLLLTSSY 198 (424)
T ss_dssp CC--CHHHHHHHTTTCTTCEEECST
T ss_pred cC--CHHHHHHHhccccccccchhh
Confidence 43 333333332222235666654
|
| >1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A | Back alignment and structure |
|---|
Probab=95.77 E-value=0.09 Score=51.76 Aligned_cols=108 Identities=16% Similarity=0.201 Sum_probs=81.4
Q ss_pred ceeEEeeeeceeEEEeecCCCceEEeccCCC----CCc--ceEEEEEec---CceEEEEee-CCcEEEeecCCCC-ceEE
Q 009475 66 TQVQFMSTKFQKYIAAESGGGTIVVANRTSA----SGW--ETFRLWRVN---ETFYNFRVN-NKQFIGLENQGQG-NGLV 134 (534)
Q Consensus 66 ~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~----~~w--etf~~~~~~---~~~~~~~~~-n~~~v~~~~~g~~-~~~~ 134 (534)
..|.+||..||||...=.+.+..|+|+++.. +.| -.|++.++. .++++|+.. .|+|++-...|+. -...
T Consensus 55 g~vhIR~~~n~kyW~R~~~~~~wIvA~~~ep~ed~d~~~ctlFkp~~v~~~~~~~~~f~~vq~g~~~~~~~~~~~~~g~~ 134 (303)
T 1jlx_A 55 GLVHIKSRYTNKYLVRWSPNHYWITASANEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNYTVGGSFVSYL 134 (303)
T ss_dssp TCEEEEETTTCCEEEESSTTCCBEEEEESSCCCCTTSTTCCCEEEEESSTTCSSEEEEEETTTTEECEEECCSTTCCSEE
T ss_pred CEEEEEecCCCceeeecCCCCceEEecCCCCCcccCcccccceEEEEeccCCCceEEEEEEecCceEEeeecCCceeeEE
Confidence 4799999999999999666777999997655 455 369999985 689999988 9999999876422 1255
Q ss_pred EeecCC---CCCceEEEEEeCC---CCc-eEEEEecCCceEEeccc
Q 009475 135 AVSNTA---GYSETFQIVRKDG---DSS-RVRLSASNGMFIQAISE 173 (534)
Q Consensus 135 a~~~~~---~~~EtF~ivr~~~---~~~-~v~i~~~nG~~Lq~~g~ 173 (534)
+-++++ +.-+-|+++.-.. =+. .|.+|..||+||.+...
T Consensus 135 ~~~~~~~~~~~~d~ftv~d~~~~~~LPk~~v~fKGdNgkYL~~~~~ 180 (303)
T 1jlx_A 135 FAESSQIDTGSKDVFHVIDWKSIFQFPKGYVTFKGNNGKYLGVITI 180 (303)
T ss_dssp ECCCSSCCTTCTTCEEEEESGGGGCCCCSSEEEECTTSCEEEEEEE
T ss_pred EEcccccccccCCcEEEEchhhhhhCcceeEEEEcCCCcEEEEEEc
Confidence 555555 4445588666522 224 79999999999998753
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.12 Score=56.63 Aligned_cols=135 Identities=17% Similarity=0.257 Sum_probs=76.9
Q ss_pred HHHHHHHhCCccEEEe-Cccc----ccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCCCC-----
Q 009475 231 EDFKFLSSNGINAVRI-PVGW----WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ----- 295 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~----w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~q----- 295 (534)
+.++.|+++|+|+|=| ||.- | ..++..-...++ +..+.|+++|+.|+++||+||||+ |....+.
T Consensus 176 ~~LdyLk~LGvt~I~L~Pi~~~~~~~-GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~ 254 (583)
T 1ea9_C 176 DHLDHLSKLGVNAVYFTPLFKATTNH-KYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDV 254 (583)
T ss_dssp HTHHHHHHHTCSEEEECCCSSCSSSS-TTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHH
T ss_pred HhhHHHHHcCCCEEEECCCccCCCCC-CcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccccCCCccHHHHHH
Confidence 4589999999999998 4421 1 111111001111 468999999999999999999998 5443210
Q ss_pred --CC-------CCC-CC-------CCCCCCCC-----------C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 296 --NG-------NEH-SA-------TRDGFQEW-----------G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 296 --ng-------~~~-sg-------~~~g~~~W-----------~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+| +-+ .+ .......| . +..++..++..+..++.|+=+ . +-+|+.|+-
T Consensus 255 ~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gvD-G-fR~D~~~~~-- 330 (583)
T 1ea9_C 255 LKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGID-G-WRLDVANEV-- 330 (583)
T ss_dssp HTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCS-E-EEETTCTTS--
T ss_pred HhcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHhcCce-E-EEecccccC--
Confidence 00 000 00 00011111 1 334455556666666555332 2 235666653
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 347 PGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 347 ~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
+ ..+.+++.++|++..|+.+++-+
T Consensus 331 ---~----~~f~~~~~~~v~~~~p~~~~igE 354 (583)
T 1ea9_C 331 ---S----HQFWREFRRVVKQANPDAYILGE 354 (583)
T ss_dssp ---C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ---C----HHHHHHHHHHHHhhCCCeEEEEE
Confidence 2 35777778888998998766554
|
| >1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A | Back alignment and structure |
|---|
Probab=95.56 E-value=0.16 Score=50.08 Aligned_cols=143 Identities=13% Similarity=0.219 Sum_probs=95.1
Q ss_pred cCCcCCCCCcccccceeEEeeeeceeEEEeecCCCc---eEEeccCCC---CCcceEEEEEec------CceEEEEeeCC
Q 009475 52 SRFDDIPNKDLLDGTQVQFMSTKFQKYIAAESGGGT---IVVANRTSA---SGWETFRLWRVN------ETFYNFRVNNK 119 (534)
Q Consensus 52 ~~~~~~~~~~~~~g~~~~~~s~~~~~~~~a~~~g~~---~~~anr~~~---~~wetf~~~~~~------~~~~~~~~~n~ 119 (534)
.+|..++=.|= |..+|.|+|+..|+|++-..-|.. -+++ +.+. ..=+-|++.+-. .|-+.||..||
T Consensus 95 tlFkp~~v~~~-~~~~~~f~~vq~g~~~~~~~~~~~~~g~~~~-~~~~~~~~~~d~ftv~d~~~~~~LPk~~v~fKGdNg 172 (303)
T 1jlx_A 95 TLFKPLYVEEG-NMKKVRLLHVQLGHYTQNYTVGGSFVSYLFA-ESSQIDTGSKDVFHVIDWKSIFQFPKGYVTFKGNNG 172 (303)
T ss_dssp CCEEEEESSTT-CSSEEEEEETTTTEECEEECCSTTCCSEEEC-CCSSCCTTCTTCEEEEESGGGGCCCCSSEEEECTTS
T ss_pred cceEEEEeccC-CCceEEEEEEecCceEEeeecCCceeeEEEE-cccccccccCCcEEEEchhhhhhCcceeEEEEcCCC
Confidence 46766641110 357999999999999999887744 4444 2222 233447766654 45789999999
Q ss_pred cEEEeecCCCCceEEEeecCCCCC-ceEEEEEeCCCCceEEEEe-cCCceEEecccceeecCCCCCCCCCCCCCceeecc
Q 009475 120 QFIGLENQGQGNGLVAVSNTAGYS-ETFQIVRKDGDSSRVRLSA-SNGMFIQAISETRLTADYGSSSWDDSDPSVFKLNI 197 (534)
Q Consensus 120 ~~v~~~~~g~~~~~~a~~~~~~~~-EtF~ivr~~~~~~~v~i~~-~nG~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~ 197 (534)
+|+++-..++..-|.-..+.++.. ..+|++.+.|++ |+|+. .+|+|-..+..+=+.||...+.=.++....|+...
T Consensus 173 kYL~~~~~~~~~~LqF~~~d~~d~~~~~qv~~~~dG~--i~vks~~~~rFWR~s~~nWI~ad~~d~~~~~d~~~~F~pvr 250 (303)
T 1jlx_A 173 KYLGVITINQLPCLQFGYDNLNDPKVAHQMFVTSNGT--ICIKSNYMNKFWRLSTDDWILVDGNDPRETNEAAALFRSDV 250 (303)
T ss_dssp CEEEEEEETTEEEEEEEECCTTCGGGCEEEEECTTSC--EEEEETTTTEEEEECGGGBEEEEECCHHHHCCGGGCEEEEE
T ss_pred cEEEEEEcCCceeeEecCCCCCCCccceEEEEcCCce--EEEEecCCCchhhcCCCCeEEeCCCCCCCCCCCceeeEEEE
Confidence 999998654455677777777766 788999998876 88898 68999999844444444321101123346676644
Q ss_pred c
Q 009475 198 V 198 (534)
Q Consensus 198 ~ 198 (534)
+
T Consensus 251 v 251 (303)
T 1jlx_A 251 H 251 (303)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=95.23 E-value=0.021 Score=60.08 Aligned_cols=60 Identities=22% Similarity=0.531 Sum_probs=51.3
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG 293 (534)
+..++.||++|++-|.++| ||...++..+..| .+...+++++.+++.|||+ |+.+|...|
T Consensus 36 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~l~~mv~~~GLKlq~vmSFHqCGg 97 (495)
T 1wdp_A 36 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQY---DWRAYRSLLQLVQECGLTLQAIMSFHQCGG 97 (495)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 6889999999999999999 6777776655667 4888999999999999998 889997654
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.021 Score=59.99 Aligned_cols=60 Identities=25% Similarity=0.608 Sum_probs=51.0
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG 293 (534)
+..++.||++|++-|.++| ||...++..+..| .+...+++++.+++.|||+ |+.+|...|
T Consensus 37 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mv~~~GLKlq~vmSFHqCGg 98 (498)
T 1fa2_A 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQY---DWSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 7889999999999999999 6777776555566 4888999999999999998 889997654
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.32 Score=43.57 Aligned_cols=109 Identities=16% Similarity=0.302 Sum_probs=75.4
Q ss_pred cccceeEEeeeeceeEEEeecCC---CceEEeccCCCCCcceEEEEEecCceEEEEee-CCcEEEeecCC--CCceEEEe
Q 009475 63 LDGTQVQFMSTKFQKYIAAESGG---GTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQG--QGNGLVAV 136 (534)
Q Consensus 63 ~~g~~~~~~s~~~~~~~~a~~~g---~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~g--~~~~~~a~ 136 (534)
+.+...+|++...|+.|....++ |++|+.-.-.-+.-..|++...+++.|.|+.. .|+.+.+.+++ .|..|+-.
T Consensus 24 ~~~g~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~G~~v~~~ 103 (165)
T 3pg0_A 24 MGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQY 103 (165)
T ss_dssp --CCEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCSTTCBEEEE
T ss_pred CCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEECCCCCccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEE
Confidence 55678899999999999876532 44555433333456788888889999999987 68888875421 13346666
Q ss_pred ecCCCCCceEEEEEeCCCCceEEEEe-cCCceEEeccc
Q 009475 137 SNTAGYSETFQIVRKDGDSSRVRLSA-SNGMFIQAISE 173 (534)
Q Consensus 137 ~~~~~~~EtF~ivr~~~~~~~v~i~~-~nG~~Lq~~g~ 173 (534)
.-..+....|++...+++. ++|+. .+|+.|.+.+.
T Consensus 104 ~c~~~~~Q~W~~~~~g~g~--~~i~~~~sg~cLdv~~~ 139 (165)
T 3pg0_A 104 SYSGGDNQQWRLVDLGDGY--YKLVARHSGKALDVENA 139 (165)
T ss_dssp CCCCCGGGCEEEEECSSSC--EEEEETTTCCEEEEGGG
T ss_pred cCCCCCccEEEEEECCCCE--EEEEECCCCcEEEcCCC
Confidence 6666677889999887654 56665 46888888754
|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
Probab=95.08 E-value=0.025 Score=59.91 Aligned_cols=60 Identities=25% Similarity=0.573 Sum_probs=51.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG 293 (534)
+..++.||++|++-|.++| ||...++..+..| .+...+++++.+++.|||+ |+.+|...|
T Consensus 34 ~a~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mvr~~GLKlq~vmSFHqCGg 95 (535)
T 2xfr_A 34 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAY---DWSAYKQLFELVQKAGLKLQAIMSFHQCGG 95 (535)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 6889999999999999999 6777776555667 4888999999999999998 889997654
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=95.03 E-value=0.23 Score=54.27 Aligned_cols=134 Identities=13% Similarity=0.237 Sum_probs=75.3
Q ss_pred HHHHHHHhCCccEEEe-Cccc----ccccCCCC---CCCCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCCC----
Q 009475 231 EDFKFLSSNGINAVRI-PVGW----WIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ---- 295 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~----w~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~q---- 295 (534)
+.++.|+++|+|+|=| ||.- |- .++.. ..|- =+..+.|+++|+.|+++||+||||+ |....+.
T Consensus 180 ~~LdyLk~LGvt~I~L~Pi~~~~~~~G-Yd~~dy~~idp~-~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~ 257 (588)
T 1j0h_A 180 DHLDYLVDLGITGIYLTPIFRSPSNHK-YDTADYFEVDPH-FGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQD 257 (588)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSC-CSCSEEEEECTT-TCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCC-cCccccCccCcc-CCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccchhHHH
Confidence 4589999999999998 4421 10 11110 0111 1468999999999999999999998 5543210
Q ss_pred -------CC------CCCC-------CCC------CCCCC--CC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 296 -------NG------NEHS-------ATR------DGFQE--WG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 296 -------ng------~~~s-------g~~------~g~~~--W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+. .... +.. ...+. +. +..++..++..+...+.|.=+ . +-+|+.++-
T Consensus 258 ~~~~g~~s~y~dwy~~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~giD-G-fR~D~a~~~-- 333 (588)
T 1j0h_A 258 VWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDID-G-WRLDVANEI-- 333 (588)
T ss_dssp HHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCC-E-EEETTGGGS--
T ss_pred HHhcCCCCCcccccccccCCCCCCCCCCeEEecCCCCccccccCCHHHHHHHHHHHHHHHHhcCCc-E-EEEeccccC--
Confidence 00 0000 000 00001 11 334445555555555555332 2 235666653
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 347 PGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 347 ~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
+ ..+.+++.++|++..|+.+++-+
T Consensus 334 ---~----~~f~~~~~~~v~~~~p~~~~igE 357 (588)
T 1j0h_A 334 ---D----HEFWREFRQEVKALKPDVYILGE 357 (588)
T ss_dssp ---C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ---C----HHHHHHHHHHHHHhCCCeEEEEE
Confidence 2 35667778888888998766654
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.23 Score=52.18 Aligned_cols=137 Identities=15% Similarity=0.185 Sum_probs=73.8
Q ss_pred HHHHHHHhCCccEEEe-Cccccccc-----------CCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIAN-----------DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPG 293 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~-----------~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG 293 (534)
+.++.|+++|+++|=| |+. .... ++..-...++ +..+.|+++|+.|.++||+||+|+ |..++
T Consensus 34 ~~l~yl~~lG~~~i~l~Pi~-~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~NH~~~~ 112 (449)
T 3dhu_A 34 ADLQRIKDLGTDILWLLPIN-PIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYNHTSPD 112 (449)
T ss_dssp TTHHHHHHHTCSEEEECCCS-CBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEECTT
T ss_pred HhHHHHHHcCCCEEEECCcc-cccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccCcCcCc
Confidence 4578999999999998 442 1100 1100001111 568999999999999999999998 54432
Q ss_pred CC----CC-CCC---CCCC-CCCCCCC-----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHH
Q 009475 294 SQ----NG-NEH---SATR-DGFQEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYK 359 (534)
Q Consensus 294 ~q----ng-~~~---sg~~-~g~~~W~-----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~ 359 (534)
+. .. +-+ .+.. .....|. ........+.+..+++.+.+. |-||=+--=.+ .+ ..+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~--vDGfRlDaa~~---~~----~~f~~ 183 (449)
T 3dhu_A 113 SVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQF--VDGYRCDVAPL---VP----LDFWL 183 (449)
T ss_dssp SHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTT--CSEEEETTGGG---SC----HHHHH
T ss_pred cchhhcCccceEECCCCCcCCCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHh--CCEEEEEChhh---CC----HHHHH
Confidence 11 00 000 0100 0112343 111123333344444455554 55555421111 22 45667
Q ss_pred HHHHHHHhcCCceEEEEe
Q 009475 360 AGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv~ 377 (534)
++.+++++..|+..++-+
T Consensus 184 ~~~~~~~~~~p~~~~~gE 201 (449)
T 3dhu_A 184 EARKQVNAKYPETLWLAE 201 (449)
T ss_dssp HHHHHHHHHSTTCEEEEC
T ss_pred HHHHHHHhhCCCeEEEec
Confidence 778888888898766544
|
| >2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* | Back alignment and structure |
|---|
Probab=94.82 E-value=0.07 Score=57.69 Aligned_cols=107 Identities=21% Similarity=0.234 Sum_probs=68.2
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCCC---CCCCCCCCCCCCCCCCCC----------------hhhHHHHHHHHHHHHHHhc
Q 009475 270 LDNAFDWAEKYGVKVIVDLHAAPG---SQNGNEHSATRDGFQEWG----------------DSNVADTVAVIDFLAARYA 330 (534)
Q Consensus 270 ld~~v~~a~~~Gl~VIlDlH~~pG---~qng~~~sg~~~g~~~W~----------------~~~~~~~~~~w~~lA~ryk 330 (534)
+|+.++||++.|...+|.+.-... ..++.-..........|. +.......++++.+..+|.
T Consensus 92 ~~ef~~~~~~~g~e~m~~vnl~~~v~~~~~~~~~e~~~~~~~~w~e~~n~~~~~~~~~p~~~~g~~~~~~~~~~lr~~~G 171 (524)
T 2yih_A 92 VTSFHDQSLKLGTYSLVTLPMAGYVAADGNGSVQESEAAPSARWNQVVNAKNAPFQLQPDLNDNYVYVDEFVHFLVNKYG 171 (524)
T ss_dssp HHHHHHHHHHHTCEEEEEECCSSEEECCCCEECCGGGCSSSTTEEEEESCCCSCCCSSCCSSSSEEEHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCeEEEEEecCcccccccCcChhHhhcCcccchhhhhccccCcccccCCCCCcchhHHHHHHHHHHHcC
Confidence 899999999999999999874200 000000000000000011 0011123467888888986
Q ss_pred CC--C-eEEEEEeccCCCC----------CCCChHHHHHHHHHHHHHHHhcCCceEEEE
Q 009475 331 NR--P-SLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 331 ~~--~-~vlg~eL~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv 376 (534)
.. | .|-.|+|-|||.. ...+.+++.+.+.+..++||++||+..|+.
T Consensus 172 ~~~~p~gVk~W~LgNE~dgWq~gh~~~~p~~~t~~ey~~~~~e~AkamK~vDP~i~l~g 230 (524)
T 2yih_A 172 TASTKAGVKGYALDNEPALWSHTHPRIHPEKVGAKELVDRSVSLSKAVKAIDAGAEVFG 230 (524)
T ss_dssp CTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCeeEEEeccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEe
Confidence 54 2 4667899999964 123678999999999999999999977664
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=94.71 E-value=0.25 Score=53.99 Aligned_cols=56 Identities=23% Similarity=0.350 Sum_probs=39.2
Q ss_pred HHHHHHHhCCccEEEe-Cccc----ccccCCCC---CCCCCCchHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGW----WIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~----w~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+|+|=| ||.- |- .++.. ..|- =+..+.|+++|+.|+++||+||||+
T Consensus 177 ~~LdyLk~LGvt~I~L~Pi~~~~~~~G-Yd~~dy~~id~~-~Gt~~dfk~lv~~~H~~Gi~VilD~ 240 (585)
T 1wzl_A 177 DRLPYLEELGVTALYFTPIFASPSHHK-YDTADYLAIDPQ-FGDLPTFRRLVDEAHRRGIKIILDA 240 (585)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSC-CSCSEEEEECTT-TCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHhHHHHHcCCCEEEECCcccCCCCCC-cCcccccccCcc-cCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4589999999999998 4420 10 11110 0010 1468999999999999999999997
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=94.65 E-value=0.27 Score=53.90 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=40.3
Q ss_pred HHHHHHHHhCCccEEEe-Ccccc-------cccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWW-------IANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w-------~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+-++.|+++|+|+|-| ||.-- ...++......++ +..+.|+++|+.|+++||+||+|+
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 219 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDV 219 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 35688999999999998 44210 0011100000111 578999999999999999999998
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=93.94 E-value=0.21 Score=56.29 Aligned_cols=142 Identities=15% Similarity=0.266 Sum_probs=78.4
Q ss_pred HHHHHHHHhCCccEEEe-Ccc------cccccCCCC---CC-CCCCchHHHHHHHHHHHHHCCCEEEEEc---CCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI-PVG------WWIANDPTP---PK-PFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ 295 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~------~w~~~~~~~---~~-~~~~~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~q 295 (534)
++-+..|+++|+|+|=| ||. .|- .++.. +. .| +..+.|+++|+.|+++||+||||+ |......
T Consensus 205 ~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~G-Y~~~dy~a~~~~~--Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~ 281 (755)
T 3aml_A 205 DNVLPRIRANNYNTVQLMAIMEHSYYASFG-YHVTNFFAVSSRS--GTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVT 281 (755)
T ss_dssp HHTHHHHHHTTCCEEEEESCEECSCGGGTT-CSCSEEEEECGGG--CCHHHHHHHHHHHHHTTCEEEEEECCSCBCCCTT
T ss_pred HHHHHHHHHcCCCEEEECchhcCCCCCCCC-CccCCCCccCCCC--CCHHHHHHHHHHHHHCCCEEEEEEeccccccccc
Confidence 44589999999999998 332 121 11110 00 12 468999999999999999999998 5544321
Q ss_pred CC---CC----------CCCCCCC-CCCCC--------hhhHHHHHHHHHHHHHHhcCCCeEEEEEecc----CC-----
Q 009475 296 NG---NE----------HSATRDG-FQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELIN----EP----- 344 (534)
Q Consensus 296 ng---~~----------~sg~~~g-~~~W~--------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~N----EP----- 344 (534)
.+ ++ +.+. .+ ...|. +...+..++..+..++.|.=+. +-+|.+. ++
T Consensus 282 ~g~~~fd~~~~~~~~yf~~~~-~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e~gvDG--fR~Dav~~m~~~~~g~~~ 358 (755)
T 3aml_A 282 DGLNGYDVGQNTHESYFHTGD-RGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDG--FRFDGVTSMLYHHHGINK 358 (755)
T ss_dssp TSGGGGCSSCCGGGSSBCCGG-GGEETTTTEECBCTTSHHHHHHHHHHHHHHHHHHCCCE--EEETTHHHHHBTTTTTTC
T ss_pred cchhccccCCCCCcceeecCC-CCccCCCCCceeccCCHHHHHHHHHHHHHHHHHcCCCE--EEecchhhhhhcccCccc
Confidence 11 11 0000 01 11232 3344555566666666554221 1233332 11
Q ss_pred ---------CCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 345 ---------LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 345 ---------~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
.....+.+.+ .|.+.+.+++++..|+.++|-+.
T Consensus 359 ~f~~~~~~~~~~~~~~~ai-~fl~~~~~~v~~~~p~~~lIaE~ 400 (755)
T 3aml_A 359 GFTGNYKEYFSLDTDVDAI-VYMMLANHLMHKLLPEATIVAED 400 (755)
T ss_dssp CCCSCGGGTSSTTBCHHHH-HHHHHHHHHHHHHCTTCEEEECC
T ss_pred ccccccccccccccchhHH-HHHHHHHHHHHHHCCCeEEEEEc
Confidence 0001122233 67778888899999988776653
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=93.85 E-value=0.062 Score=56.61 Aligned_cols=58 Identities=22% Similarity=0.493 Sum_probs=41.1
Q ss_pred HHHHHHHHhCCccEEEeC-cc-----------cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRIP-VG-----------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIP-v~-----------~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
++-.+.|+++|+++|=|| +. ||...+|.. ...++ |..+.|+++|+.|+++||+||+|+
T Consensus 26 ~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~d-y~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 26 LECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVS-YKLCTRSGNEDEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSC-SCSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccC-ceeCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 334456999999999994 31 233333321 11122 578999999999999999999997
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=93.50 E-value=0.63 Score=51.18 Aligned_cols=145 Identities=16% Similarity=0.216 Sum_probs=77.8
Q ss_pred HHHHHHHHhCCccEEEe-Cccc------ccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRI-PVGW------WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNG 297 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~------w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qng 297 (534)
++-++.|+++|+|+|=| ||.- |- .++.......+ +..+.|+++|+.|+++||+||||+ |..+.. .+
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~G-Y~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~-~~ 236 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWG-YQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDD-FA 236 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTT-SSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCST-TS
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCC-cccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcccCcc-ch
Confidence 34459999999999998 5531 11 11110000011 468999999999999999999997 654321 11
Q ss_pred CCCC-C--------CCCC-CCCCC--------hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccC------CCCC------
Q 009475 298 NEHS-A--------TRDG-FQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELINE------PLAP------ 347 (534)
Q Consensus 298 ~~~s-g--------~~~g-~~~W~--------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NE------P~~~------ 347 (534)
+... + .+.+ .+.|. +..++..++..+...++|.=+. +-+|.+.. +...
T Consensus 237 ~~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gvDG--fR~D~~~~~~~~d~~~~~g~~~~~ 314 (617)
T 1m7x_A 237 LAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDA--LRVDAVASMIYRDYSRKEGEWIPN 314 (617)
T ss_dssp STTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCE--EEECCSHHHHCC------------
T ss_pred hhhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHhCcCE--EEEcchhhhhhccccccccccccc
Confidence 1000 0 0001 12232 3445556666666666664221 11332211 0000
Q ss_pred ---CCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 348 ---GVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 348 ---~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
......-..+.+++.++|++..|+.++|-+.
T Consensus 315 ~~~~~~~~~~~~fl~~~~~~v~~~~p~~~~iaE~ 348 (617)
T 1m7x_A 315 EFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEE 348 (617)
T ss_dssp --CTTCCHHHHHHHHHHHHHHHHSSTTCEEEECC
T ss_pred cccccCCchHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 0111234578889999999999987776653
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=93.41 E-value=0.085 Score=55.66 Aligned_cols=62 Identities=24% Similarity=0.481 Sum_probs=42.9
Q ss_pred HHHHHHHHhCCccEEEeC-cc-------cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 230 DEDFKFLSSNGINAVRIP-VG-------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIP-v~-------~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
++-++.|+++|+++|=|+ +. ||...++.. ...++ +..+.|+++|+.|+++||+||||+ |..+
T Consensus 18 ~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~-y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 18 QECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVS-YELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp HHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSC-SCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCcccccccc-cccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 444688999999999983 32 111222221 11222 579999999999999999999997 5544
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=93.40 E-value=0.78 Score=51.42 Aligned_cols=145 Identities=16% Similarity=0.167 Sum_probs=78.7
Q ss_pred HHHHHHHHhCCccEEEe-Cccccc-----ccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCCCC--C
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWWI-----ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ--N 296 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w~-----~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~q--n 296 (534)
++-+..|+++|+|+|-| |+.... ..++.......+ +..+.|+++|+.|.++||+||+|+ |..+... .
T Consensus 267 ~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~~~~~~~~ 346 (722)
T 3k1d_A 267 RELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVPAHFPKDAWALG 346 (722)
T ss_dssp HHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTCCCCCTTTTT
T ss_pred HHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEEEEEeeccCCccchhh
Confidence 44458999999999997 442110 011100000011 468999999999999999999997 5433211 0
Q ss_pred CCC------CCCCCC-CCCCCC--------hhhHHHHHHHHHHHHHHhcCCCeEEEEEecc--------------CCC--
Q 009475 297 GNE------HSATRD-GFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELIN--------------EPL-- 345 (534)
Q Consensus 297 g~~------~sg~~~-g~~~W~--------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~N--------------EP~-- 345 (534)
..+ +..... ..+.|. +...+..++......++|.=+. +-+|.+- .|.
T Consensus 347 ~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gvDG--fR~Dav~~mly~d~~r~~g~w~~n~~ 424 (722)
T 3k1d_A 347 RFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDG--LRVDAVASMLYLDYSRPEGGWTPNVH 424 (722)
T ss_dssp TTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCCCE--EEECCTHHHHBCCCCCCSSCCSCCCS
T ss_pred cCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhCCCE--EEEcchhhhhhccccccccccccccC
Confidence 000 000000 122343 3334455566666666653221 1133210 011
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 346 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
....+ ..-..+.+++.++|++..|+.++|-+
T Consensus 425 gg~~n-~~~~~fl~~l~~~v~~~~P~~~~iaE 455 (722)
T 3k1d_A 425 GGREN-LEAVQFLQEMNATAHKVAPGIVTIAE 455 (722)
T ss_dssp SCSBC-HHHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred CCccC-hHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 11112 23457889999999999999877766
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=93.20 E-value=0.87 Score=52.14 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHCCCEEEEEc---CCCCCC-----CCCCCCCCCCCCCC--CC--------ChhhHHHHHHHHHHHHHH
Q 009475 267 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS-----QNGNEHSATRDGFQ--EW--------GDSNVADTVAVIDFLAAR 328 (534)
Q Consensus 267 l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~-----qng~~~sg~~~g~~--~W--------~~~~~~~~~~~w~~lA~r 328 (534)
.+.|+++|+.|+++||+||||+ |..+++ ...+-+....+|.. .| .+...+..++..+..++.
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e 448 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSE 448 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999997 665531 01110000001110 01 134455666677777776
Q ss_pred hcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCC
Q 009475 329 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 381 (534)
Q Consensus 329 yk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~ 381 (534)
|.=+ -+-||++-. .+ ..+.+.++.++|+.+|+.+++ +..|.
T Consensus 449 ~gVD--GFRfD~a~~-----~~----~~~~~~~~~~~~~~~P~~~li-gE~Wd 489 (877)
T 3faw_A 449 FKVD--GFRFDMMGD-----HD----AAAIELAYKEAKAINPNMIMI-GEGWR 489 (877)
T ss_dssp HCCC--EEEETTGGG-----SB----HHHHHHHHHHHHHHCTTCEEE-ECCCS
T ss_pred cCCc--EEEEecCCc-----CC----HHHHHHHHHHHHhhCCCcEEE-Ecccc
Confidence 6432 123555421 22 345567788889999976555 44443
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=93.11 E-value=0.12 Score=55.34 Aligned_cols=53 Identities=25% Similarity=0.437 Sum_probs=38.8
Q ss_pred HHHHHHhCCccEEEe-CcccccccCCCCCCCC--------CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 232 DFKFLSSNGINAVRI-PVGWWIANDPTPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 232 d~~~ia~~G~N~VRI-Pv~~w~~~~~~~~~~~--------~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
-++.|+++|+|+|-| ||.- .|.....| ++ |..+.|+++|+.|+++||+||||+
T Consensus 37 kLdYLk~LGvt~I~L~Pi~~----~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 100 (549)
T 4aie_A 37 RLDYLEKLGIDAIWLSPVYQ----SPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDL 100 (549)
T ss_dssp THHHHHHHTCSEEEECCCEE----CCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHCCCCEEEeCCCcC----CCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 478999999999997 4421 11000011 11 578999999999999999999998
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=93.08 E-value=0.69 Score=51.82 Aligned_cols=135 Identities=13% Similarity=0.204 Sum_probs=75.1
Q ss_pred HHHHHHHhCCccEEEe-Cccc--------------ccccCCC----CCCCCC--C----chHHHHHHHHHHHHHCCCEEE
Q 009475 231 EDFKFLSSNGINAVRI-PVGW--------------WIANDPT----PPKPFV--G----GSSKVLDNAFDWAEKYGVKVI 285 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~--------------w~~~~~~----~~~~~~--~----~~l~~ld~~v~~a~~~Gl~VI 285 (534)
+-++.|+++|+|+|=| ||.- |. .++. +...|. + +..+.|+++|+.|+++||+||
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wG-Yd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VI 333 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWG-YNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVI 333 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCC-CSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCC-CCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEE
Confidence 3689999999999998 5531 10 0100 000111 1 137999999999999999999
Q ss_pred EEc---CCCCCCC-------CCC----CCCCCCCCCCCC------C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCC
Q 009475 286 VDL---HAAPGSQ-------NGN----EHSATRDGFQEW------G-DSNVADTVAVIDFLAARYANRPSLAAIELINEP 344 (534)
Q Consensus 286 lDl---H~~pG~q-------ng~----~~sg~~~g~~~W------~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP 344 (534)
||+ |..+... ..+ +..|.......| . +..++..++..+..+++|.=+ .+ -+|++..-
T Consensus 334 lDvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~~Wl~e~gVD-Gf-R~D~~~~~ 411 (718)
T 2e8y_A 334 LDVVFNHVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEEYNVD-GF-RFDLLGIL 411 (718)
T ss_dssp EEECTTCCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCC-EE-EETTGGGS
T ss_pred EEEecccccCcccccccccCCCeEEecCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHhCCC-EE-EEeccccC
Confidence 998 6554321 000 000111001112 1 344555666666666665432 22 35666432
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 345 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
+. .+.+++.+++++.+|+.+++-+
T Consensus 412 -----~~----~~~~~~~~~~~~~~p~~~ligE 435 (718)
T 2e8y_A 412 -----DI----DTVLYMKEKATKAKPGILLFGE 435 (718)
T ss_dssp -----BH----HHHHHHHHHHHHHSTTCEEEEC
T ss_pred -----CH----HHHHHHHHHHHHhCCCeEEEEe
Confidence 22 3456667778888888665544
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=92.62 E-value=0.22 Score=53.62 Aligned_cols=63 Identities=24% Similarity=0.267 Sum_probs=43.0
Q ss_pred HHHHHHHHhCCccEEEe-CcccccccC-----CCC------CCCCC--C--chHHHHHHHHHHHHHCCCEEEEEc---CC
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWWIAND-----PTP------PKPFV--G--GSSKVLDNAFDWAEKYGVKVIVDL---HA 290 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w~~~~-----~~~------~~~~~--~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~ 290 (534)
.+-++.|+++|+++|=| |+. ..... +.+ ....+ + +..+.|+++|+.|+++||+||+|+ |.
T Consensus 40 ~~~LdyLk~LGvt~IwL~Pi~-e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt 118 (527)
T 1gcy_A 40 RQQAATIAADGFSAIWMPVPW-RDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHM 118 (527)
T ss_dssp HHHHHHHHHTTCSEEEECCCS-CCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHhcCCCEEEeCCcc-ccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEeecCc
Confidence 34688999999999998 443 00000 000 00112 2 569999999999999999999998 65
Q ss_pred CCC
Q 009475 291 APG 293 (534)
Q Consensus 291 ~pG 293 (534)
.+.
T Consensus 119 ~~~ 121 (527)
T 1gcy_A 119 NRG 121 (527)
T ss_dssp CTT
T ss_pred CCC
Confidence 544
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=92.29 E-value=0.15 Score=53.54 Aligned_cols=62 Identities=26% Similarity=0.342 Sum_probs=41.6
Q ss_pred HHHHHHHhCCccEEEe-Ccccc---cccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVGWW---IANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w---~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
+.++.|+++|+++|-| ||.-. ...++......++ +..+.|+++|+.|+++||+||+|+ |..+
T Consensus 27 ~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 97 (441)
T 1lwj_A 27 NAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTGF 97 (441)
T ss_dssp HTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTBCCT
T ss_pred HhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcccC
Confidence 4588999999999998 34210 0011100000011 578999999999999999999998 5543
|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=92.15 E-value=0.24 Score=51.39 Aligned_cols=58 Identities=17% Similarity=0.243 Sum_probs=40.2
Q ss_pred HHHHHHHhCCccEEEe-Cccccc---ccCCCCCCCCC-C--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWI---ANDPTPPKPFV-G--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~---~~~~~~~~~~~-~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=| |+.-.. ..++......+ + +..+.|+++|+.|+++||+||+|+
T Consensus 25 ~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~ 89 (405)
T 1ht6_A 25 GKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADI 89 (405)
T ss_dssp TTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3578999999999998 342110 11111111112 2 578999999999999999999997
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=91.99 E-value=0.12 Score=54.94 Aligned_cols=64 Identities=25% Similarity=0.460 Sum_probs=43.8
Q ss_pred CHHHHHHHHhCCccEEEeC-cc---------cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIP-VG---------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPG 293 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIP-v~---------~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG 293 (534)
+++-++.|+++|+++|=|+ +. ||...++.. ...++ +..+.|+++|+.|+++||+||+|+ |..+.
T Consensus 25 ~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~d-y~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (471)
T 1jae_A 25 ADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVS-YIINTRSGDESAFTDMTRRCNDAGVRIYVDAVINHMTGM 103 (471)
T ss_dssp HHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCC-SCSEETTEEHHHHHHHHHHHHHTTCEEEEEECCSBCCSS
T ss_pred HHHHHHHHHHcCCCEEEeCccccccCCCCCCccccccccc-ccccCCCCCHHHHHHHHHHHHHCCCEEEEEEecccccCC
Confidence 3444688999999999984 31 111112211 11122 579999999999999999999998 66554
|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
Probab=91.89 E-value=0.24 Score=51.69 Aligned_cols=110 Identities=16% Similarity=0.095 Sum_probs=67.2
Q ss_pred hCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCC--CCCCCCCCCCCCCCChhhH
Q 009475 238 SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN--GNEHSATRDGFQEWGDSNV 315 (534)
Q Consensus 238 ~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qn--g~~~sg~~~g~~~W~~~~~ 315 (534)
.+|++.+|+||+.- + ..|. ....+++.|++.||+++...-.+|+... +.. .|...+. ...+++.
T Consensus 46 g~g~s~~R~~ig~~---~----~~~~-----~~~~~~k~A~~~~~~i~aspWspP~WMk~~~~~-~g~~~~g-~L~~~~y 111 (401)
T 3kl0_A 46 QLGFSILRIHVDEN---R----NNWY-----KEVETAKSAVKHGAIVFASPWNPPSDMVETFNR-NGDTSAK-RLKYNKY 111 (401)
T ss_dssp CCCCCEEEEEECSS---G----GGGG-----GGHHHHHHHHHTTCEEEEEESCCCGGGEEEEEE-TTEEEEE-EECGGGH
T ss_pred CCceEEEEEEeCCC---c----ccch-----hHHHHHHHHHhCCCEEEEecCCCCHHhccCCCc-CCCccCC-cCChHHH
Confidence 58999999999752 1 1221 1245677778899999999999997531 100 0100000 0114566
Q ss_pred HHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCCC----CChHHHHHHHHHH
Q 009475 316 ADTVAVIDFLAARYANRP-SLAAIELINEPLAPG----VALDTLKSYYKAG 361 (534)
Q Consensus 316 ~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~~----~~~~~~~~~~~~~ 361 (534)
+.+.++..+..+.|+++. .|.++.+.|||.... .+.++..++.++.
T Consensus 112 ~~yA~Y~~k~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~t~~~~~~fi~~~ 162 (401)
T 3kl0_A 112 AAYAQHLNDFVTFMKNNGVNLYAISVQNEPDYAHEWTWWTPQEILRFMREN 162 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEESCSCTTSCTTSCCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEeeecccCCCCCCCCCCHHHHHHHHHHh
Confidence 677777777777777653 577788999997531 2345555555443
|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
Probab=91.88 E-value=1.5 Score=50.64 Aligned_cols=134 Identities=13% Similarity=0.103 Sum_probs=75.3
Q ss_pred HHHHHHhCCccEEEe-CcccccccC------------C------C---CCCCCCCc-hHHHHHHHHHHHHHCCCEEEEEc
Q 009475 232 DFKFLSSNGINAVRI-PVGWWIAND------------P------T---PPKPFVGG-SSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 232 d~~~ia~~G~N~VRI-Pv~~w~~~~------------~------~---~~~~~~~~-~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
-++.|+++|+|+|=| ||.-....+ + . ...| .++ ..+.|+++|+.|+++||+||||+
T Consensus 474 ~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp-~Gt~~~~dfk~LV~~aH~~GI~VILDv 552 (921)
T 2wan_A 474 GIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTP-EGTARITELKQLIQSLHQQRIGVNMDV 552 (921)
T ss_dssp HHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCS-STTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCC-CCCccHHHHHHHHHHHHHcCCEEEEEE
Confidence 489999999999997 543111000 0 0 0012 111 27999999999999999999998
Q ss_pred ---CCCCCCC-------CCCCC----CCCCCCCCCC------C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC
Q 009475 289 ---HAAPGSQ-------NGNEH----SATRDGFQEW------G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 347 (534)
Q Consensus 289 ---H~~pG~q-------ng~~~----sg~~~g~~~W------~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~ 347 (534)
|..+... ....+ .|.......| . +..++..++..+..++.|.=+ . +-+|++..-
T Consensus 553 V~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~gVD-G-fR~Da~~~~--- 627 (921)
T 2wan_A 553 VYNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLDSVNYWVNEYHVD-G-FRFDLMALL--- 627 (921)
T ss_dssp CTTCCSCSSSSHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCC-E-EEETTGGGG---
T ss_pred ccccccccccccccCCCCCeEEEcCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHcCCC-E-EEecccccc---
Confidence 7655431 00000 0110000111 1 344555666666666655432 2 225555431
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 348 GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 348 ~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
+ ..+.+++.+++++.+|+.++|-+
T Consensus 628 --~----~~~~~~~~~~l~~~~p~~~ligE 651 (921)
T 2wan_A 628 --G----KDTMAKISNELHAINPGIVLYGE 651 (921)
T ss_dssp --C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --C----HHHHHHHHHHHHHhCCceEEEEe
Confidence 2 24566677788888998766554
|
| >2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=91.42 E-value=1.7 Score=50.53 Aligned_cols=100 Identities=17% Similarity=0.261 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHCCCEEEEEc---CCCCCC-----CCCCCCCCCCCCC--CCC-----C---hhhHHHHHHHHHHHHHH
Q 009475 267 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS-----QNGNEHSATRDGF--QEW-----G---DSNVADTVAVIDFLAAR 328 (534)
Q Consensus 267 l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~-----qng~~~sg~~~g~--~~W-----~---~~~~~~~~~~w~~lA~r 328 (534)
.+.|+++|+.|+++||+||||+ |..+++ ...+-+....++. ..| . +..++..++..+..++.
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~vr~~i~d~l~~W~~e 640 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT 640 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCSCHHHHHTTSTTTSBCBCTTCCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccccccccccCCCCeeEEeCCCCCcccCCCCCCcCcCCHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999997 654421 0000000000111 011 1 33445566666666666
Q ss_pred hcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 329 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 329 yk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
|.=+ . +-||++.+. +.+ +++++..++++.+|+.++|-+
T Consensus 641 ~gvD-G-fR~D~~~~~-----~~~----~~~~~~~~~~~~~p~~~ligE 678 (1014)
T 2ya1_A 641 YKVD-G-FRFDMMGDH-----DAA----SIEEAYKAARALNPNLIMLGE 678 (1014)
T ss_dssp HCCC-E-EEETTGGGS-----BHH----HHHHHHHHHHHHCTTCEEEEC
T ss_pred cCce-E-EEEeCCCCC-----CHH----HHHHHHHHHHHhCCCeEEEEe
Confidence 6433 2 225655421 223 445677788888998766544
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=91.23 E-value=0.19 Score=53.23 Aligned_cols=61 Identities=18% Similarity=0.303 Sum_probs=41.9
Q ss_pred HHHHHHHhCCccEEEe-CcccccccCC----CCCCCC--------CC--chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIANDP----TPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~~~----~~~~~~--------~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
+.++.|+++|+|+|=| |+.- ..... .....| ++ +..+.|+++|+.|+++||+||||+ |..+
T Consensus 47 ~~LdyL~~lGvt~I~l~Pi~~-~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (478)
T 2guy_A 47 DKLDYIQGMGFTAIWITPVTA-QLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVANHMGY 125 (478)
T ss_dssp HTHHHHHTTTCCEEEECCCEE-ECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCE
T ss_pred HHHHHHHhcCCCEEEeCCccc-CCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECcccCCC
Confidence 4578999999999998 4531 11000 000011 11 568999999999999999999998 5543
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=90.89 E-value=0.2 Score=53.31 Aligned_cols=61 Identities=18% Similarity=0.321 Sum_probs=41.9
Q ss_pred HHHHHHHhCCccEEEe-CcccccccCC----CCCCCCC--------C--chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIANDP----TPPKPFV--------G--GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~~~----~~~~~~~--------~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
+.++.|+++|+|+|=| |+.- ..... .....|. + +..+.|+++|+.|+++||+||+|+ |..+
T Consensus 47 ~~LdyL~~LGv~~I~l~Pi~~-~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 47 DHLDYIEGMGFTAIWISPITE-QLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp HTHHHHHTTTCCEEEECCCEE-ECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred HHHHHHHhcCCCEEEeCcccc-CcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 4579999999999998 4421 11000 0000111 1 468999999999999999999998 6554
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=90.73 E-value=0.51 Score=50.60 Aligned_cols=57 Identities=23% Similarity=0.170 Sum_probs=39.6
Q ss_pred HHHHHHHhCCccEEEeC-ccccccc------CCCCCC---C------CCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIP-VGWWIAN------DPTPPK---P------FVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~w~~~------~~~~~~---~------~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=|+ +. .... ++.... . .++ +..+.|+++|+.|+++||+||||+
T Consensus 28 ~~LdyLk~LGvt~IwL~Pi~-~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 102 (515)
T 1hvx_A 28 NEANNLSSLGITALWLPPAY-KGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (515)
T ss_dssp HHHHHHHHTTCCEEEECCCS-EESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhcCCCEEEeCCcc-cCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45799999999999984 31 1000 000000 0 112 579999999999999999999997
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=90.64 E-value=0.46 Score=50.44 Aligned_cols=57 Identities=28% Similarity=0.251 Sum_probs=39.6
Q ss_pred HHHHHHHhCCccEEEeC-ccccccc------CC---CCCCC------CCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIP-VGWWIAN------DP---TPPKP------FVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~w~~~------~~---~~~~~------~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=|+ |. .... ++ ..... .++ +..+.|+++|+.|+++||+||||+
T Consensus 29 ~~LdyL~~LGvt~IwL~Pi~-~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 103 (485)
T 1wpc_A 29 SDASNLKSKGITAVWIPPAW-KGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 103 (485)
T ss_dssp HHHHHHHHHTCCEEEECCCS-EESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcc-cCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999984 32 1000 00 00000 122 579999999999999999999997
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=90.58 E-value=0.18 Score=53.74 Aligned_cols=61 Identities=23% Similarity=0.340 Sum_probs=41.4
Q ss_pred HHHHHHHhCCccEEEeC-ccccccc----CCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 231 EDFKFLSSNGINAVRIP-VGWWIAN----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~w~~~----~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
+-++.|+++|+|+|=|. |. .... ++......++ +..+.|+++|+.|+++||+||+|+ |..+
T Consensus 60 ~~LdyL~~LGv~~I~L~Pi~-~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~ 130 (488)
T 2wc7_A 60 EDLDYIQNLGINAIYFTPIF-QSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSR 130 (488)
T ss_dssp HTHHHHHHHTCCEEEESCCE-EECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred HhhHHHHHcCCCEEEECCCC-CCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCCC
Confidence 46889999999999983 31 1000 0000000111 578999999999999999999998 6543
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=90.34 E-value=0.49 Score=50.19 Aligned_cols=57 Identities=28% Similarity=0.260 Sum_probs=39.6
Q ss_pred HHHHHHHhCCccEEEeC-ccccccc------CC---CCCC------CCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIP-VGWWIAN------DP---TPPK------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~w~~~------~~---~~~~------~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=|+ +. .... ++ .... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 25 ~~LdyL~~LGvt~I~L~Pi~-~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD~ 99 (483)
T 3bh4_A 25 NDAEHLSDIGITAVWIPPAY-KGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (483)
T ss_dssp HHHHHHHHHTCCEEEECCCS-EESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhcCCCEEEcCccc-cCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 46789999999999984 31 1000 00 0000 0122 579999999999999999999997
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=90.30 E-value=1.7 Score=46.76 Aligned_cols=108 Identities=14% Similarity=0.232 Sum_probs=77.2
Q ss_pred ccceeEEeeeeceeEEEeecCC---CceEEeccCCCCCcceEEEEEecCceEEEEee-CCcEEEeecCC--CCceEEEee
Q 009475 64 DGTQVQFMSTKFQKYIAAESGG---GTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQG--QGNGLVAVS 137 (534)
Q Consensus 64 ~g~~~~~~s~~~~~~~~a~~~g---~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~g--~~~~~~a~~ 137 (534)
+++..+|++...|+.|...+++ |+.|+.-.-.-+.-..|++...+++.|.|+.. .|+.+.+.+++ .|..|+--.
T Consensus 359 ~~~~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~ 438 (526)
T 3vsf_A 359 DTTRYKLVNKNSGKVLDVLDGSVDNAAQIVQWTDNGSLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKEDGGVLIQYT 438 (526)
T ss_dssp CCCCEEEEETTTCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCSTTEEEEEEC
T ss_pred CCccEEEEECCCCceEEecCCCCCCCcEEEEccCCCCcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEec
Confidence 5678999999999999876642 45555433334567788999999999999987 68888876431 233566655
Q ss_pred cCCCCCceEEEEEeCCCCceEEEEe-cCCceEEeccc
Q 009475 138 NTAGYSETFQIVRKDGDSSRVRLSA-SNGMFIQAISE 173 (534)
Q Consensus 138 ~~~~~~EtF~ivr~~~~~~~v~i~~-~nG~~Lq~~g~ 173 (534)
-..+....|++....++. ++|+. .+|+-|.+.+.
T Consensus 439 c~g~~nQ~W~~~~~g~g~--y~i~~~~sg~cLdv~~~ 473 (526)
T 3vsf_A 439 SNGGYNQHWKFTDIGDGY--YKISSRHCGKLIDVRKW 473 (526)
T ss_dssp CCCCGGGCEEEEEEETTE--EEEEESSSCCEEEEGGG
T ss_pred CCCCcccEEEEEECCCCe--EEEEECCCCCEEEeCCC
Confidence 566678889998887654 56665 46888888654
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=90.24 E-value=0.41 Score=52.82 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=39.7
Q ss_pred HHHHHHhCCccEEEe-Ccccc------cccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 232 DFKFLSSNGINAVRI-PVGWW------IANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 232 d~~~ia~~G~N~VRI-Pv~~w------~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.++.|+++|+|+|=| |+.-- ...++......++ +..+.|+++|+.|+++||+||+|+
T Consensus 118 ~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~ 183 (628)
T 1g5a_A 118 KIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (628)
T ss_dssp THHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 478999999999998 44210 0111111011112 579999999999999999999998
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=90.17 E-value=0.17 Score=55.52 Aligned_cols=138 Identities=14% Similarity=0.194 Sum_probs=72.4
Q ss_pred HHHHHHHhCCccEEEe-Cccccc-----ccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWI-----ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNE 299 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~-----~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qng~~ 299 (534)
+.++.|+++|+|+|=| ||.-.. ..++.......+ +..+.|+++|+.|+++||+||+|+ |..+.+.. ..
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~-~~ 226 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNY-LS 226 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCC-HH
T ss_pred HHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEecccccccCCcc-cc
Confidence 4578999999999997 552100 011100000011 568999999999999999999998 65432210 00
Q ss_pred CCCC----CCCCCCCC-------hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhc
Q 009475 300 HSAT----RDGFQEWG-------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKY 368 (534)
Q Consensus 300 ~sg~----~~g~~~W~-------~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~ 368 (534)
..+. ......|. +...+..++..+...+.|.= ..+ -+|.++.-.... + ..+.+++.++|++.
T Consensus 227 ~~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~gv-DGf-R~D~~~~i~~~~-~----~~fl~~~~~~v~~~ 299 (602)
T 2bhu_A 227 SYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHF-DGL-RLDATPYMTDDS-E----THILTELAQEIHEL 299 (602)
T ss_dssp HHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCC-SEE-EETTGGGCCCCS-S----SCHHHHHHHHHHTT
T ss_pred ccCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCC-CEE-EEechHhhhccc-h----HHHHHHHHHHHhhc
Confidence 0000 00012233 33444555555555555532 222 245544332110 1 13555666777777
Q ss_pred CCceEEEEe
Q 009475 369 TSTAYVIMS 377 (534)
Q Consensus 369 ~p~~~Iiv~ 377 (534)
++.++|-+
T Consensus 300 -~~~~li~E 307 (602)
T 2bhu_A 300 -GGTHLLLA 307 (602)
T ss_dssp -CSCCEEEE
T ss_pred -CCeEEEEE
Confidence 66665554
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=90.13 E-value=0.38 Score=53.20 Aligned_cols=58 Identities=16% Similarity=0.148 Sum_probs=40.1
Q ss_pred HHHHHHHhCCccEEEe-Cccccc------ccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWI------ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~------~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+|+|=| |+.-.. ..++......++ +..+.|+++|+.|+++||+||+|+
T Consensus 110 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~ 176 (644)
T 3czg_A 110 ERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADF 176 (644)
T ss_dssp HTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4578999999999998 442110 001111011122 579999999999999999999998
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=90.12 E-value=0.18 Score=53.31 Aligned_cols=61 Identities=25% Similarity=0.330 Sum_probs=41.4
Q ss_pred HHHHHHHhCCccEEEe-Cccccccc----CCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIAN----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~----~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
+.++.|+++|+|+|=| |+. .... ++......++ +..+.|+++|+.|+++||+||+|+ |...
T Consensus 54 ~~LdyL~~LGv~~I~l~Pi~-~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~ 124 (475)
T 2z1k_A 54 EKLPYLLDLGVEAIYLNPVF-ASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGR 124 (475)
T ss_dssp HTHHHHHHHTCCEEEECCCE-EESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHhHHHHHcCCCEEEECCCc-CCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 4588999999999998 341 1000 0000000011 468999999999999999999998 6553
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=90.09 E-value=0.51 Score=50.03 Aligned_cols=58 Identities=24% Similarity=0.188 Sum_probs=39.7
Q ss_pred HHHHHHHhCCccEEEeC-ccc------ccc--cCCCCCCC------CCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIP-VGW------WIA--NDPTPPKP------FVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~------w~~--~~~~~~~~------~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=|+ |.- |.. .+-..... .++ +..+.|+++|+.|+++||+||||+
T Consensus 27 ~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 101 (480)
T 1ud2_A 27 DDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDV 101 (480)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 46789999999999984 311 000 00000000 122 579999999999999999999997
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.99 E-value=0.29 Score=52.03 Aligned_cols=61 Identities=26% Similarity=0.459 Sum_probs=41.5
Q ss_pred HHHHHH--------HhCCccEEEe-Ccc----cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 231 EDFKFL--------SSNGINAVRI-PVG----WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 231 ~d~~~i--------a~~G~N~VRI-Pv~----~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
+-++.| +++|+++|-| ||. +| ..++......++ +..+.|+++|+.|+++||+||+|+ |..+
T Consensus 31 ~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~-GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~ 109 (488)
T 1wza_A 31 EKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYH-GYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPINHTSE 109 (488)
T ss_dssp HTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSS-CCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCCSBCCT
T ss_pred HhhhhhhccccchhhhcCccEEEECCcccCCCCC-CcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccccC
Confidence 458899 9999999998 342 11 011110000111 578999999999999999999998 6543
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=89.95 E-value=0.53 Score=52.59 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=39.5
Q ss_pred HHHHHHHhCCccEEEeCccccccc----C---------CCCCCCC------------CC--chHHHHHHHHHHHHHCCCE
Q 009475 231 EDFKFLSSNGINAVRIPVGWWIAN----D---------PTPPKPF------------VG--GSSKVLDNAFDWAEKYGVK 283 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~w~~~----~---------~~~~~~~------------~~--~~l~~ld~~v~~a~~~Gl~ 283 (534)
+.++.|+++|+|+|=|+=-+.... . ...+.|| ++ +..+.|+++|+.|+++||+
T Consensus 257 ~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~GI~ 336 (695)
T 3zss_A 257 RRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGLE 336 (695)
T ss_dssp GGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 358899999999999842111100 0 0011111 11 4689999999999999999
Q ss_pred EEEEc
Q 009475 284 VIVDL 288 (534)
Q Consensus 284 VIlDl 288 (534)
||+|+
T Consensus 337 VilD~ 341 (695)
T 3zss_A 337 IALDF 341 (695)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99997
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=89.94 E-value=0.24 Score=55.29 Aligned_cols=57 Identities=21% Similarity=0.313 Sum_probs=39.7
Q ss_pred HHHHHHHhCCccEEEeC-cccccccCCC-----CCCCC--------CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIP-VGWWIANDPT-----PPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~w~~~~~~-----~~~~~--------~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|-|+ +. .....+. ....| ++ +..+.|+++|+.|+++||+||+|+
T Consensus 56 ~kLdyLk~LGv~aIwL~Pi~-~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 128 (686)
T 1qho_A 56 QKLPYLKQLGVTTIWLSPVL-DNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (686)
T ss_dssp HTHHHHHHHTCCEEEECCCE-EECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHhcCCCEEEECccc-cCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45789999999999984 32 1110000 00011 11 579999999999999999999997
|
| >2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* | Back alignment and structure |
|---|
Probab=89.67 E-value=3.1 Score=48.75 Aligned_cols=100 Identities=11% Similarity=0.119 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHC-CCEEEEEc---CCCCCCC----CC-------CC-CCCCCCCCC----CC-----C-hhhHHHHHH
Q 009475 267 SKVLDNAFDWAEKY-GVKVIVDL---HAAPGSQ----NG-------NE-HSATRDGFQ----EW-----G-DSNVADTVA 320 (534)
Q Consensus 267 l~~ld~~v~~a~~~-Gl~VIlDl---H~~pG~q----ng-------~~-~sg~~~g~~----~W-----~-~~~~~~~~~ 320 (534)
.+.|+++|+.|+++ ||+||||+ |..+++. +. +- ......+.. .| . +...+..++
T Consensus 581 ~~efk~LV~~~H~~~GI~VILDvV~NHt~~~~~~~~~~~~d~~~p~yy~~~~p~~g~~~~~tg~~dln~~~p~Vr~~i~d 660 (1083)
T 2fhf_A 581 IKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESATCCSDSAPEHRMFAKLIAD 660 (1083)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHSTTTSBCBCTTTCCBCCTTSSEEBCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeccccCcCCCccchhccccCCCCCceeecCCCCCceecCCccCCcCcCCHHHHHHHHH
Confidence 78999999999998 99999998 6544321 00 00 000001111 11 1 333445556
Q ss_pred HHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 321 VIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 321 ~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
..+..+++|+=+ . +-||+++.. . ..+..+++++||+.+|+.++|-+
T Consensus 661 ~l~~W~~e~gVD-G-fR~D~a~~~-----~----~~~~~~~~~~l~~~~p~~~ligE 706 (1083)
T 2fhf_A 661 SLAVWTTDYKID-G-FRFDLMLYH-----P----KAQILSAWERIKALNPDIYFFGE 706 (1083)
T ss_dssp HHHHHHHHHCCC-E-EEETTGGGS-----B----HHHHHHHHHHHHTTCTTCEEEEC
T ss_pred HHHHHHHHhCCc-E-EEEeCcccC-----C----HHHHHHHHHHHHHhCCCeEEEEe
Confidence 666666666432 2 235666542 2 34566777888999998765544
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=89.59 E-value=0.22 Score=55.03 Aligned_cols=57 Identities=23% Similarity=0.327 Sum_probs=39.4
Q ss_pred HHHHHHHhCCccEEEe-Ccc----cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVG----WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~----~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|=| ||. +|- .++..-...++ +..+.|+++|+.|+++||+||||+
T Consensus 243 ~kLdYLk~LGvt~I~L~Pif~s~~~~G-Yd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~ 306 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPIFSSLTYHG-YDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDG 306 (645)
T ss_dssp HTHHHHHHHTCCEEEECCCEEESSTTC-SSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCC-cCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEe
Confidence 4578999999999998 552 110 00000000011 578999999999999999999998
|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
Probab=89.45 E-value=2 Score=47.44 Aligned_cols=124 Identities=15% Similarity=0.069 Sum_probs=70.7
Q ss_pred HhCCccEEEeCccccccc-CCCCCCCC---------CCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCC
Q 009475 237 SSNGINAVRIPVGWWIAN-DPTPPKPF---------VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDG 306 (534)
Q Consensus 237 a~~G~N~VRIPv~~w~~~-~~~~~~~~---------~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g 306 (534)
+.+|++.+|+||+--.+. +...+..+ ....+..++++.+. .-+|+++..--.+|+..... +
T Consensus 63 ~Gigls~~R~~IG~~dfs~~~~~~~~f~~~~d~~~~~~~~i~~lk~A~~~--~p~lki~aspWSpP~WMK~n---~---- 133 (656)
T 3zr5_A 63 FGASLHILKVEIGGDGQTTDGTEPSHMHYELDENYFRGYEWWLMKEAKKR--NPDIILMGLPWSFPGWLGKG---F---- 133 (656)
T ss_dssp TSSCCSEEEEEECCSSBCSSSBCCCSCSSTTCCCSCCSSHHHHHHHHHHH--CTTCEEEEEESCBCGGGGTT---S----
T ss_pred CCCeeEEEEEEecCCCccCCCCCCcCCccccccchhhchhHHHHHHHHHh--CCCcEEEEecCCCcHHhccC---C----
Confidence 368999999999742111 11111111 11234445544332 23589999999999753211 0
Q ss_pred CCCCChhhHHHHHHHHHHHHHHh-cCC-CeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCc-eEEEEeC
Q 009475 307 FQEWGDSNVADTVAVIDFLAARY-ANR-PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST-AYVIMSN 378 (534)
Q Consensus 307 ~~~W~~~~~~~~~~~w~~lA~ry-k~~-~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~Iiv~~ 378 (534)
.+.+++.+.+..++.+..+.| +.+ -.|.++.+.|||... .+|.+.+..++++.+.+ ..|++.+
T Consensus 134 --~l~~~~y~~yA~Ylvk~i~~y~~~~GI~i~~Is~qNEP~~~-------~~fik~L~p~L~~~gl~~~kI~~~D 199 (656)
T 3zr5_A 134 --SWPYVNLQLTAYYVVRWILGAKHYHDLDIDYIGIWNERPFD-------ANYIKELRKMLDYQGLQRVRIIASD 199 (656)
T ss_dssp --SCTTSSHHHHHHHHHHHHHHHHHHHCCCCCEECSCTTSCCC-------HHHHHHHHHHHHHTTCTTCEEEEEE
T ss_pred --CCChHHHHHHHHHHHHHHHHHHHhcCCceEEEeeccCCCcc-------ccHHHHHHHHHHHcCCCccEEEEcC
Confidence 022344555555555555553 332 257778999999852 24566778888888875 5566643
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=89.37 E-value=0.28 Score=54.72 Aligned_cols=58 Identities=21% Similarity=0.228 Sum_probs=40.2
Q ss_pred HHHHH--HHHhCCccEEEe-CcccccccCC--------CCCCCC--------CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFK--FLSSNGINAVRI-PVGWWIANDP--------TPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~--~ia~~G~N~VRI-Pv~~w~~~~~--------~~~~~~--------~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+.++ .|+++|+++|=| |+. .....+ .....| ++ +..+.|+++|+.|+++||+||||+
T Consensus 58 ~~kLd~~yLk~LGvt~IwL~Pi~-~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 136 (686)
T 1d3c_A 58 INKINDGYLTGMGVTAIWISQPV-ENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDF 136 (686)
T ss_dssp HHHHHTTTTGGGTCCEEEECCCE-EECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCHHHHHhcCCCEEEeCCcc-cCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35688 999999999998 442 110000 000011 11 569999999999999999999998
|
| >4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} | Back alignment and structure |
|---|
Probab=89.34 E-value=0.78 Score=49.70 Aligned_cols=91 Identities=18% Similarity=0.173 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhcCC-CeEEEEEeccCCCCC--C--C------ChHHHHHHHHHHHHHHHhcC---CceEEEEe-CCCCC
Q 009475 318 TVAVIDFLAARYANR-PSLAAIELINEPLAP--G--V------ALDTLKSYYKAGYDAVRKYT---STAYVIMS-NRLGP 382 (534)
Q Consensus 318 ~~~~w~~lA~ryk~~-~~vlg~eL~NEP~~~--~--~------~~~~~~~~~~~~~~aIR~~~---p~~~Iiv~-~~~~~ 382 (534)
..++-+.+|++|+.. +...-||++|||... . . +.+.+-+++..+.++||+.. |+..|.-. .+|..
T Consensus 120 ~~a~a~~~a~~~~~~e~~p~y~Ev~NEP~v~~~~~~~~~~~~~~~~~~~e~~~~vA~aIk~~~~~np~vkVGGpasA~p~ 199 (591)
T 4aw7_A 120 VQAAGAWSAEYYSNSELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVDFYASIGKHIHNNPRLNGKMKVIGYAAAYPA 199 (591)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEECSSSCGGGTTCTTCSSCHHHHHHHHHHHHHHHHHHHHTCTTTTTTCEEEEEEESCCC
T ss_pred HHHHHHHHHHHhccCCCCceeEEeccCCCcccccccccCCCchhHHHHHHHHHHHHHHHhccccCCCceeEecccccccc
Confidence 344556677777754 345569999999832 2 1 24578899999999999875 77655432 23422
Q ss_pred ---CChhhh----hccc--CCCceEEEEEeecccC
Q 009475 383 ---ADHKEL----LSFA--SGLSRVVIDVHYYNLF 408 (534)
Q Consensus 383 ---~~~~~~----~~~~--~~~~nvv~d~H~Y~~f 408 (534)
.++..| ..|. .+.+=-.+|+|.|.-.
T Consensus 200 ~e~~nF~~W~~~~k~Fmd~ag~~mDf~S~H~Yd~~ 234 (591)
T 4aw7_A 200 WEDGNFNYWNTRMKMFIDRAGAYMDGFSVHLYDGI 234 (591)
T ss_dssp TTTTTTHHHHHTHHHHHHHHGGGCSEEEEEEEEEC
T ss_pred ccccchhhhhHHHHHHHHhcCCCcCEEEEeecCCc
Confidence 122222 2222 3456678999999763
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=89.29 E-value=0.21 Score=52.17 Aligned_cols=62 Identities=27% Similarity=0.379 Sum_probs=41.4
Q ss_pred HHHHHHHhCCccEEEe-Ccccc--------------cccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CC
Q 009475 231 EDFKFLSSNGINAVRI-PVGWW--------------IANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HA 290 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w--------------~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~ 290 (534)
+.++.|+++|+++|=| |+.-. ...++......++ +..+.|+++|+.|+++||+||+|+ |.
T Consensus 21 ~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~VilD~V~NH~ 100 (422)
T 1ua7_A 21 HNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHT 100 (422)
T ss_dssp HTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEECCSBC
T ss_pred HHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCcc
Confidence 4578999999999998 43110 0011100000011 578999999999999999999998 65
Q ss_pred CC
Q 009475 291 AP 292 (534)
Q Consensus 291 ~p 292 (534)
.+
T Consensus 101 ~~ 102 (422)
T 1ua7_A 101 TF 102 (422)
T ss_dssp CS
T ss_pred cC
Confidence 44
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=89.25 E-value=0.48 Score=49.73 Aligned_cols=63 Identities=29% Similarity=0.380 Sum_probs=42.2
Q ss_pred HHHHHHHHhCCccEEEeC-cc------cccccCCCCCC---------CCCC--chHHHHHHHHHHHHHCCCEEEEEc---
Q 009475 230 DEDFKFLSSNGINAVRIP-VG------WWIANDPTPPK---------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL--- 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIP-v~------~w~~~~~~~~~---------~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl--- 288 (534)
.+.++.|+++|+++|=|+ +. ++...++.... ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 31 ~~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 31 RSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 345889999999999984 31 00011110000 0122 579999999999999999999997
Q ss_pred CCCC
Q 009475 289 HAAP 292 (534)
Q Consensus 289 H~~p 292 (534)
|..+
T Consensus 111 H~~~ 114 (435)
T 1mxg_A 111 HRAG 114 (435)
T ss_dssp BCCC
T ss_pred cccC
Confidence 6543
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A | Back alignment and structure |
|---|
Probab=89.16 E-value=2.3 Score=42.89 Aligned_cols=105 Identities=14% Similarity=0.148 Sum_probs=71.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++-++.|++.|++.||| | +++ ..++..++..||+|+|.+-... ....
T Consensus 18 ~~Vv~llks~gi~~VRl---Y----~~D-------------~~vL~Al~~sgi~V~lGV~n~~-----------l~~l-- 64 (323)
T 3ur8_A 18 QDVIKLYNANNIKKMRI---Y----YPH-------------TNVFNALKGSNIEIILDVPNQD-----------LEAL-- 64 (323)
T ss_dssp HHHHHHHHHTTCCEEEE---S----SCC-------------HHHHHHHTTCCCEEEEEECGGG-----------TGGG--
T ss_pred HHHHHHHHhCCCCeEEe---c----CCC-------------HHHHHHHHhcCCeEEEeccccc-----------hhhh--
Confidence 44566779999999999 1 221 4788888899999999986320 0000
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC---ChHHHHHHHHHHHHHHHhcCC
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTLKSYYKAGYDAVRKYTS 370 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p 370 (534)
.. .+...+..+.-...|.....|.++-+-||+..... ....+..+++.+.+++++.+=
T Consensus 65 --a~-~~~A~~WV~~nV~~y~~~~~I~~IaVGNEvl~~~~~~~~~~~Lvpam~nv~~aL~~aGl 125 (323)
T 3ur8_A 65 --AN-PSNANGWVQDNIRNHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNALSSAGL 125 (323)
T ss_dssp --GS-HHHHHHHHHHHTGGGTTTSEEEEEEEEESCCTTSGGGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred --hh-HHHHHHHHHHHHhhhCCCceEEEEEEccccccCCCcccCHHHHHHHHHHHHHHHHHCCC
Confidence 11 33333334444455666678888899999986432 267889999999999998774
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=89.10 E-value=0.64 Score=51.69 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=39.8
Q ss_pred HHHHHHHhCCccEEEeC-cccc---cccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIP-VGWW---IANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~w---~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+++|-|+ |.-. ...++......++ +..+.|+++|+.|+++||+||+|+
T Consensus 64 ~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~ 127 (669)
T 3k8k_A 64 QKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDY 127 (669)
T ss_dssp TTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 34889999999999984 3210 0011111111111 579999999999999999999997
|
| >4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A | Back alignment and structure |
|---|
Probab=89.05 E-value=0.32 Score=55.46 Aligned_cols=27 Identities=15% Similarity=0.290 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 266 SSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 266 ~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
.++.++++|+.|+++||+||||+ |...
T Consensus 377 ~~~efk~LV~~aH~~GIkVIlDvV~NHts~ 406 (884)
T 4aio_A 377 RIIEYRQMVQALNRIGLRVVMDVVYNHLDS 406 (884)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSBCSC
T ss_pred hHHHHHHHHHHHHhcCCceeeeeccccccC
Confidence 47789999999999999999998 6543
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=88.90 E-value=0.68 Score=50.25 Aligned_cols=62 Identities=29% Similarity=0.486 Sum_probs=42.5
Q ss_pred HHHHHHHhCCccEEEe-Cccc------ccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVGW------WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPG 293 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~------w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG 293 (534)
+.+..|+++|+++|-| |+.- |. .++.......+ +..+.|+++|+.|+++||+||+|+ |..+.
T Consensus 123 ~~l~~l~~lG~~~v~l~Pi~~~~~~~~~G-Y~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 196 (558)
T 3vgf_A 123 RKLDYLKDLGITAIEIMPIAQFPGKRDWG-YDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPE 196 (558)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCS-TTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCSS
T ss_pred HHHHHHHHcCCcEEEECCcccCCCCCCcC-cccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccCC
Confidence 4578999999999998 4421 10 11100000011 468999999999999999999998 76654
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=88.81 E-value=0.54 Score=50.91 Aligned_cols=57 Identities=28% Similarity=0.437 Sum_probs=39.8
Q ss_pred HHHHHHHhCCccEEEe-CcccccccCCCCCCC-----CCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~~~~~~~~-----~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+|+|=| ||.- .-.....-.+ .++ +..+.|+++|+.|+++||+||+|+
T Consensus 35 ~~ldyl~~lGv~~i~l~Pi~~-~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~ 99 (555)
T 2ze0_A 35 EKLDYLVELGVDIVWICPIYR-SPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDL 99 (555)
T ss_dssp HTHHHHHHHTCCEEEECCCEE-CCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCccc-CCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4588999999999998 4421 1100000001 111 568999999999999999999998
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=88.72 E-value=0.55 Score=50.92 Aligned_cols=57 Identities=19% Similarity=0.300 Sum_probs=39.3
Q ss_pred HHHHHHHhCCccEEEeC-cccccccCCCCCCC-----CCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIP-VGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~w~~~~~~~~~~-----~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|-|. |. ........-.+ .++ +..+.|+++|+.|+++||+||||+
T Consensus 35 ~~ldyl~~LGv~~I~l~Pi~-~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (558)
T 1uok_A 35 SKLDYLKELGIDVIWLSPVY-ESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (558)
T ss_dssp TTHHHHHHHTCCEEEECCCE-ECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcc-cCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 34789999999999983 32 11000000001 111 578999999999999999999998
|
| >2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* | Back alignment and structure |
|---|
Probab=88.61 E-value=17 Score=37.43 Aligned_cols=137 Identities=10% Similarity=-0.008 Sum_probs=79.0
Q ss_pred chHHHHHHHHHHHHHCCCEEEEEcCCC-CCCCCCCCCCCCCCCCCCCC-----hhhHHHHHHHHHHHHHHhcCCC-----
Q 009475 265 GSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLAARYANRP----- 333 (534)
Q Consensus 265 ~~l~~ld~~v~~a~~~Gl~VIlDlH~~-pG~qng~~~sg~~~g~~~W~-----~~~~~~~~~~w~~lA~ryk~~~----- 333 (534)
..++.+.+.+..+.+.|--|.|..|.. |........+. ..+. ....+.+.+.++.||+..+.-.
T Consensus 109 ~~~~~~~~~~~~~~~~Ggi~~isWh~~~p~~~~~~~~~~-----~~~~~i~~Gg~~~~~~~~~id~iA~~l~~L~~~~~~ 183 (396)
T 2vx5_A 109 VNFEKMQHWIKAGYSRGGVITISWHVFNPVSGGNSWDKT-----PAVHELIPGGARHATLKAYLDTFVAFNEGLADVDAQ 183 (396)
T ss_dssp CBHHHHHHHHHHHHHTTCEEEEECCCCCTTTSCCTTCCC-----CCHHHHSTTSTTHHHHHHHHHHHHHHHHTTCEECTT
T ss_pred CChHHHHHHHHHHHHCCCeEEEEEeeCCCCCCCCCcCch-----HHHHHHhCCChhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 356777777777888899999999965 32111111111 0010 1123455666777776554321
Q ss_pred ------eEEEEEeccCCCCC-------CCChHHHHHHHHHHHHHHHh-cCCceEEEEeCCCCCC-----ChhhhhcccCC
Q 009475 334 ------SLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRK-YTSTAYVIMSNRLGPA-----DHKELLSFASG 394 (534)
Q Consensus 334 ------~vlg~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~-~~p~~~Iiv~~~~~~~-----~~~~~~~~~~~ 394 (534)
.|+ |-+..|..+. ..+++.+++.++.+++++|+ .+-++++.+=+.-... +...+....++
T Consensus 184 G~~v~~PV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~~~~~YPG 262 (396)
T 2vx5_A 184 GNKHYPPII-FRPWHEHNGDWFWWGKGHASEQDYIALWRFTVHYLRDEKKLRNLIYAYSPDRSRIDMANFEAGYLYGYPG 262 (396)
T ss_dssp SCEECCCEE-EECSCSTTSSSSTTSBTTBCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBGGGSCGGGHHHHHTTTCCC
T ss_pred CCccCCCEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEcCCCCccccCCCccchhhcCCC
Confidence 344 8899999863 12578999999999999994 4556666552211100 11233333345
Q ss_pred Cce-EEEEEeeccc
Q 009475 395 LSR-VVIDVHYYNL 407 (534)
Q Consensus 395 ~~n-vv~d~H~Y~~ 407 (534)
+.. -++.+=.|..
T Consensus 263 DdyVDivG~D~Y~~ 276 (396)
T 2vx5_A 263 DAYVDIIGLDNYWD 276 (396)
T ss_dssp GGGCSEEEEECCGG
T ss_pred CceEEEEEEeccCC
Confidence 543 3777777754
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=88.54 E-value=0.57 Score=50.95 Aligned_cols=57 Identities=21% Similarity=0.305 Sum_probs=39.4
Q ss_pred HHHHHHHhCCccEEEeC-cccccccCCCCCCC--C---CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIP-VGWWIANDPTPPKP--F---VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIP-v~~w~~~~~~~~~~--~---~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=|. |. ..-.....-.+ | ++ +..+.|+++|+.|+++||+||||+
T Consensus 49 ~~LdyL~~LGv~~I~l~Pi~-~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 113 (570)
T 1m53_A 49 EKLDYLKSLGIDAIWINPHY-DSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 113 (570)
T ss_dssp HTHHHHHHHTCCEEEECCCE-ECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcc-cCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999983 32 11000000001 1 11 578999999999999999999998
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=88.53 E-value=0.33 Score=53.98 Aligned_cols=59 Identities=20% Similarity=0.252 Sum_probs=40.4
Q ss_pred HHHHH--HHHhCCccEEEeCcccccccCC---C----CCCCCC--------C--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFK--FLSSNGINAVRIPVGWWIANDP---T----PPKPFV--------G--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~--~ia~~G~N~VRIPv~~w~~~~~---~----~~~~~~--------~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+.++ .|+++|+++|=|+=-+.....+ . ....|. + +..+.|+++|+.|+++||+||||+
T Consensus 55 ~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~ 132 (680)
T 1cyg_A 55 INKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDF 132 (680)
T ss_dssp HHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35688 9999999999984211111000 0 001121 1 579999999999999999999998
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A | Back alignment and structure |
|---|
Probab=88.47 E-value=1.4 Score=44.01 Aligned_cols=104 Identities=18% Similarity=0.199 Sum_probs=68.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++.++.|++.|++.||| | +++ ..+++.++..||+|+|.+-... ...
T Consensus 16 ~~vv~llk~~~i~~VRl---Y----~~d-------------~~vL~A~~~tgi~v~lgv~n~~--------------~~~ 61 (306)
T 1aq0_A 16 STVVSMFKSNGIKSMRL---Y----APN-------------QAALQAVGGTGINVVVGAPNDV--------------LSN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---S----SCC-------------HHHHHHHTTSCCEEEEEECGGG--------------HHH
T ss_pred HHHHHHHHhcCCCEEEE---c----CCC-------------HHHHHHHHhcCCEEEEecccch--------------hhH
Confidence 45566789999999999 2 111 4677888899999999876310 000
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCc
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 371 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 371 (534)
.....+...+..+.-...| ....|-++-+-||+.. +. ...+..+++.+.+++++.+=+
T Consensus 62 -~a~~~~~a~~wv~~nv~~y-~~~~I~~I~VGNEvl~-g~-~~~L~~am~~v~~aL~~~gl~ 119 (306)
T 1aq0_A 62 -LAASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAG-GA-TRNLVPAMKNVHGALVAAGLG 119 (306)
T ss_dssp -HHHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCCG-GG-GGGHHHHHHHHHHHHHHTTCT
T ss_pred -hhhCHHHHHHHHHHhhccC-CCccEEEEEecccccC-CC-HHHHHHHHHHHHHHHHHCCCC
Confidence 0012223333333333445 4457888999999986 32 678889999999999987643
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=88.46 E-value=0.6 Score=50.58 Aligned_cols=58 Identities=24% Similarity=0.358 Sum_probs=39.5
Q ss_pred HHHHHHHhCCccEEEe-Cccccc----ccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWI----ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~----~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=| ||.-.. ..++......++ +..+.|+++|+.|+++||+||||+
T Consensus 36 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 100 (557)
T 1zja_A 36 EKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDV 100 (557)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4578999999999998 442100 000100000011 579999999999999999999998
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=88.32 E-value=0.63 Score=52.44 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHCCCEEEEEc---CCCCCC
Q 009475 267 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS 294 (534)
Q Consensus 267 l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~ 294 (534)
.+.|+++|+.|+++||+||||+ |...+.
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~ 302 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYNHTAEGG 302 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSCTTCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccCcc
Confidence 8999999999999999999998 665543
|
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=88.09 E-value=2.1 Score=42.89 Aligned_cols=105 Identities=20% Similarity=0.210 Sum_probs=68.7
Q ss_pred HHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW 310 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W 310 (534)
+-++.|++.|++.||| | +++ ..+++.++..||+|+|.+-... ...-
T Consensus 17 ~vv~llk~~~i~~vRl---Y----~~d-------------~~vl~A~~~tgi~v~lgv~n~~--------------~~~~ 62 (312)
T 2cyg_A 17 EVVSLYKSNNIARMRL---Y----DPN-------------QAALQALRNSNIQVLLDVPRSD--------------VQSL 62 (312)
T ss_dssp HHHHHHHHTTCCEEEE---S----SCC-------------HHHHHHHTTSCCEEEEEECHHH--------------HHHH
T ss_pred HHHHHHHhcCCCEEEE---c----CCC-------------HHHHHHHHhcCCEEEEeccccc--------------hhhh
Confidence 3456789999999999 2 111 3677888899999999876310 0000
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 009475 311 GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS 370 (534)
Q Consensus 311 ~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p 370 (534)
....+...+..+.-...|-....|.++-+-||+.........+..+++.+.+++++.+-
T Consensus 63 -a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~~~~~~~~L~~am~~v~~aL~~~gl 121 (312)
T 2cyg_A 63 -ASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGL 121 (312)
T ss_dssp -HHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTC
T ss_pred -hhCHHHHHHHHHHHHHhhCCCceEEEEEeccccccCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 00111222222333344645567888889999986444677899999999999998764
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=88.01 E-value=0.59 Score=50.49 Aligned_cols=57 Identities=26% Similarity=0.398 Sum_probs=39.6
Q ss_pred HHHHHHHhCCccEEEe-CcccccccCCCCCCC--C---CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIANDPTPPKP--F---VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~~~~~~~~--~---~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=| ||.- .......-.+ | ++ +..+.|+++|+.|+++||+||+|+
T Consensus 35 ~~Ldyl~~LGv~~I~l~Pi~~-~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (543)
T 2zic_A 35 SKLDYLQKLGVMAIWLSPVYD-SPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDL 99 (543)
T ss_dssp HTHHHHHHHTCSEEEECCCEE-CCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCccc-CCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4578999999999998 4421 1000000001 1 11 579999999999999999999998
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=87.94 E-value=0.39 Score=53.43 Aligned_cols=58 Identities=24% Similarity=0.305 Sum_probs=39.6
Q ss_pred HHHH--HHHhCCccEEEeCcccccccCC---------CCCCCCC--------C--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFK--FLSSNGINAVRIPVGWWIANDP---------TPPKPFV--------G--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~--~ia~~G~N~VRIPv~~w~~~~~---------~~~~~~~--------~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++ .|+++|+++|=|+=-+.....+ .....|+ + +..+.|+++|+.|+++||+||||+
T Consensus 59 ~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD~ 137 (683)
T 3bmv_A 59 NKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDF 137 (683)
T ss_dssp HHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4588 9999999999983211110000 0000111 1 569999999999999999999998
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=87.85 E-value=0.42 Score=52.63 Aligned_cols=56 Identities=21% Similarity=0.479 Sum_probs=39.2
Q ss_pred HHHHHHHhCCccEEEe-Cccccc-----ccCCCC----CCCCCCchHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWI-----ANDPTP----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~-----~~~~~~----~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+|+|-| |+.-.. ..++.. ...| +..+.|+++|+.|.++||+||+|+
T Consensus 158 ~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~--G~~~~~~~lv~~~H~~Gi~VilD~ 223 (618)
T 3m07_A 158 AKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAY--GTPDDFKAFIDAAHGYGLSVVLDI 223 (618)
T ss_dssp TTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTT--CCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCc--CCHHHHHHHHHHHHHCCCEEEEee
Confidence 3578999999999998 441100 011100 0112 468999999999999999999998
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=87.73 E-value=0.59 Score=51.24 Aligned_cols=58 Identities=24% Similarity=0.183 Sum_probs=39.8
Q ss_pred HHHHHHHhCCccEEEeCccccccc-------CC---CCCC------CCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIPVGWWIAN-------DP---TPPK------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~w~~~-------~~---~~~~------~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=|+=-+.... ++ .... ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 154 ~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 229 (599)
T 3bc9_A 154 ERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDA 229 (599)
T ss_dssp HHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 558899999999999842111000 00 0000 0122 578999999999999999999997
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=87.54 E-value=0.82 Score=51.18 Aligned_cols=100 Identities=17% Similarity=0.275 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHCCCEEEEEc---CCCCCC-----CCCCCCCCCCCCC--CCCC--------hhhHHHHHHHHHHHHHH
Q 009475 267 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS-----QNGNEHSATRDGF--QEWG--------DSNVADTVAVIDFLAAR 328 (534)
Q Consensus 267 l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~-----qng~~~sg~~~g~--~~W~--------~~~~~~~~~~w~~lA~r 328 (534)
.+.|+++|+.|+++||+||||+ |..+++ ...+-+....++. ..|. +...+..++..+..++.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W~~e 333 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT 333 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCSCHHHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccCcccccccCCCeeEEeCCCCCCccccCCCCcccCCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999999997 554321 0000000000111 0111 33445556666666666
Q ss_pred hcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 329 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 329 yk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
|.=+ .+ -||++.+. +.+ +++++..++++.+|+.++|-+
T Consensus 334 ~~vD-Gf-R~D~~~~~-----~~~----~~~~~~~~~~~~~p~~~ligE 371 (714)
T 2ya0_A 334 YKVD-GF-RFDMMGDH-----DAA----SIEEAYKAARALNPNLIMLGE 371 (714)
T ss_dssp HCCC-EE-EETTGGGS-----BHH----HHHHHHHHHHHHCTTCEEEEC
T ss_pred hCce-EE-EEeCCCCC-----CHH----HHHHHHHHHHHhCCCeEEEec
Confidence 6432 22 25555421 223 345667788888998766544
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=87.50 E-value=0.38 Score=53.11 Aligned_cols=58 Identities=19% Similarity=0.319 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCccEEEe-CcccccccC---CCC--C---------C-CCCC------chHHHHHHHHHHHHHCCCEEEEE
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWWIAND---PTP--P---------K-PFVG------GSSKVLDNAFDWAEKYGVKVIVD 287 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w~~~~---~~~--~---------~-~~~~------~~l~~ld~~v~~a~~~Gl~VIlD 287 (534)
.+-++.|+++|+|+|-| ||.-. ... ... + + .|.. +..+.|+++|+.|+++||+||||
T Consensus 123 ~~~l~~l~~lG~~~v~l~Pi~~~-~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD 201 (637)
T 1gjw_A 123 MLLLPFVKSLGADAIYLLPVSRM-SDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILD 201 (637)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEE-CCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCeec-ccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEE
Confidence 45689999999999997 44210 000 000 0 0 1110 23799999999999999999999
Q ss_pred c
Q 009475 288 L 288 (534)
Q Consensus 288 l 288 (534)
+
T Consensus 202 ~ 202 (637)
T 1gjw_A 202 F 202 (637)
T ss_dssp E
T ss_pred E
Confidence 7
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=87.31 E-value=0.39 Score=53.64 Aligned_cols=53 Identities=11% Similarity=0.288 Sum_probs=39.3
Q ss_pred HHHHHHHhCCccEEEe-CcccccccCCCCCCCC--------CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIANDPTPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~~~~~~~~~--------~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|=| ||.- . +.. ..| ++ +..+.|+++|+.|+++||+||||+
T Consensus 269 ~kLdyLk~LGvt~IwL~Pi~~-s---~~~-~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 332 (696)
T 4aee_A 269 KHIDHLEDLGVETIYLTPIFS-S---TSY-HRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDI 332 (696)
T ss_dssp TTHHHHHHHTCCEEEECCCEE-E---SSS-SCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhHHHHHcCCCEEEECCccc-C---CCC-CCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEec
Confidence 4588999999999998 4421 0 100 111 11 578999999999999999999997
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=87.24 E-value=0.78 Score=50.12 Aligned_cols=57 Identities=21% Similarity=0.286 Sum_probs=39.2
Q ss_pred HHHHHHHhCCccEEEe-CcccccccCCCCCCC--C---CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIANDPTPPKP--F---VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~~~~~~~~--~---~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+++|=| ||. ........-.+ | ++ +..+.|+++|+.|+++||+||+|+
T Consensus 44 ~~Ldyl~~LGv~~i~l~Pi~-~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 108 (589)
T 3aj7_A 44 SKLEYIKELGADAIWISPFY-DSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDL 108 (589)
T ss_dssp HTHHHHHHHTCSEEEECCCE-ECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcc-cCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4578999999999998 332 11000000000 0 11 578999999999999999999998
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* | Back alignment and structure |
|---|
Probab=87.20 E-value=0.9 Score=51.70 Aligned_cols=58 Identities=16% Similarity=0.199 Sum_probs=39.6
Q ss_pred HHHHHHHhCCccEEEeCccccccc-------------CCCCCCCCC----C--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIPVGWWIAN-------------DPTPPKPFV----G--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~w~~~-------------~~~~~~~~~----~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-+..|+++|+++|=|+=-+.... ++....... + +..+.|+++|+.|+++||+||+|+
T Consensus 637 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~VilD~ 713 (844)
T 3aie_A 637 KNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADW 713 (844)
T ss_dssp HTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 458899999999999842111110 010000001 1 579999999999999999999998
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=86.46 E-value=0.97 Score=45.26 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=70.1
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++-++.|++.|++.||| | +++ ..+++.++..||+|+|.+-... ...
T Consensus 16 ~~vv~llk~~~i~~vRl---Y----~~d-------------~~vL~A~~~tgi~v~lgv~n~~--------------~~~ 61 (306)
T 1ghs_A 16 SDVVQLYRSKGINGMRI---Y----FAD-------------GQALSALRNSGIGLILDIGNDQ--------------LAN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---S----SCC-------------HHHHHHTTTSCCEEEEECCGGG--------------HHH
T ss_pred HHHHHHHHhcCCCEEEE---c----CCC-------------HHHHHHHHhcCCEEEEeccccc--------------hhh
Confidence 44556689999999999 2 111 4677888899999999876310 000
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCc-eEEE
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST-AYVI 375 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~Ii 375 (534)
.....+...+..+.-...|-....|.++-+-||+.. + ....+..+++.+-+++++.+-+ ..|.
T Consensus 62 -~a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~-~-~~~~L~~am~~v~~aL~~~gl~~ikVs 125 (306)
T 1ghs_A 62 -IAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQG-G-ATQSILPAMRNLNAALSAAGLGAIKVS 125 (306)
T ss_dssp -HHHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCCG-G-GGGGHHHHHHHHHHHHHHHTCTTSEEE
T ss_pred -hhhCHHHHHHHHHHHHhhhCCCceEEEEEEeccccC-C-CHHHHHHHHHHHHHHHHHCCCCceeEE
Confidence 001122222223333344544567888889999986 3 5678899999999999987643 3443
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=86.40 E-value=0.77 Score=51.48 Aligned_cols=62 Identities=29% Similarity=0.556 Sum_probs=41.8
Q ss_pred HHHHHHHhCCccEEEe-Cccc---------------ccccCCCC---CCC-CCC-----chHHHHHHHHHHHHHCCCEEE
Q 009475 231 EDFKFLSSNGINAVRI-PVGW---------------WIANDPTP---PKP-FVG-----GSSKVLDNAFDWAEKYGVKVI 285 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~---------------w~~~~~~~---~~~-~~~-----~~l~~ld~~v~~a~~~Gl~VI 285 (534)
.-+..|+++|+|+|=| ||.- |. .++.. .++ |.. ...+.|+++|+.|+++||+||
T Consensus 206 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wG-Y~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~Vi 284 (718)
T 2vr5_A 206 QMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWG-YDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVI 284 (718)
T ss_dssp HHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSC-CCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEE
T ss_pred hhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccC-cCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEE
Confidence 4699999999999998 4421 11 11100 001 110 127999999999999999999
Q ss_pred EEc---CCCCC
Q 009475 286 VDL---HAAPG 293 (534)
Q Consensus 286 lDl---H~~pG 293 (534)
||+ |...+
T Consensus 285 lDvV~NH~~~~ 295 (718)
T 2vr5_A 285 IDVVYNHTAEG 295 (718)
T ss_dssp EEECCSCCSSC
T ss_pred EEeccCcccCc
Confidence 998 66544
|
| >3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* | Back alignment and structure |
|---|
Probab=86.02 E-value=7.9 Score=34.27 Aligned_cols=99 Identities=10% Similarity=0.203 Sum_probs=63.6
Q ss_pred eeEEeeee-ceeEEEeecC---CCceEEeccCCCCCcce----EEEEEecC---ceEEEEeeCCcEEEeecCC--CCceE
Q 009475 67 QVQFMSTK-FQKYIAAESG---GGTIVVANRTSASGWET----FRLWRVNE---TFYNFRVNNKQFIGLENQG--QGNGL 133 (534)
Q Consensus 67 ~~~~~s~~-~~~~~~a~~~---g~~~~~anr~~~~~wet----f~~~~~~~---~~~~~~~~n~~~v~~~~~g--~~~~~ 133 (534)
+..|+++. .||+|-.+++ -|+.|+-=...-+.-.. +++.++++ +++.|+.. |+++.+.+++ .|..|
T Consensus 6 ~Y~I~n~~~sgk~lDv~~~sta~Gt~V~~w~~~g~~nQ~~~~~W~~~~~~~~~~g~y~i~n~-G~~Ldv~~~~ta~Gt~v 84 (148)
T 3nbc_A 6 TYNITNVAYTNRLIDLTGSNPAENTLIIGHHLNKTPSGYGNQQWTLVQLPHTTIYTMQAVNP-QSYVRVRDDNLVDGAAL 84 (148)
T ss_dssp EEEEEESSCTTCEEEEGGGCCSTTEEEEEECCCSTTTCCGGGCEEEEECTTSSEEEEEESSS-CCEEEEGGGCCSTTCBE
T ss_pred EEEEEEecCCCCeEECCCCcCCCCcEEEEeCCCCChhheeecEEEEEECCCcccceEEEEEC-CcEEEccCCCCCCCcEE
Confidence 48899999 9999988775 24444443323334446 88889888 99999988 9999876431 13345
Q ss_pred EEeecCCCCCceEEEEEeCCCCceEEEEecC-CceEEec
Q 009475 134 VAVSNTAGYSETFQIVRKDGDSSRVRLSASN-GMFIQAI 171 (534)
Q Consensus 134 ~a~~~~~~~~EtF~ivr~~~~~~~v~i~~~n-G~~Lq~~ 171 (534)
+.-. . ...|+|....++ ..++|...+ |+-|.+.
T Consensus 85 ~~~~-~---~q~W~i~~~~~~-G~y~I~~~~sg~~Ldv~ 118 (148)
T 3nbc_A 85 VGSQ-Q---PTPVSIESAGNS-GQFRIKIPNLGLALTLP 118 (148)
T ss_dssp EEES-S---CCCEEEEECSST-TCEEEECTTSSEEEECC
T ss_pred ecCC-C---CcEEEEEEccCC-CeEEEEeCCCCeEEEee
Confidence 5432 2 356777764322 247777764 6666554
|
| >3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=85.98 E-value=1.5 Score=46.68 Aligned_cols=58 Identities=16% Similarity=0.196 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhcCCC---eEEEEEeccCCCC----------CCCChHHHHHHHHHHHHHHHhcCCceEEE
Q 009475 318 TVAVIDFLAARYANRP---SLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVI 375 (534)
Q Consensus 318 ~~~~w~~lA~ryk~~~---~vlg~eL~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~Ii 375 (534)
..++.+.|.++|+... .|-.|+|-|||.. ...+.+++.+++.+..++||+++|+..|+
T Consensus 152 ~~e~v~~l~~~~G~~~~p~~Vkyw~lgNEpdlW~~tH~dvhp~~~t~eEY~~~~~~~AkAmK~vDP~ikl~ 222 (517)
T 3ik2_A 152 MDEFVNYLVNKYGSASGSKGIKGYSLDNEPSLWPSTHPLIHPDKTKCSEVLDKDTQLAQVVKKIDPAAETF 222 (517)
T ss_dssp HHHHHHHHHHHHCCTTSTTSCCEEEESSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCCCceeEEecCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 4567888999998663 7888999999942 23568899999999999999999996654
|
| >1hcd_A Hisactophilin; actin binding; NMR {Dictyostelium discoideum} SCOP: b.42.5.2 PDB: 1hce_A | Back alignment and structure |
|---|
Probab=85.83 E-value=12 Score=30.10 Aligned_cols=98 Identities=11% Similarity=0.219 Sum_probs=71.9
Q ss_pred EEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCceEEE
Q 009475 69 QFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQI 148 (534)
Q Consensus 69 ~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~EtF~i 148 (534)
+||| -+|-||+||.- .|-.--.--..=.-|-+-+-+ +.++||+.-|+||+... ...+--.----|+-.-|.+
T Consensus 5 afk~-hhgh~lsae~~---~vkthhghhdhhthfhvenhg-~kvalrth~gkyvsigd---hkqvylshh~hg~hslfhl 76 (118)
T 1hcd_A 5 AFKS-HHGHFLSAEGE---AVKTHHGHHDHHTHFHVENHG-GKVALKTHCGKYLSIGD---HKQVYLSHHLHGDHSLFHL 76 (118)
T ss_dssp EEES-STTCEEEEETT---EEEEECSCSSCCCCCEEEEET-TEEEEESSSSCEEEEEE---TTEEEEECCCSSSSSSBEE
T ss_pred hhhh-ccCeeeecccc---ccccccCcccccceEEeecCC-ceEEEEeccCcEEEecC---CceEEEEeeecCcceeEee
Confidence 6886 59999999974 444433333444567776664 59999999999999964 2345556666778888998
Q ss_pred EEeCCCCceEEEEecCCceEEecccceee
Q 009475 149 VRKDGDSSRVRLSASNGMFIQAISETRLT 177 (534)
Q Consensus 149 vr~~~~~~~v~i~~~nG~~Lq~~g~~~v~ 177 (534)
.--. ..|.|+..+-.|+.+..-..|.
T Consensus 77 ehh~---gkvsikghhhhyi~~d~hghv~ 102 (118)
T 1hcd_A 77 EHHG---GKVSIKGHHHHYISADHHGHVS 102 (118)
T ss_dssp EEET---TEEEEECSTTCEEEECGGGCEE
T ss_pred eccC---CEEEEecccceEEeccCCcccc
Confidence 8874 3599999999999988655444
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=85.70 E-value=1.1 Score=51.96 Aligned_cols=59 Identities=12% Similarity=0.227 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCC-------CCC----CCC------CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDP-------TPP----KPF------VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~-------~~~----~~~------~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+.++.|+++|+++|=|+=-+....++ ..+ ..| .+ +..+.|+++|+.|+++||+||+|+
T Consensus 856 ~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~GI~VIlDv 933 (1108)
T 3ttq_A 856 AKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADV 933 (1108)
T ss_dssp HHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 456899999999999984322211110 000 000 11 578999999999999999999998
|
| >2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* | Back alignment and structure |
|---|
Probab=84.87 E-value=5.8 Score=42.54 Aligned_cols=107 Identities=22% Similarity=0.261 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHCCC-EEEEEcCCCCC--CC-CCC-----CCCCC-------CCCCC----CCChhhHHHHHHHHHHHHHH
Q 009475 269 VLDNAFDWAEKYGV-KVIVDLHAAPG--SQ-NGN-----EHSAT-------RDGFQ----EWGDSNVADTVAVIDFLAAR 328 (534)
Q Consensus 269 ~ld~~v~~a~~~Gl-~VIlDlH~~pG--~q-ng~-----~~sg~-------~~g~~----~W~~~~~~~~~~~w~~lA~r 328 (534)
.+++.++||++.|. ..|+.+.-.+. .+ ++. .+.+. ..+.+ ...++......++++.|..+
T Consensus 89 ~~~~f~~~~~~~g~~~~m~tvnl~~~~~~d~a~~~~e~~~~~~~~w~~~~~~~~~~~~~~p~~~~g~~~~~ewv~yl~~~ 168 (519)
T 2e4t_A 89 VVTTFHDKALSKNVPYTLITLQAAGYVSADGNGPVSQEETAPSSRWKEVKFEKGAPFSLTPDTEDDYVYMDEFVNYLVNK 168 (519)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSEEESCCCEECCGGGCSSSTTEEEEESCCCSCCCSSCCTTSSEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCceEEEEecCCccchhccccchhhccCCcccccccccccCCccccCCCCCCChHHHHHHHHHHHHh
Confidence 79999999999998 88888874321 00 000 01000 00000 00001111245566777778
Q ss_pred hcCC--C-eEEEEEeccCCCC----------CCCChHHHHHHHHHHHHHHHhcCCceEEE
Q 009475 329 YANR--P-SLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVI 375 (534)
Q Consensus 329 yk~~--~-~vlg~eL~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~Ii 375 (534)
|... | .|--|+|-|||.. ...+.+.+.+.+.+..+++|.++|+..++
T Consensus 169 nG~~~~P~~VkyW~lGNE~dgW~~gh~~~~p~~~t~~ey~~~~~~~AkamK~~DP~i~l~ 228 (519)
T 2e4t_A 169 YGNASTPTGIKGYSIDNEPALWSHTHPRIHPDNVTAKELIEKSVALSKAVKKVDPYAEIF 228 (519)
T ss_dssp HCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred cCCCcCCCCccEEEeCccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 7654 2 4666899999932 12357899999999999999999996655
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* | Back alignment and structure |
|---|
Probab=83.81 E-value=1.3 Score=49.04 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=39.5
Q ss_pred HHHHHHHhCCccEEEeCcccccccCCCCCCCC--------CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~--------~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+++|-|+=-+.... ......| ++ +..+.|+++|+.|+++||+||+|+
T Consensus 115 ~~LdyL~~lGv~~v~l~P~~~~~~-~~~~~GY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~ 181 (655)
T 3ucq_A 115 ERLDYLEGLGVKYLHLMPLLRPRE-GENDGGYAVQDYRAVRPDLGTMDDLSALARALRGRGISLVLDL 181 (655)
T ss_dssp TTHHHHHHTTCCEEEECCCEEECS-SCCGGGTSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCcCCCC-CCCCCCcCCcCcCccCccCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 457899999999999952221100 0000011 11 578999999999999999999997
|
| >3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.28 E-value=19 Score=31.59 Aligned_cols=82 Identities=16% Similarity=0.235 Sum_probs=56.3
Q ss_pred ceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEee-CCcEEEeecCCCCceEEEeecCCCCCc
Q 009475 66 TQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAGYSE 144 (534)
Q Consensus 66 ~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~g~~~~~~a~~~~~~~~E 144 (534)
..|+||++..|.|||-..-| .|.+.+..-..=--+++...+.+.+.++.. .+.||+.+.. | .+-+++..-.+.-
T Consensus 51 G~V~I~gv~sg~yL~m~~~G--~v~Gs~~~~~ec~flE~~~e~~g~v~i~~~~sg~Ylamnk~--G-rl~Gs~~~s~eC~ 125 (143)
T 3snv_A 51 GEVLLKSTETGQYLRINPDG--TVDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPD--G-TVDGTRDRSDTHI 125 (143)
T ss_dssp TEEEEEETTTTEEEEECTTS--BEEEECCTTCTTSEEEEEECSTTEEEEEETTTCCEEEECTT--S-BEEEESCTTCTTC
T ss_pred CeEEEEEEcccEEEeECCCC--CEeecccCCCcceEEEEEecCCcEEEEEEeeCCEEEEEcCC--C-cCcCcCCCCCCee
Confidence 48999999999999997755 455655433333333566777888889887 8999999975 3 4677775433444
Q ss_pred eEEEEEeC
Q 009475 145 TFQIVRKD 152 (534)
Q Consensus 145 tF~ivr~~ 152 (534)
-++.+-.+
T Consensus 126 F~E~~~en 133 (143)
T 3snv_A 126 QFQISPEG 133 (143)
T ss_dssp CEEEEECS
T ss_pred EEEEEEeC
Confidence 45544443
|
| >3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* | Back alignment and structure |
|---|
Probab=83.15 E-value=7.7 Score=38.42 Aligned_cols=109 Identities=10% Similarity=0.145 Sum_probs=69.2
Q ss_pred ccceeEEeeeeceeEEEeecC---CCceEEecc---CCCCCcceEEEEEe--cCceEEEEee-CCcEEEeecCCC--Cce
Q 009475 64 DGTQVQFMSTKFQKYIAAESG---GGTIVVANR---TSASGWETFRLWRV--NETFYNFRVN-NKQFIGLENQGQ--GNG 132 (534)
Q Consensus 64 ~g~~~~~~s~~~~~~~~a~~~---g~~~~~anr---~~~~~wetf~~~~~--~~~~~~~~~~-n~~~v~~~~~g~--~~~ 132 (534)
.+....|+++..||.|-..++ -|++|+--- ..-+.-.+|++..+ +++.+.|+.. .|+.+.+.+++. |..
T Consensus 4 ~~G~Y~I~N~~SGk~LDV~g~stanGa~Vqqw~~~g~ng~~nQqW~~~~~~G~~G~Y~I~n~~SGkcLDV~~~stanGt~ 83 (293)
T 3ef2_A 4 RRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTA 83 (293)
T ss_dssp CSEEEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEE
T ss_pred CCcEEEEEECCCCCEEEcCCCCCCCCcEEEEeecCCCCCCccEEEEEeeccCCCceEEEEECCCCCEEecCCCCCCCCCE
Confidence 345789999999998877654 234444221 22234557788885 4789999976 799999874321 223
Q ss_pred EEEee---cCCCCCceEEEEEeCCCCceEEEEec-CCceEEeccc
Q 009475 133 LVAVS---NTAGYSETFQIVRKDGDSSRVRLSAS-NGMFIQAISE 173 (534)
Q Consensus 133 ~~a~~---~~~~~~EtF~ivr~~~~~~~v~i~~~-nG~~Lq~~g~ 173 (534)
|+--. ..-+....|++....++ ..++|... +|+.|.+.+.
T Consensus 84 V~qw~~~~~~~g~nQqW~l~~~~g~-G~y~I~n~~SGk~LDV~g~ 127 (293)
T 3ef2_A 84 VNGWQGTAFTTNPHQLWTIKKSSDG-TSYKIQNYGSKTFVDLVNG 127 (293)
T ss_dssp EEEECCCTTCCCGGGCEEEEECTTS-SSEEEEETTTCCEEEEGGG
T ss_pred EEEeccCCCCCCCCcEEEEEEeCCC-CEEEEEECCCCcEEEeCCC
Confidence 44433 13356778888887332 23666664 5888887753
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=83.11 E-value=0.83 Score=50.61 Aligned_cols=65 Identities=23% Similarity=0.392 Sum_probs=42.7
Q ss_pred HHHHHHHHhCCccEEEe-Cccccc--------------ccCCC----CCCCCCCc---hHHHHHHHHHHHHHCCCEEEEE
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWWI--------------ANDPT----PPKPFVGG---SSKVLDNAFDWAEKYGVKVIVD 287 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w~--------------~~~~~----~~~~~~~~---~l~~ld~~v~~a~~~Gl~VIlD 287 (534)
+.-+..|+++|+|+|=| ||.-.. ..++. +...|..+ ..+.|+++|+.|+++||+||||
T Consensus 182 ~~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~VilD 261 (657)
T 2wsk_A 182 PVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILD 261 (657)
T ss_dssp HHHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccchHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEEEE
Confidence 34599999999999997 442110 00100 00012111 4899999999999999999999
Q ss_pred c---CCCCCC
Q 009475 288 L---HAAPGS 294 (534)
Q Consensus 288 l---H~~pG~ 294 (534)
+ |...+.
T Consensus 262 ~V~NH~~~~~ 271 (657)
T 2wsk_A 262 IVLNHSAELD 271 (657)
T ss_dssp ECCSCCTTCS
T ss_pred Eeeccccccc
Confidence 7 665443
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=82.97 E-value=1.1 Score=49.26 Aligned_cols=60 Identities=17% Similarity=0.262 Sum_probs=42.2
Q ss_pred HHHHHHHh-CCccEEEe-Ccc----cccccCCCC----CCCCCCchHHHHHHHHHHHHHCC--C--EEEEEc---CCCCC
Q 009475 231 EDFKFLSS-NGINAVRI-PVG----WWIANDPTP----PKPFVGGSSKVLDNAFDWAEKYG--V--KVIVDL---HAAPG 293 (534)
Q Consensus 231 ~d~~~ia~-~G~N~VRI-Pv~----~w~~~~~~~----~~~~~~~~l~~ld~~v~~a~~~G--l--~VIlDl---H~~pG 293 (534)
+-++.|++ +|+|+|=| ||. +|- .++.. ...| +..+.|+++|+.|+++| | +||||+ |..+.
T Consensus 195 ~~LdyLk~~LGvt~I~L~Pi~~~~~~~G-Yd~~dy~~id~~~--Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~~~~ 271 (637)
T 1ji1_A 195 QKLGYIKKTLGANILYLNPIFKAPTNHK-YDTQDYMAVDPAF--GDNSTLQTLINDIHSTANGPKGYLILDGVFNHTGDS 271 (637)
T ss_dssp HTHHHHHTTTCCCEEEESCCEECSSSSC-CSCSEEEEECTTT--CCHHHHHHHHHHHHCSSSSSCCEEEEEECCSBCCTT
T ss_pred HhHHHHHhccCCCEEEECCCccCCCCCC-cCccchhhhcccc--CCHHHHHHHHHHHHhCCCCccceEEEEECcccCCCC
Confidence 45789999 99999998 442 111 11110 0112 56899999999999999 9 999998 65543
|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A | Back alignment and structure |
|---|
Probab=82.51 E-value=5.4 Score=45.61 Aligned_cols=169 Identities=11% Similarity=0.078 Sum_probs=100.2
Q ss_pred HHHHHHHHhCCccEEEeCccc---c--------------------------cccCC--CCCCCCC----CchHHHHHHHH
Q 009475 230 DEDFKFLSSNGINAVRIPVGW---W--------------------------IANDP--TPPKPFV----GGSSKVLDNAF 274 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~---w--------------------------~~~~~--~~~~~~~----~~~l~~ld~~v 274 (534)
|..|+.||=.|+|..=-.++- | ..+.. .-++|.. +..++.=++++
T Consensus 314 EreIDWMAL~GiNlpLa~~GqEavw~~v~~~lG~t~~ei~~ff~GPAflaW~rMgNl~~wgGPLp~~w~~~q~~Lq~kIl 393 (914)
T 4a4a_A 314 EEFLDWCAMNGVNLVLDIIGQEEVLRRTLNEFGYSDEEVKEFISGPAYFAWFYMQNMTGFGGPLPNDWFEQRAELGRKMH 393 (914)
T ss_dssp HHHHHHHHHTTCCEEECCTTHHHHHHHHHGGGTCCHHHHHHHSCCTTCHHHHHTTSCCSTTCCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhhhhhhhHHHHHHHHHHcCCCHHHHHHhcCCchhhHHHHhcCccccCCCCCHHHHHHHHHHHHHHH
Confidence 899999999999977644431 1 01100 0013332 34556667899
Q ss_pred HHHHHCCCEEEEEcCC----------CCCC-------CCCCCCCCCCCCCCCCC----hhhHHHHHHHHHHHHHHhcCCC
Q 009475 275 DWAEKYGVKVIVDLHA----------APGS-------QNGNEHSATRDGFQEWG----DSNVADTVAVIDFLAARYANRP 333 (534)
Q Consensus 275 ~~a~~~Gl~VIlDlH~----------~pG~-------qng~~~sg~~~g~~~W~----~~~~~~~~~~w~~lA~ryk~~~ 333 (534)
+..++.||..||=-.. .|.. .+|+......+ +.+. +-..+-...+.+...+.|+...
T Consensus 394 ~RmrelGM~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~gf~~~~~~~--~~~l~p~dplF~~i~~~F~~~q~~~yG~~~ 471 (914)
T 4a4a_A 394 DRMQSFGINPVLQGYSGMVPRDFKEKNQEAQTISQGGWCGFDRPDMLK--TYVNEGEADYFQKVADVFYEKQKEVFGDVT 471 (914)
T ss_dssp HHHHHHTCEEEEECCSCEECTTHHHHSTTCCEECCCEETTEECCEEEC--SSCCTTSCCHHHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHcCCeecCCCcCCCCChHHHhhCCCCeeecCCCCCCCCCchhcc--cccCCCCChHHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999984211 1211 11111000000 1111 3345566778899999999878
Q ss_pred eEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhcccCC-CceEEEEEe
Q 009475 334 SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASG-LSRVVIDVH 403 (534)
Q Consensus 334 ~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~~~~-~~nvv~d~H 403 (534)
++.+.|++||=..+. + ..+....+.+++++++.+|+.+-++.+ |.......++.-.+. +.=+|+|.+
T Consensus 472 h~Y~~D~FnE~~~~~-~-~~l~~~~~~v~~am~~~dp~AvWv~Qg-W~~~~~~~~L~~vp~~~~mlvLDL~ 539 (914)
T 4a4a_A 472 NFYGVDPFHQGGNTG-D-LDNGKIYEIIQNKMIEHDNDAVWVIQN-WQGNPSNNKLEGLTKKDQAMVLDLF 539 (914)
T ss_dssp SEEECCTTTTSCCCT-T-CCHHHHHHHHHHHHHHHCTTCEEEEEE-BTTBSCHHHHTTCSCGGGEEEEETT
T ss_pred cccccCccccCCCCC-C-cCHHHHHHHHHHHHHHhCCCCEEEEcc-cCCCChHHHHhCCCCCCCEEEEEcc
Confidence 899999999942211 1 236788899999999999998766654 321111233332233 556777754
|
| >3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A | Back alignment and structure |
|---|
Probab=82.37 E-value=19 Score=35.40 Aligned_cols=110 Identities=11% Similarity=0.151 Sum_probs=73.0
Q ss_pred CCCCcccccceeEEeeeecee-EEEeecCCCceEEeccCCCCCcceEEEEEec-CceEEEEee-C-CcEEEeecCCCCce
Q 009475 57 IPNKDLLDGTQVQFMSTKFQK-YIAAESGGGTIVVANRTSASGWETFRLWRVN-ETFYNFRVN-N-KQFIGLENQGQGNG 132 (534)
Q Consensus 57 ~~~~~~~~g~~~~~~s~~~~~-~~~a~~~g~~~~~anr~~~~~wetf~~~~~~-~~~~~~~~~-n-~~~v~~~~~g~~~~ 132 (534)
..+++|.+|+...++|..+.- ++.-. .++...+-++. -+.-..|++...+ ++.+.+|.. + +..++.+.. +..
T Consensus 4 ~~~~~~~~g~~~~I~s~~~~n~vl~~~-~~~~v~~~~~~-~~~~Q~W~~~yd~~~g~Y~I~n~~~~~lvL~~~~~--~~~ 79 (286)
T 3aj6_A 4 TNANDLRNNEVFFISPSNNTNKVLDKI-SQSEVKLWNKL-SGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAP--LSS 79 (286)
T ss_dssp CCTTSCCTTCEEEEEETTCTTEEEEEC-SSSCEEEEECC-CCGGGCEEEEEETTTTEEEEEESSSSCCEEEECTT--SSC
T ss_pred ccCCcCCCCCEEEEEEcCCCceEEecc-CCCcEEEecCC-CCcCCeEEEEEcCCCCeEEEEECCCCcEEEEccCC--CCC
Confidence 457789999999999885544 44443 33344444443 3466788888765 689999997 3 445565543 234
Q ss_pred EEEeecCCCCCceEEEEEeC-CCCceEEEEe--cCCceEEecc
Q 009475 133 LVAVSNTAGYSETFQIVRKD-GDSSRVRLSA--SNGMFIQAIS 172 (534)
Q Consensus 133 ~~a~~~~~~~~EtF~ivr~~-~~~~~v~i~~--~nG~~Lq~~g 172 (534)
|..-...-..-..++|++.. |+. ++|+. +.++.|.+.+
T Consensus 80 V~~~~~~g~~~Q~W~l~~~~~dG~--y~i~n~~~s~~vLdv~~ 120 (286)
T 3aj6_A 80 VSVKTDTNGDNQYWYLLQNYISRN--VIIRNYMNPNLVLQYNI 120 (286)
T ss_dssp EEEECCCCCGGGCEEEEECTTTCC--EEEEESSCTTEEEEECT
T ss_pred EEEeCCCCCcceEEEEEEeCCCCE--EEEEECCCCceEEEecC
Confidence 77777777777888999874 554 66666 4477787763
|
| >3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A | Back alignment and structure |
|---|
Probab=81.90 E-value=23 Score=30.52 Aligned_cols=101 Identities=17% Similarity=0.239 Sum_probs=70.1
Q ss_pred eeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEee-CCcEEEeecCCCCceEEEeecCCCCCce
Q 009475 67 QVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAGYSET 145 (534)
Q Consensus 67 ~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~g~~~~~~a~~~~~~~~Et 145 (534)
.|-|++..+|.||---..| .|-+-|+.-+.--.+++..+.-+.++++.. .+.|++.+.. +.|.+++..-.+..-
T Consensus 7 ~~~~~~~~~g~~L~I~~dG--~V~Gt~~~~~~~s~l~~~~v~~G~V~I~g~~sg~yL~m~~~---G~v~Gs~~~s~ec~f 81 (132)
T 3q7x_A 7 EVLLRSTETGQFLRINPDG--TVDGTRDRSDPGIQFQISPEGNGEVLLRSTETGQFLRINPD---GTVDGTRDRSDPGIQ 81 (132)
T ss_dssp CEEEEETTTCCEEEECTTS--BEEEECCTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTT---SBEEEECC-CCGGGC
T ss_pred hheeeeccCcEEEEECCCC--cEEeecCCCCCCcEEEEEecccCEEEEEEEcccEEEEECCC---CCEeeccCCCCCcee
Confidence 4778899999999775433 556666665667788888888899999988 9999999853 358887764333333
Q ss_pred EEEEEeCCCCceEEEEe-cCCceEEecccc
Q 009475 146 FQIVRKDGDSSRVRLSA-SNGMFIQAISET 174 (534)
Q Consensus 146 F~ivr~~~~~~~v~i~~-~nG~~Lq~~g~~ 174 (534)
++++..+.+ .+.|+. ..|.||..+...
T Consensus 82 lE~~~~~~g--~v~ikg~~sg~YLamnk~G 109 (132)
T 3q7x_A 82 FQISPEGNG--EVLLRSTETGQFLRINPDG 109 (132)
T ss_dssp EEEEEEETT--EEEEEETTTCCEEEECTTS
T ss_pred EEEEeecCc--EEEEEeccCCeEEEECCCC
Confidence 565554332 466765 468888765433
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=81.77 E-value=7.7 Score=34.25 Aligned_cols=85 Identities=16% Similarity=0.339 Sum_probs=55.4
Q ss_pred ceeEEeeeeceeEEEeecC---CCceEEeccCCCCCcceEEEEEecCceEEEEee-CCcEEEeecCC--CCceEEEeecC
Q 009475 66 TQVQFMSTKFQKYIAAESG---GGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQG--QGNGLVAVSNT 139 (534)
Q Consensus 66 ~~~~~~s~~~~~~~~a~~~---g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~g--~~~~~~a~~~~ 139 (534)
....|++...|+.|....+ .|+.|+.-.-.-+.-..|++...+++.|.|+.. .|+.+.+.+++ .|..|+-....
T Consensus 74 g~y~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~~~~~Q~W~~~~~g~g~~~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~ 153 (165)
T 3pg0_A 74 GYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYSYS 153 (165)
T ss_dssp TEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEECSSSCEEEEETTTCCEEEEGGGCCSTTCBEEEECCC
T ss_pred CEEEEEECCCCCEEEeCCCCCCCCCEEEEEcCCCCCccEEEEEECCCCEEEEEECCCCcEEEcCCCCCCCCCEEEEeCCC
Confidence 4678888888998887653 345565444444466778888888899999986 78877776431 12335544444
Q ss_pred CCCCceEEEEE
Q 009475 140 AGYSETFQIVR 150 (534)
Q Consensus 140 ~~~~EtF~ivr 150 (534)
-++...|++++
T Consensus 154 g~~nQ~W~~~~ 164 (165)
T 3pg0_A 154 GGDNQQWRLVD 164 (165)
T ss_dssp CCGGGCEEEEE
T ss_pred CCccceEEEEE
Confidence 45555666543
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A | Back alignment and structure |
|---|
Probab=81.17 E-value=2.5 Score=49.03 Aligned_cols=61 Identities=21% Similarity=0.314 Sum_probs=41.4
Q ss_pred HHHHHHHhCCccEEEeCcccccccC-----C--CCC----CCC------CC--chHHHHHHHHHHHHHCCCEEEEEc---
Q 009475 231 EDFKFLSSNGINAVRIPVGWWIAND-----P--TPP----KPF------VG--GSSKVLDNAFDWAEKYGVKVIVDL--- 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~w~~~~-----~--~~~----~~~------~~--~~l~~ld~~v~~a~~~Gl~VIlDl--- 288 (534)
+.+..|+++|+++|=|+=-+....+ + ..+ ..| .+ +..+.|+++|+.|+++||+||||+
T Consensus 690 ~kldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VIlDvV~N 769 (1039)
T 3klk_A 690 QNADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADWVPD 769 (1039)
T ss_dssp HTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 4588999999999998422211100 0 000 011 11 578999999999999999999998
Q ss_pred CCC
Q 009475 289 HAA 291 (534)
Q Consensus 289 H~~ 291 (534)
|.+
T Consensus 770 Hta 772 (1039)
T 3klk_A 770 QIY 772 (1039)
T ss_dssp EEC
T ss_pred CcC
Confidence 554
|
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* | Back alignment and structure |
|---|
Probab=81.01 E-value=12 Score=37.42 Aligned_cols=105 Identities=14% Similarity=0.162 Sum_probs=69.5
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
.+-++.||+.|++.||| | +++ ..+++.++..||+|+|.+-... ...
T Consensus 17 ~~vv~llks~gi~~VRl---Y----daD-------------~~vL~Al~~sgi~v~vGV~n~~--------------l~~ 62 (316)
T 3em5_A 17 SEVIALYKKSNITRMRI---Y----DPN-------------QAVLEALRGSNIELILGVPNSD--------------LQS 62 (316)
T ss_dssp HHHHHHHHHTTCCEEEC---S----SCC-------------HHHHHHHTTCCCEEEEEECGGG--------------HHH
T ss_pred HHHHHHHHHcCCCEEEE---e----cCC-------------HHHHHHhhcCCceEEEecccch--------------hhh
Confidence 45677789999999999 1 221 2578889999999999985310 000
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC-C---hHHHHHHHHHHHHHHHhcCC
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-A---LDTLKSYYKAGYDAVRKYTS 370 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~-~---~~~~~~~~~~~~~aIR~~~p 370 (534)
-.......+..+.=...|.....|-.+-+-||+..... + ...+...++.+.+++++.+=
T Consensus 63 --la~~~~A~~WV~~nV~~y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL 125 (316)
T 3em5_A 63 --LTNPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGL 125 (316)
T ss_dssp --HTSHHHHHHHHHHHTGGGTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred --ccCHHHHHHHHHHhhhhcCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCC
Confidence 00122222333333334545567888889999986432 2 67888999999999998874
|
| >3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A | Back alignment and structure |
|---|
Probab=80.60 E-value=52 Score=34.69 Aligned_cols=141 Identities=13% Similarity=0.054 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHHHCCCEEEEEcCCC-CCCC-CCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH---HhcCCC----eEE
Q 009475 266 SSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQ-NGNEHSATRDGFQEWGDSNVADTVAVIDFLAA---RYANRP----SLA 336 (534)
Q Consensus 266 ~l~~ld~~v~~a~~~Gl~VIlDlH~~-pG~q-ng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~---ryk~~~----~vl 336 (534)
.++.+++.+.++.++|=-|.|..|.. |... +-++.++.......=.......+...++.||+ .+++.. .|+
T Consensus 90 ~~~~i~~~i~~~~~rGGIvTlsWH~~np~tg~~~~dts~~~~~~ilpGg~~~~~y~~~l~~iA~~l~~Lk~~~g~gvPVl 169 (475)
T 3tp4_A 90 NIALFADYIRKADAIGGVNTVGAGVENFVTGGSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDGTLIPIV 169 (475)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEESGGGSTTSTTCC---CHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSCBCCEE
T ss_pred cHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCcccCCHHHHHHhcCCCchhHHHHHHHHHHHHHHHhhccccCCCceEE
Confidence 56778888889999999999999973 1100 00010100000000000122355566666665 555421 244
Q ss_pred EEEeccCCCCCC-------CChHHHHHHHHHHHHHHHhc-CCceEEEE-eCCC-CCCChhhhhcccCCCceE-EEEEeec
Q 009475 337 AIELINEPLAPG-------VALDTLKSYYKAGYDAVRKY-TSTAYVIM-SNRL-GPADHKELLSFASGLSRV-VIDVHYY 405 (534)
Q Consensus 337 g~eL~NEP~~~~-------~~~~~~~~~~~~~~~aIR~~-~p~~~Iiv-~~~~-~~~~~~~~~~~~~~~~nv-v~d~H~Y 405 (534)
|-+..|..+.= .+++.++++++.+++++|+. +-+.++.+ ++.- .+.+...+....++++.| ++.+=.|
T Consensus 170 -~Rp~HEmnG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwspn~~~~~~~~~~~~~YPGDdyVDiVG~D~Y 248 (475)
T 3tp4_A 170 -FRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLGLDTY 248 (475)
T ss_dssp -EEEEECCCSSSCCCHHHHHSHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEECCEEE
T ss_pred -EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCccchhhcCCCCCeEEEEEEecc
Confidence 78899988631 14678999999999999964 44555555 3211 112233444444455443 6666777
Q ss_pred cc
Q 009475 406 NL 407 (534)
Q Consensus 406 ~~ 407 (534)
..
T Consensus 249 ~~ 250 (475)
T 3tp4_A 249 DS 250 (475)
T ss_dssp ES
T ss_pred CC
Confidence 54
|
| >2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* | Back alignment and structure |
|---|
Probab=80.26 E-value=34 Score=33.39 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhc--CCCeEEEEEeccCCC
Q 009475 268 KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYA--NRPSLAAIELINEPL 345 (534)
Q Consensus 268 ~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk--~~~~vlg~eL~NEP~ 345 (534)
..+.+.++.+.+.|-.++|..| |...+-... ..| .. .+.++.+|+..+ +.| |+ +-+..|..
T Consensus 49 ~~~~~~~~~~~~~G~i~~isw~--P~~~~~~~i---~~G------~~----d~~i~~~A~~l~~~g~p-V~-~R~~hE~n 111 (283)
T 2v3g_A 49 SWVRPYADAVYNNGSILMITWE--PWEYNTVDI---KNG------KA----DAYITRMAQDMKAYGKE-IW-LRPLHEAN 111 (283)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE--CTTCCHHHH---HTT------TT----HHHHHHHHHHHHHHCSC-EE-EEESCCTT
T ss_pred hHHHHHHHHHHhCCCEEEEEeC--CCCCCHHHh---cCC------ch----HHHHHHHHHHHHhcCCc-EE-EEeccccC
Confidence 4456777888999999999999 321000000 001 11 122333333332 455 44 88999998
Q ss_pred CC------C-----CChHHHHHHHHHHHHHHHhcCCceEEEE
Q 009475 346 AP------G-----VALDTLKSYYKAGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 346 ~~------~-----~~~~~~~~~~~~~~~aIR~~~p~~~Iiv 376 (534)
+. . .+++.+++.++.+++++|+.+.++++.+
T Consensus 112 G~Wf~Wg~~~~~~~~~p~~y~~~wr~~~~~~r~~g~~n~~~v 153 (283)
T 2v3g_A 112 GDWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWV 153 (283)
T ss_dssp SSSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEB
T ss_pred CCcccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 62 1 2688999999999999999866666665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 534 | ||||
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 9e-65 | |
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 6e-05 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 2e-63 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 2e-04 | |
| d1ceoa_ | 340 | c.1.8.3 (A:) Endoglucanase CelC {Clostridium therm | 4e-37 | |
| d1vjza_ | 325 | c.1.8.3 (A:) Endoglucanase homologue TM1752 {Therm | 4e-24 | |
| d1edga_ | 380 | c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellu | 7e-22 | |
| d1h1na_ | 305 | c.1.8.3 (A:) Endocellulase EngI {Thermoascus auran | 6e-21 | |
| d1ecea_ | 358 | c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellul | 2e-17 | |
| d1ur4a_ | 387 | c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus lichen | 2e-16 | |
| d2c0ha1 | 350 | c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue | 3e-14 | |
| d1g01a_ | 357 | c.1.8.3 (A:) Alkaline cellulase K catalytic domain | 6e-14 | |
| d1dfca3 | 123 | b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens | 1e-12 | |
| d1dfca1 | 133 | b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens | 3e-11 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 3e-10 | |
| d1qnra_ | 344 | c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T | 3e-10 | |
| d7a3ha_ | 300 | c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradh | 3e-10 | |
| d1wkya2 | 297 | c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JA | 1e-09 | |
| d1egza_ | 291 | c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysant | 1e-09 | |
| d1bqca_ | 302 | c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca | 1e-09 | |
| d1rh9a1 | 370 | c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper | 2e-09 | |
| d1hcda_ | 118 | b.42.5.2 (A:) Histidine-rich actin-binding protein | 2e-08 | |
| d1tvna1 | 293 | c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalter | 1e-07 | |
| d1uuqa_ | 410 | c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta | 2e-07 | |
| d1foba_ | 334 | c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergi | 5e-06 | |
| d1dfca4 | 111 | b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens | 1e-05 | |
| d1hjsa_ | 332 | c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heter | 7e-05 | |
| d2vzsa5 | 339 | c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato | 1e-04 |
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 214 bits (545), Expect = 9e-65
Identities = 92/351 (26%), Positives = 150/351 (42%), Gaps = 33/351 (9%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY G D A LQ HW ++ ++DF ++S G N VRIP+G+W
Sbjct: 50 EYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVS 109
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 323
G LD A WA +KV VDLH A GSQNG ++S RD ++ DSN+A T+ V++
Sbjct: 110 GLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLN 169
Query: 324 FLAARYAN---RPSLAAIELINEPLAPGVALDT-LKSYYKAGYDAVRKY-TSTAYVIMSN 378
++ +Y+ + IELINEPL P + +D Y Y+ +R S +I+ +
Sbjct: 170 YILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHD 229
Query: 379 RLGPAD-HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTT 437
P + + ++ G V ID H+Y +F+++ ++ ++I L
Sbjct: 230 AFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVL----- 284
Query: 438 SNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVK-------------- 483
+ G+ + C + + + G W
Sbjct: 285 NESHWIVCGEFAAALTDCIK----WLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAY 340
Query: 484 --DASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 531
D K++ +R+ AQLD + GW W +K E + W + ++ NG
Sbjct: 341 WSDERKENTRRYVEAQLDAF-EMRGGWIIWCYKTESSLEWDAQRLMFNGLF 390
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.9 bits (100), Expect = 6e-05
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 26 QNADIKLPLRAVNLGNWLVTEGWMKPSRFDDIPNKDLLDGTQ 67
+ + P+R VN+G WL+ E ++ PS F+ D D
Sbjct: 5 DHGSLGEPIRGVNIGGWLLLEPYITPSLFEAFRTNDDNDEGI 46
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 210 bits (535), Expect = 2e-63
Identities = 104/341 (30%), Positives = 163/341 (47%), Gaps = 20/341 (5%)
Query: 204 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 263
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 45 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 103
Query: 264 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 323
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 104 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 163
Query: 324 FLAARYANRPS---LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 380
+ +Y + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 164 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 223
Query: 381 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 439
+ L+ A G VV+D H+Y +FS N+ +I N G
Sbjct: 224 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNW-----GWDAKKE 278
Query: 440 GPLTFVGKSVTSALICKR-----CTQIRIRKRNLWLNFVGEWTCEWNVK---DASKQDYQ 491
G+ + C + R ++G ++ D K D +
Sbjct: 279 SHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTR 338
Query: 492 RFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 531
R+ AQLD + T GW +W+ K E A WS + + NG
Sbjct: 339 RYIEAQLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNGLF 378
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 33 PLRAVNLGNWLVTEGWMKPSRFDDIPNKDLLDGTQV 68
+R VNLG W V E +M PS F+ N + G V
Sbjct: 8 VIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPV 43
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Length = 340 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Score = 138 bits (347), Expect = 4e-37
Identities = 52/311 (16%), Positives = 114/311 (36%), Gaps = 19/311 (6%)
Query: 214 DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNA 273
+ ++H+D++IT++D + ++ G + VR+P + I + +D
Sbjct: 15 SQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRC 74
Query: 274 FDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP 333
+W +KY + +++D+H APG + + ++T + V + FLA RY N
Sbjct: 75 LEWCKKYNLGLVLDMHHAPGYRFQDFKTST----LFEDPNQQKRFVDIWRFLAKRYINER 130
Query: 334 SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFAS 393
A EL+N+ + P A+R+ ST ++ + + +
Sbjct: 131 EHIAFELLNQVVEPDS--TRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLADI 188
Query: 394 GLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQR----ASDLGAVTTSNGPLTFVGKSV 449
+V + H+YN F + ++ N + N P +
Sbjct: 189 DDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMEL 248
Query: 450 TSALICKRCTQIRIRKRNLWLN------FVGEWTCEWNVKDASKQDYQRFANAQLDVYGR 503
+ + K + ++ + + GE+ + A + ++ + +
Sbjct: 249 NNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGV---IAIADLESRIKWHEDYISLLEE 305
Query: 504 ATFGWAYWAHK 514
G A W +K
Sbjct: 306 YDIGGAVWNYK 316
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Score = 100 bits (250), Expect = 4e-24
Identities = 47/299 (15%), Positives = 90/299 (30%), Gaps = 22/299 (7%)
Query: 219 VLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAE 278
+EDF +++ N VRIP+ + +D P + +D W E
Sbjct: 12 AFSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGE 71
Query: 279 KYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAI 338
KYG+ + + LH APG E + + + + A + +
Sbjct: 72 KYGIHICISLHRAPGYSVNKEVEEKTNLW-KDETAQEAFIHHWSFIARRYKGISSTHLSF 130
Query: 339 ELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 395
LINEP P ++++ S K +RK +I+ + + +
Sbjct: 131 NLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIII----DGLGYGNIPVDDLTI 186
Query: 396 SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALIC 455
V Y FS + D+ + + N +
Sbjct: 187 ENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWN-----------REKLL 235
Query: 456 KRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 514
+ ++ F GE ++ L+++ G+A W +
Sbjct: 236 EHYLTWIKLRQKGIEVFCGEMGAYNK---TPHDVVLKWLEDLLEIFKTLNIGFALWNFR 291
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Score = 95.4 bits (236), Expect = 7e-22
Identities = 46/330 (13%), Positives = 90/330 (27%), Gaps = 56/330 (16%)
Query: 225 DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV 284
T + + G N VRIPV W + ++ + V
Sbjct: 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSG-SDYKISDVWMNRVQEVVNYCIDNKMYV 117
Query: 285 IVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEP 344
I++ H G S+ ++ S+ +V +AAR+AN E +NEP
Sbjct: 118 ILNTHHDVDKVKGYFPSS------QYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEP 171
Query: 345 LAPG---------------VALDTLKSYYKAGYDAVRKY---------TSTAYVIMSNRL 380
G +++ + + + VR YV +
Sbjct: 172 RLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGA 231
Query: 381 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG 440
+ + +++++ VH Y ++ + N + D VT
Sbjct: 232 TNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLA-MADGGTNAWNINDSKDQSEVTWFMD 290
Query: 441 PLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDV 500
+ S + +GE ++ +Y + AQ
Sbjct: 291 NIYNKYTSRGIPV------------------IIGECGAVDKNNLKTRVEYMSYYVAQAKA 332
Query: 501 YGRATFGWAYWAHKCEA------NHWSLKW 524
G W + S ++
Sbjct: 333 RGILCILWDNNNFSGTGELFGFFDRRSCQF 362
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Score = 91.4 bits (226), Expect = 6e-21
Identities = 35/243 (14%), Positives = 74/243 (30%), Gaps = 26/243 (10%)
Query: 211 FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVL 270
FG P V + + L S G+N R+P + L
Sbjct: 16 FGSQNLPGVEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADL 74
Query: 271 DNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYA 330
+ + G +VD H + S+ +D +A+++A
Sbjct: 75 IATVNAITQKGAYAVVDPH-------------NYGRYYNSIISSPSDFETFWKTVASQFA 121
Query: 331 NRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM-------SNRLGPA 383
+ P + + NE + + +A D +R +T+ I
Sbjct: 122 SNPLV-IFDTDNEYHDMDQ--TLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTN 178
Query: 384 DHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT 443
+ + S +++ ++H Y + +G + + +R + +NG
Sbjct: 179 VNDNMKSLTDPSDKIIYEMHQYLDS--DGSGTSATCVSSTIGQERITSATQWLRANGKKG 236
Query: 444 FVG 446
+G
Sbjct: 237 IIG 239
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Length = 358 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Score = 81.3 bits (199), Expect = 2e-17
Identities = 48/337 (14%), Positives = 92/337 (27%), Gaps = 66/337 (19%)
Query: 208 TNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS 267
N FG + V+ W + S G N +R+P I T P
Sbjct: 26 INWFGFETCNYVVHGLWSRDY-RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQM 84
Query: 268 ----------KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVAD 317
+V+D +A + G+++I+D H S + A
Sbjct: 85 NQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQ--------SALWYTSSVSEAT 136
Query: 318 TVAVIDFLAARYANRPSLAAIELINEPLAP-----GVALDTLKSYYKAGYDAVRKYTSTA 372
++ + LA RY P++ +L NEP P G + + +AV
Sbjct: 137 WISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNL 196
Query: 373 YVIMSNRLGPADH-----------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI 421
+ + + + +R+V H Y +
Sbjct: 197 LIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFP 256
Query: 422 DYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWN 481
+ + + G + N ++G E+
Sbjct: 257 NNMPGIWNKNWGYLFNQNIAPVWLG----------------------------EFGTTLQ 288
Query: 482 VKDAS--KQDYQRFANAQLDVYGRATFGWAYWAHKCE 516
+ ++ YG +F W +W+ +
Sbjct: 289 STTDQTWLKTLVQYLRPTAQ-YGADSFQWTFWSWNPD 324
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Length = 387 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Score = 78.7 bits (193), Expect = 2e-16
Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 5/189 (2%)
Query: 223 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 282
+ +S + FK L G+N VR+ + + + A G+
Sbjct: 34 YNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGM 93
Query: 283 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVA-VIDFLAARYANRPSLAAIELI 341
K++ D H + + + A + + L A A + +++
Sbjct: 94 KLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVG 153
Query: 342 NEP---LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRV 398
NE LA + + AG AVR+ S V + P A L R
Sbjct: 154 NETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFT-NPETSGRYAWIAETLHRH 212
Query: 399 VIDVHYYNL 407
+D +
Sbjct: 213 HVDYDVFAS 221
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Score = 72.1 bits (175), Expect = 3e-14
Identities = 31/332 (9%), Positives = 84/332 (25%), Gaps = 19/332 (5%)
Query: 201 LRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-- 258
L G Q + D Q + + S+G N+VR+ + + P
Sbjct: 18 LSGANQAWVNYARDFGH--NQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDN 75
Query: 259 ---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNV 315
+ A+++ + + L Q+ + S +
Sbjct: 76 NGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLNGLMVDTRKLQSYI 135
Query: 316 ADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 375
+ +A N +L +++NEP + ++ + +
Sbjct: 136 DHALK---PMANALKNEKALGGWDIMNEP-------EGEIKPGESSSEPCFDTRHLSGSG 185
Query: 376 MSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAV 435
+E+ F + + + +V + + + + +N +
Sbjct: 186 AGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVK 245
Query: 436 TTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGE--WTCEWNVKDASKQDYQRF 493
T V + K + + + E+N + + +
Sbjct: 246 AGGKQSGTLSFYQVHTYDWQNHFGNESPFKHSFSNFRLKKPMVIGEFNQEHGAGMSSESM 305
Query: 494 ANAQLDVYGRATFGWAYWAHKCEANHWSLKWM 525
+ W+ ++ +
Sbjct: 306 FEWAYTKGYSGAWTWSRTDVSWNNQLRGMQHL 337
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Score = 71.1 bits (173), Expect = 6e-14
Identities = 40/293 (13%), Positives = 89/293 (30%), Gaps = 42/293 (14%)
Query: 224 WDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 282
+ + + F LS++ G N +R+ + T P+ ++ + A ++ +
Sbjct: 48 FGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-----DLVYEGIELAFEHDM 102
Query: 283 KVIVDLH-AAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 341
VIVD H APG + +S D F+E ++ ++ AN PS
Sbjct: 103 YVIVDWHVHAPGDPRADVYSGAYDFFEEI--ADHYKDHPKNHYIIWELANEPSPNNNGGP 160
Query: 342 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 401
+ +K Y + + +R+ ++ + + ++
Sbjct: 161 GLT-NDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWSQRPDLSADNPIDA-ENIMYS 218
Query: 402 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQI 461
VH+Y + + + +++ + +
Sbjct: 219 VHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAV------------------- 259
Query: 462 RIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 514
F EW + + Y A+ L+ + WA W+
Sbjct: 260 ----------FATEWG--TSQANGDGGPYFDEADVWLNFLNKHNISWANWSLT 300
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 123 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.6 bits (152), Expect = 1e-12
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 67 QVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNET-FYNFRVNNKQFIGLE 125
QV + ++ ++ G + AN+ + ETF+L +T FR + ++ L
Sbjct: 3 QVVLQA-ANERNVSTRQGMD--LSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLT 59
Query: 126 NQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS 182
G G+ + +++ S F I +D R+ L ASNG F+ + +L A +
Sbjct: 60 ATG---GVQSTASSKNASCYFDIEWRDR---RITLRASNGKFVTSKKNGQLAASVET 110
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 133 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.2 bits (143), Expect = 3e-11
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Query: 77 KYIAAESGGGTIVVANRTSASGWETFRLWRVNE----TFYNFRVNNKQFIGLENQGQGNG 132
KY+ AE+ G V A+ +S + + L + + R + +++ + G
Sbjct: 15 KYLTAEAFGFK-VNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGN--- 70
Query: 133 LVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSS 184
+ G F IV D S ++ + +E RL+ + S
Sbjct: 71 VTCEREVPGPDCRFLIV-AHDDGRWSLQSEAHRRYFGG-TEDRLSCFAQTVS 120
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Score = 59.7 bits (143), Expect = 3e-10
Identities = 42/313 (13%), Positives = 74/313 (23%), Gaps = 19/313 (6%)
Query: 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 281
+HW ED + + G++ VRI W +P P + G LD A G
Sbjct: 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGW----LDEAIATLAAEG 64
Query: 282 VKVIVDLHAAPGSQ--------------NGNEHSATRDGFQEWGDSNVAD-TVAVIDFLA 326
+KV++ A + G + + ++ LA
Sbjct: 65 LKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLA 124
Query: 327 ARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHK 386
RY ++A + NE +A + T + +
Sbjct: 125 ERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQ 184
Query: 387 ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 446
SFA + ++ Q + Q F+G
Sbjct: 185 RYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKFVTHNFMG 244
Query: 447 KSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATF 506
+ L F K + A R
Sbjct: 245 FFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYRGVG 304
Query: 507 GWAYWAHKCEANH 519
+W + +
Sbjct: 305 RGRFWVMEQQPGP 317
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Score = 59.2 bits (142), Expect = 3e-10
Identities = 42/223 (18%), Positives = 80/223 (35%), Gaps = 31/223 (13%)
Query: 223 HWDSYIT-----DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS---------- 267
+W S++T D F +SS+G+ VR+ + P+P + + S
Sbjct: 27 YWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGA 86
Query: 268 ---KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN----VADTVA 320
+ LD AE++ +K+I+ G G
Sbjct: 87 DGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRK 146
Query: 321 VIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM---- 376
+ + +RYAN ++ A EL NEP G + D + + + V+ S V +
Sbjct: 147 YVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEG 206
Query: 377 -----SNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNG 414
+ P + E FA + +D ++L+ +++
Sbjct: 207 LGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGT 249
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Score = 59.1 bits (142), Expect = 3e-10
Identities = 44/302 (14%), Positives = 82/302 (27%), Gaps = 69/302 (22%)
Query: 223 HWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 281
+ ++ E K+L + GIN R + P + + A + A
Sbjct: 36 WYGQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVK-----EKVKEAVEAAIDLD 90
Query: 282 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 341
+ VI+D H + + D ++ Y + P++ E+
Sbjct: 91 IYVIIDWHILSD---------------NDPNIYKEEAKDFFDEMSELYGDYPNV-IYEIA 134
Query: 342 NEPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVI 400
NEP V + +K Y + +R +I+ D V+
Sbjct: 135 NEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMY 194
Query: 401 DVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQ 460
H+Y +G N++ +DY +Q
Sbjct: 195 AFHFY----AGTHGQNLRDQVDYALDQG-------------------------------- 218
Query: 461 IRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHW 520
FV EW + + A +D WA W+ +
Sbjct: 219 --------AAIFVSEWG--TSAATGDGGVFLDEAQVWIDFMDERNLSWANWSLTHKDESS 268
Query: 521 SL 522
+
Sbjct: 269 AA 270
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Score = 57.2 bits (137), Expect = 1e-09
Identities = 25/198 (12%), Positives = 52/198 (26%), Gaps = 30/198 (15%)
Query: 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEK 279
W + +++ G N VRI + + + + N AE
Sbjct: 25 HGHAWYKDQATTAIEGIANTGANTVRIVLSD--------GGQWTKDDIQTVRNLISLAED 76
Query: 280 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIE 339
+ ++++H A G + + D + E + + I
Sbjct: 77 NNLVAVLEVHDATGYDSIASLNRAVDYWIEM---------------RSALIGKEDTVIIN 121
Query: 340 LINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFAS 393
+ NE YK +R +++ D+ + A
Sbjct: 122 IANEWFGSWDG-AAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNAD 180
Query: 394 GLSRVVIDVHYYNLFSNN 411
+ +H Y N
Sbjct: 181 PQRNTMFSIHMYEYAGGN 198
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Score = 57.1 bits (137), Expect = 1e-09
Identities = 42/303 (13%), Positives = 85/303 (28%), Gaps = 74/303 (24%)
Query: 225 DSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 283
+ + T + L + + VR +G + G+ ++ D A +
Sbjct: 36 EKFYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPA---GNKAKVERVVDAAIANDMY 92
Query: 284 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 343
I+ H ++N ++ + +A +Y N+P+ E+ NE
Sbjct: 93 AIIGWH------------------SHSAENNRSEAIRFFQEMARKYGNKPN-VIYEIYNE 133
Query: 344 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 403
PL +T+K Y +A A+R +I+ + E + +H
Sbjct: 134 PLQV-SWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYTLH 192
Query: 404 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRI 463
+Y +G +++ N
Sbjct: 193 FY----AGTHGESLRNKARQALN------------------------------------- 211
Query: 464 RKRNLWLNFVGEWTCEWNVKDASKQD--YQRFANAQLDVYGRATFGWAYWAHKCEANHWS 521
N + + EW +A Q +A + A WA + S
Sbjct: 212 -------NGIALFVTEWGTVNADGNGGVNQTETDAWVTFMRDNNISNANWALNDKNEGAS 264
Query: 522 LKW 524
+
Sbjct: 265 TYY 267
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Score = 57.2 bits (137), Expect = 1e-09
Identities = 25/194 (12%), Positives = 51/194 (26%), Gaps = 29/194 (14%)
Query: 220 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEK 279
+W T F + S+G N VR+ + + P + N ++
Sbjct: 26 HPHNWYPQHTQ-AFADIKSHGANTVRVVLSNGVRWSKNGPSD--------VANVISLCKQ 76
Query: 280 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIE 339
+ ++++H G + S W L + I
Sbjct: 77 NRLICMLEVHDTTGYGEQSGASTLDQAVDYW------------IELKSVLQGEEDYVLIN 124
Query: 340 LINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS-------F 391
+ NEP + + A +R +++ D +
Sbjct: 125 IGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYA 184
Query: 392 ASGLSRVVIDVHYY 405
+ V +H Y
Sbjct: 185 SDPTGNTVFSIHMY 198
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Score = 57.4 bits (137), Expect = 2e-09
Identities = 31/176 (17%), Positives = 56/176 (31%), Gaps = 21/176 (11%)
Query: 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--KVLDNAFDWAEK 279
D F+ S +N R + P P V + LD A+K
Sbjct: 34 DPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKK 93
Query: 280 YGVKVIVDLHAAPGSQNG----NEHSATRDGFQEWGDSNVADTVAVIDFLA--------- 326
YG+ +I+ L + G E + R D + + +
Sbjct: 94 YGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRV 153
Query: 327 -----ARYANRPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYTSTAYVIM 376
Y + P++ + ELINEP P + T +++ ++ S + +
Sbjct: 154 NTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEI 209
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Score = 50.6 bits (121), Expect = 2e-08
Identities = 11/114 (9%), Positives = 37/114 (32%), Gaps = 13/114 (11%)
Query: 77 KYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAV 136
+++AE V + F + + + +++ + + Q +
Sbjct: 12 HFLSAEGEA---VKTHHGHHDHHTHFHVENHGGK-VALKTHCGKYLSIGDHKQ---VYLS 64
Query: 137 SNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRL--TADYGS-SSWDD 187
+ G F + G +V + + +I A + + +++++
Sbjct: 65 HHLHGDHSLFHLEHHGG---KVSIKGHHHHYISADHHGHVSTKEHHDHDTTFEE 115
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Score = 51.4 bits (122), Expect = 1e-07
Identities = 30/200 (15%), Positives = 62/200 (31%), Gaps = 22/200 (11%)
Query: 225 DSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 283
+ + T E + +R +G + G+ LD + A +
Sbjct: 36 EKFYTAETVAKAKTEFNATLIRAAIGHG-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMY 94
Query: 284 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 343
VI+D H+ ++ A V + +A +Y ++ E+ NE
Sbjct: 95 VIIDFHSHE------------------AHTDQATAVRFFEDVATKYGQYDNV-IYEIYNE 135
Query: 344 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 403
PL ++ +K Y + D +R +++ D + + +H
Sbjct: 136 PLQIS-WVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLH 194
Query: 404 YYNLFSNNFNGLNVQQNIDY 423
+Y Q +D
Sbjct: 195 FYAGTHGQSYRNKAQTALDN 214
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Score = 50.5 bits (119), Expect = 2e-07
Identities = 29/237 (12%), Positives = 69/237 (29%), Gaps = 42/237 (17%)
Query: 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--------KVLDNA 273
+ D ++ L + G+N +R+ + + KP V + LD
Sbjct: 36 EVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYL 95
Query: 274 FDWAEKYGVKVIVDLHAAPGSQNG-NEHSATRDGFQEWGDSNVADTVAVIDFLAARY--- 329
K + V++ + G ++ A +G + + A + A+ Y
Sbjct: 96 LVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSE 155
Query: 330 -------------------------ANRPSLAAIELINEPLAP-----GVALDTLKSYYK 359
+ ++ + +L NEP +
Sbjct: 156 KAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVH 215
Query: 360 AGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLN 416
A ++ + V + ++ F + ID Y+++ N++ +
Sbjct: 216 AAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFD 272
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Length = 334 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Score = 46.2 bits (109), Expect = 5e-06
Identities = 25/218 (11%), Positives = 61/218 (27%), Gaps = 25/218 (11%)
Query: 229 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 288
T L+ GIN++R V W +P+ + G+ + +DL
Sbjct: 29 TQALETILADAGINSIRQRV-W---VNPSDGS----YDLDYNLELAKRVKAAGMSLYLDL 80
Query: 289 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVA-VIDFLAARYANRPSLAAIELINEPLAP 347
H + + ++ + T G+ + + + +A I I +
Sbjct: 81 HLSDTWADPSDQT-TPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRA 139
Query: 348 GVAL--------DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSF-------A 392
G+ + + +G V+ + L + ++
Sbjct: 140 GLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETVLAT 199
Query: 393 SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRAS 430
L D + + + + N +++
Sbjct: 200 GELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQST 237
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (99), Expect = 1e-05
Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 14/105 (13%)
Query: 78 YIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVS 137
+I GT + ANR S ++ F+L N+ YN + + ++ + + AV+
Sbjct: 12 FIGCRKVTGT-LDANR---SSYDVFQL-EFNDGAYNIKDSTGKYWTVGSDS------AVT 60
Query: 138 NTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS 182
++ F D G +++ L A +
Sbjct: 61 SSGDTPVDFFFEFCDY---NKVAIKVGGRYLKGDHAGVLKASAET 102
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Length = 332 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Score = 42.6 bits (99), Expect = 7e-05
Identities = 22/204 (10%), Positives = 54/204 (26%), Gaps = 18/204 (8%)
Query: 229 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 288
L++NG+N VR V W +P + A+ G+ V +D
Sbjct: 29 AQPLENILAANGVNTVRQRV--W--VNPADGN----YNLDYNIAIAKRAKAAGLGVYIDF 80
Query: 289 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE----- 343
H + + + + + + +D + + NE
Sbjct: 81 HYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGL 140
Query: 344 --PLAPGVALDTLKSYYKAGYDAVRKY-TSTAYVIMSNRLGPADHKELLSFASGL--SRV 398
P + + ++ S IM + D + + +
Sbjct: 141 LWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGT 200
Query: 399 VIDVHYYNLFSNNFNGLNVQQNID 422
+ + + + + + +
Sbjct: 201 LELSDFDMMGVSFYPFYSSSATLS 224
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 41.8 bits (97), Expect = 1e-04
Identities = 27/169 (15%), Positives = 50/169 (29%), Gaps = 27/169 (15%)
Query: 210 GFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKV 269
G+ PD + + + K++ + G+N VR +P
Sbjct: 27 GYTPDLFLRWNETAAA-----DKLKYVLNLGLNTVR----LEGHIEP------------- 64
Query: 270 LDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARY 329
D FD A+ GV + + + W +S+ A + A R
Sbjct: 65 -DEFFDIADDLGVLTMPGWECCDK---WEGQVNGEEKGEPWVESDYPIAKASMFSEAERL 120
Query: 330 ANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378
+ PS+ + + ++ KA D + A S
Sbjct: 121 RDHPSVISFHIGSDFAPDRRIEQGYLDAMKA-ADFLLPVIPAASARPSP 168
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 534 | |||
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 100.0 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 100.0 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 100.0 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 100.0 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 100.0 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 100.0 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 99.97 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 99.97 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 99.89 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 99.88 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 99.87 | |
| d1dfca3 | 123 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 99.81 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 99.8 | |
| d1dfca1 | 133 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.76 | |
| d1hcda_ | 118 | Histidine-rich actin-binding protein (hisactophili | 99.68 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 99.66 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 99.64 | |
| d1hcda_ | 118 | Histidine-rich actin-binding protein (hisactophili | 99.56 | |
| d1dfca1 | 133 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.46 | |
| d1dfca3 | 123 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.43 | |
| d1dfca4 | 111 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.36 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 99.34 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.3 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.08 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 98.98 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 98.86 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 98.85 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 98.8 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 98.78 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 98.77 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 98.7 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 98.68 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 98.66 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 98.65 | |
| d1dfca4 | 111 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 98.63 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 98.6 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 98.58 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 98.55 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 98.54 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 98.46 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 98.4 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 98.39 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 98.39 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 98.34 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 98.34 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 98.18 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 98.15 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 98.11 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 98.01 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 97.87 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 97.64 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 97.58 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 97.37 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 97.22 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 97.22 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 97.13 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 97.09 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 96.8 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 96.76 | |
| d1dfca2 | 119 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 96.71 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 95.84 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 95.82 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 95.71 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 95.47 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 95.41 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 95.38 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 95.36 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 95.27 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 95.26 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 95.18 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 95.09 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 94.9 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 94.86 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 94.67 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 94.64 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 94.49 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 94.48 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 94.28 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 94.26 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 94.13 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 93.91 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 93.72 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 93.69 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 93.68 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 93.63 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 93.57 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 93.53 | |
| d2v3ga1 | 273 | Endoglucanase H N-terminal domain {Clostridium the | 93.49 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 93.44 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 93.43 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 92.93 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 92.44 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 92.09 | |
| d2cyga1 | 312 | Plant beta-glucanases {Banana (Musa acuminata), 1, | 91.79 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 91.71 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 91.56 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 91.5 | |
| d1dfca2 | 119 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 91.45 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 91.28 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 83.47 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 81.08 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 80.21 |
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=4.7e-63 Score=521.01 Aligned_cols=324 Identities=31% Similarity=0.552 Sum_probs=268.5
Q ss_pred ccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCC
Q 009475 202 RGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 281 (534)
Q Consensus 202 ~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G 281 (534)
.+|+++++.+|.++++++++.||++|||++||+.||++|||+|||||+||.+..+ +++++.++.+++||++|++|+++|
T Consensus 43 ~~e~~~~~~~g~~~~~~~~~~h~~~~it~~D~~~i~~~G~N~VRiPv~~~~~~~~-~~~~~~~~~~~~ld~~i~~a~~~g 121 (394)
T d2pb1a1 43 VDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYWAFQLL-DNDPYVQGQVQYLEKALGWARKNN 121 (394)
T ss_dssp CSHHHHHHHHCHHHHHHHHHHHHHHSSCHHHHHHHHHTTCCEEEEEEEGGGTCCC-TTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHhChHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEEEecHHHhcCC-CCCccchhHHHHHHHHHHHHHHCC
Confidence 4688899999999999999999999999999999999999999999999977543 456788889999999999999999
Q ss_pred CEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCC---eEEEEEeccCCCCCCCChHHHHHH
Q 009475 282 VKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRP---SLAAIELINEPLAPGVALDTLKSY 357 (534)
Q Consensus 282 l~VIlDlH~~pG~qng~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~---~vlg~eL~NEP~~~~~~~~~~~~~ 357 (534)
|+||||||.+||++++.+++|... ...|. +.+.++++++|++||+||+++| .|++|||+|||.....+.+.|++|
T Consensus 122 l~VilDlH~~pg~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~ 200 (394)
T d2pb1a1 122 IRVWIDLHGAPGSQNGFDNSGLRD-SYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQF 200 (394)
T ss_dssp CEEEEEEEECTTCSSCCGGGSSTT-CCCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHH
T ss_pred cEEEEEeeccCCcccCcCCcCccC-ccccccHHHHHHHHHHHHHHHHHHccCCCCCceEEEeecccCCcccccHHHHHHH
Confidence 999999999999999999988653 34455 7889999999999999999876 699999999998755667899999
Q ss_pred HHHHHHHHHhcCCceEEEEeCCCCCC-ChhhhhcccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhh
Q 009475 358 YKAGYDAVRKYTSTAYVIMSNRLGPA-DHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 436 (534)
Q Consensus 358 ~~~~~~aIR~~~p~~~Iiv~~~~~~~-~~~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~ 436 (534)
|++++++||+++|+++|++++++.+. .+..++..+...+|+||++|+|.+|+......+..++|...|..... ..
T Consensus 201 ~~~~~~~IR~~~~~~~I~i~~~~~~~~~~~~~~~~~~~~~~vv~d~H~Y~~f~~~~~~~~~~~~i~~~~~~~~~----~~ 276 (394)
T d2pb1a1 201 FLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWD----AK 276 (394)
T ss_dssp HHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCCSEEEEEECCSCSSHHHHTCCHHHHHHHHHHHHHH----HH
T ss_pred HHHHHHHHHHhCCCCeEEEcCCCcchhhhhhhccCCCCCceEEEeeecccccCCccccCCHHHHHHhhhhhhhh----hh
Confidence 99999999999999999999876543 33444444456789999999999998777778888888888764332 11
Q ss_pred ccCCCeEEEeecccchhhhhhhhhh-----hhhhcccccccccccccccCCC---cccHHHHHHHHHHHHHHHhcCCCcE
Q 009475 437 TSNGPLTFVGKSVTSALICKRCTQI-----RIRKRNLWLNFVGEWTCEWNVK---DASKQDYQRFANAQLDVYGRATFGW 508 (534)
Q Consensus 437 ~~~gp~~~vgEws~a~tdc~~~~~~-----~~~~~~~~~~~vGEws~~~~~~---~a~~~~~~~~~~aq~~~~e~~~~GW 508 (534)
....+.++|||+.+.++|+..... +.......+..+|||++..... ...++.+++|+++|+++|+ .++||
T Consensus 277 -~~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~~~~~d~~~~~~~~~~~~r~~~~aQ~~~~e-~~~GW 354 (394)
T d2pb1a1 277 -KESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEAQLDAFE-YTGGW 354 (394)
T ss_dssp -TCSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCCHHHHHHHHHHHHHHHHHHH-TTTEE
T ss_pred -cccCcceeceecccchhhhhhhcccccccccccccCCCccccccccccChhhcCHHHHHHHHHHHHHHHHHHh-cCCcE
Confidence 223467889999999999875432 1122222345689998765432 2335678999999999998 57899
Q ss_pred EEEccccCC-CCCChhHHHHCCCccc
Q 009475 509 AYWAHKCEA-NHWSLKWMIENGYIKL 533 (534)
Q Consensus 509 ~fWt~K~~~-~~Ws~~~~v~~g~i~~ 533 (534)
+|||||+++ ++|||+.++++|+||.
T Consensus 355 ~fWt~K~~~~~~W~~~~~~~~G~iP~ 380 (394)
T d2pb1a1 355 VFWSWKTENAPEWSFQTLTYNGLFPQ 380 (394)
T ss_dssp EESCSCCSSCGGGCHHHHHHTTCSCS
T ss_pred EEeccccCCCCCCCHHHHHHCCCcCC
Confidence 999999987 8999999999999985
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.4e-62 Score=516.47 Aligned_cols=320 Identities=29% Similarity=0.509 Sum_probs=257.0
Q ss_pred ccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCC-CchHHHHHHHHHHHHHC
Q 009475 202 RGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKY 280 (534)
Q Consensus 202 ~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~-~~~l~~ld~~v~~a~~~ 280 (534)
.+|+++|+.+|.+.|+++++.||++||||+||+.||++|||+|||||+||.+... +..++. +..+++||++|+||+++
T Consensus 48 ~de~~~~~~~G~~~~~~~~~~h~~~~ite~D~~~i~~~G~N~VRiPi~~~~~~~~-~~~~~~~~~~~~~ld~~v~~a~~~ 126 (408)
T d1h4pa_ 48 VDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQIL-DDDPYVSGLQESYLDQAIGWARNN 126 (408)
T ss_dssp SSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGTCCC-TTCCCCCSSHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEEeccHHHhcCC-CCCCCcChhHHHHHHHHHHHHHHC
Confidence 4689999999999999999999999999999999999999999999999977543 334544 45899999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCC---CeEEEEEeccCCCCCCCC-hHHHH
Q 009475 281 GVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANR---PSLAAIELINEPLAPGVA-LDTLK 355 (534)
Q Consensus 281 Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~---~~vlg~eL~NEP~~~~~~-~~~~~ 355 (534)
||+||||||++||+||+.+|++... ...|. +.+.++++++|++||+||+++ +.|+||||+|||.....+ .+.++
T Consensus 127 gl~VilDlH~~pG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ia~r~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~ 205 (408)
T d1h4pa_ 127 SLKVWVDLHGAAGSQNGFDNSGLRD-SYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKN 205 (408)
T ss_dssp TCEEEEEEEECTTCSSCCGGGSSTT-CCCTTSHHHHHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHH
T ss_pred CCEEEEEeCCCCCCCcCCCCCCccc-ccccCCchHHHHHHHHHHHHHHHhcccccccceeeeecccCccccccchHHHHH
Confidence 9999999999999999999998764 44454 788999999999999999997 679999999999864433 35688
Q ss_pred HHHHHHHHHHHhcCC-ceEEEEeCCCCCCC-hhhhhcccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhh
Q 009475 356 SYYKAGYDAVRKYTS-TAYVIMSNRLGPAD-HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLG 433 (534)
Q Consensus 356 ~~~~~~~~aIR~~~p-~~~Iiv~~~~~~~~-~~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~ 433 (534)
.||++++++||+..+ +.+|+++++|.+.. +..++.......++++|+|+|.+|+......+.++++..+|.......
T Consensus 206 ~~~~~~~~~iR~~~~~~~~iv~~d~~~~~~~w~~~~~~~~~~~~vv~D~H~Y~~f~~~~~~~s~~~~i~~~~~~~~~~~- 284 (408)
T d1h4pa_ 206 DYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVL- 284 (408)
T ss_dssp HTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSEEEEEEECSCSSHHHHTCCHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHhccccCceEEEecCCCChhhhhhhcccCCCCceeEeeccceeeecCCcccCChhhhhhhhhhhhhhhh-
Confidence 899999999998654 56677788776533 355555445678999999999999876667888999998886554321
Q ss_pred hhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccC----------------CCcccHHHHHHHHHHH
Q 009475 434 AVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWN----------------VKDASKQDYQRFANAQ 497 (534)
Q Consensus 434 ~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~----------------~~~a~~~~~~~~~~aq 497 (534)
+ ...+.++|||+.+.++|+++...... ....+|||++... .+...++.+++|+++|
T Consensus 285 ---~-~~~p~~vGEws~a~td~~~~~n~~g~----~~~~~ge~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~r~~~eaQ 356 (408)
T d1h4pa_ 285 ---N-ESHWIVCGEFAAALTDCIKWLNSVGF----GARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQ 356 (408)
T ss_dssp ---T-CSSEEEEEEECSCSSSCSTTTTCTTC----CCTTBTCCCBTTBCCCBCSCCTTTTCGGGCCHHHHHHHHHHHHHH
T ss_pred ---c-ccCCcccccccccccchhhhcccccc----cceeecccccCCcCccccccccccCChhhCCHHHHHHHHHHHHHH
Confidence 2 23467889999999999876442111 1112566644211 0123356789999999
Q ss_pred HHHHhcCCCcEEEEccccCC-CCCChhHHHHCCCccc
Q 009475 498 LDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 533 (534)
Q Consensus 498 ~~~~e~~~~GW~fWt~K~~~-~~Ws~~~~v~~g~i~~ 533 (534)
+++|++ +.||+|||||+|+ ++|||+.++++|+||.
T Consensus 357 ~~~ye~-~~GW~fWt~K~e~~~~W~~~~~~~~g~iP~ 392 (408)
T d1h4pa_ 357 LDAFEM-RGGWIIWCYKTESSLEWDAQRLMFNGLFPQ 392 (408)
T ss_dssp HHHHTT-TTEEEESCSCCSSCSTTCHHHHHHTTSSCS
T ss_pred HHHHhc-CCCEEEeeeeCCCCCCCCHHHHHHCCCcCC
Confidence 999985 7899999999997 8999999999999985
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=3.4e-40 Score=338.76 Aligned_cols=275 Identities=20% Similarity=0.355 Sum_probs=198.2
Q ss_pred chhhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCC
Q 009475 216 APQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ 295 (534)
Q Consensus 216 a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~q 295 (534)
.....++||++|+||+||+.||++|||+|||||+|+.+....++..++++.+++||++|++|+++||+||||+|+.|+.+
T Consensus 17 ~~~~~~~h~~~~~te~d~~~i~~~G~n~vRlpi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~H~~p~~~ 96 (340)
T d1ceoa_ 17 YQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYR 96 (340)
T ss_dssp CSSCCHHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC--
T ss_pred ccccchhhhcccccHHHHHHHHHcCCCEEEeecCHHHhccCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEEecCCCccc
Confidence 34567889999999999999999999999999999877655555577888999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEE
Q 009475 296 NGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYV 374 (534)
Q Consensus 296 ng~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~I 374 (534)
++..+.+ ..|. +...++++++|+.||+|||++|.|++|||+|||+.+ +.+.|.+++++++++||+++|+++|
T Consensus 97 ~~~~~~~-----~~~~~~~~~~~~~~~~~~la~ry~~~p~v~~~el~NEP~~~--~~~~~~~~~~~~~~aIR~~dp~~~I 169 (340)
T d1ceoa_ 97 FQDFKTS-----TLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWL 169 (340)
T ss_dssp ------C-----CTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCE
T ss_pred ccccccc-----cccccHHHHHHHHHHHHHHHHhcCCCCcEEEEeeeeecCCC--CHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 6543322 2344 677889999999999999999999999999999863 4688999999999999999999999
Q ss_pred EEeC-CCCCCChhhhhcc-cCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeeccc--
Q 009475 375 IMSN-RLGPADHKELLSF-ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVT-- 450 (534)
Q Consensus 375 iv~~-~~~~~~~~~~~~~-~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~-- 450 (534)
++++ .|.+ ...+..+ +..++|++|++|+|.||. |+|+...+.-...... .+..+.+++..
T Consensus 170 ~v~g~~~~~--~~~~~~~~~~~d~nv~~~~H~Y~p~~--fth~~~~w~~~~~~~~------------~~~~~p~~~~~~~ 233 (340)
T d1ceoa_ 170 YIGGNNYNS--PDELKNLADIDDDYIVYNFHFYNPFF--FTHQKAHWSESAMAYN------------RTVKYPGQYEGIE 233 (340)
T ss_dssp EEECHHHHC--GGGGGGSCCCCCSSEEEEEEECCSHH--HHTTTCTTCHHHHHHC------------CCCCSSEECCSHH
T ss_pred EeCCCCcCC--chhhhcCCCCCCCCEEEEEeccCccc--cccccccccccccccc------------cccCCCccccccc
Confidence 9975 3332 2233332 246789999999999975 5555433321111000 00000111110
Q ss_pred ---------------------chhhhhhh-hhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCCcE
Q 009475 451 ---------------------SALICKRC-TQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGW 508 (534)
Q Consensus 451 ---------------------a~tdc~~~-~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW 508 (534)
....+... ......++.+.|+.+|||++.. .++.+...+|++++++++++.++||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Pv~igEFG~~~---~~~~~~~~~~~~~~~~~~~~~~igw 310 (340)
T d1ceoa_ 234 EFVKNNPKYSFMMELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIA---IADLESRIKWHEDYISLLEEYDIGG 310 (340)
T ss_dssp HHHHHCGGGGGGGGGTTCEESHHHHHHHHHHHHHHHHHHCCEEEEEEECCCT---TSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred cccccccccccccccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccCCcC---CCCHHHHHHHHHHHHHHHHHcCCcE
Confidence 00000000 0112234455678899998643 3455677889999999999999999
Q ss_pred EEEccccC
Q 009475 509 AYWAHKCE 516 (534)
Q Consensus 509 ~fWt~K~~ 516 (534)
+||+||..
T Consensus 311 ~~W~~~~~ 318 (340)
T d1ceoa_ 311 AVWNYKKM 318 (340)
T ss_dssp EESCSBST
T ss_pred EEeCCCCC
Confidence 99999974
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=4.6e-38 Score=322.30 Aligned_cols=309 Identities=17% Similarity=0.261 Sum_probs=208.2
Q ss_pred CceEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEE
Q 009475 165 GMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAV 244 (534)
Q Consensus 165 G~~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~V 244 (534)
+.||+++|..+|+++|.. |.+.|+|. .|.+.+....+.+|... .++||+.||++|+|+|
T Consensus 3 ~g~l~~~G~~~~d~~G~~----------~~l~GvN~----------~g~~~~~~~~~~~~~~~-~~~~~~~i~~~G~N~V 61 (358)
T d1ecea_ 3 GGYWHTSGREILDANNVP----------VRIAGINW----------FGFETCNYVVHGLWSRD-YRSMLDQIKSLGYNTI 61 (358)
T ss_dssp CSCCEEETTEEECTTSCE----------ECCEEEEC----------CCBTTTTCSCTTTTTSC-HHHHHHHHHHTTCCEE
T ss_pred CCeEEeeCCEEECCCCCE----------EEEEEEcc----------CcccccccccccCCccH-HHHHHHHHHHcCCCEE
Confidence 679999999999999874 55667663 45556666677777655 4899999999999999
Q ss_pred EeCcccccccCCCCC----------CCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC--h
Q 009475 245 RIPVGWWIANDPTPP----------KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG--D 312 (534)
Q Consensus 245 RIPv~~w~~~~~~~~----------~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~--~ 312 (534)
||||+||.+.+..++ ..+...++++||++|++|+++||+||||+|..+++++. ..|. +
T Consensus 62 Rlpv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~~~----------~~~~~~~ 131 (358)
T d1ecea_ 62 RLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQS----------ALWYTSS 131 (358)
T ss_dssp EEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCC----------SSSCCSS
T ss_pred EecCcHHHccCCCCCCCccccccChhhhchhHHHHHHHHHHHHHHCCCceeeecccccccCCC----------ccccCCh
Confidence 999999877543221 11234689999999999999999999999987654321 1122 4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-----CChHHHHHHHHHHHHHHHhcCCceEEEEeCC-CC-----
Q 009475 313 SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----VALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LG----- 381 (534)
Q Consensus 313 ~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~-~~----- 381 (534)
...++++++|+.||+||+++|.|++|||+|||.... .....+.+++++++++||+.+|+++|++++. +.
T Consensus 132 ~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~ 211 (358)
T d1ecea_ 132 VSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSY 211 (358)
T ss_dssp SCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEEC
T ss_pred HHHHHHHHHHHHHHHhhcCccceEeeeeccccccCCcCCccchhhhHHHHHHHHHHHHHhhCCCcEEEEeccccCccccc
Confidence 667899999999999999999999999999998642 2346789999999999999999999998641 10
Q ss_pred --CCChhhhh--c-ccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhh
Q 009475 382 --PADHKELL--S-FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICK 456 (534)
Q Consensus 382 --~~~~~~~~--~-~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~ 456 (534)
........ . ......|+||++|+|.++..........+..+.++..............+.+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~------------ 279 (358)
T d1ecea_ 212 WWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVW------------ 279 (358)
T ss_dssp STTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHTTSSCEE------------
T ss_pred cccccccchhhCCccCCccCceEEEeeecCCCcCCccccccchhhhhHHHHHHHHHHHHHHhcCCeEE------------
Confidence 00111111 1 113457999999999886522111111111111211111111111122222234
Q ss_pred hhhhhhhhhcccccccccccccccCCCcc--cHHHHHHHHHHHHHHHhcCCCcEEEEccccCC--------CCCChhHHH
Q 009475 457 RCTQIRIRKRNLWLNFVGEWTCEWNVKDA--SKQDYQRFANAQLDVYGRATFGWAYWAHKCEA--------NHWSLKWMI 526 (534)
Q Consensus 457 ~~~~~~~~~~~~~~~~vGEws~~~~~~~a--~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~--------~~Ws~~~~v 526 (534)
+|||++....... ..+.+++|++++.. +...++||+||+||.+. .+|+....+
T Consensus 280 ----------------igEfG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gw~~W~~k~~~~~~~G~~~~dw~~~~~~ 342 (358)
T d1ecea_ 280 ----------------LGEFGTTLQSTTDQTWLKTLVQYLRPTAQ-YGADSFQWTFWSWNPDSGDTGGILKDDWQTVDTV 342 (358)
T ss_dssp ----------------EEECCCCCCSHHHHHHHHHHHHHTCCHHH-HTTSSCEEEESCSCSCCTTTCCSBCTTSSSBCHH
T ss_pred ----------------EecCCCCCCCCChHHHHHHHHHHHHHHHH-hcccCceEEEEcCCCCCCCCcceecCCCCCCChh
Confidence 6777765432111 12234555555444 44578999999999864 369988888
Q ss_pred HCCCccc
Q 009475 527 ENGYIKL 533 (534)
Q Consensus 527 ~~g~i~~ 533 (534)
+.|+|+.
T Consensus 343 ~~~~i~~ 349 (358)
T d1ecea_ 343 KDGYLAP 349 (358)
T ss_dssp HHHHHGG
T ss_pred hhhhccc
Confidence 8888864
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=8.2e-36 Score=301.71 Aligned_cols=276 Identities=20% Similarity=0.293 Sum_probs=195.4
Q ss_pred hhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCC
Q 009475 218 QVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNG 297 (534)
Q Consensus 218 ~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng 297 (534)
..++.|+++++||+||+.||++|||+|||||+|+.+.+..++..++++.+++||++|++|.++||+||||+|+.||.+++
T Consensus 11 ~~~~~~~~~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~vildlH~~pg~~~~ 90 (325)
T d1vjza_ 11 EAFSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSVN 90 (325)
T ss_dssp TTSSTTCCCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEESC
T ss_pred hhhhhcccCCCCHHHHHHHHHcCCCEEEecccHHHccCCCCCCccCHHHHHHHHHHHHHHHHcCCcEEEeeccccccccC
Confidence 34677899999999999999999999999999998766555556678899999999999999999999999999998877
Q ss_pred CCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCC---CCChHHHHHHHHHHHHHHHhcCCce
Q 009475 298 NEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 298 ~~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~ 372 (534)
.+++. ....|. ....++++.+|+.||++|++++ .|++|||+|||... ....+.+.+++++++++||+++|++
T Consensus 91 ~~~~~---~~~~~~~~~~~~~~~~~w~~~a~~~~~~~~~i~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~ir~~~p~~ 167 (325)
T d1vjza_ 91 KEVEE---KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPER 167 (325)
T ss_dssp TTSCC---SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTC
T ss_pred ccccc---ccccccchhhHHHHHHHHHHHHHHhcccceeEEeeeccccCCCCccccchhhhhhhHHHHHHHHHhccCCCc
Confidence 65543 233455 6778889999999999999875 57999999999863 2456789999999999999999999
Q ss_pred EEEEeC-CCCCCChhhhhcccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEE--Eeecc
Q 009475 373 YVIMSN-RLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTF--VGKSV 449 (534)
Q Consensus 373 ~Iiv~~-~~~~~~~~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~--vgEws 449 (534)
+|++++ .|+ .........+++++++|.|.|+.. .+......-. . .......+... ...|.
T Consensus 168 ~v~v~g~~~~-----~~~~~~~~~~~~~~~~~~y~~~~~--~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~ 230 (325)
T d1vjza_ 168 LIIIDGLGYG-----NIPVDDLTIENTVQSCRGYIPFSV--THYKAEWVDS----K------DFPVPEWPNGWHFGEYWN 230 (325)
T ss_dssp CEEEECHHHH-----TBCCTTCCCSSEEEEEEECCSHHH--HSTTCTTTTC----T------TCCCCCSSSEEETTEEEC
T ss_pred EEEecCCccc-----cccCCcccccceeeeecccccccc--cccccccccc----c------ccccCCCCcccccccccc
Confidence 999975 221 111112456799999999998752 1111110000 0 00000001010 00011
Q ss_pred cchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccCC
Q 009475 450 TSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 517 (534)
Q Consensus 450 ~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~ 517 (534)
.+......+.-.+.. +.+.++.+|||++.. .++.+...+|++++++++++.++||+||+||...
T Consensus 231 ~~~~~~~~~~~~~~~-~~g~Pv~~gEfG~~~---~~~~~~~~~~~~~~l~~~~~~g~g~~~W~~~~~~ 294 (325)
T d1vjza_ 231 REKLLEHYLTWIKLR-QKGIEVFCGEMGAYN---KTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGPF 294 (325)
T ss_dssp HHHHHHHHHHHHGGG-GGTCEEEEEEECCCT---TSCHHHHHHHHHHHHHHHHHTTCEEEESCSBSTT
T ss_pred HHHHHHHHHHHHHHH-hcCCCEEEeeccCcC---CCCcHHHHHHHHHHHHHHHHcCCeEEEEcCCCCc
Confidence 110000001111111 223466799998632 4567788899999999999999999999999743
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=100.00 E-value=4.6e-35 Score=296.63 Aligned_cols=196 Identities=16% Similarity=0.159 Sum_probs=149.5
Q ss_pred CceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHH
Q 009475 191 SVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVL 270 (534)
Q Consensus 191 s~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~l 270 (534)
.+|.+.|+|..+.||. .......+..|+ +|+|++||+.||++|||+|||||+|+.+.+..++..+++..+++|
T Consensus 2 ~~~~~~Gvn~~G~e~~------~~~~~g~~~~~~-~~~t~~di~~l~~~G~N~VRlPv~~~~~~~~~~~~~~~~~~~~~l 74 (305)
T d1h1na_ 2 KVFQWFGSNESGAEFG------SQNLPGVEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADL 74 (305)
T ss_dssp CSSSEEEEEECCTTCS------TTSSSCCBTTTB-CCCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHH
T ss_pred CceeEEEEEccccccC------CCCCCCccCCCc-ccCCHHHHHHHHHCCCCEEEeeeeHHHhccCCCCCccCHHHHHHH
Confidence 3677888887777763 223333344555 588999999999999999999999987654444456778899999
Q ss_pred HHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC
Q 009475 271 DNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA 350 (534)
Q Consensus 271 d~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~ 350 (534)
+++|++|.++||+||||+|+.....+ .. ....+++.++|++||+||+++|.| +|||+|||+. ..
T Consensus 75 ~~~v~~a~~~gl~vIlD~H~~~~~~~----------~~---~~~~~~~~~~W~~ia~~~~~~~~v-~~el~NEP~~--~~ 138 (305)
T d1h1na_ 75 IATVNAITQKGAYAVVDPHNYGRYYN----------SI---ISSPSDFETFWKTVASQFASNPLV-IFDTDNEYHD--MD 138 (305)
T ss_dssp HHHHHHHHHTTCEEEEEECCTTEETT----------EE---CCCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCCS--SC
T ss_pred HHHHHHHHhcCCeEEEecccCCcccc----------cc---cccHHHHHHHHHHHHHHhCCCCee-EEEeccCCCC--cc
Confidence 99999999999999999998743211 00 134578999999999999999987 5999999984 56
Q ss_pred hHHHHHHHHHHHHHHHhcC-CceEEEEeC-CCCCC-Ch----hhhhcccCCCceEEEEEeecccCC
Q 009475 351 LDTLKSYYKAGYDAVRKYT-STAYVIMSN-RLGPA-DH----KELLSFASGLSRVVIDVHYYNLFS 409 (534)
Q Consensus 351 ~~~~~~~~~~~~~aIR~~~-p~~~Iiv~~-~~~~~-~~----~~~~~~~~~~~nvv~d~H~Y~~f~ 409 (534)
.+.|++++++++++||+++ ++++|+++. .|... .+ ..+..+..+.+|+||++|+|.++.
T Consensus 139 ~~~w~~~~~~~~~~IR~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~ 204 (305)
T d1h1na_ 139 QTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTNVNDNMKSLTDPSDKIIYEMHQYLDSD 204 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGBSTTHHHHSGGGGGCCCTTCCEEEEEEEECSTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCCcccccccccccCcccccCCCCCCCEEEEEEeCCCCC
Confidence 7899999999999999998 467777764 34321 11 112223345679999999998875
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=100.00 E-value=6.5e-34 Score=284.88 Aligned_cols=257 Identities=14% Similarity=0.199 Sum_probs=185.2
Q ss_pred EEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeC
Q 009475 168 IQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 247 (534)
Q Consensus 168 Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIP 247 (534)
|+++|++||+++|+. |.+.|++. | ..|....+++||+.||++|+|+||||
T Consensus 3 l~v~G~~ivd~nG~~----------~~l~Gvn~-----------~---------~~~~~~~~~~d~~~~~~~G~N~VRl~ 52 (297)
T d1wkya2 3 FYVSGTTLYDANGNP----------FVMRGINH-----------G---------HAWYKDQATTAIEGIANTGANTVRIV 52 (297)
T ss_dssp CEEETTEEECTTSCB----------CCCEEEEE-----------C---------GGGCGGGHHHHHHHHHTTTCSEEEEE
T ss_pred eEEECCEEECCCCCE----------EEEEEecc-----------C---------cccCchHHHHHHHHHHHCCCcEEEEe
Confidence 689999999998874 55667662 1 13445567999999999999999999
Q ss_pred cccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009475 248 VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 327 (534)
Q Consensus 248 v~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ 327 (534)
+.+ +.++.++.+++||++|++|.++||+||||+|..++.++ ....+.++++|+++++
T Consensus 53 ~~~--------~~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~~~~~~---------------~~~~~~~~~~w~~~a~ 109 (297)
T d1wkya2 53 LSD--------GGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDS---------------IASLNRAVDYWIEMRS 109 (297)
T ss_dssp ECC--------SSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCC---------------HHHHHHHHHHHHHTGG
T ss_pred ccC--------CCccCccHHHHHHHHHHHHHHCCCceEeeccccccccc---------------cccHHHHHHHHHHHHH
Confidence 964 23566778999999999999999999999998764321 3667889999999999
Q ss_pred HhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhc------ccCCCceEEEE
Q 009475 328 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS------FASGLSRVVID 401 (534)
Q Consensus 328 ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~------~~~~~~nvv~d 401 (534)
||+++|.|++|||+|||.. ....+.+.+++++++++||+++|+++|++++...+.+...+.. ...+..|++|+
T Consensus 110 ~~~~~p~v~~~~l~NEp~~-~~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~y~ 188 (297)
T d1wkya2 110 ALIGKEDTVIINIANEWFG-SWDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRNTMFS 188 (297)
T ss_dssp GTTTCTTTEEEECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHHHHHHHHHHHTCTTCCEEEE
T ss_pred HhcCCCCEEEEeccccccc-cchhhhhhhhhhhhHHHHHhcCCCceEEEecCCcccccchhhhccccccCCCcccceeEe
Confidence 9999999999999999986 4556889999999999999999999999975333233322211 12567899999
Q ss_pred EeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccC
Q 009475 402 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWN 481 (534)
Q Consensus 402 ~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~ 481 (534)
+|.|.++.. ..+.....+. ..... +.+++ ||||++...
T Consensus 189 ~H~Y~~~~~-----~~~~~~~~~~--------~~~~~-g~Pv~----------------------------vgEfG~~~~ 226 (297)
T d1wkya2 189 IHMYEYAGG-----NASQVRTNID--------RVLNQ-DLALV----------------------------IGEFGHRHT 226 (297)
T ss_dssp EEESTTTSS-----SHHHHHHHHH--------HHHTT-TCCEE----------------------------EEEECSEET
T ss_pred eccccCCCC-----ChhhHHHHHH--------HHhhc-CCCEE----------------------------EEeecccCC
Confidence 999976542 1111111111 11122 33355 455554321
Q ss_pred CCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccCCCCCChhHHHH
Q 009475 482 VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIE 527 (534)
Q Consensus 482 ~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~~~Ws~~~~v~ 527 (534)
..... .+++++.++++++||++|+||...+.|++..++.
T Consensus 227 ~~~~~-------~~~~~~~~~~~~~gw~~W~~~~~~~~~~~~~~~~ 265 (297)
T d1wkya2 227 NGDVD-------ESTIMSYSEQRGVGWLAWSWKGNGPEWEYLDLSN 265 (297)
T ss_dssp TEECC-------HHHHHHHHHHTTCEEEESCSSCCCGGGGGGCSBS
T ss_pred CCcHH-------HHHHHHHHHHcCCeEEEEEEECCCCCcccccccC
Confidence 11111 2345567778899999999998777777765444
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=100.00 E-value=6.6e-34 Score=286.64 Aligned_cols=194 Identities=16% Similarity=0.192 Sum_probs=149.1
Q ss_pred eEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHH-hCCccEEE
Q 009475 167 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAVR 245 (534)
Q Consensus 167 ~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~VR 245 (534)
.|+++|++||+++|.. |.++|+|.. | ...+..+++++||+.|+ ++|+|+||
T Consensus 8 ~l~v~g~~ivd~nG~~----------v~lrGvn~~----------~--------~~~~~~~~~~~~~~~l~~~~G~N~VR 59 (300)
T d7a3ha_ 8 QLSISNGELVNERGEQ----------VQLKGMSSH----------G--------LQWYGQFVNYESMKWLRDDWGINVFR 59 (300)
T ss_dssp SCEEETTEEECTTSCB----------CCCEEEEES----------C--------HHHHGGGCSHHHHHHHHHHTCCCEEE
T ss_pred eEEEeCCEEECCCCCE----------EEEEEEeCC----------C--------cccccccCCHHHHHHHHHHcCCCEEE
Confidence 7999999999999874 556676632 2 12345567899999986 69999999
Q ss_pred eCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHH
Q 009475 246 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFL 325 (534)
Q Consensus 246 IPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~l 325 (534)
+|+.... .....++..+++||++|++|.++||+||||+|..++... ..+.+++.++|+.|
T Consensus 60 ~~~~~~~-----~~~~~~~~~~~~ld~~v~~a~~~Gl~Vild~h~~~~~~~---------------~~~~~~~~~~w~~i 119 (300)
T d7a3ha_ 60 AAMYTSS-----GGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP---------------NIYKEEAKDFFDEM 119 (300)
T ss_dssp EEEESST-----TSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHHHHH
T ss_pred EeeEcCc-----cCcccCHHHHHHHHHHHHHHHHCCCEEEEeeeecCCCCC---------------hhhHHHHHHHHHHH
Confidence 9986421 112345678999999999999999999999998764311 24577899999999
Q ss_pred HHHhcCCCeEEEEEeccCCCCCCCC-hHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhcccCCCceEEEEEee
Q 009475 326 AARYANRPSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHY 404 (534)
Q Consensus 326 A~ryk~~~~vlg~eL~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~~~~~~nvv~d~H~ 404 (534)
|+|||++|.|+ |||+|||+..... .+.|+.++++++++||+++|+++|++++.....+.......+..++|++|++|.
T Consensus 120 a~ryk~~p~V~-~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~niv~~~H~ 198 (300)
T d7a3ha_ 120 SELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYAFHF 198 (300)
T ss_dssp HHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBHHHHHTSCCSCTTEEEEEEE
T ss_pred HHHhCCCCcce-eeeecccCCCCCCchhHHHHHHHHHHHHHHhcCCCCceeecCCCcccccchhhcCCCCCCCEEEEECC
Confidence 99999999985 9999999864432 468999999999999999999999997522112222222233567899999999
Q ss_pred cccCC
Q 009475 405 YNLFS 409 (534)
Q Consensus 405 Y~~f~ 409 (534)
|.++.
T Consensus 199 Y~~~~ 203 (300)
T d7a3ha_ 199 YAGTH 203 (300)
T ss_dssp ETTSC
T ss_pred ccCcC
Confidence 98754
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=1.1e-33 Score=291.62 Aligned_cols=196 Identities=15% Similarity=0.163 Sum_probs=146.1
Q ss_pred ceEEecccc-eeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHh-CCccE
Q 009475 166 MFIQAISET-RLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSS-NGINA 243 (534)
Q Consensus 166 ~~Lq~~g~~-~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~-~G~N~ 243 (534)
.+|+++|++ +|+++|.. |.++|++....+ .+..++++++++.|++ +|+|+
T Consensus 17 ~~l~~~G~~~l~d~~G~~----------v~lrGv~~~~~~------------------w~~~~~~~~~~~~l~~~~G~N~ 68 (357)
T d1g01a_ 17 QLVELNGQLTLAGEDGTP----------VQLRGMSTHGLQ------------------WFGEIVNENAFVALSNDWGSNM 68 (357)
T ss_dssp EEEEETTEEEEECTTSCB----------CCCEEEEESCHH------------------HHGGGCSHHHHHHHHTTSCCSE
T ss_pred CeEEEcCeEEEECCCCCE----------EEEEEEecCcch------------------hcccccCHHHHHHHHHhcCCCE
Confidence 678999986 66777764 556776632221 2456789999999985 89999
Q ss_pred EEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHH
Q 009475 244 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 323 (534)
Q Consensus 244 VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~ 323 (534)
||||+.+. + .+..+.+..+++||++|++|.++|||||||+|..++.... ....++++++|+
T Consensus 69 VRlp~~~~----~-~~~~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~~--------------~~~~~~~~~~W~ 129 (357)
T d1g01a_ 69 IRLAMYIG----E-NGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPR--------------ADVYSGAYDFFE 129 (357)
T ss_dssp EEEEEESS----S-SSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTT--------------SGGGTTHHHHHH
T ss_pred EEEeeeec----C-CCCccCHHHHHHHHHHHHHHHHCCCEEEEeecccCCCCCC--------------hhhhhhhHHHHH
Confidence 99999753 1 2235567799999999999999999999999988654210 134456789999
Q ss_pred HHHHHhcCCCe--EEEEEeccCCCCCCC----------ChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhcc
Q 009475 324 FLAARYANRPS--LAAIELINEPLAPGV----------ALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSF 391 (534)
Q Consensus 324 ~lA~ryk~~~~--vlg~eL~NEP~~~~~----------~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~ 391 (534)
+||+||+++|. +++|||+|||+.... ....|+.++++++++||+.+++++|+.++.|. .........
T Consensus 130 ~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~iiv~~~~w~-~~~~~~~~~ 208 (357)
T d1g01a_ 130 EIADHYKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWS-QRPDLSADN 208 (357)
T ss_dssp HHHHHHTTCTTGGGEEEECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHH-TCHHHHHHS
T ss_pred HHHHHHhcCcchHHHHHHHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhcCCceEEEecCCcc-ccchhcccc
Confidence 99999999874 678999999986421 13578999999999999998776555444443 233333333
Q ss_pred cCCCceEEEEEeecccCC
Q 009475 392 ASGLSRVVIDVHYYNLFS 409 (534)
Q Consensus 392 ~~~~~nvv~d~H~Y~~f~ 409 (534)
+..++|+||++|+|.++.
T Consensus 209 ~~~~~nvvys~H~Y~~~~ 226 (357)
T d1g01a_ 209 PIDAENIMYSVHFYTGSH 226 (357)
T ss_dssp CCSSSSEEEEEEEETTTS
T ss_pred cCCCCCEEEEEEEecCcc
Confidence 346789999999998764
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=2.2e-32 Score=284.64 Aligned_cols=252 Identities=17% Similarity=0.220 Sum_probs=177.1
Q ss_pred hhccC-CCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 221 QDHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 221 ~~hw~-~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
+.-|. .-+|+++|+.||++|||+|||||.|+.+.++. +..+++.+|++||++|++|.++|||||||+|+.++.+++..
T Consensus 54 e~~Wgnp~~t~~~i~~ik~~Gfn~vRiPv~w~~~~~~~-~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~ 132 (380)
T d1edga_ 54 ETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGS-DYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYF 132 (380)
T ss_dssp HHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEETT-TTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBC
T ss_pred CCccCCccccHHHHHHHHHcCCCEEEEcccHHHhcCCC-CCccCHHHHHHHHHHHHHHHHcCCEEEEecccCCCCCcccC
Confidence 45574 45899999999999999999999998766543 34567789999999999999999999999999988776543
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC---------------hHHHHHHHHHHHH
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA---------------LDTLKSYYKAGYD 363 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~---------------~~~~~~~~~~~~~ 363 (534)
.+ .|. ....+++.++|++||+|||+++.+++|||+|||+..... .+.++++++.+++
T Consensus 133 ~~-------~~~~~~~~~~~~~~W~qiA~~fkd~~~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 205 (380)
T d1edga_ 133 PS-------SQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVN 205 (380)
T ss_dssp SS-------GGGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-------ccCcHHHHHHHHHHHHHHHHhhcCCCceEEEeecccccccCCccccccccccccHHHHHHHHHHHHHHHHH
Confidence 22 233 567789999999999999999999999999999864211 2357899999999
Q ss_pred HHHhcC---CceEEEEeCCCCCCCh--hhhhcc----cCCCceEEEEEeecccCCCCCCCCchhhh------------HH
Q 009475 364 AVRKYT---STAYVIMSNRLGPADH--KELLSF----ASGLSRVVIDVHYYNLFSNNFNGLNVQQN------------ID 422 (534)
Q Consensus 364 aIR~~~---p~~~Iiv~~~~~~~~~--~~~~~~----~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~------------i~ 422 (534)
+||+++ ++++|++++...+.+. ...+.. ...++++++++|+|.||. |++....+. ..
T Consensus 206 ~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~d~~~~~~~li~s~H~Y~p~~--f~~~~~~~~~~~~~~~~~~~~~~ 283 (380)
T d1edga_ 206 TVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWN--FAGLAMADGGTNAWNINDSKDQS 283 (380)
T ss_dssp HHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHH--HHTSCGGGTCCCCCCTTCHHHHH
T ss_pred HHHHhccCCCceEEEeCCCccCCccccchhhcccccccCCCCCEEEEEeecCccc--cccccCCcCCCCccccCccccHH
Confidence 999986 5678888753322111 111111 134689999999999975 333221110 00
Q ss_pred HHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHh
Q 009475 423 YVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYG 502 (534)
Q Consensus 423 ~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e 502 (534)
.+........... .+.+.|++||||++.. ..+.+++.+|++.+++..+
T Consensus 284 ~i~~~~~~~~~~~-----------------------------~~~giPviiGEfG~~~---~~~~~~r~~~~~~~~~~a~ 331 (380)
T d1edga_ 284 EVTWFMDNIYNKY-----------------------------TSRGIPVIIGECGAVD---KNNLKTRVEYMSYYVAQAK 331 (380)
T ss_dssp HHHHHHHHHHHHT-----------------------------GGGTCCEEEEEECCCC---SSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----------------------------HhcCceEEEecccCcC---CCChHHHHHHHHHHHHHHH
Confidence 0100000000001 1122344589998754 2345667789999999999
Q ss_pred cCCCcEEEEccc
Q 009475 503 RATFGWAYWAHK 514 (534)
Q Consensus 503 ~~~~GW~fWt~K 514 (534)
+.+++|+||...
T Consensus 332 ~~gi~~~~Wdn~ 343 (380)
T d1edga_ 332 ARGILCILWDNN 343 (380)
T ss_dssp HTTCEEEECCCC
T ss_pred HcCCcEEEECCC
Confidence 999999999654
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=5.7e-33 Score=279.08 Aligned_cols=196 Identities=16% Similarity=0.195 Sum_probs=148.1
Q ss_pred eEEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHH-hCCccEEE
Q 009475 167 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAVR 245 (534)
Q Consensus 167 ~Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia-~~G~N~VR 245 (534)
.|+++|++|+ ++|+. |.++|++...++.. .+. ..++++++++.|+ ++|+|+||
T Consensus 4 ~l~v~G~~i~-~nG~~----------v~l~Gvn~~~~~~~----~~~-----------~~~~~~~~~~~l~~~~g~N~VR 57 (293)
T d1tvna1 4 KLTVSGNQIL-AGGEN----------TSFAGPSLFWSNTG----WGA-----------EKFYTAETVAKAKTEFNATLIR 57 (293)
T ss_dssp CEEEETTEEE-ETTEE----------CCCEEEEECCCCTT----SSC-----------GGGCSHHHHHHHHHHHCCSEEE
T ss_pred eEEEECCEEe-eCCcE----------EEEEEeecCCcCCC----cCC-----------CcccCHHHHHHHHHhCCCcEEE
Confidence 4788888887 77663 44667663222210 010 1357899999997 58999999
Q ss_pred eCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHH
Q 009475 246 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFL 325 (534)
Q Consensus 246 IPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~l 325 (534)
+|+++.... +...+...+..+++||++|++|+++|||||||+|.... ..+.+++.++|++|
T Consensus 58 ~~~~~~~~~-~~~~~~~~~~~l~~ld~~v~~a~~~gi~vild~h~~~~------------------~~~~~~~~~~w~~~ 118 (293)
T d1tvna1 58 AAIGHGTST-GGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEA------------------HTDQATAVRFFEDV 118 (293)
T ss_dssp EEEECCTTS-TTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG------------------GGCHHHHHHHHHHH
T ss_pred Eeccccccc-ccccccCcHHHHHHHHHHHHHHHHcCCEEEecCccCCC------------------cccHHHHHHHHHHH
Confidence 999976432 22333455678999999999999999999999997531 14568999999999
Q ss_pred HHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhhcccCCCceEEEEEeec
Q 009475 326 AARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYY 405 (534)
Q Consensus 326 A~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~~~~~~~~nvv~d~H~Y 405 (534)
|+|||++|.|+ |||+|||+.. .....|++++++++++||+++|+++|++++.....+.......+..+.|+||++|+|
T Consensus 119 a~r~k~~~~V~-~el~NEP~~~-~~~~~~~~~~~~~~~~Ir~~dp~~~I~v~g~~~~~~~~~~~~~~~~~~~~v~s~H~Y 196 (293)
T d1tvna1 119 ATKYGQYDNVI-YEIYNEPLQI-SWVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLHFY 196 (293)
T ss_dssp HHHHTTCTTEE-EECCSCCCSC-CTTTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTCHHHHHHSCCCSSSEEEEEEEE
T ss_pred HHHhCCCCeEE-EEEecccCCC-CcHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccccccchhhcCCccCCCceEEEEee
Confidence 99999999987 9999999864 345789999999999999999999999975221233333333445778999999999
Q ss_pred ccCC
Q 009475 406 NLFS 409 (534)
Q Consensus 406 ~~f~ 409 (534)
.++.
T Consensus 197 ~~~~ 200 (293)
T d1tvna1 197 AGTH 200 (293)
T ss_dssp TTTC
T ss_pred cccc
Confidence 8754
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=99.97 E-value=5.2e-32 Score=271.77 Aligned_cols=259 Identities=14% Similarity=0.192 Sum_probs=179.1
Q ss_pred EEecccceeecCCCCCCCCCCCCCceeeccccCcccceeeecccCCCcchhhhhhccCCCCCHHHHHHHHhCCccEEEeC
Q 009475 168 IQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 247 (534)
Q Consensus 168 Lq~~g~~~v~ad~~~~~W~~~~ps~F~~~~~~~~~~E~~~~~~~G~~~a~~~~~~hw~~~ite~d~~~ia~~G~N~VRIP 247 (534)
|+++|+.||+++|+. |.+.|++.... |.+ -.+++|+.||++|+|+||||
T Consensus 4 l~v~g~~i~d~nG~~----------~~lrGvn~~~~--------------------~~~-~~~~~~~~i~~~G~N~VRl~ 52 (302)
T d1bqca_ 4 LHVKNGRLYEANGQE----------FIIRGVSHPHN--------------------WYP-QHTQAFADIKSHGANTVRVV 52 (302)
T ss_dssp SEEETTEEECTTSCB----------CCCEEEEECTT--------------------TCT-TCTTHHHHHHHTTCSEEEEE
T ss_pred EEEeCCEEECCCCCE----------EEEEEeecCcc--------------------ccc-chHHHHHHHHhcCCCEEEEe
Confidence 689999999998874 55667763111 111 12468999999999999999
Q ss_pred cccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009475 248 VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 327 (534)
Q Consensus 248 v~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ 327 (534)
+.+. ..+....++.++++|++|.++||+||||+|..++.+.+.. +...+.+.++|+.||+
T Consensus 53 ~~~~--------~~~~~~~~~~~~~~v~~a~~~Gi~vildlh~~~~~~~~~~------------~~~~~~~~~~w~~ia~ 112 (302)
T d1bqca_ 53 LSNG--------VRWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSG------------ASTLDQAVDYWIELKS 112 (302)
T ss_dssp ECCS--------SSSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTSTT------------CCCHHHHHHHHHHTHH
T ss_pred cccc--------cccCcchHHHHHHHHHHHHHCCCEEEEEecccccccCCCc------------hHHHHHHHHHHHHHHH
Confidence 9753 2445568999999999999999999999998876543221 2557899999999999
Q ss_pred HhcCCCeEEEEEeccCCCCCC-CChHHHHHHHHHHHHHHHhcCCceEEEEeCCCCCCChhhhh-------cccCCCceEE
Q 009475 328 RYANRPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL-------SFASGLSRVV 399 (534)
Q Consensus 328 ryk~~~~vlg~eL~NEP~~~~-~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~~~~~~~~~~-------~~~~~~~nvv 399 (534)
||+++|.+++|||+|||.... ...+.+..++++++++||+.+|+++|+++....+.++.... ....+..|++
T Consensus 113 ~~~~~p~vv~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~d~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 192 (302)
T d1bqca_ 113 VLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNTV 192 (302)
T ss_dssp HHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCHHHHHHHHHHHTCTTCCEE
T ss_pred HhcCCCCEEEEeccccccCCCCcchhhhHHHHHHHHHHHHHcCCCcEEEEcCccccccchhhhccchhccccCCcccceE
Confidence 999999999999999998632 12356889999999999999999999998643333322111 1124668999
Q ss_pred EEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhhhhcccccccccccccc
Q 009475 400 IDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRIRKRNLWLNFVGEWTCE 479 (534)
Q Consensus 400 ~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~~~~~~~~~~vGEws~~ 479 (534)
|++|+|.++... ...+..++ .+... +.+++ ||||++.
T Consensus 193 y~~H~Y~~~~~~---~~~~~~~~-----------~~~~~-~~Pv~----------------------------vgEfG~~ 229 (302)
T d1bqca_ 193 FSIHMYGVYSQA---STITSYLE-----------HFVNA-GLPLI----------------------------IGEFGHD 229 (302)
T ss_dssp EEEEESGGGCSH---HHHHHHHH-----------HHHHH-TCCEE----------------------------EEEECCT
T ss_pred EEeeecCCCCCH---HHHHHHHH-----------Hhhhc-CCcEE----------------------------EEecCCc
Confidence 999999887521 11111111 11122 33455 4555443
Q ss_pred cCCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccCCCCCChhHHHH
Q 009475 480 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIE 527 (534)
Q Consensus 480 ~~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~~~Ws~~~~v~ 527 (534)
...... +.+++++.+++.++||++|+||.+...|++..+..
T Consensus 230 ~~~~~~-------~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~~ 270 (302)
T d1bqca_ 230 HSDGNP-------DEDTIMAEAERLKLGYIGWSWSGNGGGVEYLDMVY 270 (302)
T ss_dssp TSTTCC-------CHHHHHHHHHHHTCEEEESCSSCCCTTTGGGCSBG
T ss_pred CCCCcH-------HHHHHHHHHHHcCCeEEEEEecCCCCCcchhhccC
Confidence 211111 23444555666789999999998776666655444
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=99.97 E-value=6.5e-32 Score=271.18 Aligned_cols=225 Identities=19% Similarity=0.244 Sum_probs=157.9
Q ss_pred CCCCHHHHHHHH-hCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCC
Q 009475 226 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATR 304 (534)
Q Consensus 226 ~~ite~d~~~ia-~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~ 304 (534)
.++++++++.|+ ++|+|+||+|+.+.... ......+..+++||++|++|.++|||||||+|..++
T Consensus 37 ~~~~~~~~~~l~~~~G~N~vR~~~~~~~~~---~~~~~~~~~~~~ld~vv~~a~~~Giyvild~h~~~~----------- 102 (291)
T d1egza_ 37 KFYTADTVASLKKDWKSSIVRAAMGVQESG---GYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA----------- 102 (291)
T ss_dssp GGCSHHHHHHHHHTTCCCEEEEEEECSSTT---STTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG-----------
T ss_pred cccCHHHHHHHHHhcCCCEEEEeccccccC---CcccCcHHHHHHHHHHHHHHHHCCCeEeeeeccCCC-----------
Confidence 357899999998 68999999999764211 111122458999999999999999999999997642
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC-CCCCC
Q 009475 305 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPA 383 (534)
Q Consensus 305 ~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~~ 383 (534)
....+.+.++|+.||+|||++|.|+ |||+|||+.. ...+.++.++++++++||+++|+++|++++ .|. .
T Consensus 103 -------~~~~~~~~~~w~~la~ryk~~p~v~-~el~NEP~~~-~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~-~ 172 (291)
T d1egza_ 103 -------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQV-SWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWS-Q 172 (291)
T ss_dssp -------GGGHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCSC-CTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHH-T
T ss_pred -------cccHHHHHHHHHHHHHHhCCCccee-eeeccCcCCC-cchhhHHHHHHHHHHHHHhcCCCcEEEEecCCcc-c
Confidence 2457889999999999999999985 9999999963 345679999999999999999999999875 333 3
Q ss_pred ChhhhhcccCCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEeecccchhhhhhhhhhhh
Q 009475 384 DHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGKSVTSALICKRCTQIRI 463 (534)
Q Consensus 384 ~~~~~~~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vgEws~a~tdc~~~~~~~~ 463 (534)
+.......+..++|++|++|+|.++... ...+.+.. ... .+.+++
T Consensus 173 ~~~~~~~~~~~~~n~vys~H~Y~~~~~~----~~~~~~~~-----------~~~-~~~Pv~------------------- 217 (291)
T d1egza_ 173 NVDEASRDPINAKNIAYTLHFYAGTHGE----SLRNKARQ-----------ALN-NGIALF------------------- 217 (291)
T ss_dssp CHHHHHTSCCCSSSEEEEEEEETTTCCH----HHHHHHHH-----------HHH-TTCCEE-------------------
T ss_pred ccchhhhcccCCCcEEEEecccCCCCch----hHHHHHHH-----------HHH-cCCCeE-------------------
Confidence 3333333335678999999999886421 11111110 111 233456
Q ss_pred hhccccccccccccccc-CCCcccHHHHHHHHHHHHHHHhcCCCcEEEEccccCCCCCC
Q 009475 464 RKRNLWLNFVGEWTCEW-NVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWS 521 (534)
Q Consensus 464 ~~~~~~~~~vGEws~~~-~~~~a~~~~~~~~~~aq~~~~e~~~~GW~fWt~K~~~~~Ws 521 (534)
+|||+... ..... ....+++++++.+++.++||++|+||..+..|+
T Consensus 218 ---------vgEfG~~~~~~~~~---~~~~~~~~~~~~~~~~~i~w~~W~~~~~~~~~~ 264 (291)
T d1egza_ 218 ---------VTEWGTVNADGNGG---VNQTETDAWVTFMRDNNISNANWALNDKNEGAS 264 (291)
T ss_dssp ---------EEEEESSCTTSCSC---CCHHHHHHHHHHHHHTTCCEEEEEECCSSSTTC
T ss_pred ---------ecccCCcccCCCCC---cCHHHHHHHHHHHHHcCCeEEEEeeeCCCCCee
Confidence 44444321 00011 112355666788889999999999996444444
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=99.89 E-value=1.4e-22 Score=204.74 Aligned_cols=148 Identities=21% Similarity=0.253 Sum_probs=114.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCC-------------CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTP-------------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN 296 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~-------------~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qn 296 (534)
+++|+.|+++|+|+|||++......++.+ ...+.+..++.||+++++|+++||+||||+|..++...
T Consensus 39 ~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~~~~~~~ 118 (344)
T d1qnra_ 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYG 118 (344)
T ss_dssp HHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTS
T ss_pred HHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcccccCccccCHHHHHHHHHHHHHHHHcCCeeEeeccCCccccc
Confidence 78999999999999999875432222211 12245678999999999999999999999998765432
Q ss_pred CCC----CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCc
Q 009475 297 GNE----HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 371 (534)
Q Consensus 297 g~~----~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 371 (534)
+.. ..+. .....|. +..++.+.++|+.+++||+++|+|++|+|.|||.........+..++++++++||+.+|+
T Consensus 119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~d~~ 197 (344)
T d1qnra_ 119 GINAYVNAFGG-NATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSN 197 (344)
T ss_dssp HHHHHHHHHCS-CTTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCSS
T ss_pred ccccccccccc-ccccccCCHHHHHHHHHHHHHHHHHhCCCCceeeeccCCccCCCCCchhhhhHHHHHHHHHHHhhCCC
Confidence 210 0000 0111222 566788999999999999999999999999999876677788999999999999999999
Q ss_pred eEEEEeC
Q 009475 372 AYVIMSN 378 (534)
Q Consensus 372 ~~Iiv~~ 378 (534)
++|+++.
T Consensus 198 ~~v~~~~ 204 (344)
T d1qnra_ 198 HLVTLGD 204 (344)
T ss_dssp SEEECCC
T ss_pred CEEEEcc
Confidence 9999864
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=99.88 E-value=2.2e-22 Score=203.94 Aligned_cols=149 Identities=18% Similarity=0.201 Sum_probs=112.1
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCC--CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC-------C
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE-------H 300 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~-------~ 300 (534)
+++|+.||++|+|+|||++..+....+.+ +..+++..++.||++|++|.++||+||+|+|...+...+.+ .
T Consensus 42 ~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~ 121 (370)
T d1rh9a1 42 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQ 121 (370)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEECCccCccCcccCCCCCcccHHHHHHHHHHHHHHHHcCCEEEEecccccccccCCccccccccc
Confidence 78899999999999999875433222211 23466779999999999999999999999997654321100 0
Q ss_pred CC--CCCCCCCCC-hhhHHHHHHHHHHHHHH--------hcCCCeEEEEEeccCCCCC-CCChHHHHHHHHHHHHHHHhc
Q 009475 301 SA--TRDGFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKY 368 (534)
Q Consensus 301 sg--~~~g~~~W~-~~~~~~~~~~w~~lA~r--------yk~~~~vlg~eL~NEP~~~-~~~~~~~~~~~~~~~~aIR~~ 368 (534)
.+ .......|. +...+.+.+.|+.+++| |+++|.|+++|++|||... ..+.+.+.+++++++++||+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~ 201 (370)
T d1rh9a1 122 RGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSI 201 (370)
T ss_dssp TTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccCCHHHHHHHHHHHHHHHHhhhhhhHhhhcCCceeeeeccccccccCCccchHHHHHHHHHHHHHHHhh
Confidence 00 000111233 56677889999999987 5899999999999999763 245678999999999999999
Q ss_pred CCceEEEEeC
Q 009475 369 TSTAYVIMSN 378 (534)
Q Consensus 369 ~p~~~Iiv~~ 378 (534)
+|+++|+++.
T Consensus 202 dp~~~v~~~~ 211 (370)
T d1rh9a1 202 DSNHLLEIGL 211 (370)
T ss_dssp CCSSEEECCC
T ss_pred CCCCeEEEec
Confidence 9999999864
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=99.87 E-value=4.7e-22 Score=198.44 Aligned_cols=145 Identities=12% Similarity=0.068 Sum_probs=111.8
Q ss_pred CHHHHHHHHhCCccEEEeCcccccccCCC-----CCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPVGWWIANDPT-----PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 303 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~~w~~~~~~-----~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~ 303 (534)
+++||+.||++|+|+||||+.++....+. .+..+++..++++|++|+.|.++||+||||+|..++.+++..+.
T Consensus 44 ~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~vi~d~~~~~~~~~~~~~~-- 121 (350)
T d2c0ha1 44 FESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRL-- 121 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHHHH--
T ss_pred HHHHHHHHHHcCCCEEEECcccCccCCcccccCCCCCccChhhhHHHHHHHHHHHHCCCEEEEEeccccccCCCCccc--
Confidence 48999999999999999999775433221 11124567899999999999999999999999987654432110
Q ss_pred CCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC---------------------------CCChHHHH
Q 009475 304 RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP---------------------------GVALDTLK 355 (534)
Q Consensus 304 ~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~---------------------------~~~~~~~~ 355 (534)
....|. +...+.+.++|+.||+||+++|+|++|||+|||... ......+.
T Consensus 122 --~~~~~~~~~~~~~~~~~~~~~a~r~~~~psv~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (350)
T d2c0ha1 122 --NGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIG 199 (350)
T ss_dssp --HHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHH
T ss_pred --CcccCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEEEecccccccCccccccccccccchhcccccccccccccHHHHH
Confidence 001122 445677889999999999999999999999999731 11246788
Q ss_pred HHHHHHHHHHHhcCCceEEEEe
Q 009475 356 SYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 356 ~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
.+++.++.+||+.+|+++|.++
T Consensus 200 ~~~~~~~~~i~~~d~~~~v~~~ 221 (350)
T d2c0ha1 200 RFVNWQAAAIKEVDPGAMVTVG 221 (350)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHHHHHHHHHhCCCceEEec
Confidence 9999999999999999998875
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=2.4e-21 Score=169.39 Aligned_cols=110 Identities=25% Similarity=0.350 Sum_probs=94.2
Q ss_pred eeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecC-ceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCce
Q 009475 67 QVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNE-TFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSET 145 (534)
Q Consensus 67 ~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~-~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~Et 145 (534)
||.||+ .||||||||+|| .|+|||+.++.||+|+|+...+ ++++||++||+|++++.. + .|+|+++++++||+
T Consensus 3 qv~l~~-~ngkyvsa~~G~--~v~An~~~~~~~e~F~le~~~~~~~~~Lr~~~gkyl~~~~~--g-~v~a~~~~~~~~e~ 76 (123)
T d1dfca3 3 QVVLQA-ANERNVSTRQGM--DLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTAT--G-GVQSTASSKNASCY 76 (123)
T ss_dssp EEEEEC-TTSCEEEC---C--BCEEEECCCSGGGCEEEEECTTTCCEEEEETTTEEEEECTT--S-BEEEEESSCCGGGC
T ss_pred eEEEEe-cCCCEEEEcCCC--EEEecccccCCcceEEEEECCCCCEEEEEeCCCCEEEEcCC--C-cEEEccccCCCceE
Confidence 899998 699999999976 4999999999999999998664 689999999999999863 3 49999999999999
Q ss_pred EEEEEeCCCCceEEEEecCCceEEecccceeecCCCC-CCC
Q 009475 146 FQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS-SSW 185 (534)
Q Consensus 146 F~ivr~~~~~~~v~i~~~nG~~Lq~~g~~~v~ad~~~-~~W 185 (534)
|+|+..+ +++.|++.||+||+++....+.|+... +.|
T Consensus 77 F~~~~~~---g~~alra~nG~yl~a~~~G~l~a~~~~~g~~ 114 (123)
T d1dfca3 77 FDIEWRD---RRITLRASNGKFVTSKKNGQLAASVETAGDS 114 (123)
T ss_dssp BEEEEET---TEEEEECTTSSBCEECSSSBEESCCSSCCSS
T ss_pred EEEEEeC---CeEEEEeCCCCEEEeCCCCEEEEccCCCCCc
Confidence 9999873 369999999999999888888888766 444
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=99.81 E-value=1.9e-18 Score=179.22 Aligned_cols=176 Identities=16% Similarity=0.208 Sum_probs=120.3
Q ss_pred CCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009475 228 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 305 (534)
Q Consensus 228 ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~ 305 (534)
.+++.|+.||++|+|+||||| |+..... ...++.. ..++++++++++|+++||+||||+|..+....+ +...
T Consensus 39 ~~~d~~~~lk~~G~n~VRl~v-w~~~~~~-~~~~~~~g~~~l~~~~~~~~~a~~~Gl~v~ldlH~sd~wadp----~~q~ 112 (387)
T d1ur4a_ 39 KKQDIFKTLKEAGVNYVRVRI-WNDPYDA-NGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADP----AKQK 112 (387)
T ss_dssp CBCCHHHHHHHTTCCEEEEEE-CSCCBCT-TCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSS----SCCC
T ss_pred CcccHHHHHHHcCCCEEEeec-ccCCccc-ccCcCCCccccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcCC----CCCC
Confidence 456789999999999999999 5433222 2233433 369999999999999999999999987654321 2222
Q ss_pred CCCCCC----hhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCCC---CChHHHHHHHHHHHHHHHhcCCceEEEEe
Q 009475 306 GFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG---VALDTLKSYYKAGYDAVRKYTSTAYVIMS 377 (534)
Q Consensus 306 g~~~W~----~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~~---~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~ 377 (534)
....|. ....+...+..+.+.+++++.+ .+..+||.|||+... .+.+.+.+++++++++||+.+|+..|+++
T Consensus 113 ~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~ 192 (387)
T d1ur4a_ 113 APKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALH 192 (387)
T ss_dssp CCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CchhhhccchhHHHHHHHHHHHHHHHHHhhcCCCccEEEEecCCCcCccCcCCHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 334565 2233344445555666666554 466799999998632 36788999999999999999999988886
Q ss_pred C-CCCCCCh-hhhhcc--cCCCceEEEEEeecccCC
Q 009475 378 N-RLGPADH-KELLSF--ASGLSRVVIDVHYYNLFS 409 (534)
Q Consensus 378 ~-~~~~~~~-~~~~~~--~~~~~nvv~d~H~Y~~f~ 409 (534)
. ....... ..+.+. ....+..++.+|+|..|.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~w~ 228 (387)
T d1ur4a_ 193 FTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWH 228 (387)
T ss_dssp ECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTS
T ss_pred ccCccchHHHHHHHHHHHhcCCCcccccceeecccC
Confidence 3 2222221 222222 134567899999996654
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=99.80 E-value=1.3e-18 Score=177.26 Aligned_cols=178 Identities=11% Similarity=0.058 Sum_probs=121.9
Q ss_pred HHHHHHHHhCCccEEEeCcccccccC--------CCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC--
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIAND--------PTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE-- 299 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~--------~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~-- 299 (534)
+++|+.||++|+|+|||++.+-.... +..+..+++..++.+|+++++|+++||+||||+|..+....+..
T Consensus 44 ~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~ 123 (410)
T d1uuqa_ 44 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQY 123 (410)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHH
T ss_pred HHHHHHHHHCCCcEEEeCCcccccccccccCCCcccccccccHHHHHHHHHHHHHHHHcCCeeEEeccccccccCCcccc
Confidence 78999999999999999875422111 11223577788999999999999999999999998765432110
Q ss_pred ---CCCCCCCC--------------CCCC--hhhHHHHHHHHHHHHHH--------hcCCCeEEEEEeccCCCCCCC---
Q 009475 300 ---HSATRDGF--------------QEWG--DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPGV--- 349 (534)
Q Consensus 300 ---~sg~~~g~--------------~~W~--~~~~~~~~~~w~~lA~r--------yk~~~~vlg~eL~NEP~~~~~--- 349 (534)
..+..... ..|. +...+.+.+.|+.+++| |+++|.|++++|.|||.....
T Consensus 124 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~ 203 (410)
T d1uuqa_ 124 MAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTT 203 (410)
T ss_dssp HHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCC
T ss_pred cccccCCCcCccccccccccccccccccccCHHHHHHHHHHHHHHHHhhhhhhhHhhcCChhHhhhhhccccCCccCccc
Confidence 00000000 0111 44567788999999987 789999999999999986432
Q ss_pred --ChHHHHHHHHHHHHHHHhcCCceEEEEeC-CCCC--CChhhhhcccCCCceEEEEEeeccc
Q 009475 350 --ALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGP--ADHKELLSFASGLSRVVIDVHYYNL 407 (534)
Q Consensus 350 --~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~-~~~~--~~~~~~~~~~~~~~nvv~d~H~Y~~ 407 (534)
..+.+..+++.++++||..+|+++|.++. .... ................++++|+|..
T Consensus 204 ~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~h~Y~~ 266 (410)
T d1uuqa_ 204 AEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIR 266 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTT
T ss_pred ccchhhhhHHHHHHHhhhhhcCCCceEeecccccccccccccchhhhccCCccceEEeecCcc
Confidence 24678899999999999999999998863 1111 1111111111233456889999954
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.4e-19 Score=160.05 Aligned_cols=108 Identities=18% Similarity=0.206 Sum_probs=90.5
Q ss_pred ceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEec----CceEEEEeeCCcEEEeecCCCCceEEEeecCCC
Q 009475 66 TQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVN----ETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAG 141 (534)
Q Consensus 66 ~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~----~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~ 141 (534)
.++-||| .+||||+||.+|. .|+|||++++.||+|+|+.+. ++++.||++||+||+++.+ | .|+|++++|+
T Consensus 5 ~~~gl~~-~~gkYltAe~~G~-~v~a~~~~~~~~e~w~le~~~~~~~~~~v~Lrs~~Gkylsa~~~--g-~v~a~~~~~~ 79 (133)
T d1dfca1 5 IQFGLIN-CGNKYLTAEAFGF-KVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKD--G-NVTCEREVPG 79 (133)
T ss_dssp CEECEEC-TTSCBCEECSSSS-CEECCCSSCCTTTCEECC--------CCBCCBCTTSCEEEECTT--S-CEEEEESSCC
T ss_pred cEEeEEE-cCCcEEEEECCCC-EEEeeCCCCCCCcEEEEEEecCCCCCCEEEEEecCCCEEeeccC--c-ceEEcCCCCC
Confidence 4677998 5999999999885 599999999999999999764 4689999999999999964 3 4999999999
Q ss_pred CCceEEEEEeCCCCceEEEEe-cCCceEEecccceeecCCC
Q 009475 142 YSETFQIVRKDGDSSRVRLSA-SNGMFIQAISETRLTADYG 181 (534)
Q Consensus 142 ~~EtF~ivr~~~~~~~v~i~~-~nG~~Lq~~g~~~v~ad~~ 181 (534)
+||+|+++.++|+. +.+++ .||.||.+++.. +.|...
T Consensus 80 ~~E~F~~~~~~dG~--~~l~s~~nG~yl~~~~~~-l~a~~~ 117 (133)
T d1dfca1 80 PDCRFLIVAHDDGR--WSLQSEAHRRYFGGTEDR-LSCFAQ 117 (133)
T ss_dssp GGGCEECCBCSSSC--BCCEETTTCCEEEEETTE-EEEEES
T ss_pred CCcEEEEEECCCCE--EEEEEcCCCcEEEecCCc-eEEeCC
Confidence 99999999988764 78898 699999998776 455544
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.68 E-value=1.1e-16 Score=138.29 Aligned_cols=108 Identities=10% Similarity=0.204 Sum_probs=91.9
Q ss_pred eeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCceE
Q 009475 67 QVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETF 146 (534)
Q Consensus 67 ~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~EtF 146 (534)
++.||| .+||||.||.+ .+.++|...+.||.|.|... +++++||++||+|||+++. + .|+|++++|+.||+|
T Consensus 3 ~~~lrs-~~gkyL~a~~~---~v~~~~~~~~~~~~F~ve~~-~g~iaLks~~GkYlsa~~~--g-~l~~~~~~~~~~E~F 74 (118)
T d1hcda_ 3 NRAFKS-HHGHFLSAEGE---AVKTHHGHHDHHTHFHVENH-GGKVALKTHCGKYLSIGDH--K-QVYLSHHLHGDHSLF 74 (118)
T ss_dssp CSEEES-STTCEEEEETT---EEEEECSCSSCCCCCEEEEE-TTEEEEESSSSCEEEEEET--T-EEEEECCCSSSSSSB
T ss_pred cEEeEc-CCCcEEeecCC---ceEeeCCCCCCCceEEEEcC-CCEEEEEeCCCCEEEecCC--C-cEEEeccCCCCceEE
Confidence 678998 79999999955 37899999999999999876 6899999999999999974 3 599999999999999
Q ss_pred EEEEeCCCCceEEEEecCCceEEeccccee--ecCCCC-CCC
Q 009475 147 QIVRKDGDSSRVRLSASNGMFIQAISETRL--TADYGS-SSW 185 (534)
Q Consensus 147 ~ivr~~~~~~~v~i~~~nG~~Lq~~g~~~v--~ad~~~-~~W 185 (534)
+|++.+ .+|.|++.||+||+++....+ ++|... ++|
T Consensus 75 ~ie~~~---g~valrs~nGkylsa~~~g~v~~n~~~~~~~~W 113 (118)
T d1hcda_ 75 HLEHHG---GKVSIKGHHHHYISADHHGHVSTKEHHDHDTTF 113 (118)
T ss_dssp EEEEET---TEEEEECSTTCEEEECGGGCEEEESSCSSTTCB
T ss_pred EEEECC---CEEEEEeCCCCEEEEcCCCceeeEcCCCCCCCc
Confidence 999863 369999999999999755544 556655 567
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=99.66 E-value=3e-15 Score=150.05 Aligned_cols=245 Identities=14% Similarity=0.115 Sum_probs=148.1
Q ss_pred CHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009475 229 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 308 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~ 308 (534)
+++.++.||++|||+||||+ | .+|.++ ...+++++++++.|+++||+||||+|..|+.... +......
T Consensus 29 ~~~~~~~lk~~G~n~VRi~v-W---~~p~~g----~~~~~~~~~~v~~a~~~gl~vil~~h~~~~wa~~----~~~~~p~ 96 (332)
T d1hjsa_ 29 AQPLENILAANGVNTVRQRV-W---VNPADG----NYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADP----AHQTMPA 96 (332)
T ss_dssp BCCHHHHHHHTTCCEEEEEE-C---SSCTTC----TTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBT----TBCBCCT
T ss_pred cccHHHHHHHcCCCEEEeee-e---ecCCCC----ccCHHHHHHHHHHHHHCCCEEEEEecCCccccCc----cccCCCc
Confidence 46788889999999999998 4 355432 2369999999999999999999999998765321 1111223
Q ss_pred CCC---hhhHHHHHHHHHHHHHHhcCCCeE-EEEEeccCCCCC-------CCChHHHHHHHHHHHHHHHhcCC--ceEEE
Q 009475 309 EWG---DSNVADTVAVIDFLAARYANRPSL-AAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKYTS--TAYVI 375 (534)
Q Consensus 309 ~W~---~~~~~~~~~~w~~lA~ryk~~~~v-lg~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p--~~~Ii 375 (534)
.|. ....+...++|+.++++||+.... ..+++.|||... ....+.+.++++.++++||+.++ ...|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~~~~k~~~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~l~~~a~~av~~~~~~~~~~v~ 176 (332)
T d1hjsa_ 97 GWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIM 176 (332)
T ss_dssp TCCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHhcCCchhHhhhccccCCcccCccCCcchHHHHHHHHHHHHHHHHhhccCCCccee
Confidence 343 344567889999999999987654 446788887641 13456889999999999999764 33344
Q ss_pred EeCCCCCCChh-------hhhccc--CCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEe
Q 009475 376 MSNRLGPADHK-------ELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 446 (534)
Q Consensus 376 v~~~~~~~~~~-------~~~~~~--~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vg 446 (534)
+.... ..+.. .+.... ...+-.++.+|+|..+.. +.+.....+.+.. +....+.++++.
T Consensus 177 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~ig~~~Y~~~~~---~~~~~~~~~~~~~--------~~~~~g~~v~i~ 244 (332)
T d1hjsa_ 177 IHLDN-GWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSS---SATLSALKSSLDN--------MAKTWNKEIAVV 244 (332)
T ss_dssp EEESC-TTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCT---TCCHHHHHHHHHH--------HHHHHCCEEEEE
T ss_pred ecccC-cCchhhhhhHHHHHHhcCcccCCccceEeeeecCCCCC---CCCHHHHHHHHHH--------HHHHhCCceEEE
Confidence 43211 12221 111111 122457899999955431 1222222222211 111123345556
Q ss_pred ecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhc--CCCcEEEEc
Q 009475 447 KSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR--ATFGWAYWA 512 (534)
Q Consensus 447 Ews~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~--~~~GW~fWt 512 (534)
|..-.... ....+++.........+.+..++|++..+.+..+ .+.|.+||.
T Consensus 245 E~~~~~~~---------------~~~~~~~~~~~~~~~~s~~~Qa~~~~~~~~~~~~~~~g~G~~yW~ 297 (332)
T d1hjsa_ 245 ETNWPISC---------------PNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWE 297 (332)
T ss_dssp ECCCCSBC---------------SSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred Eecccccc---------------ccccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 64332110 0112333322222245677778888888877765 457899993
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=99.64 E-value=6.4e-15 Score=149.41 Aligned_cols=244 Identities=15% Similarity=0.184 Sum_probs=149.6
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++-++.||++|+|+|||+| | .+|.++ ...+++++++++.|+++||+|+||+|..+.... .+.......
T Consensus 30 ~d~~~~lk~~G~n~VRlrv--W--~~p~~g----~~~~~~~~~~~~~a~~~Gm~vll~~hysd~Wad----p~~q~~P~a 97 (334)
T d1foba_ 30 QALETILADAGINSIRQRV--W--VNPSDG----SYDLDYNLELAKRVKAAGMSLYLDLHLSDTWAD----PSDQTTPSG 97 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE--C--SCCTTC----TTCHHHHHHHHHHHHHTTCEEEEEECCSSSCCB----TTBCBCCTT
T ss_pred ccHHHHHHHcCCCEEEeee--e--eCCCCC----cCcHHHHHHHHHHHHHCCCEEEEEecCCCcccC----CCcCCCccc
Confidence 4567788999999999998 4 355432 237999999999999999999999998764321 122223345
Q ss_pred CC----hhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCC-------CCChHHHHHHHHHHHHHHHhcCCc--eEEE
Q 009475 310 WG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKYTST--AYVI 375 (534)
Q Consensus 310 W~----~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~--~~Ii 375 (534)
|. +...+.+.++++.++++|++.. .+..+++.|||... ..+.+.+.++.+.++++||+++|. ..|+
T Consensus 98 w~~~~~~~~~~~~~~~t~~v~~~~k~~~~~~~~vqIgNE~n~g~~w~~g~~~~~~~~a~ll~a~~~aVr~~~~~~~~~i~ 177 (334)
T d1foba_ 98 WSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIM 177 (334)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred ccccccccHHHHHHHHHHHHHHHHHhcCCCceEEEcccccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhhccccccee
Confidence 65 3456778899999999999875 35568999998742 235678999999999999999854 3444
Q ss_pred EeCCCCCCCh---hhh----hccc--CCCceEEEEEeecccCCCCCCCCchhhhHHHHHhhhhhhhhhhhccCCCeEEEe
Q 009475 376 MSNRLGPADH---KEL----LSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 446 (534)
Q Consensus 376 v~~~~~~~~~---~~~----~~~~--~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~gp~~~vg 446 (534)
++...+ .+. ..+ .... ...+-.++.+|+|..+... .+ ++.+... +..+.+..++.+++.
T Consensus 178 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~Dvig~syYp~w~~~---~~----l~~l~~~----l~~l~~~y~k~v~I~ 245 (334)
T d1foba_ 178 IHLDDG-WSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSAS---AT----LASLKTS----LANLQSTYDKPVVVV 245 (334)
T ss_dssp EEESCT-TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTT---CC----HHHHHHH----HHHHHHHHCCCEEEE
T ss_pred eecccC-CChhhhHHHHHHHHhcCCCCCCCcCeEEEecCCCCCCc---cc----HHHHHHH----HHHHHHHhCCceEEE
Confidence 442222 221 111 1111 1124469999999665421 12 2222211 112222223334455
Q ss_pred ecccchhhhhhhhhhhhhhcccccccccccccccCCCcccHHHHHHHHHHHHHHHhc--CCCcEEEEc
Q 009475 447 KSVTSALICKRCTQIRIRKRNLWLNFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR--ATFGWAYWA 512 (534)
Q Consensus 447 Ews~a~tdc~~~~~~~~~~~~~~~~~vGEws~~~~~~~a~~~~~~~~~~aq~~~~e~--~~~GW~fWt 512 (534)
|..-..+ | ++..++......--..+++..++|+.+++++-.. .+.|.+||.
T Consensus 246 Et~~~~t-~--------------~~~~~~~~~~~~~~p~s~~gQa~yl~~~~~~~~~~~~G~G~~YWe 298 (334)
T d1foba_ 246 ETNWPVS-C--------------PNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWE 298 (334)
T ss_dssp ECCCCSB-C--------------SSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred Eeccccc-C--------------CcccccccccccCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEeC
Confidence 6432211 0 0112222111111135678888999888877654 467999995
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.56 E-value=1.4e-15 Score=131.19 Aligned_cols=80 Identities=14% Similarity=0.160 Sum_probs=69.5
Q ss_pred ccceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCC
Q 009475 64 DGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYS 143 (534)
Q Consensus 64 ~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~ 143 (534)
.|.+|+||| .+|+||||+++| .|+|||++++.||+|++.+. +++++||+.||+||+++++| ...+.+++++++.|
T Consensus 39 ~~g~iaLks-~~GkYlsa~~~g--~l~~~~~~~~~~E~F~ie~~-~g~valrs~nGkylsa~~~g-~v~~n~~~~~~~~W 113 (118)
T d1hcda_ 39 HGGKVALKT-HCGKYLSIGDHK--QVYLSHHLHGDHSLFHLEHH-GGKVSIKGHHHHYISADHHG-HVSTKEHHDHDTTF 113 (118)
T ss_dssp ETTEEEEES-SSSCEEEEEETT--EEEEECCCSSSSSSBEEEEE-TTEEEEECSTTCEEEECGGG-CEEEESSCSSTTCB
T ss_pred CCCEEEEEe-CCCCEEEecCCC--cEEEeccCCCCceEEEEEEC-CCEEEEEeCCCCEEEEcCCC-ceeeEcCCCCCCCc
Confidence 356899999 699999999876 59999999999999999875 69999999999999999753 44567778888899
Q ss_pred ceEEE
Q 009475 144 ETFQI 148 (534)
Q Consensus 144 EtF~i 148 (534)
|+|.|
T Consensus 114 E~f~i 118 (118)
T d1hcda_ 114 EEIII 118 (118)
T ss_dssp EEECC
T ss_pred eeEEC
Confidence 99975
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.4e-14 Score=127.42 Aligned_cols=79 Identities=16% Similarity=0.300 Sum_probs=70.1
Q ss_pred cccceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEee-CCcEEEeecCCCCceEEEeecCCC
Q 009475 63 LDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAG 141 (534)
Q Consensus 63 ~~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~g~~~~~~a~~~~~~ 141 (534)
-++++|.||| .+|+|||++.+| .|+|||+++++||+|++....+++++||+. ||+||++++ + .|+|++.+++
T Consensus 48 ~~~~~v~Lrs-~~Gkylsa~~~g--~v~a~~~~~~~~E~F~~~~~~dG~~~l~s~~nG~yl~~~~---~-~l~a~~~~~~ 120 (133)
T d1dfca1 48 AGSAAVCLRS-HLGRYLAADKDG--NVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTE---D-RLSCFAQTVS 120 (133)
T ss_dssp ---CCBCCBC-TTSCEEEECTTS--CEEEEESSCCGGGCEECCBCSSSCBCCEETTTCCEEEEET---T-EEEEEESSCC
T ss_pred CCCCEEEEEe-cCCCEEeeccCc--ceEEcCCCCCCCcEEEEEECCCCEEEEEEcCCCcEEEecC---C-ceEEeCCCCC
Confidence 3678999998 589999999877 599999999999999999999999999995 999999985 3 3999999999
Q ss_pred CCceEEE
Q 009475 142 YSETFQI 148 (534)
Q Consensus 142 ~~EtF~i 148 (534)
++|.|.|
T Consensus 121 ~~e~f~v 127 (133)
T d1dfca1 121 PAEKWSV 127 (133)
T ss_dssp GGGCBEE
T ss_pred CCeeEEE
Confidence 9999986
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=9.5e-14 Score=120.47 Aligned_cols=79 Identities=25% Similarity=0.304 Sum_probs=70.4
Q ss_pred ccceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCC
Q 009475 64 DGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYS 143 (534)
Q Consensus 64 ~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~ 143 (534)
++..++||+ .+|||||++..| .|+|+|+++++||+|+|... +++++||+.||+||+++++ | .|.|++++|++|
T Consensus 42 ~~~~~~Lr~-~~gkyl~~~~~g--~v~a~~~~~~~~e~F~~~~~-~g~~alra~nG~yl~a~~~--G-~l~a~~~~~g~~ 114 (123)
T d1dfca3 42 DTKKCAFRT-HTGKYWTLTATG--GVQSTASSKNASCYFDIEWR-DRRITLRASNGKFVTSKKN--G-QLAASVETAGDS 114 (123)
T ss_dssp TTCCEEEEE-TTTEEEEECTTS--BEEEEESSCCGGGCBEEEEE-TTEEEEECTTSSBCEECSS--S-BEESCCSSCCSS
T ss_pred CCCEEEEEe-CCCCEEEEcCCC--cEEEccccCCCceEEEEEEe-CCeEEEEeCCCCEEEeCCC--C-EEEEccCCCCCc
Confidence 456899997 799999998765 59999999999999999875 6899999999999999874 3 599999999999
Q ss_pred ceEEEE
Q 009475 144 ETFQIV 149 (534)
Q Consensus 144 EtF~iv 149 (534)
|.|.|.
T Consensus 115 e~f~i~ 120 (123)
T d1dfca3 115 ELFLMK 120 (123)
T ss_dssp SEEEEE
T ss_pred eEEEEE
Confidence 999874
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=5.8e-13 Score=113.09 Aligned_cols=100 Identities=18% Similarity=0.305 Sum_probs=78.0
Q ss_pred eeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCceE
Q 009475 67 QVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETF 146 (534)
Q Consensus 67 ~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~EtF 146 (534)
+|-|| -.+| |||+..+++ .|.|||+ .||+|+|.. ++++++||+.||+|+++++. | .|++.+++ +|.|
T Consensus 3 ~lvLr-g~~G-fv~~~~~~~-~l~~Nr~---~~e~F~l~~-~~g~y~lr~~~gkyw~~~~d--G-~l~~~~~~---~~~F 69 (111)
T d1dfca4 3 IIVFR-GEHG-FIGCRKVTG-TLDANRS---SYDVFQLEF-NDGAYNIKDSTGKYWTVGSD--S-AVTSSGDT---PVDF 69 (111)
T ss_dssp SBCCE-ETTE-EEEECSSSC-BEEEEES---SCCCBEEEE-ETTEEEEECTTSCBCEECSS--C-BEESCCSS---CCCB
T ss_pred EEEEE-cccc-eEEecCCCC-eEEEcCC---CCcEEEEEE-cCCEEEEEcCCCCEEEEcCC--C-cEEeCCCC---CCCE
Confidence 45666 3455 777776655 5999994 699999965 67999999999999999864 3 47776654 5789
Q ss_pred EEEEeCCCCceEEEEecCCceEEecccceeecCCCC
Q 009475 147 QIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS 182 (534)
Q Consensus 147 ~ivr~~~~~~~v~i~~~nG~~Lq~~g~~~v~ad~~~ 182 (534)
+|....++ ++.|++ ||+||+++.+..+.|+...
T Consensus 70 ~le~~~~~--~~~~~a-nGkYL~~~~~G~L~A~~~~ 102 (111)
T d1dfca4 70 FFEFCDYN--KVAIKV-GGRYLKGDHAGVLKASAET 102 (111)
T ss_dssp EEEEEETT--EEEEEE-TTEEEEECGGGBEEEEESS
T ss_pred EEEEeCCC--EEEEcc-CCeEEEeCCCCeEEeCCCC
Confidence 88887553 688887 8999999988888888664
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=99.34 E-value=6.4e-12 Score=125.00 Aligned_cols=189 Identities=14% Similarity=0.096 Sum_probs=118.2
Q ss_pred cchhhhhhccCCCCCHHHHHHH-HhCCccEEEeCcccccccCC----CCCCCCCCc-hHHHHHHHHHHHHHCCCEEEEEc
Q 009475 215 KAPQVLQDHWDSYITDEDFKFL-SSNGINAVRIPVGWWIANDP----TPPKPFVGG-SSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 215 ~a~~~~~~hw~~~ite~d~~~i-a~~G~N~VRIPv~~w~~~~~----~~~~~~~~~-~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+...++..| .+++..+ +++|++.||++-.+...... ....+-.+. .+..+|++|+.|+++||++++.|
T Consensus 13 ~~~~~l~~d~-----~~~l~~~~~~lG~~~vR~~~~~~~~~~~~~~~~~~~~~~~~yd~~~~D~~~~~~~~~g~~~~~~l 87 (346)
T d1uhva2 13 RLGLALQKEY-----IETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFTYIDRIFDSFLEIGIRPFVEI 87 (346)
T ss_dssp CGGGGGBHHH-----HHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEECCHHHHHHHHHHHHHTCEECEEE
T ss_pred CcccccCHHH-----HHHHHHHHHhcCCCEEEccCcccccCccccccccCccCCcccChHhHHHHHHHHHHcCCCeEEEE
Confidence 3445555555 4555555 67999999997432111000 000000001 36889999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCC-----CeEEEEEeccCCCCCC----CChHHHHHHHH
Q 009475 289 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANR-----PSLAAIELINEPLAPG----VALDTLKSYYK 359 (534)
Q Consensus 289 H~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~-----~~vlg~eL~NEP~~~~----~~~~~~~~~~~ 359 (534)
+..|+..................+...+.+.++++.+++||++. +.+..||+.|||.... .+.+.+.++++
T Consensus 88 ~~~p~~~~~~~~~~~~~~~~~~~p~~~~~w~~~v~~~~~~y~~~~~~~~~~~~~~evwNEp~~~~~~~~~~~~~y~~~~~ 167 (346)
T d1uhva2 88 GFMPKKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKDADEKEYFKLYK 167 (346)
T ss_dssp CCCCTTTBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEESSCTTSTTTSGGGCHHHHHHHHH
T ss_pred eccCccccCCCCCcccccccCCChhhHHHHHHHHHHHHHHHHhhcCcccccccccccccCcccccCCCCCCHHHHHHHHH
Confidence 98876433211110000000001566789999999999999763 4567799999998532 35678999999
Q ss_pred HHHHHHHhcCCceEEEEeCCCCCCC--hhhhhccc--CCCceEEEEEeecccC
Q 009475 360 AGYDAVRKYTSTAYVIMSNRLGPAD--HKELLSFA--SGLSRVVIDVHYYNLF 408 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv~~~~~~~~--~~~~~~~~--~~~~nvv~d~H~Y~~f 408 (534)
.++++||+.+|+..|+..+...... ...++... ....-.++++|.|...
T Consensus 168 ~~~~aik~~~P~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~D~i~~H~Y~~~ 220 (346)
T d1uhva2 168 VTAKAIKEVNENLKVGGPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSK 220 (346)
T ss_dssp HHHHHHHHHCTTSCEEEEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBC
T ss_pred HHHHHHhccCCCceEeeccccCCccccHHHHHHHHHhcCCcccceeeecCCCC
Confidence 9999999999998877653221111 12222221 2234457899999653
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=4.1e-11 Score=117.57 Aligned_cols=118 Identities=19% Similarity=0.348 Sum_probs=92.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.||+.||++|+|+||+.. . + .. +.+.+.|.++||.|+.|++..... ...
T Consensus 39 ~~d~~~~k~~G~N~iR~~~----~--~-----~~-------~~~~~~cD~~Gilv~~e~~~~~~~------------~~~ 88 (304)
T d1bhga3 39 VKDFNLLRWLGANAFRTSH----Y--P-----YA-------EEVMQMCDRYGIVVIDECPGVGLA------------LPQ 88 (304)
T ss_dssp HHHHHHHHHHTCCEEECTT----S--C-----CS-------STHHHHHSTTCCEEEECCSCCCTT------------SSG
T ss_pred HHHHHHHHHcCCCEEEecC----C--C-----Ch-------HHHHHHHHhcCCeeeecccccccc------------ccc
Confidence 6899999999999999832 1 1 11 236788999999999998754211 011
Q ss_pred C-ChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeCCC
Q 009475 310 W-GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 380 (534)
Q Consensus 310 W-~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~~~ 380 (534)
. .+...+.+.+.++.+++|++++|+|++|++.|||.. .......+.+.+++.||+.||+++|.....+
T Consensus 89 ~~~~~~~~~~~~~~~~~i~~~rnhPsI~~w~~~NE~~~---~~~~~~~~~~~~~~~ik~~Dptrpv~~~~~~ 157 (304)
T d1bhga3 89 FFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPAS---HLESAGYYLKMVIAHTKSLDPSRPVTFVSNS 157 (304)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEESCCT---TSHHHHHHHHHHHHHHHTTCCSSCEEEEBCC
T ss_pred ccchHHHHHHHHHHHHHHHHhcCCCcHHHhccCCCCCc---ccchhhhhhHHHHHHHHhhCCCCceeeeccc
Confidence 1 146677899999999999999999999999999975 3355678889999999999999998886543
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=99.08 E-value=2.1e-10 Score=113.28 Aligned_cols=122 Identities=21% Similarity=0.276 Sum_probs=88.5
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCC------
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ------ 295 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~q------ 295 (534)
+||+.-..++|++.||++|+|+||+++--|...+|.++ .+ .++.+|++|+.|+++||+|||.||+....+
T Consensus 9 ~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~~G-~~---~~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~~~~~ 84 (393)
T d1kwga2 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPG-RL---EWGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRY 84 (393)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTT-BC---CCHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHHC
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEecccchhhcCCCCC-cc---CHHHHHHHHHHHHHCCCEEEEEcCCCCCchhhhccC
Confidence 45654334899999999999999999833455666543 45 378999999999999999999998762110
Q ss_pred ---CCCCCCCCCCC-----CCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC
Q 009475 296 ---NGNEHSATRDG-----FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 347 (534)
Q Consensus 296 ---ng~~~sg~~~g-----~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~ 347 (534)
...+..|.... ...+. +...+.+..+++.++.+|++++.+..+++.|||...
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~ 145 (393)
T d1kwga2 85 PEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCH 145 (393)
T ss_dssp GGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTT
T ss_pred cccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeeccccccc
Confidence 00011111110 01112 677888999999999999999999999999999863
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=98.98 E-value=3.3e-10 Score=114.96 Aligned_cols=143 Identities=18% Similarity=0.157 Sum_probs=97.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+++|+.||++|+|+||+++. |...+|.++ .|+-..+..|+++|+.|.++||+|||.+...-.. .+..+ +.+.
T Consensus 39 ~~~l~~mk~~G~n~vr~~~~-W~~~ep~~g-~~df~~~~~l~~~l~~a~~~Gl~vil~~g~~~~~---~w~~~---~~p~ 110 (354)
T d1tg7a5 39 IDIFEKVKALGFNCVSFYVD-WALLEGNPG-HYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINA---EVSGG---GFPG 110 (354)
T ss_dssp HHHHHHHHTTTCCEEEEECC-HHHHCSBTT-BCCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCT---TBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEecc-hhccCCCCC-cccccchhhHHHHHHHHHHcCCEEEEcCCCCcCc---ccccC---CCCc
Confidence 78999999999999999998 556677654 6666677889999999999999999987533110 00000 1111
Q ss_pred CC-----------hhhHHHHHHHHHHHHHH-----hcCCCeEEEEEeccCCCCCCC--ChHHHHHHHHHHHHHHHhcCCc
Q 009475 310 WG-----------DSNVADTVAVIDFLAAR-----YANRPSLAAIELINEPLAPGV--ALDTLKSYYKAGYDAVRKYTST 371 (534)
Q Consensus 310 W~-----------~~~~~~~~~~w~~lA~r-----yk~~~~vlg~eL~NEP~~~~~--~~~~~~~~~~~~~~aIR~~~p~ 371 (534)
|. +...+...+.++.|.++ |++++.|+++++-||...... ....-+++.+.+.+..|+.+..
T Consensus 111 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (354)
T d1tg7a5 111 WLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIV 190 (354)
T ss_dssp GGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCcccCCCHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeccccCccccccccchHHHHHHHHHhhhhccCcc
Confidence 21 34555566666666655 688999999999999864211 1122345666667777777777
Q ss_pred eEEEEeCCC
Q 009475 372 AYVIMSNRL 380 (534)
Q Consensus 372 ~~Iiv~~~~ 380 (534)
.++...+.+
T Consensus 191 ~p~~~~~~~ 199 (354)
T d1tg7a5 191 VPFISNDAW 199 (354)
T ss_dssp SCBBCCBSS
T ss_pred cceEeccch
Confidence 766555444
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=98.86 E-value=3.3e-09 Score=110.09 Aligned_cols=144 Identities=21% Similarity=0.263 Sum_probs=105.4
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||+.| ++|++.|+++|+|+.|+.|.| ....|+...++++..++..+++|+.|+++||..||+||+..-.+-
T Consensus 50 ~d~y~~y--~eDi~ll~~lG~~~yRfsi~W-sRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hfd~P~~---- 122 (426)
T d1ug6a_ 50 CDHYRRY--EEDIALMQSLGVRAYRFSVAW-PRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA---- 122 (426)
T ss_dssp TCHHHHH--HHHHHHHHHHTCCEEEEECCH-HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH----
T ss_pred cchhhhh--HHHHHHHHHcCCCEEEccCCH-HHcccCCCCCcChHHHHHHHHHHHHHHHcCCeEEEEecccccchh----
Confidence 3466655 899999999999999999997 455666445788889999999999999999999999998632110
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~ 359 (534)
......|. +...+.+.++-+.++++|++.... |-.+|||.. ++. +. ..+..-..
T Consensus 123 ---l~~~gGw~~~~~~~~F~~Ya~~v~~~fgd~V~~--w~TiNEP~~~~~~gy~~G~~ppg~~~~~~~~~~~~~~~~Aha 197 (426)
T d1ug6a_ 123 ---LEERGGWRSRETAFAFAEYAEAVARALADRVPF--FATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHG 197 (426)
T ss_dssp ---HHTTTGGGSHHHHHHHHHHHHHHHHHHTTTCCE--EEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ---hhccCccCCHHHHHHHHHHHHHHHHHhCcccce--EEEecCCeeEeeeccccCccccCCcchHHHHHHHHHHHHHHH
Confidence 00112355 678899999999999999997544 557899952 111 11 12233456
Q ss_pred HHHHHHHhcCCceEEEE
Q 009475 360 AGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv 376 (534)
.+++++|+..+..+.++
T Consensus 198 ~a~~~~~~~~~~~~~~~ 214 (426)
T d1ug6a_ 198 LAVEALRAAGARRVGIV 214 (426)
T ss_dssp HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHhCCCceeEE
Confidence 67888888877655444
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=98.85 E-value=1.3e-09 Score=113.86 Aligned_cols=140 Identities=16% Similarity=0.209 Sum_probs=103.8
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 301 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s 301 (534)
+||+.| ++|++.||++|+|+.|+.|.| ....|++.+++++..++..+++|+.|+++||..+|+||+..-.+-
T Consensus 54 d~y~~y--~eDi~l~~~lG~~~yRfsi~W-sRi~P~g~g~~n~~~~~~Y~~~i~~l~~~GI~P~VTL~Hf~~P~w----- 125 (443)
T d2j78a1 54 DHYNRW--KEDIEIIEKLGVKAYRFSISW-PRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFA----- 125 (443)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCH-HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chhhhh--HHHHHHHHHcCCCEEEccCCH-HHceeCCCCCcCHHHHHHHHHHHHHHHHcCCeeeEeecCccchhh-----
Confidence 466655 899999999999999999997 445665446788889999999999999999999999998632110
Q ss_pred CCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHHH
Q 009475 302 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYKA 360 (534)
Q Consensus 302 g~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~~ 360 (534)
......|. +...+.+.++-+.++++|++.-.. |=.+|||.. ++. +. ..+.....+
T Consensus 126 --l~~~gGw~~~~~v~~F~~Ya~~v~~~~gd~V~~--w~TiNEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~n~l~AHa~ 201 (443)
T d2j78a1 126 --LQLKGGWANREIADWFAEYSRVLFENFGDRVKN--WITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHAR 201 (443)
T ss_dssp --HHTTTGGGSTTHHHHHHHHHHHHHHHHTTTCCE--EEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hhhcCCccChHHHHHHHHHHHHHHHHhCccccc--eEeccCceeEeecccccCcccccccchHHHHHHHHHHHHHHHH
Confidence 00112355 678899999999999999997443 447899974 111 11 123345677
Q ss_pred HHHHHHhcCCceE
Q 009475 361 GYDAVRKYTSTAY 373 (534)
Q Consensus 361 ~~~aIR~~~p~~~ 373 (534)
+++++|+..++..
T Consensus 202 A~~~~~~~~~~~~ 214 (443)
T d2j78a1 202 AVKVFRETVKDGK 214 (443)
T ss_dssp HHHHHHHHCTTCE
T ss_pred HHHHhhhcccCCc
Confidence 8888998877644
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=98.80 E-value=3.7e-09 Score=110.39 Aligned_cols=143 Identities=17% Similarity=0.287 Sum_probs=105.4
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 301 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s 301 (534)
+||+.| ++|++.||++|+|+.|+.|.| ....|.+..++++..++..+++|+.++++||..+|+||+..-.+-
T Consensus 55 d~y~~y--~eDi~l~~~lG~~~yRfSi~W-sRI~P~g~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~dlP~~----- 126 (447)
T d1e4ia_ 55 DSYHRY--EEDIRLMKELGIRTYRFSVSW-PRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA----- 126 (447)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chhHhh--HHHHHHHHHhCCCEEEccCCH-HHcccCCCCCcCHHHHHHHHHHHHHHHHhCCeEEEEeeccccchh-----
Confidence 456555 899999999999999999997 455666556788889999999999999999999999998632110
Q ss_pred CCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC-Ch-------HHHHHHHHH
Q 009475 302 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYKA 360 (534)
Q Consensus 302 g~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~-~~-------~~~~~~~~~ 360 (534)
......|. ++..+.+.++-+.++++|++. |--|-.+|||.. ++. +. ..+......
T Consensus 127 --l~~~gGw~n~~~~~~F~~Ya~~v~~~fgdr--V~~W~TiNEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~AHa~ 202 (447)
T d1e4ia_ 127 --LQDAGGWGNRRTIQAFVQFAETMFREFHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGL 202 (447)
T ss_dssp --HHHTTTTSSTHHHHHHHHHHHHHHHHTBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hhcCCCCCCHHHHHHHHHHHHHHHHHhCCc--cceEEecCCCceeeecccccccccCcccchhhHHHhHHHHHHHHHH
Confidence 00112355 688899999999999999996 444668999973 111 11 123344556
Q ss_pred HHHHHHhcCCceEEEE
Q 009475 361 GYDAVRKYTSTAYVIM 376 (534)
Q Consensus 361 ~~~aIR~~~p~~~Iiv 376 (534)
+++++|+..++..|-+
T Consensus 203 a~~~~~~~~~~~~vGi 218 (447)
T d1e4ia_ 203 SVRRFRELGTSGQIGI 218 (447)
T ss_dssp HHHHHHHHTCSSEEEE
T ss_pred HHHHHHHhhhcceeee
Confidence 7888998887755543
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.78 E-value=2.3e-08 Score=99.02 Aligned_cols=121 Identities=19% Similarity=0.230 Sum_probs=88.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++||+.||++|+|+||+ |.... + +++++.|.++||+|+.++...+..... ..+. .....
T Consensus 42 ~~~l~~~k~~G~N~iR~----~~~~~-----~---------~~f~d~~D~~Gi~V~~e~~~~~~w~~~--~~~~-~~~~~ 100 (339)
T d2vzsa5 42 ADKLKYVLNLGLNTVRL----EGHIE-----P---------DEFFDIADDLGVLTMPGWECCDKWEGQ--VNGE-EKGEP 100 (339)
T ss_dssp HHHHHHHHHTTCCEEEE----ESCCC-----C---------HHHHHHHHHHTCEEEEECCSSSGGGTT--TSTT-SSSCC
T ss_pred HHHHHHHHHcCCCEEEe----cCCCC-----C---------HHHHHHHHHCCCeEecccccCcccccc--CCcc-cccCC
Confidence 68999999999999998 32211 1 568888999999999998755432111 0110 01112
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
+.+...+.+.+.++.+++|++++|+|++|.+.||+... ..+.+.+.+.+|+.||.++++...
T Consensus 101 ~~p~~~~~~~~~~~~~v~r~rnHPsvi~W~~gNE~~~~-------~~~~~~~~~~~~~~D~~r~~~~~s 162 (339)
T d2vzsa5 101 WVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPD-------RRIEQGYLDAMKAADFLLPVIPAA 162 (339)
T ss_dssp CCTTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCCC-------HHHHHHHHHHHHHTTCCSCEESCS
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEecCcCCCch-------HHHHHHHHHHHHHhCCCceeEecC
Confidence 23567788889999999999999999999999998742 245566678889999999887654
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=98.77 E-value=8.3e-09 Score=107.76 Aligned_cols=144 Identities=15% Similarity=0.198 Sum_probs=106.7
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||..| ++|++.|+++|+|+.|+.|.| ....|++.+++++..++..+++|+.|+++||..+|+||+..-.+-
T Consensus 54 ~d~y~~y--~eDi~l~~~lG~~~yRfSi~W-sRi~P~g~g~~n~~~~~~Y~~~i~~l~~~gi~P~vTL~H~d~P~~---- 126 (449)
T d1qoxa_ 54 CDSYHRV--EEDVQLLKDLGVKVYRFSISW-PRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQA---- 126 (449)
T ss_dssp TCTTSCH--HHHHHHHHHHTCSEEEEECCH-HHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH----
T ss_pred cchhhhh--HHHHHHHHHcCCCEEEccCCH-HHcccCCCCCcCHHHHHHHHHHHHHHHhcCCeEEEEEecccccch----
Confidence 4577766 999999999999999999997 455666545788889999999999999999999999998732110
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CC-CCh-------HHHHHHHH
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PG-VAL-------DTLKSYYK 359 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~-~~~-------~~~~~~~~ 359 (534)
......|. +...+.+.++-+.++++|++.- --|-.+|||.. ++ .+. ..+..-..
T Consensus 127 ---l~~~gGw~~~~~~~~F~~Ya~~v~~~fgd~V--~~W~T~NEP~~~~~~gy~~g~~~Pg~~~~~~~~~~~~~~~~Aha 201 (449)
T d1qoxa_ 127 ---LQDQGGWGSRITIDAFAEYAELMFKELGGKI--KQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHG 201 (449)
T ss_dssp ---HHTTTGGGSTHHHHHHHHHHHHHHHHHTTTC--CEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ---hccccCcCCHHHHHHHHHHHHHHHHHhcccc--cceEEecCcceeccccccccccCcccccHHHHHHHHHHHHHHHH
Confidence 00122355 6788999999999999999964 33557899964 11 111 12234456
Q ss_pred HHHHHHHhcCCceEEEE
Q 009475 360 AGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv 376 (534)
.+++++|+..++..|-+
T Consensus 202 ~a~~~~~~~~~~~~vgi 218 (449)
T d1qoxa_ 202 RAVTLFRELGISGEIGI 218 (449)
T ss_dssp HHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhhCCCceeee
Confidence 67888998887755544
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=98.70 E-value=1.7e-08 Score=105.94 Aligned_cols=142 Identities=16% Similarity=0.213 Sum_probs=103.7
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 301 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s 301 (534)
+||..| ++|++.|+++|+|+.|+.|.| ....|...+++++..++..+++|+.|+++||..+|+||+..-.+-
T Consensus 51 d~y~~y--~eDi~l~~~lG~~~yRfSisW-sRI~P~g~g~~n~~gl~~Y~~~id~l~~~GI~P~VTL~H~dlP~~----- 122 (468)
T d1pbga_ 51 DFYHKY--PVDLELAEEYGVNGIRISIAW-SRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEA----- 122 (468)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCH-HHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHH-----
T ss_pred chhhhh--HHHHHHHHHhCCCEEEccCCH-HHcCcCCCCCcCHHHHHHHHHHHHHHHHhCCeeEEEEecccchhh-----
Confidence 566655 999999999999999999997 445565445788889999999999999999999999998632110
Q ss_pred CCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC------------CCC--ChH-------HHHHHHH
Q 009475 302 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV--ALD-------TLKSYYK 359 (534)
Q Consensus 302 g~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~------------~~~--~~~-------~~~~~~~ 359 (534)
......|. +...+.|.++-+.++++|++.. -|=.+|||.. ++. ... .+..-..
T Consensus 123 --l~~~GGw~~~~~v~~F~~Ya~~~~~~fgdvk---~W~T~NEP~~~~~~gy~~G~~~P~~~~~~~~~~~~~hn~l~AHa 197 (468)
T d1pbga_ 123 --LHSNGDFLNRENIEHFIDYAAFCFEEFPEVN---YWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHA 197 (468)
T ss_dssp --HHHTTGGGSTHHHHHHHHHHHHHHHHCTTCC---EEEEESCHHHHHHHHHTSCCSTTCCCSCHHHHHHHHHHHHHHHH
T ss_pred --HhhcCccCCHHHHHHHHHHHHHHHHhcCCce---EEEEecCccccccccccccccCCccccchhhHHHhhhhHHHHHH
Confidence 00112365 6788999999999999997643 3668999983 111 111 2233456
Q ss_pred HHHHHHHhcCCceEEEE
Q 009475 360 AGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv 376 (534)
++++++|+..++..|-+
T Consensus 198 ~a~~~~~~~~~~~~ig~ 214 (468)
T d1pbga_ 198 RAVKLYKDKGYKGEIGV 214 (468)
T ss_dssp HHHHHHHHTTCSSEEEE
T ss_pred HHHHHHHhhccccccce
Confidence 78888898887644433
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=98.68 E-value=5.3e-09 Score=109.72 Aligned_cols=113 Identities=19% Similarity=0.279 Sum_probs=89.0
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
-+||+.| ++|++.|+++|+|+.|+.|.| ....|+...++++..++..+++|+.|+++||..||+|||..-.+-
T Consensus 53 ~d~y~~y--~eDi~l~~~lG~~~yRfSi~W-sRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~HfdlP~~---- 125 (464)
T d1gnxa_ 53 TDHYHRW--REDVALMAELGLGAYRFSLAW-PRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQE---- 125 (464)
T ss_dssp TCHHHHH--HHHHHHHHHTTCSEEEEECCH-HHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH----
T ss_pred cchhhhh--HHHHHHHHHcCCCEEEccCCH-HHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEecCccHHH----
Confidence 3466655 899999999999999999997 445565445788889999999999999999999999998732110
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
......|. +...+.|.++-+.++++|++.-.. |-.+|||.
T Consensus 126 ---l~~~gGW~n~~~v~~F~~YA~~v~~~fgd~Vk~--W~T~NEP~ 166 (464)
T d1gnxa_ 126 ---LENAGGWPERATAERFAEYAAIAADALGDRVKT--WTTLNEPW 166 (464)
T ss_dssp ---HHHTTCTTSTHHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred ---HhhhCCCCCHHHHHHHHHHHHHHHHHhccccce--eEEccCch
Confidence 00112365 688899999999999999997433 55889996
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=98.66 E-value=9.3e-08 Score=93.64 Aligned_cols=119 Identities=21% Similarity=0.141 Sum_probs=86.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.|++.||++|+|+||+.- . | + . +++++.|.++||.|+.++-..-.. ....+.. ....
T Consensus 39 ~~di~l~k~~G~N~iR~~h----~--p--~---~-------~~~~d~cD~~Gilv~~e~~~~~~~---~~~~~~~-~~~~ 96 (297)
T d1yq2a5 39 REDLALMKRFNVNAIRTSH----Y--P--P---H-------PRLLDLADEMGFWVILECDLETHG---FEAGGWV-ENPS 96 (297)
T ss_dssp HHHHHHHHHTTCCEEEETT----S--C--C---C-------HHHHHHHHHHTCEEEEECSCBCGG---GTTTTTT-TCGG
T ss_pred HHHHHHHHHCCCCEEEccC----C--C--C---h-------HHHHHHHHhcCCEEEEeecccccc---ccccCcc-CCcc
Confidence 6899999999999999932 1 1 1 1 578999999999999987532110 0000000 0000
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
-.+...+.+.+.++.+.+|++++|+|+.|.+.||+.. ....+++.+.+++.+|++++....
T Consensus 97 ~~~~~~~~~~~~~~emV~r~~NHPSIi~W~~gNE~~~--------~~~~~~~~~~~k~~D~tRp~~~~~ 157 (297)
T d1yq2a5 97 DVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGT--------GSNLAAMAAWAHARDSSRPVHYEG 157 (297)
T ss_dssp GCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCC--------CHHHHHHHHHHHHHCTTSCEECTT
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCceEeecccccCCc--------hHHHHHHHHHHHHhccCCcccccC
Confidence 0145677888999999999999999999999999874 234567788999999999987653
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=1.5e-07 Score=91.66 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=85.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.||+.||++|+|+||+.. . | . -+++++.|.++||.|+.++-..-.+. ......
T Consensus 40 ~~di~l~k~~G~N~iR~~~----~--p-----~-------~~~~~~~~D~~Gilv~~e~~~~~~~~--------~~~~~~ 93 (292)
T d1jz8a5 40 VQDILLMKQNNFNAVRCSH----Y--P-----N-------HPLWYTLCDRYGLYVVDEANIETHGM--------VPMNRL 93 (292)
T ss_dssp HHHHHHHHHTTCCEEECTT----S--C-----C-------CHHHHHHHHHHTCEEEEECSCBCTTS--------SSTTTT
T ss_pred HHHHHHHHhcCCCEEEecC----C--C-----C-------hHHHHHHHhhcCCeEEeeeeecccCC--------cccCCC
Confidence 6799999999999999832 1 1 1 15689999999999999984321100 000001
Q ss_pred C-ChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 310 W-GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 310 W-~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
. .+...+.+.+.++.+.+|++++|+|++|.+.||+.. ....+.+.+.+++.+|++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~v~r~~nHPSvi~W~~~NE~~~--------~~~~~~~~~~~~~~d~~r~~~~~~ 155 (292)
T d1jz8a5 94 TDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGH--------GANHDALYRWIKSVDPSRPVQYEG 155 (292)
T ss_dssp TTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCC--------CHHHHHHHHHHHHHCTTSCEECCT
T ss_pred CCCHHHHHHHHHHHHHHHHHccCCCcHHHhcccccCCc--------chhhHHHHHHHHHHhhcCcccccc
Confidence 1 156678899999999999999999999999999974 234556678899999999988764
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.63 E-value=2.3e-08 Score=84.20 Aligned_cols=82 Identities=12% Similarity=0.097 Sum_probs=66.0
Q ss_pred CcCCcCCCCCcccccceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeecCCCC
Q 009475 51 PSRFDDIPNKDLLDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 130 (534)
Q Consensus 51 ~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~~g~~ 130 (534)
|..|+ ++.. ...++||+ .+|||+|++..|. |++.++ ..|.|.|...+.+.+.+|+ ||+||+++. +
T Consensus 29 ~e~F~-l~~~----~g~y~lr~-~~gkyw~~~~dG~--l~~~~~---~~~~F~le~~~~~~~~~~a-nGkYL~~~~---~ 93 (111)
T d1dfca4 29 YDVFQ-LEFN----DGAYNIKD-STGKYWTVGSDSA--VTSSGD---TPVDFFFEFCDYNKVAIKV-GGRYLKGDH---A 93 (111)
T ss_dssp CCCBE-EEEE----TTEEEEEC-TTSCBCEECSSCB--EESCCS---SCCCBEEEEEETTEEEEEE-TTEEEEECG---G
T ss_pred CcEEE-EEEc----CCEEEEEc-CCCCEEEEcCCCc--EEeCCC---CCCCEEEEEeCCCEEEEcc-CCeEEEeCC---C
Confidence 57787 4332 25999998 7999999987764 666654 3588999988999999996 999999976 3
Q ss_pred ceEEEeecCCCCCceEE
Q 009475 131 NGLVAVSNTAGYSETFQ 147 (534)
Q Consensus 131 ~~~~a~~~~~~~~EtF~ 147 (534)
+.|.|++++++..|.|+
T Consensus 94 G~L~A~~~~~~~~~lwE 110 (111)
T d1dfca4 94 GVLKASAETVDPASLWE 110 (111)
T ss_dssp GBEEEEESSCCGGGCBB
T ss_pred CeEEeCCCCCCccceEe
Confidence 46999999999999876
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=98.60 E-value=1.6e-08 Score=105.85 Aligned_cols=112 Identities=15% Similarity=0.190 Sum_probs=88.0
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC-CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 300 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~ 300 (534)
+||+.| ++|++.|+++|+|+.|+.|.|- ...|+. ...+++..++..+++|+.|+++||..+|+|||..-.+-
T Consensus 54 d~y~ry--~eDi~l~~~lG~~~yRfSi~Ws-RI~P~G~~g~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hfd~P~~---- 126 (462)
T d1wcga1 54 DSYHKY--KEDVAIIKDLNLKFYRFSISWA-RIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQY---- 126 (462)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHH-HHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH----
T ss_pred chhhhh--HHHHHHHHHhCCCEEEeeCcHH-HcccCCCCCCcCHHHHHHHHHHHHHHHhcCCeeEEEeccccchhh----
Confidence 567666 8999999999999999999974 445653 34677889999999999999999999999998732110
Q ss_pred CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 301 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 301 sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
......|. ++..+.|.++-+.++++|++.-.. |-.+|||.
T Consensus 127 ---l~~~GGW~~~~~v~~F~~Ya~~v~~~fgd~V~~--W~T~NEP~ 167 (462)
T d1wcga1 127 ---LQDLGGWVNPIMSDYFKEYARVLFTYFGDRVKW--WITFNEPI 167 (462)
T ss_dssp ---HHHTTGGGSTTHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred ---hhhcCCcccHHHHHHHHHHHHHHHHhccccchh--eeeecCCc
Confidence 00112355 688899999999999999997433 45789996
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=98.58 E-value=1.7e-08 Score=106.52 Aligned_cols=113 Identities=18% Similarity=0.247 Sum_probs=86.9
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC--CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
+||+.| ++|++.||++|+|+.|+.|.| ....|.. ..++++..++..+++|+.++++||..+|+||+..-.+-
T Consensus 70 d~y~~y--~eDi~l~~~lG~~~yRfSi~W-sRI~P~g~~~g~~n~~gl~~Y~~~i~~l~~~GIeP~vTL~HfdlP~~--- 143 (490)
T d1cbga_ 70 DEYHRY--KEDIGIMKDMNLDAYRFSISW-PRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQA--- 143 (490)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCH-HHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---
T ss_pred chhhhh--HHHHHHHHHcCCCEEEccCCH-HHcCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeecCCChHH---
Confidence 566666 899999999999999999997 4445542 34678889999999999999999999999998631100
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
-. +....|. ++..+.|.++-+.++++|++.-.. |-.+|||.
T Consensus 144 l~---~~~Ggw~n~~~~~~F~~Ya~~v~~~fgd~V~~--W~T~NEP~ 185 (490)
T d1cbga_ 144 LE---DEYRGFLGRNIVDDFRDYAELCFKEFGDRVKH--WITLNEPW 185 (490)
T ss_dssp HH---HHHCGGGSTTHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred Hh---hcccccCCHHHHHHHHHHHHHHHHHhcCccce--EEEccCCc
Confidence 00 0011243 678899999999999999997433 45889985
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=98.55 E-value=2.8e-08 Score=104.97 Aligned_cols=114 Identities=14% Similarity=0.166 Sum_probs=88.2
Q ss_pred hhccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC--CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCC
Q 009475 221 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 298 (534)
Q Consensus 221 ~~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~ 298 (534)
-+||+.| ++|++.||++|+|+.|+.|.| ....|.. .+++++..++..+++|+.|+++||..+|+||+..-.+-
T Consensus 71 ~d~y~~y--~eDi~l~~~lG~~~yRfSI~W-sRI~P~g~~~~~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~HfdlP~~-- 145 (499)
T d1e4mm_ 71 CDSFSYW--QKDIDVLDELNATGYRFSIAW-SRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQT-- 145 (499)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCH-HHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH--
T ss_pred cchHHHH--HHHHHHHHHhCCCEEEccCCH-HHcCcCCCCCCCCCHHHHHHHHHHHHHHHHcCCcceEEEecCchHHH--
Confidence 3567666 999999999999999999997 4445543 24578889999999999999999999999998632110
Q ss_pred CCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 299 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 299 ~~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
- .+....|. ++..+.|.++-+.++++|++.-.. |=.+|||.
T Consensus 146 -l---~~~~GGW~~~~~~~~F~~YA~~v~~~fgd~Vk~--W~T~NEP~ 187 (499)
T d1e4mm_ 146 -L---QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKY--WLTINQLY 187 (499)
T ss_dssp -H---HHHHCGGGSTHHHHHHHHHHHHHHHHHTTTCCE--EEEESCTT
T ss_pred -H---HHhcccccCHHHHHHHHHHHHHHHHhhccccce--eEEccCce
Confidence 0 00012355 688999999999999999996433 44789997
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=98.54 E-value=3e-08 Score=104.40 Aligned_cols=113 Identities=16% Similarity=0.248 Sum_probs=87.2
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCC--CCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 299 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~ 299 (534)
+||+.| ++|++.||++|+|+.|+.|.|- ...|+. ++++++..++..+++|+.++++||..||+||+..-.+-
T Consensus 64 d~y~ry--~eDi~l~~~lG~~~yRfSisWs-RI~P~g~~~g~~n~~gl~~Y~~~id~l~~~GI~P~vTL~Hfd~P~~--- 137 (484)
T d1v02a_ 64 DSYHMY--AEDVRLLKEMGMDAYRFSISWP-RILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQA--- 137 (484)
T ss_dssp CHHHHH--HHHHHHHHHTTCSEEEEECCHH-HHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---
T ss_pred chhhhh--HHHHHHHHHhCCCEEEccCCHH-HcCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEecCCcccce---
Confidence 566666 8999999999999999999974 444542 35788889999999999999999999999998632110
Q ss_pred CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCC
Q 009475 300 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 345 (534)
Q Consensus 300 ~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~ 345 (534)
- .+....|. ++..+.|.++-+.++++|++.-.. |-.+|||.
T Consensus 138 l---~~~~Ggw~n~~~~~~F~~Ya~~v~~~fgd~V~~--W~T~NEP~ 179 (484)
T d1v02a_ 138 L---VDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKN--WLTFNEPE 179 (484)
T ss_dssp H---HHHHCGGGSTHHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred e---eeecCcccCHHHHHHHHHhhHHHHHHhcchhhc--eEEecCcc
Confidence 0 00012354 678899999999999999997433 45789995
|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=98.46 E-value=1.1e-07 Score=99.96 Aligned_cols=147 Identities=16% Similarity=0.249 Sum_probs=101.9
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCC---------------------------CCCCCchHHHHHHHH
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP---------------------------KPFVGGSSKVLDNAF 274 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~---------------------------~~~~~~~l~~ld~~v 274 (534)
+||+.+ ++|++.||++|+|+.|+.|.|- ...|++. ++++++.++..+++|
T Consensus 58 d~y~~y--~eDi~l~~~lG~~~yRfSI~Ws-RI~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~gl~~Y~~~i 134 (489)
T d1uwsa_ 58 GYWGNY--KTFHDNAQKMGLKIARLNVEWS-RIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIF 134 (489)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHH-HHCCSCCCCC--CCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred hHHHhH--HHHHHHHHHcCCCEEEecccHH-hcCcCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 356555 8999999999999999999973 4445421 346677999999999
Q ss_pred HHHHHCCCEEEEEcCCCCCCCCCCC----CCCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC---
Q 009475 275 DWAEKYGVKVIVDLHAAPGSQNGNE----HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--- 346 (534)
Q Consensus 275 ~~a~~~Gl~VIlDlH~~pG~qng~~----~sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~--- 346 (534)
+.++++||..+|+||+..-.+--.+ ..+.......|. +...+.|.++-+.++++|++.-.. |=.+|||..
T Consensus 135 d~l~~~GIeP~VTL~H~dlP~~L~d~~~~~~~~f~~~GGW~n~~~v~~F~~YA~~v~~~fgdrVk~--WiTiNEP~~~~~ 212 (489)
T d1uwsa_ 135 KDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLVDE--YSTMNEPNVVGG 212 (489)
T ss_dssp HHHHHTTCEEEEESCSSCCBTTTBCHHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTTTCSE--EEEEECHHHHHH
T ss_pred HHHHHcCCccEEEEcCCCCcHHHHhhhhccccccccCCCcCCHHHHHHHHHHHHHHHHHhcCcceE--EEeeCCCcEEee
Confidence 9999999999999998732211000 000001123576 788999999999999999997433 447899962
Q ss_pred -----------CC-CCh-------HHHHHHHHHHHHHHHhcCCceE
Q 009475 347 -----------PG-VAL-------DTLKSYYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 347 -----------~~-~~~-------~~~~~~~~~~~~aIR~~~p~~~ 373 (534)
+. .+. ..+.....++++++|+..+..+
T Consensus 213 ~gy~g~~~~~pp~~~~~~~~~~~~hn~l~Aha~a~~~~~~~~~~~i 258 (489)
T d1uwsa_ 213 LGYVGVKSGFPPGYLSFELSRRAMYNIIQAHARAYDGIKSVSKKPV 258 (489)
T ss_dssp HHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCE
T ss_pred cccccccCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 01 111 2233455677888888876544
|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.40 E-value=7.5e-08 Score=99.57 Aligned_cols=111 Identities=21% Similarity=0.333 Sum_probs=84.8
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCC
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 301 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~s 301 (534)
+||+.| ++|++.||++|+|+.|+.|.| ....|++ .++++..++..+++|+.++++||..||+||+..-.+.
T Consensus 47 d~y~ry--~eDi~ll~~lG~~~yRfSisW-sRI~P~~-g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~d~P~~----- 117 (423)
T d1vffa1 47 NHWELY--RDDIQLMTSLGYNAYRFSIEW-SRLFPEE-NKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLW----- 117 (423)
T ss_dssp CHHHHH--HHHHHHHHHHTCCEEEEECCH-HHHCSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chHHhh--HHHHHHHHHhCCCEEEecCcH-HHeecCC-CccChHHHHHHHHHHHHHHhcCCeeEEeecCCcchHH-----
Confidence 466655 899999999999999999997 4455655 4778889999999999999999999999998632110
Q ss_pred CCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 302 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 302 g~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
......|. +...+.+.++-+.+++++ +. |--|-.+|||..
T Consensus 118 --l~~~gGw~~~~~v~~F~~Ya~~~~~~~-d~--Vk~W~T~NEP~~ 158 (423)
T d1vffa1 118 --FMKKGGFLREENLKHWEKYIEKVAELL-EK--VKLVATFNEPMV 158 (423)
T ss_dssp --HHHTTGGGSGGGHHHHHHHHHHHHHHT-TT--CCEEEEEECHHH
T ss_pred --HHhhhhccCHHHHHHHHHHHHHHHHhh-cc--cceeeccCCcce
Confidence 00112354 678899999999888766 43 434668999974
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=98.39 E-value=6.8e-06 Score=80.45 Aligned_cols=156 Identities=14% Similarity=0.195 Sum_probs=99.2
Q ss_pred HHHHhCCccEEEeCcc-cccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEE---EEcCC-CCCCCCCCCCCCCCCCCC
Q 009475 234 KFLSSNGINAVRIPVG-WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHA-APGSQNGNEHSATRDGFQ 308 (534)
Q Consensus 234 ~~ia~~G~N~VRIPv~-~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VI---lDlH~-~pG~qng~~~sg~~~g~~ 308 (534)
+.+-..-||.+-..-. -|...+|.++ .| .++.+|++|++|+++||+|. |=.|. .|.. ..
T Consensus 30 ~~~~~~~fn~~t~~n~~kW~~~ep~~G-~~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~~~p~w------------~~ 93 (302)
T d1nq6a_ 30 ASTLDAQFGSVTPENEMKWDAVESSRN-SF---SFSAADRIVSHAQSKGMKVRGHTLVWHSQLPGW------------VS 93 (302)
T ss_dssp HHHHHHHCSEEEESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEEESTTCCTT------------TT
T ss_pred HHHHHHhCCeeeeccCccchhhcCCCC-cC---CcHHHHHHHHHHHHCCCEEEeeccccccccccc------------cc
Confidence 3333334888886533 2555666554 34 47889999999999999985 22221 1111 11
Q ss_pred CCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC----ChHHH-----HHHHHHHHHHHHhcCCceEEEEeC
Q 009475 309 EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 309 ~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
.+. +...+.+.++++.+++||++. |..||++|||..... ....+ ..+++.+++++|+++|+..+++.+
T Consensus 94 ~~~~~~~~~~~~~~i~~v~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~g~~~~~~a~~~ar~~dP~a~l~~nd 171 (302)
T d1nq6a_ 94 PLAATDLRSAMNNHITQVMTHYKGK--IHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKLCYND 171 (302)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCC--cceEEEeccccccCCCCccCCChhhhhccHHHHHHHHHHHHHhCCCCceeecc
Confidence 122 455667889999999999985 778999999965321 11112 247899999999999999988864
Q ss_pred C-CCCCCh--hhh-------hcccCCCceEEEEEeeccc
Q 009475 379 R-LGPADH--KEL-------LSFASGLSRVVIDVHYYNL 407 (534)
Q Consensus 379 ~-~~~~~~--~~~-------~~~~~~~~nvv~d~H~Y~~ 407 (534)
. ..+... ..+ ..-..+.+.+.+..|.+..
T Consensus 172 ~~~~~~~~~~~~~~~~i~~l~~~~~~id~iG~q~H~~~~ 210 (302)
T d1nq6a_ 172 YNTDGQNAKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSN 210 (302)
T ss_dssp SSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTT
T ss_pred cccccCchhhHHHHHHHHHHHhccCCcceeEEEeccCCC
Confidence 2 111111 111 1112456788888887743
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=98.39 E-value=1.4e-06 Score=85.80 Aligned_cols=162 Identities=19% Similarity=0.227 Sum_probs=99.6
Q ss_pred HHHHHHhCCccEEEeCcc-cccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCC
Q 009475 232 DFKFLSSNGINAVRIPVG-WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW 310 (534)
Q Consensus 232 d~~~ia~~G~N~VRIPv~-~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W 310 (534)
.++.+-..-||.+..--. -|...+|.++ .| .++.+|++|++|+++||.|+- |...- ++........+
T Consensus 28 ~y~~~~~~~fn~~t~~n~~kW~~iep~~g-~~---~~~~~D~~v~~a~~~gl~v~g--h~lvw------~~~~p~~~~~~ 95 (312)
T d1fh9a_ 28 QYKAIADSEFNLVVAENAMKWDATEPSQN-SF---SFGAGDRVASYAADTGKELYG--HTLVW------HSQLPDWAKNL 95 (312)
T ss_dssp HHHHHHHHHCSEEEESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEE--EEEEE------SSSCCHHHHTC
T ss_pred HHHHHHHHhCCcccccccCcchhhcCCCC-cC---CcHHHHHHHHHHHHCCCEEEE--ecccc------ccccccccccc
Confidence 344444456888865322 2555666543 34 368899999999999999863 32211 00000000111
Q ss_pred C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC----ChHHH----HHHHHHHHHHHHhcCCceEEEEeCCC-
Q 009475 311 G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL----KSYYKAGYDAVRKYTSTAYVIMSNRL- 380 (534)
Q Consensus 311 ~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~----~~~~~----~~~~~~~~~aIR~~~p~~~Iiv~~~~- 380 (534)
. +...+.+.++++.+++||++. |..||++|||..... ..... ..|++.+++++|+++|+..+++.+..
T Consensus 96 ~~~~~~~~~~~~i~~v~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~lg~~~i~~a~~~ar~~dP~a~l~~n~~~~ 173 (312)
T d1fh9a_ 96 NGSAFESAMVNHVTKVADHFEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDYNV 173 (312)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEEEEEESSC
T ss_pred chHHHHHHHHHHHHHHHHhcCCC--ceEEEEecccccCCCCCcCCchHHHhhhHHHHHHHHHHHHhhCCCceEEeecCcc
Confidence 2 344566778999999999985 788999999975321 11111 25789999999999999998886421
Q ss_pred CCCC--hhhhh-------cccCCCceEEEEEeeccc
Q 009475 381 GPAD--HKELL-------SFASGLSRVVIDVHYYNL 407 (534)
Q Consensus 381 ~~~~--~~~~~-------~~~~~~~nvv~d~H~Y~~ 407 (534)
.... ...+. ....+.+.+.+..|.+..
T Consensus 174 ~~~~~~~~~~~~~i~~l~~~g~~id~ig~q~H~~~~ 209 (312)
T d1fh9a_ 174 EGINAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVG 209 (312)
T ss_dssp SSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEETT
T ss_pred cccchhHHHHHHHHHHHHhCCCCccceeEeeccccc
Confidence 1111 11111 112346778888998754
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=98.34 E-value=5.6e-06 Score=81.77 Aligned_cols=133 Identities=13% Similarity=0.173 Sum_probs=85.6
Q ss_pred HHHHHhCCccEEEeCcc-cccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCC-CCCCCCCCCCCCCCCCC
Q 009475 233 FKFLSSNGINAVRIPVG-WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG-SQNGNEHSATRDGFQEW 310 (534)
Q Consensus 233 ~~~ia~~G~N~VRIPv~-~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG-~qng~~~sg~~~g~~~W 310 (534)
.+.+...-||.+=..=. .|...+|.++ .| .++.+|++|++|+++||.|.- |...- .+...+... ...
T Consensus 31 y~~~~~~~fn~~t~~n~~kW~~iEp~~G-~~---~~~~~D~~v~~a~~~gi~v~g--h~l~W~~~~p~~~~~-----~~~ 99 (324)
T d1vbua1 31 YMEVARREFNILTPENQMKWDTIHPERD-RY---NFTPAEKHVEFAEENDMIVHG--HTLVWHNQLPGWITG-----REW 99 (324)
T ss_dssp HHHHHHHHCSEEEESSTTSHHHHCCBTT-EE---ECHHHHHHHHHHHHTTCEEEE--EEEECSSSCCHHHHT-----SCC
T ss_pred HHHHHHHhcCccccccCCchHHhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--ecCcccccCCccccc-----ccc
Confidence 44444445888875522 2555666554 34 478899999999999999853 32210 111100000 011
Q ss_pred C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC---hHH----HHHHHHHHHHHHHhcCCceEEEEeC
Q 009475 311 G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA---LDT----LKSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 311 ~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~---~~~----~~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
. +...+.+.++.+.+++||++. |..||++|||...... ... -..+++.+++++|+++|+..+++.+
T Consensus 100 ~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~a~~~ar~~dP~a~l~~n~ 173 (324)
T d1vbua1 100 TKEELLNVLEDHIKTVVSHFKGR--VKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWAKEADPDAILIYND 173 (324)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTT--CCEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred chHHHHHHHHHHHHHHHHhcCCC--ceEEEEecccccCCCCccCChHHHHhHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 1 345677888999999999985 5669999999653211 111 1367899999999999999888864
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=98.34 E-value=3.6e-07 Score=95.81 Aligned_cols=146 Identities=18% Similarity=0.305 Sum_probs=99.3
Q ss_pred hccCCCCCHHHHHHHHhCCccEEEeCcccccccCCCCCC-----------------------------CCCCchHHHHHH
Q 009475 222 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK-----------------------------PFVGGSSKVLDN 272 (534)
Q Consensus 222 ~hw~~~ite~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~-----------------------------~~~~~~l~~ld~ 272 (534)
+||+.+ ++|++.|+++|+|+.|+.|.|- ...|.+.. .++++.++..++
T Consensus 57 d~y~~y--~eDi~l~~~lG~~~yRfSi~Ws-Ri~P~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~gv~~Y~~ 133 (481)
T d1qvba_ 57 GYWNLN--QNDHDLAEKLGVNTIRVGVEWS-RIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVE 133 (481)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHH-HHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHH
T ss_pred chhhcc--HHHHHHHHHcCCCEEEccCcHH-hcCcCCCCcccccccccccccccccccccchhhhccccCCHHHHHHHHH
Confidence 466655 8999999999999999999973 44443211 135568999999
Q ss_pred HHHHHHHCCCEEEEEcCCCCCCCCCCCC-----CCCCCCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 273 AFDWAEKYGVKVIVDLHAAPGSQNGNEH-----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 273 ~v~~a~~~Gl~VIlDlH~~pG~qng~~~-----sg~~~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+|+.++++||..+|+||+..-.+--.+. .|.......|. +...+.|.++-+.++++|++.-.. |=.+|||..
T Consensus 134 ~i~~l~~~GI~P~VTL~H~dlP~~L~d~~~~~~~g~~~~~GGW~n~~~v~~F~~YA~~v~~~fgdrVk~--WiTiNEP~~ 211 (481)
T d1qvba_ 134 MYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGELPVM--WSTMNEPNV 211 (481)
T ss_dssp HHHHHHTTTCEEEEESCCSCCBTTTBCHHHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTTSCSE--EEEEECHHH
T ss_pred HHHHHHHhCCeeEEEEecCCCcHHHhhhhhcccccccccCCCccCHHHHHHHHHHHHHHHHHhcchhhe--eEecCCCcE
Confidence 9999999999999999986322110000 00000112466 788999999999999999997433 457899952
Q ss_pred --------------CC-CCh-------HHHHHHHHHHHHHHHhcCCce
Q 009475 347 --------------PG-VAL-------DTLKSYYKAGYDAVRKYTSTA 372 (534)
Q Consensus 347 --------------~~-~~~-------~~~~~~~~~~~~aIR~~~p~~ 372 (534)
++ .+. ..+.....++++++|+..+..
T Consensus 212 ~~~~gy~~~~G~~~Pg~~~~~~~~~a~~~~l~AHa~A~~~~~~~~~~~ 259 (481)
T d1qvba_ 212 VYEQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKKP 259 (481)
T ss_dssp HHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred EEeeccccccccCCCCccchhhHhHHHHHHHHHHHHHHHHHhhcccCc
Confidence 01 111 123344566788888887653
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.18 E-value=7.8e-06 Score=79.99 Aligned_cols=120 Identities=20% Similarity=0.174 Sum_probs=82.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
+.||+.||++|+|+||+.-+ ..+ + + +.+++.|.++||.|+.++-... .+. .
T Consensus 48 ~~di~l~ke~G~N~IR~~~~----~~~--p-~---------~~f~d~cD~~GilV~~e~~~~~---~~~----------~ 98 (348)
T d2je8a5 48 QTLFRDMKEANMNMVRIWGG----GTY--E-N---------NLFYDLADENGILVWQDFMFAC---TPY----------P 98 (348)
T ss_dssp HHHHHHHHHTTCCEEEECTT----SCC--C-C---------HHHHHHHHHHTCEEEEECSCBS---SCC----------C
T ss_pred HHHHHHHHHcCCCEEecCCC----CCC--C-C---------HHHHHHHHHCCCEEEeccchhc---cCC----------C
Confidence 67999999999999999321 111 1 1 5678999999999999985321 100 0
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCC--------CCChHHHHH--------HHHHHHHHHHhcCCceE
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP--------GVALDTLKS--------YYKAGYDAVRKYTSTAY 373 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~--------~~~~~~~~~--------~~~~~~~aIR~~~p~~~ 373 (534)
..+...+.+.+-++.+.+|+++||+|++|.+.||+... ......... +.......+++.+|.++
T Consensus 99 ~~~~~~~~~~~~~~~~I~r~rNHPSIi~W~~gnE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (348)
T d2je8a5 99 SDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRF 178 (348)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEEEeccCccccchhhccchhhhhHHHHHHHHHhhhhhHHHHHHHHHHHhCCCCc
Confidence 11456778888999999999999999999999997531 112222222 22334566778889888
Q ss_pred EEEeC
Q 009475 374 VIMSN 378 (534)
Q Consensus 374 Iiv~~ 378 (534)
+...+
T Consensus 179 ~~~~~ 183 (348)
T d2je8a5 179 YVHSS 183 (348)
T ss_dssp EESSB
T ss_pred eecCC
Confidence 87654
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=98.15 E-value=2.2e-05 Score=77.62 Aligned_cols=127 Identities=13% Similarity=0.108 Sum_probs=82.7
Q ss_pred CccEEEeCcc-cccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEE----EcCCCCCCCCCCCCCCCCCCCCCCC-hh
Q 009475 240 GINAVRIPVG-WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV----DLHAAPGSQNGNEHSATRDGFQEWG-DS 313 (534)
Q Consensus 240 G~N~VRIPv~-~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIl----DlH~~pG~qng~~~sg~~~g~~~W~-~~ 313 (534)
-||.+=..=. -|...+|.++ .| .++.+|++|++|+++||.|.- --+..|...... . ....+. +.
T Consensus 36 ~fn~~t~~n~~kW~~iep~~g-~~---~~~~~D~~v~~a~~~gi~v~gh~lvw~~~~P~W~~~~-----~-~~~~~~~~~ 105 (330)
T d1n82a_ 36 HVNSITAENHMKFEHLQPEEG-KF---TFQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQD-----G-QGHFVSRDV 105 (330)
T ss_dssp HCSEEEESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCGGGGBC-----S-SSSBCCHHH
T ss_pred hcCccccccCCChHhhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEEeecccCCCCCchhccC-----C-cCCcCCHHH
Confidence 4677765422 2555666553 34 468899999999999999853 223334321100 0 011112 33
Q ss_pred hHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC----ChHHH-----HHHHHHHHHHHHhcCCceEEEEeC
Q 009475 314 NVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 314 ~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
..+.+.++++.+++||++. |..||++|||..... ....+ ..+++.+++++|+++|+..+++.+
T Consensus 106 ~~~~~~~~i~~v~~ry~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~~~af~~ar~~~P~a~l~~n~ 177 (330)
T d1n82a_ 106 LLERMKCHISTVVRRYKGK--IYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDALLFYND 177 (330)
T ss_dssp HHHHHHHHHHHHHHHHTTT--CCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCC--ceeEEEeccccccCccccccCChhhhccChHHHHHHHHHHHHhCCcceEeecc
Confidence 4567788999999999986 677999999964221 11122 367899999999999999988864
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=98.11 E-value=1.7e-05 Score=77.75 Aligned_cols=133 Identities=16% Similarity=0.181 Sum_probs=85.3
Q ss_pred HHHHHhCCccEEEeCcc--cccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCC
Q 009475 233 FKFLSSNGINAVRIPVG--WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW 310 (534)
Q Consensus 233 ~~~ia~~G~N~VRIPv~--~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W 310 (534)
.+.+-..-||.+= |-+ .|...+|.++ .| .++.+|++|++|+++||.|..-.--.+. +...+.. ...+
T Consensus 30 y~~~~~~~fn~~t-~~n~~kW~~iep~~G-~~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~-~~p~w~~-----~~~~ 98 (320)
T d1xyza_ 30 YNSILQREFSMVV-CENEMKFDALQPRQN-VF---DFSKGDQLLAFAERNGMQMRGHTLIWHN-QNPSWLT-----NGNW 98 (320)
T ss_dssp HHHHHHHHCSEEE-ESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSS-SCCHHHH-----TSCC
T ss_pred HHHHHHHhCCeee-ecccCchHHhCCCCC-cc---ChHHHHHHHHHHHHCCCEEEeeccccCC-CCCcchh-----cccc
Confidence 3444344478774 432 3666677654 44 3788999999999999998632211110 0000000 0011
Q ss_pred C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC---ChHHH-----HHHHHHHHHHHHhcCCceEEEEeC
Q 009475 311 G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTL-----KSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 311 ~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~---~~~~~-----~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
. +...+.+.++.+.+++||++. |..||++|||..... ....+ .+++..+++++|+.+|+..+++.+
T Consensus 99 ~~~~~~~~~~~~i~~v~~ry~g~--i~~WeV~NEp~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~dp~a~l~~n~ 173 (320)
T d1xyza_ 99 NRDSLLAVMKNHITTVMTHYKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLFYND 173 (320)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEE
T ss_pred chHHHHHHHHHHHHHHHHHcCCC--ceeEEeecccccCCCccccCcHHhhhccHHHHHHHHHHHHHhccCcEEEeec
Confidence 2 345667889999999999986 777999999975321 11111 267899999999999999888864
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=98.01 E-value=4e-05 Score=76.81 Aligned_cols=165 Identities=13% Similarity=0.129 Sum_probs=97.9
Q ss_pred HHHHHHHHhCCccEEEeCcc--cccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEE---EcCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVG--WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSATR 304 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~--~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIl---DlH~~pG~qng~~~sg~~ 304 (534)
....+.+-..-||.|= |-+ -|...+|.++ .| .++.+|++|++|+++||.|.- --|... +...+..
T Consensus 36 ~~~~~~~~~~~fn~~t-~eN~mKW~~iep~~G-~~---nf~~~D~~v~~a~~~gi~v~GH~lvW~~~~--~~~~~~~--- 105 (364)
T d1us3a2 36 NSREQAVVKKHFNHLT-AGNIMKMSYMQPTEG-NF---NFTNADAFVDWATENNMTVHGHALVWHSDY--QVPNFMK--- 105 (364)
T ss_dssp CHHHHHHHHHHCSEEE-ESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEEECCGG--GSCHHHH---
T ss_pred CHHHHHHHHHhCCeee-ecccCChHHhcCCCC-cc---CcHHHHHHHHHHHHCCCEEEEeecCCCccc--CCccccc---
Confidence 3444444455577774 322 2445566543 34 478899999999999999862 222210 0000000
Q ss_pred CCCCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC-------ChHHHH------HHHHHHHHHHHhcCC
Q 009475 305 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-------ALDTLK------SYYKAGYDAVRKYTS 370 (534)
Q Consensus 305 ~g~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~-------~~~~~~------~~~~~~~~aIR~~~p 370 (534)
..... +...+.+.++++.+++||++...|..||++|||..... ....+. .|+..+++.+|+.+|
T Consensus 106 --~~~~~~~~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~~Ar~~~p 183 (364)
T d1us3a2 106 --NWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADP 183 (364)
T ss_dssp --TCCSCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCT
T ss_pred --cCCccHHHHHHHHHHHHHHHHHhhccCCceEEEEEecccccCCCCcccccccchHHHHhCCchHHHHHHHHHHHHhcc
Confidence 00111 23445677899999999997667999999999964321 111122 378899999999999
Q ss_pred ceEEEEeCCC-CCCCh--hhh---h----cccCCCceEEEEEeecc
Q 009475 371 TAYVIMSNRL-GPADH--KEL---L----SFASGLSRVVIDVHYYN 406 (534)
Q Consensus 371 ~~~Iiv~~~~-~~~~~--~~~---~----~~~~~~~nvv~d~H~Y~ 406 (534)
+..+++.+.- ..... ..+ . .-..+.+.+-+..|.|.
T Consensus 184 ~a~l~~ndy~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~ 229 (364)
T d1us3a2 184 AVILYYNDYNIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCM 229 (364)
T ss_dssp TSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEES
T ss_pred ccceeeccccccccchhhhHHHHHHHHHHhCCCccccceeeeeccC
Confidence 9988886421 11111 111 1 11134677888888874
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=97.87 E-value=1e-05 Score=79.22 Aligned_cols=128 Identities=17% Similarity=0.276 Sum_probs=85.2
Q ss_pred HHHHHHhCCccEEEeCcc--cccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 232 DFKFLSSNGINAVRIPVG--WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 232 d~~~ia~~G~N~VRIPv~--~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
..+.+...-||.+= |-+ -|...+|.++ .| .++.+|++|++|+++||.|.--..-.+. + .+.
T Consensus 28 ~y~~~~~~~fn~~t-~~n~~kW~~~ep~~g-~~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~-~-----------~p~ 90 (302)
T d1v0la_ 28 TYTSIAGREFNMVT-AENEMKIDATEPQRG-QF---NFSSADRVYNWAVQNGKQVRGHTLAWHS-Q-----------QPG 90 (302)
T ss_dssp HHHHHHHHHCSEEE-ESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSS-S-----------CCH
T ss_pred HHHHHHHhhCCeee-ecccCchhhhCCCCC-cC---ChHHHHHHHHHHHHCCCEEEEeccccch-h-----------ccc
Confidence 34444445578874 332 2555566543 34 3688999999999999998542211111 1 112
Q ss_pred CC-----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC-----C---hHHHHHHHHHHHHHHHhcCCceEEEE
Q 009475 310 WG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-----A---LDTLKSYYKAGYDAVRKYTSTAYVIM 376 (534)
Q Consensus 310 W~-----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~-----~---~~~~~~~~~~~~~aIR~~~p~~~Iiv 376 (534)
|. +...+.+.++.+.+++||++. |..||++|||..... + .....++++.+++++|+++|+..|++
T Consensus 91 w~~~~~~~~~~~~~~~~i~~~~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~i~~a~~~ar~~dP~a~l~~ 168 (302)
T d1v0la_ 91 WMQSLSGSALRQAMIDHINGVMAHYKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKLCY 168 (302)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSEEEE
T ss_pred cccccCcHHHHHHHHHHHHHHHhhcCCC--ceEEEEecccccCCCCccccCcccccchHHHHHHHHHHHHHhCCCCEEee
Confidence 22 345567788999999999985 677999999964221 1 11233688999999999999999888
Q ss_pred eC
Q 009475 377 SN 378 (534)
Q Consensus 377 ~~ 378 (534)
.+
T Consensus 169 n~ 170 (302)
T d1v0la_ 169 ND 170 (302)
T ss_dssp EE
T ss_pred cC
Confidence 64
|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
Probab=97.64 E-value=4.1e-05 Score=74.76 Aligned_cols=148 Identities=16% Similarity=0.243 Sum_probs=93.3
Q ss_pred CccEEEeCccc--ccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC------
Q 009475 240 GINAVRIPVGW--WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG------ 311 (534)
Q Consensus 240 G~N~VRIPv~~--w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~------ 311 (534)
-||.+= |-+- |...+|.++ .+ .++.+|++|++|+++||.|.- |..-- ++ ..+.|.
T Consensus 36 ~fn~~t-~en~~kW~~iEp~~G-~~---~~~~~D~~v~~a~~~gl~v~g--H~lvW------~~----~~P~w~~~~~~~ 98 (301)
T d1ta3b_ 36 QFGVIT-PENSMKWDALEPSQG-NF---GWSGADYLVDYATQHNKKVRG--HTLVW------HS----QLPSWVSSIGDA 98 (301)
T ss_dssp HCSEEE-ESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--EEEEC------SS----SCCHHHHTCCCH
T ss_pred hCCeec-ccccCcchhhCCCCC-cC---CcHHHHHHHHHHHHCCCEEEE--ecccc------Cc----cCchhhhccccH
Confidence 377775 4332 555666554 33 468899999999999999764 43210 00 012222
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC---ChHHH----HHHHHHHHHHHHhcCCceEEEEeC-C-CCC
Q 009475 312 DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTL----KSYYKAGYDAVRKYTSTAYVIMSN-R-LGP 382 (534)
Q Consensus 312 ~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~---~~~~~----~~~~~~~~~aIR~~~p~~~Iiv~~-~-~~~ 382 (534)
+...+.+.+.++.+++||++. |-.||++|||..... ..... ..++..+++++|+.+|+..+++.+ . ...
T Consensus 99 ~~~~~~~~~~I~~v~~rY~g~--i~~WDVvNEp~~~~~~~~~~~~~~~~g~~~~~~af~~A~~~dP~a~l~~nd~~~~~~ 176 (301)
T d1ta3b_ 99 NTLRSVMTNHINEVVGRYKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKLYINDYNLDSA 176 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESCCCCT
T ss_pred HHHHHHHHHHHHHHHHhcCCC--cceEEeecccccCCCCcccchhhhccchHHHHHHHHHHHHhCcCceeeecccccccc
Confidence 234566788999999999985 678999999964221 11111 368999999999999999888864 2 211
Q ss_pred CCh--hhhhc-------ccCCCceEEEEEeecc
Q 009475 383 ADH--KELLS-------FASGLSRVVIDVHYYN 406 (534)
Q Consensus 383 ~~~--~~~~~-------~~~~~~nvv~d~H~Y~ 406 (534)
... ..+.. -..+.+.|.+..|+..
T Consensus 177 ~~~~~~~~~~~v~~l~~~g~~idgIG~Q~H~~~ 209 (301)
T d1ta3b_ 177 SYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSS 209 (301)
T ss_dssp TSHHHHHHHHHHHHHHHTTCCCCEEEECCEECT
T ss_pred chHHHHHHHHHHHHHHhCCCCcceeeeeeecCC
Confidence 111 11111 1135677888888753
|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Thermoascus aurantiacus [TaxId: 5087]
Probab=97.58 E-value=4.7e-05 Score=74.52 Aligned_cols=110 Identities=20% Similarity=0.368 Sum_probs=74.0
Q ss_pred ccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC------hhhHHHHHHHHHH
Q 009475 251 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG------DSNVADTVAVIDF 324 (534)
Q Consensus 251 w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~------~~~~~~~~~~w~~ 324 (534)
|...+|.++ .+ .++.+|+++++|+++||.|.- |..- +++ ..|.|. +...+.+.+.++.
T Consensus 51 W~~~ep~~G-~~---~~~~~D~~v~~a~~~gi~vrG--H~lv------W~~----~~P~W~~~~~~~~~~~~~~~~~i~~ 114 (303)
T d1i1wa_ 51 WDATEPSQG-NF---NFAGADYLVNWAQQNGKLIRG--HTLV------WHS----QLPSWVSSITDKNTLTNVMKNHITT 114 (303)
T ss_dssp HHHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEE--EEEE------CST----TCCHHHHTCCCHHHHHHHHHHHHHH
T ss_pred chhhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--eeee------ecC----cCchhhhcccccHHHHHHHHHHHHH
Confidence 445566543 33 468999999999999999742 2211 010 112232 2234566779999
Q ss_pred HHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHhcCCceEEEEeC
Q 009475 325 LAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 325 lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
+++||++. |..||++|||...... ...| .+|++.+++.+|+++|+..+++.+
T Consensus 115 v~~rY~g~--i~~WdVvNE~~~~~~~~r~~~~~~~~g~d~i~~af~~Ar~~dP~a~L~~Nd 173 (303)
T d1i1wa_ 115 LMTRYKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYIND 173 (303)
T ss_dssp HHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHcCCC--CchhhhcccccCCCcccccCchhhcccHHHHHHHHHHHHHhCCCCEEEeec
Confidence 99999985 7789999999753211 1111 257889999999999999999864
|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glycosyl hydrolase family 5 xylanase, catalytic domain species: Erwinia chrysanthemi [TaxId: 556]
Probab=97.37 E-value=0.0036 Score=59.79 Aligned_cols=108 Identities=19% Similarity=0.131 Sum_probs=70.9
Q ss_pred hCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCC--CCCCCCCCCCCCCCCChhhH
Q 009475 238 SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ--NGNEHSATRDGFQEWGDSNV 315 (534)
Q Consensus 238 ~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~q--ng~~~sg~~~g~~~W~~~~~ 315 (534)
.+|++.+|+||+.- . ..+...-.+++.|.++|++|+...-.+|+.. |+....| +. -.++..
T Consensus 31 g~g~s~~R~~id~~------~------~~~~~~i~~~k~A~~~~~ki~~spWSpP~wMK~n~~~~~g---g~--L~~~~~ 93 (277)
T d1nofa2 31 QIGLSIMRVRIDPD------S------SKWNIQLPSARQAVSLGAKIMATPWSPPAYMKSNNSLING---GR--LLPANY 93 (277)
T ss_dssp CCCCCEEEEECCSS------G------GGGGGGHHHHHHHHHTTCEEEEECSCCCGGGBTTSSSBSC---CB--BCGGGH
T ss_pred CCcceEEEeeeCCC------c------chhhHhhHHHHHHHHcCCcEEEcCCCCcHHHcCCCCcccC---Cc--cCHHHH
Confidence 58999999999531 0 1122234566678899999999999998753 2211111 10 115677
Q ss_pred HHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCCC------CChHHHHHHHHHHH
Q 009475 316 ADTVAVIDFLAARYANRP-SLAAIELINEPLAPG------VALDTLKSYYKAGY 362 (534)
Q Consensus 316 ~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~~------~~~~~~~~~~~~~~ 362 (534)
+.+.+++....+.|+.+. .|-++.+.|||.... .+.+.+.++++...
T Consensus 94 ~~~A~Yl~~~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~~~~~~~~~i~~~~ 147 (277)
T d1nofa2 94 SAYTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQG 147 (277)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEeecCCCCCCCCCCCcccCHHHHHHHHHHhh
Confidence 778888888888888653 577899999998632 23466777766554
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=97.22 E-value=0.00054 Score=68.08 Aligned_cols=161 Identities=14% Similarity=0.183 Sum_probs=96.0
Q ss_pred HHHHHhCCccEEEeCccc--ccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE---EEEcCCC-CCCCCCCCCCCCCCC
Q 009475 233 FKFLSSNGINAVRIPVGW--WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV---IVDLHAA-PGSQNGNEHSATRDG 306 (534)
Q Consensus 233 ~~~ia~~G~N~VRIPv~~--w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V---IlDlH~~-pG~qng~~~sg~~~g 306 (534)
++.+-..-||+|= |-+- |...+|.++ .| .++..|++|++|+++||.| .|-.|.. |... .....+
T Consensus 28 y~~~~~~~Fn~~t-~eN~~KW~~ie~~~G-~~---~~~~~D~~v~~a~~~gi~vrGH~LvW~~~~P~w~-----~~~~~~ 97 (350)
T d1ur1a_ 28 LNTLIAKEFNSIT-PENCMKWGVLRDAQG-QW---NWKDADAFVAFGTKHNLHMVGHTLVWHSQIHDEV-----FKNADG 97 (350)
T ss_dssp HHHHHHHHCSEEE-ESSTTSHHHHBCTTC-CB---CCHHHHHHHHHHHHTTCEEEEEEEECSSSSCGGG-----TBCTTS
T ss_pred HHHHHHHHcCeec-ccccCchhhhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEEEEEEEcccccccc-----cccCCc
Confidence 3444444567773 4331 444555443 44 3688999999999999987 3445532 2110 000000
Q ss_pred CCCCC-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--hHHH-----HHHHHHHHHHHHhcCCceEEEEeC
Q 009475 307 FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 307 ~~~W~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Iiv~~ 378 (534)
. ... +...+...+.++.++.||++. |..||++|||...... ...| ..|+.+++++.|+++|+..+++.+
T Consensus 98 ~-~~~~~~l~~~~~~~I~~v~~ry~g~--i~~WDVvNE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~akL~~Nd 174 (350)
T d1ur1a_ 98 S-YISKAALQKKMEEHITTLAGRYKGK--LAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMYND 174 (350)
T ss_dssp C-BCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred c-ccCHHHHHHHHHHHHHHHHHhcCCc--ceEEEEecccccCCCCcccchhhhhcCcHHHHHHHHHHHhhCCCceEeecc
Confidence 0 111 233456778899999999875 6789999999753211 1111 357889999999999999888854
Q ss_pred C-CCCCC-hhhhhc-------ccCCCceEEEEEeecc
Q 009475 379 R-LGPAD-HKELLS-------FASGLSRVVIDVHYYN 406 (534)
Q Consensus 379 ~-~~~~~-~~~~~~-------~~~~~~nvv~d~H~Y~ 406 (534)
. ..... ...+.. -..+.+.|-+..|.+.
T Consensus 175 yn~~~~~k~~~~~~lv~~l~~~GvpiDgIGlQ~H~~~ 211 (350)
T d1ur1a_ 175 YNIERTGKREATVEMIERLQKRGMPIHGLGIQGHLGI 211 (350)
T ss_dssp SSTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEEES
T ss_pred cccccccccHHHHHHHHHHHhCCCCceEEEEeeeccC
Confidence 2 11111 112211 1135678888889864
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.22 E-value=0.0033 Score=62.53 Aligned_cols=131 Identities=15% Similarity=0.179 Sum_probs=83.2
Q ss_pred HHHHHHHHhCCccEEEeCccc------c-cccCCC---CCC---CC---CCchHHHHHHHHHHHHHCCCEEEEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGW------W-IANDPT---PPK---PF---VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~------w-~~~~~~---~~~---~~---~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG 293 (534)
.+-++.|++++...||.|=+- | ....|. ++. .+ ....+ -+++.+++|++.|...+|.+..-.
T Consensus 37 ~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~~w~~~~~~~~-G~~Ef~~~~~~~gaep~~~vn~g~- 114 (367)
T d1qw9a2 37 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEI-GLNEFMDWAKMVGAEVNMAVNLGT- 114 (367)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSS-CHHHHHHHHHHHTCEEEEEECCSS-
T ss_pred HHHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCccCCCCCCcCcCCC-CHHHHHHHHHHhCCeEEEEEeCCC-
Confidence 678889999999999999641 2 111121 110 00 01122 279999999999999999887421
Q ss_pred CCCCCCCCCCCCCCCCCChhhHHHHHHHH--------HHHHHHhcC-CC-eEEEEEeccCCCCC----CCChHHHHHHHH
Q 009475 294 SQNGNEHSATRDGFQEWGDSNVADTVAVI--------DFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYK 359 (534)
Q Consensus 294 ~qng~~~sg~~~g~~~W~~~~~~~~~~~w--------~~lA~ryk~-~~-~vlg~eL~NEP~~~----~~~~~~~~~~~~ 359 (534)
+ . ......++++. ..+-..... .| .|--|||-||+... ..+.+.+...++
T Consensus 115 --------~----~----~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~g~~~~g~~~~~~Y~~~~~ 178 (367)
T d1qw9a2 115 --------R----G----IDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIAC 178 (367)
T ss_dssp --------C----C----HHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHHH
T ss_pred --------c----c----HHHHHHHHHHHccCCCCHHHHHHHHcCCCCCCCceEEEeccccccccccCCCCHHHHHHHHH
Confidence 1 0 11122233322 222222211 23 58789999998753 245688889999
Q ss_pred HHHHHHHhcCCceEEEEeC
Q 009475 360 AGYDAVRKYTSTAYVIMSN 378 (534)
Q Consensus 360 ~~~~aIR~~~p~~~Iiv~~ 378 (534)
+..+++|+.+|+..|+..+
T Consensus 179 ~f~~amk~~dP~i~lia~g 197 (367)
T d1qw9a2 179 EAAKVMKWVDPTIELVVCG 197 (367)
T ss_dssp HHHHHHHHHCTTCEEEECC
T ss_pred HHHHHHhhcCCCeeEEEEe
Confidence 9999999999998777653
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=97.13 E-value=0.0048 Score=61.45 Aligned_cols=158 Identities=16% Similarity=0.164 Sum_probs=89.8
Q ss_pred CccEEEeCcc--cccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCC-CCCCCCCCCCCCCCCCC------
Q 009475 240 GINAVRIPVG--WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG-SQNGNEHSATRDGFQEW------ 310 (534)
Q Consensus 240 G~N~VRIPv~--~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG-~qng~~~sg~~~g~~~W------ 310 (534)
-||+| .|-+ -|...+|.++ .| .++..|++|++|+++||.|-- |..-. +|...+..-...+.+..
T Consensus 43 ~Fn~~-t~eN~mKW~~iep~~G-~~---n~~~aD~~v~~a~~ngi~vrG--H~LvW~~~~P~W~~~~~~~~~~~~~~~~~ 115 (371)
T d1r85a_ 43 HFNSI-VAENVMKPISIQPEEG-KF---NFEQADRIVKFAKANGMDIRF--HTLVWHSQVPQWFFLDKEGKPMVNETDPV 115 (371)
T ss_dssp HCSEE-EESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--ECSCCSTTCCGGGGBCTTSSBGGGCCCHH
T ss_pred hcCee-cccccCcchhhcCCCC-cc---CcHHHHHHHHHHHHCCCEEEE--eEEEeeccccccccccccccccccccccc
Confidence 58888 4533 2445566543 34 468899999999999999843 33211 12211110000111100
Q ss_pred C-----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--h----HHH-HHHHHHHHHHHHhc-CCceEEEEe
Q 009475 311 G-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--L----DTL-KSYYKAGYDAVRKY-TSTAYVIMS 377 (534)
Q Consensus 311 ~-----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~--~----~~~-~~~~~~~~~aIR~~-~p~~~Iiv~ 377 (534)
. +...+...+.++.+++||++. |..||++|||...... . +.+ ..|+..+++..|+. +|...+++.
T Consensus 116 ~~~~~~e~l~~~~~~~I~~v~~rY~g~--I~~WDVvNE~~~~~~~~r~~~~~~~~g~dyi~~af~~A~~~~~p~~~L~~N 193 (371)
T d1r85a_ 116 KREQNKQLLLKRLETHIKTIVERYKDD--IKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMN 193 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTT--CCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ccccCHHHHHHHHHHHHHHHHHHcCCC--ceEEEEEeecccCCCCcccCchhhccCcHHHHHHHHHHHHhcCCcceeeec
Confidence 0 112334567889999999984 7889999999753211 0 111 36788999999987 566666665
Q ss_pred CC--CCCCChhhhhc-------ccCCCceEEEEEeecc
Q 009475 378 NR--LGPADHKELLS-------FASGLSRVVIDVHYYN 406 (534)
Q Consensus 378 ~~--~~~~~~~~~~~-------~~~~~~nvv~d~H~Y~ 406 (534)
+. ........+.. -..+-+.|-+..|+..
T Consensus 194 dy~~~~~~k~~~~~~~v~~l~~~g~pidgIG~Q~H~~~ 231 (371)
T d1r85a_ 194 DYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQI 231 (371)
T ss_dssp ESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECS
T ss_pred cccccccchhHHHHHHHHHHHHCCCCcceeeccccccC
Confidence 31 11111111111 1134678888889764
|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Pseudomonas fluorescens [TaxId: 294]
Probab=97.09 E-value=0.00092 Score=66.23 Aligned_cols=154 Identities=18% Similarity=0.196 Sum_probs=95.8
Q ss_pred HHHHHHHhCCccEEEeCccc--ccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEE---EEcCCCCCCCCCCCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRIPVGW--WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSATRD 305 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~~--w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VI---lDlH~~pG~qng~~~sg~~~ 305 (534)
...+.|-..-||.|= |-+- |...++. ..| .++..|+++++|+++||.|- |=-|. ..|.
T Consensus 27 ~~~~~~~~~~Fn~~t-~eN~~Kw~~~~~~--g~~---n~~~~D~~v~~a~~ng~~vrGH~LvW~~--~~~~--------- 89 (346)
T d1w32a_ 27 SARQNIVRAEFNQIT-AENIMKMSYMYSG--SNF---SFTNSDRLVSWAAQNGQTVHGHALVWHP--SYQL--------- 89 (346)
T ss_dssp HHHHHHHHHHCSEEE-ESSTTSGGGGEET--TEE---CCHHHHHHHHHHHHTTCEEEEEEEECCC--GGGC---------
T ss_pred HHHHHHHHHhCCeec-ccccCCceeecCC--CCC---CchHHHHHHHHHHHCCCEEEEEeeecCC--cccC---------
Confidence 344444445567774 5432 3333332 123 46789999999999999984 23342 1121
Q ss_pred CCCCCC----hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC-------------ChHHH-----HHHHHHHHH
Q 009475 306 GFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-------------ALDTL-----KSYYKAGYD 363 (534)
Q Consensus 306 g~~~W~----~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~-------------~~~~~-----~~~~~~~~~ 363 (534)
|.|. +...+.+.+.++.+++||++. |-.||++|||..... ...-+ ..|++.+++
T Consensus 90 --P~w~~~~~~~~~~~~~~~I~~v~~ry~g~--i~~WDVvNE~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~~aF~ 165 (346)
T d1w32a_ 90 --PNWASDSNANFRQDFARHIDTVAAHFAGQ--VKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFR 165 (346)
T ss_dssp --CTTCSTTCTTHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHH
T ss_pred --cccccCCcHHHHHHHHHHHHHHHHhhCCc--ceEEEEEeeeccccccCccccccccccccchhhhhccChHHHHHHHH
Confidence 2332 244567888999999999985 778999999975321 00112 267899999
Q ss_pred HHHhcCCceEEEEeCCC-CCCC--hhhhhc-------ccCCCceEEEEEeec
Q 009475 364 AVRKYTSTAYVIMSNRL-GPAD--HKELLS-------FASGLSRVVIDVHYY 405 (534)
Q Consensus 364 aIR~~~p~~~Iiv~~~~-~~~~--~~~~~~-------~~~~~~nvv~d~H~Y 405 (534)
..|+++|+..+++.+.- .... ...++. -..+-+.|-+..|..
T Consensus 166 ~Ar~~dP~a~L~~Ndyn~~~~~~k~~~~~~lv~~L~~~g~pIDgIG~Q~H~~ 217 (346)
T d1w32a_ 166 RARAADPTAELYYNDFNTEENGAKTTALVNLVQRLLNNGVPIDGVGFQMHVM 217 (346)
T ss_dssp HHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEE
T ss_pred HHHHhCCCCEEEeccCCcccCcHHHHHHHHHHHHHHhcCCccceEEEEeecc
Confidence 99999999998886421 1111 112221 124568899999975
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=96.80 E-value=0.00066 Score=68.07 Aligned_cols=60 Identities=18% Similarity=0.346 Sum_probs=51.0
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCE--EEEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~--VIlDlH~~pG 293 (534)
++|++.||++|+|.|+|+|- |...++..+..| .++.+|++++.++++||+ ||+..|...|
T Consensus 32 ~~~L~~LK~aGV~gV~vdVw-WGivE~~~Pg~Y---dws~yd~l~~mv~~~GLKi~vvmsfH~cGg 93 (417)
T d1vema2 32 ENDLRWAKQNGFYAITVDFW-WGDMEKNGDQQF---DFSYAQRFAQSVKNAGMKMIPIISTHQCGG 93 (417)
T ss_dssp HHHHHHHHHTTEEEEEEEEE-HHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBSS
T ss_pred HHHHHHHHHcCCCEEEEeee-eeeeecCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 89999999999999999995 788887655577 478999999999999987 5888887543
|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glucosylceramidase, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.027 Score=55.24 Aligned_cols=134 Identities=19% Similarity=0.181 Sum_probs=77.8
Q ss_pred HhCCccEEEeCcccccc------cCCCCCC----CCC--CchHHHHHHHHHHHHH---CCCEEEEEcCCCCCCC--CCCC
Q 009475 237 SSNGINAVRIPVGWWIA------NDPTPPK----PFV--GGSSKVLDNAFDWAEK---YGVKVIVDLHAAPGSQ--NGNE 299 (534)
Q Consensus 237 a~~G~N~VRIPv~~w~~------~~~~~~~----~~~--~~~l~~ld~~v~~a~~---~Gl~VIlDlH~~pG~q--ng~~ 299 (534)
+.+|++.+|+||+-=.+ ....++. .+. ...-+....++..|++ .+|+|+...-.+|+.. |+..
T Consensus 35 ~Glgls~~R~~IG~~d~~~~~yt~~d~~~d~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~i~aspWSpP~wMk~n~~~ 114 (354)
T d2nt0a2 35 EGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAV 114 (354)
T ss_dssp TTTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCSS
T ss_pred CCceeEEEEEeecCCCCCCCCCcccCCCCCccccCCCcchhhhhhHHHHHHHHHHhcCCCeEEEEcCCCCchhhhcCCcc
Confidence 35999999999962111 0011111 111 1111222335555544 5799999988888753 2211
Q ss_pred CCCCC-CCCCCCChhhHHHHHHHHHHHHHHhcCCC-eEEEEEeccCCCCC----------CCChHHHHHHHHH-HHHHHH
Q 009475 300 HSATR-DGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP----------GVALDTLKSYYKA-GYDAVR 366 (534)
Q Consensus 300 ~sg~~-~g~~~W~~~~~~~~~~~w~~lA~ryk~~~-~vlg~eL~NEP~~~----------~~~~~~~~~~~~~-~~~aIR 366 (534)
..+.. .+.. .+...+.+.+++.++++.|+.+. .|-++.+.|||... ..+.+...++..+ +..+++
T Consensus 115 ~~~~~~~~~l--~~~~~~~yA~Yl~~~v~~y~~~Gi~i~~isp~NEP~~~~~~~~~~~~~~~t~~~~~~fi~~~L~~~l~ 192 (354)
T d2nt0a2 115 NGKGSLKGQP--GDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLA 192 (354)
T ss_dssp SSSCBBSSCT--TSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHH
T ss_pred cCCCCcCCcc--chhHHHHHHHHHHHHHHHHHHcCCCceEeccCcCcCcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 11111 0110 14567778888888888888764 57789999999631 1346778888865 777888
Q ss_pred hcCCce
Q 009475 367 KYTSTA 372 (534)
Q Consensus 367 ~~~p~~ 372 (534)
+.+...
T Consensus 193 ~~g~~~ 198 (354)
T d2nt0a2 193 NSTHHN 198 (354)
T ss_dssp TSTTTT
T ss_pred hcCCCc
Confidence 876543
|
| >d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.71 E-value=0.0097 Score=48.83 Aligned_cols=96 Identities=17% Similarity=0.304 Sum_probs=72.1
Q ss_pred eeEEeeeeceeEEEe-ecCCCceEEeccCCCCCcc-eEEEEEecCceEEEEeeCCcEEEeecCCCCceEEEeecCCCCCc
Q 009475 67 QVQFMSTKFQKYIAA-ESGGGTIVVANRTSASGWE-TFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSE 144 (534)
Q Consensus 67 ~~~~~s~~~~~~~~a-~~~g~~~~~anr~~~~~we-tf~~~~~~~~~~~~~~~n~~~v~~~~~g~~~~~~a~~~~~~~~E 144 (534)
||.|+|+...+|+=. ++.+ ..|.++++..=+=| .|.|..- ++.+.|+++|++|+.-+ | .|+. .|.+-+
T Consensus 1 Qvnl~Sv~rkrYahls~~~~-~ei~vD~~vPWG~d~litL~f~-~grY~L~t~~~ryL~~~----G-~Lv~---~~~~~t 70 (119)
T d1dfca2 1 QVNIYSVTRKRYAHLSARPA-DEIAVDRDVPWGVDSLITLAFQ-DQRYSVQTADHRFLRHD----G-RLVA---RPEPAT 70 (119)
T ss_dssp EEEEEETTTCCEEEECSTTS-SSEEEEESSCCTTTTCEEEEEC-SSSEEEEETTSCEECTT----S-CEES---SCCGGG
T ss_pred CceEEcccceeEEEeCCCCC-CeEEEcCCCCcccCcEEEEEEc-CCEEEEEeCCCCeECCC----C-cCcc---cCCCCc
Confidence 789999999999954 3322 37788886652223 4677664 68999999999999964 3 3664 556678
Q ss_pred eEEEEEeCCCCceEEEEecCCceEEecccce
Q 009475 145 TFQIVRKDGDSSRVRLSASNGMFIQAISETR 175 (534)
Q Consensus 145 tF~ivr~~~~~~~v~i~~~nG~~Lq~~g~~~ 175 (534)
-|.+.-.++ .|.++..+|.||...|.+-
T Consensus 71 ~Ftle~~~G---~vA~rD~~G~yL~p~G~~g 98 (119)
T d1dfca2 71 GYTLEFRSG---KVAFRDCEGRYLAPSGPSG 98 (119)
T ss_dssp CEEEEECSS---EEEEEESSSCBEEECSSSC
T ss_pred EEEEEEeCC---eEEEEcCCCCEEeccCCCc
Confidence 899877753 4999999999999987543
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=95.84 E-value=0.0053 Score=59.28 Aligned_cols=59 Identities=24% Similarity=0.243 Sum_probs=40.4
Q ss_pred HHHHHHHHhCCccEEEe-Ccc---------cccc--cCCCCC---CCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRI-PVG---------WWIA--NDPTPP---KPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~---------~w~~--~~~~~~---~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+-++.||++|+++|-| |+. ||.. ..+..+ ...++ +..+.|+++|+.|.++||+||||+
T Consensus 26 ~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~~efk~lV~~~H~~GI~VilDv 101 (390)
T d1ud2a2 26 HDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDV 101 (390)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCCCCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 34589999999999998 442 1100 000000 01111 568999999999999999999998
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=95.82 E-value=0.034 Score=46.70 Aligned_cols=100 Identities=15% Similarity=0.114 Sum_probs=66.3
Q ss_pred eEEeeeeceeEEEe-ecCCCceEEeccCCCCCcceEEEEEecCceEEEEee-CCcEEEeecCCCCceEEEeecCCCCCce
Q 009475 68 VQFMSTKFQKYIAA-ESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAGYSET 145 (534)
Q Consensus 68 ~~~~s~~~~~~~~a-~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~-n~~~v~~~~~g~~~~~~a~~~~~~~~Et 145 (534)
-.||+...||||.. +++|+..+..--..-+.=.++++... +|.+.|+.. .|+++.+++.. |..++.-.........
T Consensus 3 Y~I~N~~sGk~L~v~~~~~~~~~~~~~~~~~~~qqW~~~~~-~g~y~i~n~~sg~~l~~~~~s-g~~~~~~~~~~~~~qq 80 (131)
T d1upsa2 3 YLIRNRQTGKFLYIEENNDKVSYGDITLKNEKNAKWSKEYR-DGYTLLKNNETGEYLNIENQT-GYIEHGKVPKTWWSAQ 80 (131)
T ss_dssp EEEEETTTCCEEECCTTCSSCEEECCCTTTTGGGCEEEEEE-TTEEEEEETTTCCEEECTTCC-SBCEEECCCTTCGGGC
T ss_pred EEEEEccCCcEEEEeCCCCcEEEeccccCCCcccEEEEEeC-CCEEEEEECCCCcEEEccCCC-CceEEEccCCCChhHe
Confidence 35888999999994 44555554322211222335566666 688999988 79999998753 4446666666667888
Q ss_pred EEEEEeCCCCceEEEEe--cCCceEEecc
Q 009475 146 FQIVRKDGDSSRVRLSA--SNGMFIQAIS 172 (534)
Q Consensus 146 F~ivr~~~~~~~v~i~~--~nG~~Lq~~g 172 (534)
|.|+..++ . ++|+. ..|.+|++++
T Consensus 81 W~l~~~gg-~--~~i~n~~~s~~~L~v~~ 106 (131)
T d1upsa2 81 WSEVPVDG-Y--TRFVNRWKPNMSIHTES 106 (131)
T ss_dssp EEEEEETT-E--EEEEESSSTTCEEECTT
T ss_pred EEEEecCC-c--EEEEEeccCCeEEEEec
Confidence 99987653 3 44443 4588998875
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=95.71 E-value=0.0047 Score=61.62 Aligned_cols=140 Identities=14% Similarity=0.177 Sum_probs=75.7
Q ss_pred HHHHHHHhCCccEEEe-Cccccccc-----CCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCCCCCCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIAN-----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNE 299 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~-----~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG~qng~~ 299 (534)
+-++.|+++|+|+|-| ||.-.... ++......++ +..+.|+++|+.|+++||+||+|+ |..+.+. ..+
T Consensus 38 ~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G~~~d~~~lv~~aH~~gi~VilD~V~NH~~~~~~-~~~ 116 (420)
T d2bhua3 38 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGN-YLS 116 (420)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSC-CHH
T ss_pred HhHHHHHHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHhccccccccccccccCCCCc-ccc
Confidence 3478999999999997 55211100 0000000111 579999999999999999999997 5544221 000
Q ss_pred CCCCC----CCCCCC------C-hhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhc
Q 009475 300 HSATR----DGFQEW------G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKY 368 (534)
Q Consensus 300 ~sg~~----~g~~~W------~-~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~ 368 (534)
..... .....| . +..++.++++.+...+.|+=+ . +=+|..+--. . +....+.+++.+++++.
T Consensus 117 ~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~GVD-G-fR~D~~~~l~--~---~~~~~~~~~~~~~~~~~ 189 (420)
T d2bhua3 117 SYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFD-G-LRLDATPYMT--D---DSETHILTELAQEIHEL 189 (420)
T ss_dssp HHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCS-E-EEETTGGGCC--C---CSSSCHHHHHHHHHHTT
T ss_pred ccccccccccccccccccccccChHHHHHHHHHhheeeeccccc-E-EEEeeeeeec--c---ccccccHHHHHHHHHhh
Confidence 00000 000112 1 455666666666655544321 1 1133222110 0 01123556778889999
Q ss_pred CCceEEEEeC
Q 009475 369 TSTAYVIMSN 378 (534)
Q Consensus 369 ~p~~~Iiv~~ 378 (534)
+|+.+++.+.
T Consensus 190 ~p~~~~i~E~ 199 (420)
T d2bhua3 190 GGTHLLLAED 199 (420)
T ss_dssp CSCCEEEEEC
T ss_pred cCCceeeecc
Confidence 9998877653
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=95.47 E-value=0.0045 Score=60.06 Aligned_cols=59 Identities=22% Similarity=0.330 Sum_probs=40.4
Q ss_pred CHHHHHHHHhCCccEEEe-Ccc------cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 229 TDEDFKFLSSNGINAVRI-PVG------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 229 te~d~~~ia~~G~N~VRI-Pv~------~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+++-+..|+++|+|+|-| ||. +|- .++......++ +..+.|+++|+.|+++||+||||+
T Consensus 43 ~~klidyl~~LGv~~iwl~Pi~~~~~~~~hG-Y~~~d~~~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~ 110 (396)
T d1m7xa3 43 ADQLVPYAKWMGFTHLELLPINEHPFDGSWG-YQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDW 110 (396)
T ss_dssp HHHHHHHHHHTTCSEEEESCCEECSCGGGTT-SSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCC-cCcCcCCCcCcccCCHHHHHHHHHHHhhhhhhhhhcc
Confidence 355569999999999999 441 000 00000000112 578999999999999999999998
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.41 E-value=0.061 Score=52.24 Aligned_cols=56 Identities=21% Similarity=0.440 Sum_probs=39.6
Q ss_pred HHHHHHHhCCccEEEe-Ccccccc---cCCCC----CCCCCCchHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIA---NDPTP----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~---~~~~~----~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+|+|-| ||.-... ..+.. ...+ +..+.|+++|+.|+++||+||+|+
T Consensus 57 ~kldyl~~LGv~~i~L~Pi~~~~~~~gy~~~d~~~vd~~~--Gt~~~~~~lv~~aH~~Gi~VilD~ 120 (382)
T d1j0ha3 57 DHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHF--GDKETLKTLIDRCHEKGIRVMLDA 120 (382)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTT--CCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhHHHHHHcCCCEEEeCCCCcCCcccCCCcccccccCCCC--CCHHHHHHHHHHhhhccceEEEEe
Confidence 4578999999999997 6621000 00000 0011 578999999999999999999998
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=95.38 E-value=0.1 Score=50.32 Aligned_cols=57 Identities=25% Similarity=0.355 Sum_probs=39.6
Q ss_pred HHHHHHHhCCccEEEe-Ccccccc----cCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIA----NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~----~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+.++.|+++|+|+|-| |+. ... ..+......++ +..+.|+++|+.|+++||+||+|+
T Consensus 55 ~kLdylk~LGv~~i~l~Pi~-~~~~~~gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~ 118 (382)
T d1ea9c3 55 DHLDHLSKLGVNAVYFTPLF-KATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDA 118 (382)
T ss_dssp HTHHHHHHHTCSEEEECCCS-SCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEEC
T ss_pred HhhHHHHhCCCCEEEeCCCc-cCCCCCCCCcccccccccccCCHHHHHHHHHHHHhhcceEEEee
Confidence 4578999999999997 331 100 00110011111 578999999999999999999998
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=95.36 E-value=0.042 Score=53.39 Aligned_cols=58 Identities=21% Similarity=0.284 Sum_probs=39.8
Q ss_pred HHHHHHHhCCccEEEe-Cccccc---ccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWI---ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~---~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|-| ||.-.. ...+......++ +..+.++++|+.|.++||+||+|+
T Consensus 57 ~kLdyl~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~ 120 (382)
T d1wzla3 57 DRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDA 120 (382)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HhhHHHHHCCCCEEEECCcCCCCcccCCccccccccccCCCCHHHHHHHHHHHHhcccceEeee
Confidence 4578999999999997 662100 000100000011 578999999999999999999996
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.27 E-value=0.013 Score=57.75 Aligned_cols=59 Identities=24% Similarity=0.218 Sum_probs=40.6
Q ss_pred HHHHHHHHhCCccEEEeCcccccc------------cCCCCC---CCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIA------------NDPTPP---KPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~------------~~~~~~---~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
++.++.||++|+|+|-|+=-+... .+..+. ...++ |..+.|+++|+.|+++||+||+|+
T Consensus 27 ~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~df~~LV~~aH~~GIkVIlDv 102 (393)
T d1hvxa2 27 ANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (393)
T ss_dssp HHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 567899999999999983211110 000000 00111 568999999999999999999997
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=95.26 E-value=0.017 Score=55.65 Aligned_cols=63 Identities=27% Similarity=0.325 Sum_probs=44.4
Q ss_pred HHHHHHHHhCCccEEEeCccccccc--------------CCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIAN--------------DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HA 290 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~--------------~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~ 290 (534)
.+.++.||++|+++|=|+-.+.... ++..- ..++ +..+.|+++|+.|+++||+||+|+ |.
T Consensus 40 ~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy-~vd~~~Gt~~df~~LV~~aH~~GI~VIlD~V~NH~ 118 (357)
T d1gcya2 40 RQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDF-NKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHM 118 (357)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSS-CSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhc-ccCccCCCHHHHHHHHHHHHhcCCeEEEEEecccc
Confidence 4568999999999999964332111 11000 1111 578999999999999999999998 65
Q ss_pred CCC
Q 009475 291 APG 293 (534)
Q Consensus 291 ~pG 293 (534)
.++
T Consensus 119 ~~~ 121 (357)
T d1gcya2 119 NRG 121 (357)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=95.18 E-value=0.01 Score=57.73 Aligned_cols=65 Identities=25% Similarity=0.501 Sum_probs=45.5
Q ss_pred CCHHHHHHHHhCCccEEEeCcc--------cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCCC
Q 009475 228 ITDEDFKFLSSNGINAVRIPVG--------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPG 293 (534)
Q Consensus 228 ite~d~~~ia~~G~N~VRIPv~--------~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~pG 293 (534)
|.++-.+.|+++|+++|=||=. ||...++.. ...++ |..+.|+++|+.|+++||+||||+ |..++
T Consensus 16 i~~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~d-y~vd~~~Gt~~dfk~LV~~aH~~GI~VilDvV~NH~~~~ 93 (354)
T d1g94a2 16 VAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVS-YELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAG 93 (354)
T ss_dssp HHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSC-SCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEECSEECSS
T ss_pred HHHHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCc-ceeCCCCCCHHHHHHHHHHHhccCceeEEEeeccccccc
Confidence 4444456799999999999532 222333322 12222 579999999999999999999998 65543
|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=95.09 E-value=0.046 Score=54.82 Aligned_cols=60 Identities=22% Similarity=0.531 Sum_probs=49.9
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG 293 (534)
+..++.||++|+.-|=++| ||...+...+..| .++..+++++.+++.|||+ |+.+|...|
T Consensus 31 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 92 (490)
T d1wdpa1 31 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQY---DWRAYRSLLQLVQECGLTLQAIMSFHQCGG 92 (490)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCcc---ChHHHHHHHHHHHHcCCeEEEEEeecccCC
Confidence 6899999999999999999 7777776656677 4788999999999999994 567787654
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=94.90 E-value=0.11 Score=50.66 Aligned_cols=62 Identities=27% Similarity=0.446 Sum_probs=42.9
Q ss_pred HHHHHHHhCCccEEEe-Cccccc-----ccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWI-----ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~-----~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
+.++.|+++|+|+|-| ||.-.. ..++......++ +..+.|+++|+.|.++||+||||+ |..+
T Consensus 33 ~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dlk~lv~~~h~~gi~VilD~V~NH~s~ 105 (400)
T d1eh9a3 33 RKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGP 105 (400)
T ss_dssp HTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHHHHHHHHHHHTTCEEEEEECCSCCCS
T ss_pred HHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCcccCCHHHHHHHHHHHHhcCCceeeecccccccC
Confidence 4588999999999999 552100 001111111122 678999999999999999999998 6554
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=94.86 E-value=0.016 Score=56.54 Aligned_cols=58 Identities=28% Similarity=0.318 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCccEEEeC-cccccc-------cCCCCC---------CCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRIP-VGWWIA-------NDPTPP---------KPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIP-v~~w~~-------~~~~~~---------~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+.++.||++|+|+|=|+ |. ... .++... ...++ +..+.|+++|+.|+++||+||||+
T Consensus 31 ~~kLdylk~LGv~~Iwl~Pv~-~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d~~~LV~~aH~~GikVIlD~ 107 (361)
T d1mxga2 31 RSKIPEWYEAGISAIWLPPPS-KGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADV 107 (361)
T ss_dssp HHHHHHHHHHTCCEEECCCCS-EETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCcCe-eCCCCCCCCCCCcccccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 567899999999999984 42 110 000000 01122 468999999999999999999998
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=94.67 E-value=0.049 Score=54.77 Aligned_cols=60 Identities=25% Similarity=0.564 Sum_probs=49.2
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCE--EEEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~--VIlDlH~~pG 293 (534)
+..++.||++|+.-|=++| ||...+...+..| .+...+++++.+++.||| ||+.+|...|
T Consensus 30 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 91 (500)
T d1b1ya_ 30 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAY---DWSAYKQLFELVQKAGLKLQAIMSFHQCGG 91 (500)
T ss_dssp HHHHHHHHHTTCCEEEEEE-ETTTGGGGSTTCC---CCHHHHHHHHHHHHHTCEEEEEEECSCBSS
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEeecccCC
Confidence 6799999999999999999 6777666555677 488899999999999998 5677886543
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=94.64 E-value=0.011 Score=58.41 Aligned_cols=58 Identities=24% Similarity=0.227 Sum_probs=39.0
Q ss_pred HHHH--HHHhCCccEEEe-Cccccc----------------ccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFK--FLSSNGINAVRI-PVGWWI----------------ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~--~ia~~G~N~VRI-Pv~~w~----------------~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++ .|+++|+|+|-| |+.-.. ..++..-...++ +..+.|+++|+.|.++||+||||+
T Consensus 59 ~kLd~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi~VilD~ 137 (406)
T d3bmva4 59 NKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDF 137 (406)
T ss_dssp HHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhcCHHHHHHcCCCEEEECCcccccccccCCCCCCCChhhcCcccccccccCcccccHHHHHHHHHHHHhccccceeee
Confidence 4455 799999999999 652100 000000000011 578999999999999999999998
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=94.49 E-value=0.023 Score=55.94 Aligned_cols=58 Identities=26% Similarity=0.247 Sum_probs=40.6
Q ss_pred HHHHHHHHhCCccEEEe-CcccccccCCCCC----C-----------CCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRI-PVGWWIANDPTPP----K-----------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~w~~~~~~~~----~-----------~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+.++.|+++|+++|-| |+. -.......+ . ..++ |..+.|+++|+.|+++||+||+|+
T Consensus 24 ~~kLdylk~LGvtaI~L~Pi~-~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~df~~Lv~~~H~~Gi~VilD~ 99 (393)
T d1e43a2 24 QNDAEHLSDIGITAVWIPPAY-KGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (393)
T ss_dssp HHHHHHHHHHTCCEEEECCCS-EESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCcCc-cCCCCCCCCCCcccCcccccccccCccCCCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 35599999999999999 442 111000000 0 0122 568999999999999999999999
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.48 E-value=0.014 Score=57.71 Aligned_cols=57 Identities=21% Similarity=0.501 Sum_probs=40.5
Q ss_pred HHHHHHHhCCccEEEeCcc------------cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRIPVG------------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRIPv~------------~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-.+.|+++|+++|=||=. ||...+|.. ...++ |..+.|+++|+.|+++||+||+|+
T Consensus 27 e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~d-Y~v~~~~Gt~~dfk~Lv~~aH~~GI~VIlDv 97 (403)
T d1hx0a2 27 ECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVS-YKLCTRSGNENEFRDMVTRCNNVGVRIYVDA 97 (403)
T ss_dssp HHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSC-SCSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCC-CccCCCCCCHHHHHHHHHHHHhcCCEEEEEE
Confidence 3345699999999999632 122223221 11222 679999999999999999999998
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=94.28 E-value=0.015 Score=57.52 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=39.4
Q ss_pred HHHHHHHhCCccEEEe-Ccc--------cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVG--------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~--------~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|-| ||. +|. .++......++ +..+.|+++|+.|+++||+||+|+
T Consensus 57 ~kLdyl~~LGv~~I~l~Pi~~~~~~~~~~~G-Y~~~d~~~vd~~~Gt~~df~~lv~~~H~~Gi~VilD~ 124 (422)
T d1h3ga3 57 DHLDYIAGLGFTQLWPTPLVENDAAAYSYHG-YAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDV 124 (422)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCSSCGGGC-CSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhHHHHHHCCCCEEEeCCcccCCCCCCCCCC-CCccccCCcccccCCHHHHHHHHHHHHHhCccccccC
Confidence 3478999999999997 541 110 00100000011 578999999999999999999998
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=94.26 E-value=0.036 Score=52.63 Aligned_cols=57 Identities=18% Similarity=0.152 Sum_probs=40.2
Q ss_pred HHHHHHHhCCccEEEe-Ccc----cccccCCCCCCCCC---CchHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVG----WWIANDPTPPKPFV---GGSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~----~w~~~~~~~~~~~~---~~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|-| |+. +|. .++......+ -|..+.|+++|+.|.++||+||+|+
T Consensus 25 ~kLdyl~~lGv~~i~L~Pi~~~~~~~g-Y~~~d~~~id~~~~G~~~~f~~lv~~~H~~gi~VilD~ 89 (347)
T d1ht6a2 25 GKVDDIAAAGVTHVWLPPPSHSVSNEG-YMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADI 89 (347)
T ss_dssp TTHHHHHHTTCCEEEECCCSCBSSTTS-SSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhHHHHHHcCCCEEEECCCCcCCCCCC-CCccCcCcCCcccCCCHHHHHHHHHHHhhcceEEeeec
Confidence 3488999999999998 332 111 0111101111 2678999999999999999999998
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=94.13 E-value=0.031 Score=54.90 Aligned_cols=59 Identities=29% Similarity=0.355 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCC----CC-----------CCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPP----KP-----------FVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~----~~-----------~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+.++.|+++|+|+|=|+=-+........+ .. .++ +..+.|+++|+.|+++||+||||+
T Consensus 24 ~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df~~Lv~~aH~~GIkVilDv 99 (394)
T d2d3na2 24 NSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 99 (394)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 567899999999999984211111100000 00 111 568999999999999999999998
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=93.91 E-value=0.021 Score=56.45 Aligned_cols=57 Identities=25% Similarity=0.374 Sum_probs=39.5
Q ss_pred HHHHHHHhCCccEEEe-CcccccccC-----CCCCCCC--------CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIAND-----PTPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~~-----~~~~~~~--------~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|=| ||.- .... ......| ++ +..+.|+++|+.|+++||+||||+
T Consensus 56 ~kLdyl~~LGv~~I~L~Pi~~-~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~ 128 (407)
T d1qhoa4 56 QKLPYLKQLGVTTIWLSPVLD-NLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (407)
T ss_dssp HTHHHHHHHTCCEEEECCCEE-ECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCcccc-CCcccCCCCCCCCCceeeeecCCCCCCCCCHHHHHHHHHHhhhcccceeecc
Confidence 4578999999999998 4411 0000 0000011 11 578999999999999999999998
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=93.72 E-value=0.034 Score=54.30 Aligned_cols=57 Identities=26% Similarity=0.391 Sum_probs=39.9
Q ss_pred HHHHHHHhCCccEEEe-Ccc----cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVG----WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~----~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|-| ||. +|- .++......++ +..+.|+++|+.|+++||+||+|+
T Consensus 27 ~kLdyl~~LGv~~I~l~Pi~~~~~~~G-Y~~~d~~~vd~~~Gt~~d~~~lv~~~h~~gi~VilD~ 90 (391)
T d1lwha2 27 NAVSYLKELGIDFVWLMPVFSSISFHG-YDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDL 90 (391)
T ss_dssp HTHHHHHHTTCSEEEECCCEECSSSSC-CSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCC-CCccCCCCcCcccCCHHHHHHHHHHHHhcCCEEeecc
Confidence 3478999999999998 552 110 01100000112 578999999999999999999998
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=93.69 E-value=0.035 Score=55.75 Aligned_cols=56 Identities=25% Similarity=0.481 Sum_probs=39.7
Q ss_pred HHHHHHhCCccEEEe-Ccc---------------------cccccCCCCCCC-C-----CCchHHHHHHHHHHHHHCCCE
Q 009475 232 DFKFLSSNGINAVRI-PVG---------------------WWIANDPTPPKP-F-----VGGSSKVLDNAFDWAEKYGVK 283 (534)
Q Consensus 232 d~~~ia~~G~N~VRI-Pv~---------------------~w~~~~~~~~~~-~-----~~~~l~~ld~~v~~a~~~Gl~ 283 (534)
-++.|+++|+|+|=| ||. ||. .+....+| | ..+..+.|+++|+.|+++||+
T Consensus 48 kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~~y~GY~~-~d~~~vdp~y~~~~~~~Gt~~d~~~LV~~aH~~GIr 126 (475)
T d1bf2a3 48 KASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMT-ENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIK 126 (475)
T ss_dssp THHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCB-SCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCE
T ss_pred hhHHHHHcCCCEEEeCCCCcCCCcccccccccccCcCCCCCCc-ccCCCcCcccccCCCCCCCHHHHHHHHHHHHhcCcE
Confidence 478999999999998 442 221 11000011 1 126789999999999999999
Q ss_pred EEEEc
Q 009475 284 VIVDL 288 (534)
Q Consensus 284 VIlDl 288 (534)
||+|+
T Consensus 127 VilD~ 131 (475)
T d1bf2a3 127 VYMDV 131 (475)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99998
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=93.68 E-value=0.043 Score=55.00 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=38.8
Q ss_pred HHHHHHhCCccEEEe-Ccc-----cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 232 DFKFLSSNGINAVRI-PVG-----WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 232 d~~~ia~~G~N~VRI-Pv~-----~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
-++.|+++|+|+|-| ||. +|- .++......++ |..+.|+++|+.|+++||+||||+
T Consensus 36 kLdYLk~LGv~~I~l~Pi~~~~~~~~G-Y~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (479)
T d1uoka2 36 KLDYLKELGIDVIWLSPVYESPNDDNG-YDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (479)
T ss_dssp THHHHHHHTCCEEEECCCEECCCTTTT-SSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHcCCCEEEECCCcCCCCCCCC-cCccccCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 377999999999998 441 110 00100000111 578999999999999999999998
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=93.63 E-value=0.045 Score=54.86 Aligned_cols=57 Identities=23% Similarity=0.315 Sum_probs=39.3
Q ss_pred HHHHHHHhCCccEEEe-Cccc-----ccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGW-----WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~-----w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|-| ||.- |- .++......++ |..+.|+++|+.|+++||+||||+
T Consensus 35 ~kLdyLk~LGv~~I~L~Pi~~~~~~~~G-Y~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (478)
T d1m53a2 35 EKLDYLKSLGIDAIWINPHYDSPNTDNG-YDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 99 (478)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTT-SSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCC-cCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 4578999999999998 3320 10 00000000011 578999999999999999999998
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=93.57 E-value=0.047 Score=53.50 Aligned_cols=58 Identities=17% Similarity=0.296 Sum_probs=40.1
Q ss_pred HHHHHHHhCCccEEEe-CcccccccC---CCCCCCCC----------CchHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIAND---PTPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~~---~~~~~~~~----------~~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|=| ||....... ..+..+|. -+..+.|+++|+.|+++||+||+|+
T Consensus 47 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~ 118 (381)
T d2guya2 47 DKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDV 118 (381)
T ss_dssp HTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCcccccccccccCCCCHHHHHHHHHHHHhhccceeeec
Confidence 4588999999999997 442100000 00111111 2678999999999999999999998
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=93.53 E-value=0.018 Score=56.22 Aligned_cols=62 Identities=29% Similarity=0.502 Sum_probs=42.0
Q ss_pred HHHHHHHHhCCccEEEe-Cccc---------------ccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---
Q 009475 230 DEDFKFLSSNGINAVRI-PVGW---------------WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL--- 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRI-Pv~~---------------w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl--- 288 (534)
.+.++.|+++|+|+|=| ||.- |. .++......++ +..+.|+++|+.|+++||+||+|+
T Consensus 20 ~~~ldyl~~lGv~aIwl~Pi~~~~~~~~~~~~~~~~y~g-Y~~~dy~~vd~~~Gt~~df~~LV~~aH~~Gi~VilD~V~N 98 (344)
T d1ua7a2 20 KHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWL-YQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVIN 98 (344)
T ss_dssp HHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGG-GCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred HHhHHHHHHcCCCEEEeCCCeeCCCcCCCCCCCCCCccc-cccccCCCCCCCCCCHHHHHHHHHHhcccceeEeecccee
Confidence 35578999999999997 4421 10 01100000011 578999999999999999999998
Q ss_pred CCCC
Q 009475 289 HAAP 292 (534)
Q Consensus 289 H~~p 292 (534)
|..+
T Consensus 99 H~~~ 102 (344)
T d1ua7a2 99 HTTF 102 (344)
T ss_dssp BCCS
T ss_pred eecC
Confidence 6543
|
| >d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase H N-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=93.49 E-value=2.2 Score=39.43 Aligned_cols=127 Identities=13% Similarity=0.061 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCC
Q 009475 267 SKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 346 (534)
Q Consensus 267 l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~ 346 (534)
+..+.+.++.+...|..++|.++-..++ ......| .+-+...++-+.|++ + +.| |+ +.+.+|+++
T Consensus 41 ~~~~~~~~~~~~~~g~~~~it~~P~~~~-----~~~ia~G------~yD~~i~~~a~~l~~-~-g~p-v~-~R~~hE~ng 105 (273)
T d2v3ga1 41 FSWVRPYADAVYNNGSILMITWEPWEYN-----TVDIKNG------KADAYITRMAQDMKA-Y-GKE-IW-LRPLHEANG 105 (273)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECTTCC-----HHHHHTT------TTHHHHHHHHHHHHH-H-CSC-EE-EEESCCTTS
T ss_pred chhHHHHHHHHHhCCCeEEEEeCCCCCC-----HHHHhCc------chHHHHHHHHHHHHh-c-CCC-EE-EEecccCCC
Confidence 3556777888899999999998732110 0000001 111222233333332 2 345 43 789999985
Q ss_pred C-----------CCChHHHHHHHHHHHHHHHhcCCceEEEEeC--CCCCCChhhhhcccCCCceE-EEEEeecccC
Q 009475 347 P-----------GVALDTLKSYYKAGYDAVRKYTSTAYVIMSN--RLGPADHKELLSFASGLSRV-VIDVHYYNLF 408 (534)
Q Consensus 347 ~-----------~~~~~~~~~~~~~~~~aIR~~~p~~~Iiv~~--~~~~~~~~~~~~~~~~~~nv-v~d~H~Y~~f 408 (534)
. ..+++.+++.++.+++++|+.+.+.++.+-+ .....+...+....++++.| ++.++.|...
T Consensus 106 ~W~~W~~~~~~~~~~p~~y~~a~r~v~~~~r~~g~~nv~~vw~p~~~~~~~~~~~~~yYPGDdyVD~vG~d~Y~~~ 181 (273)
T d2v3ga1 106 DWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYPGDNYVDYTSIDGYNWG 181 (273)
T ss_dssp SSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCCCGGGCSBEEEEEEECT
T ss_pred CcccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCChhhHHhhCCCCCEEEEEEEeccCCC
Confidence 2 1357899999999999999987777766622 11111222333443566666 7888888654
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=93.44 E-value=0.047 Score=53.52 Aligned_cols=57 Identities=18% Similarity=0.304 Sum_probs=39.7
Q ss_pred HHHHHHHhCCccEEEe-CcccccccCC-CCC---CCC--------C--CchHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIANDP-TPP---KPF--------V--GGSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~~~-~~~---~~~--------~--~~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|-| ||. ...... .++ ..| + -+..+.|+++|+.|+++||+||+|+
T Consensus 47 ~kLdyL~~LGv~~I~L~Pi~-~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~ 118 (381)
T d2aaaa2 47 DHLDYIEGMGFTAIWISPIT-EQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (381)
T ss_dssp HTHHHHHTTTCCEEEECCCE-EECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCc-cCCccCCCCCCCCcccccccccccccccCCHHHHHHHHHHHhhhhhcccccc
Confidence 5688999999999997 442 111000 000 011 1 1578999999999999999999998
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=93.43 E-value=0.024 Score=58.41 Aligned_cols=62 Identities=21% Similarity=0.243 Sum_probs=41.7
Q ss_pred HHHHHHHhCCccEEEe-Cccccccc--CCCCC-----------CCC------C-CchHHHHHHHHHHHHHCCCEEEEEc-
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWIAN--DPTPP-----------KPF------V-GGSSKVLDNAFDWAEKYGVKVIVDL- 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~~~--~~~~~-----------~~~------~-~~~l~~ld~~v~~a~~~Gl~VIlDl- 288 (534)
+-++.|+++|+|+|=| ||.-..-. .+... +|. . -+..+.|+++|+.|+++||+||||+
T Consensus 124 ~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI~VIlDvV 203 (572)
T d1gjwa2 124 LLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDFI 203 (572)
T ss_dssp HTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhhHHHHHcCCCEEEeCCcccCccccCCCCCCCCCCccCCCCCCcccccccccCCCCHHHHHHHHHHHHhcCcEEEEEee
Confidence 4578999999999998 54210000 00000 010 0 1578999999999999999999999
Q ss_pred --CCCC
Q 009475 289 --HAAP 292 (534)
Q Consensus 289 --H~~p 292 (534)
|...
T Consensus 204 ~NHts~ 209 (572)
T d1gjwa2 204 PRTAAR 209 (572)
T ss_dssp TTEEET
T ss_pred eccccc
Confidence 7654
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=92.93 E-value=0.056 Score=52.69 Aligned_cols=62 Identities=21% Similarity=0.388 Sum_probs=42.3
Q ss_pred HHHHH-HHHhCCccEEEeCccc----------ccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc---CCCC
Q 009475 230 DEDFK-FLSSNGINAVRIPVGW----------WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAP 292 (534)
Q Consensus 230 e~d~~-~ia~~G~N~VRIPv~~----------w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl---H~~p 292 (534)
.+.+. .|+++|+++|=||=-. |...++..- ..++ |..+.|+++|+.|+++||+||||+ |..+
T Consensus 25 ~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY-~id~~~Gt~~df~~LV~~aH~~GI~VilDvV~NH~~~ 102 (378)
T d1jaea2 25 ADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (378)
T ss_dssp HHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred HHHHHHHHHHhCCCEEEeCcccccCCCCCCCCccccCCccc-eeCCCCCCHHHHHHHHHHHHhcCceeeeeeccccccc
Confidence 34455 5999999999984321 222222111 1111 578999999999999999999997 6554
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=92.44 E-value=0.065 Score=53.80 Aligned_cols=60 Identities=25% Similarity=0.608 Sum_probs=49.5
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEE--EEEcCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 293 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~V--IlDlH~~pG 293 (534)
+..++.||++|+.-|=++| ||...+...+..| .+...+++++.+++.|||+ |+.+|...|
T Consensus 37 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 98 (498)
T d1fa2a_ 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQY---DWSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCcc---CcHHHHHHHHHHHHcCCeeEEEEeecccCC
Confidence 6799999999999999999 7777776555667 4788999999999999995 577786543
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=92.09 E-value=1.2 Score=37.10 Aligned_cols=107 Identities=10% Similarity=0.162 Sum_probs=72.5
Q ss_pred ceeEEeeeeceeEEEeecC---CCceEEe---ccCCCCCcceEEEEEec--CceEEEEee-CCcEEEeecCC--CCceEE
Q 009475 66 TQVQFMSTKFQKYIAAESG---GGTIVVA---NRTSASGWETFRLWRVN--ETFYNFRVN-NKQFIGLENQG--QGNGLV 134 (534)
Q Consensus 66 ~~~~~~s~~~~~~~~a~~~---g~~~~~a---nr~~~~~wetf~~~~~~--~~~~~~~~~-n~~~v~~~~~g--~~~~~~ 134 (534)
....||++..|++|-...+ -|++|+. |-+.......|++..+. .+.|.++.. .++++.+.++. .+..|+
T Consensus 5 G~Y~I~n~~s~~~ldv~~~~~~~G~~v~~w~~~~~~~~~nQ~W~~~~~~~~~~~y~i~n~~s~~~l~~~~~~~~~g~~v~ 84 (154)
T d2ihoa1 5 GIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVN 84 (154)
T ss_dssp EEEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEEE
T ss_pred EEEEEEECCCCCEEEeCCCCCCCCCEEEEEecCCCCCCcceEEEEEecCCcCceEEEEEcCCCeEEeccCCcCCCCcEEE
Confidence 4568999999999987554 4467765 43344457788887776 578999987 78999877532 133454
Q ss_pred Ee---ecCCCCCceEEEEEeCCCCceEEEEec-CCceEEeccc
Q 009475 135 AV---SNTAGYSETFQIVRKDGDSSRVRLSAS-NGMFIQAISE 173 (534)
Q Consensus 135 a~---~~~~~~~EtF~ivr~~~~~~~v~i~~~-nG~~Lq~~g~ 173 (534)
.- ..+.+++..|.++..+++. ..+|... +|..|.+.+.
T Consensus 85 ~~~~~~~~~~~~Q~W~~~~~~~g~-~y~i~n~~sg~~Ldv~~~ 126 (154)
T d2ihoa1 85 GWQGTAFTTNPHQLWTIKKSSDGT-SYKIQNYGSKTFVDLVNG 126 (154)
T ss_dssp EECCCTTCCCGGGCEEEEECTTSS-SEEEEETTTCCEEEEGGG
T ss_pred EEeecccCCCcccEEEEccCCCcc-eEEEEEcCCCcEEEcCCC
Confidence 32 2345678899999887764 3555544 5888887653
|
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=91.79 E-value=1 Score=42.81 Aligned_cols=107 Identities=20% Similarity=0.208 Sum_probs=63.7
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 309 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~~pG~qng~~~sg~~~g~~~ 309 (534)
++-++.|+++|++.||| | +++ -++++.++..||+|+|-+-... ...
T Consensus 16 ~~vv~lLk~~~i~~IRl---Y----~~d-------------~~vL~A~~~tgi~v~lGv~n~~--------------l~~ 61 (312)
T d2cyga1 16 SEVVSLYKSNNIARMRL---Y----DPN-------------QAALQALRNSNIQVLLDVPRSD--------------VQS 61 (312)
T ss_dssp HHHHHHHHHTTCCEEEE---S----SCC-------------HHHHHHHTTSCCEEEEEECHHH--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE---e----CCC-------------HHHHHHHHhcCCEEEEeeccch--------------hhh
Confidence 44566779999999998 1 221 1366777889999999873110 000
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCChHHHHHHHHHHHHHHHhcCCc
Q 009475 310 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 371 (534)
Q Consensus 310 W~~~~~~~~~~~w~~lA~ryk~~~~vlg~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 371 (534)
| ..+.+...+..+.....|.....|-++-+-||+.............++...+++++.+-.
T Consensus 62 ~-~~~~~~a~~wv~~~v~~~~~~~~I~~IaVGNE~l~~~~~~~~~lpa~~~~~~aL~~~g~~ 122 (312)
T d2cyga1 62 L-ASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQ 122 (312)
T ss_dssp H-HHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCT
T ss_pred c-cCCHHHHHHHHHHHHhccCCCceEEEEEecCEEeeCCcCchhhcccHHHHHHHHHHCCCC
Confidence 0 011122333344444456666678888899998754322233345566778888877643
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=91.71 E-value=0.099 Score=53.06 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHH-HHCCCEEEEEc
Q 009475 266 SSKVLDNAFDWA-EKYGVKVIVDL 288 (534)
Q Consensus 266 ~l~~ld~~v~~a-~~~Gl~VIlDl 288 (534)
.++.++++|+.| +++||+||||+
T Consensus 178 ~l~Efk~lV~a~~H~rGIkVIlD~ 201 (563)
T d2fhfa5 178 RIKEFRTMIQAIKQDLGMNVIMDV 201 (563)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred HHHHHHHHHHHHhhccCceeeecC
Confidence 478899999976 78899999998
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=91.56 E-value=0.062 Score=52.28 Aligned_cols=52 Identities=25% Similarity=0.378 Sum_probs=35.9
Q ss_pred HHhCCccEEEe-Ccc----cccccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 236 LSSNGINAVRI-PVG----WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 236 ia~~G~N~VRI-Pv~----~w~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
||++|+|+|-| ||. +|- ..+......++ +..+.|+++|+.|.++||+||+|+
T Consensus 44 i~~LGv~~i~l~Pi~~~~~~~G-Y~~~d~~~vd~~~G~~~dlk~lv~~~H~~Gi~VilD~ 102 (409)
T d1wzaa2 44 IADLGVNGIWLMPIFKSPSYHG-YDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDL 102 (409)
T ss_dssp CSSCCCSEEEECCCEECSSSSC-CSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HhhcCccEEEECCCCCCCCCCC-cCcccCCCcCcccCCHHHHHHHHHHHHhcCCEEEEec
Confidence 58999999998 552 110 01100000111 578999999999999999999998
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=91.50 E-value=1.4 Score=36.70 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=72.6
Q ss_pred CCCcccccceeEEeeeec-eeEEEeecCCCceEEeccCCCCCcceEEEEE-ecCceEEEEee-CCcEEEeecCCCCceEE
Q 009475 58 PNKDLLDGTQVQFMSTKF-QKYIAAESGGGTIVVANRTSASGWETFRLWR-VNETFYNFRVN-NKQFIGLENQGQGNGLV 134 (534)
Q Consensus 58 ~~~~~~~g~~~~~~s~~~-~~~~~a~~~g~~~~~anr~~~~~wetf~~~~-~~~~~~~~~~~-n~~~v~~~~~g~~~~~~ 134 (534)
...|++.|..-.|+|..| +|.|-. ..++.|..=...-+.-..|++.. .+.+.|.||.. +++.+.+.+.. +..++
T Consensus 2 ~~~~~~~~~~y~i~~~~Ns~kvlD~--~s~t~Vq~w~~~g~~nQkW~~~~~~~~g~Y~I~~~~s~~~l~~~~~~-g~~v~ 78 (145)
T d1qxma1 2 NANDLRNNEVFFISPSNNTNKVLDK--ISQSEVKLWNKLSGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAP-LSSVS 78 (145)
T ss_dssp CTTSCCTTCEEEEEETTCTTEEEEE--CSSSCEEEEECCCCGGGCEEEEEETTTTEEEEEESSSSCCEEEECTT-SSCEE
T ss_pred CCcccCcCCEEEEEECCCCCeEEEe--cCCCEEEEEcCCCChhheEEEEEcCCCCEEEEEECCCCCEEEeccCC-CceEE
Confidence 356888899999998664 455543 33344543333334456777775 45588999987 77777775432 34577
Q ss_pred EeecCCCCCceEEEEEeCCCCceEEEEe--cCCceEEecc
Q 009475 135 AVSNTAGYSETFQIVRKDGDSSRVRLSA--SNGMFIQAIS 172 (534)
Q Consensus 135 a~~~~~~~~EtF~ivr~~~~~~~v~i~~--~nG~~Lq~~g 172 (534)
.-...-++...|.|+...++ ..++|+. +.|+-|.+.+
T Consensus 79 ~~~~~g~~~Q~W~i~~~~~~-g~y~I~n~~ns~~vLDv~g 117 (145)
T d1qxma1 79 VKTDTNGDNQYWYLLQNYIS-RNVIIRNYMNPNLVLQYNI 117 (145)
T ss_dssp EECCCCCGGGCEEEEECTTT-CCEEEEESSCTTEEEEECT
T ss_pred EEcCCCCchheEEEeecCCC-CEEEEEEccCCCEEEEecC
Confidence 77777788888998875433 2466664 4588888764
|
| >d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.45 E-value=0.45 Score=38.58 Aligned_cols=88 Identities=16% Similarity=0.204 Sum_probs=60.0
Q ss_pred cccCCcCCcCCCCCcccccceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEEecCceEEEEeeCCcEEEeec
Q 009475 47 GWMKPSRFDDIPNKDLLDGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLEN 126 (534)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~~~~~~~~~~~~n~~~v~~~~ 126 (534)
||=.-++|.-. +.| .+..|++ .+|+||..+. .|+. ..+-+. -|.|--- .|.++||-.+|+|++...
T Consensus 30 PWG~d~litL~----f~~-grY~L~t-~~~ryL~~~G----~Lv~-~~~~~t--~Ftle~~-~G~vA~rD~~G~yL~p~G 95 (119)
T d1dfca2 30 PWGVDSLITLA----FQD-QRYSVQT-ADHRFLRHDG----RLVA-RPEPAT--GYTLEFR-SGKVAFRDCEGRYLAPSG 95 (119)
T ss_dssp CCTTTTCEEEE----ECS-SSEEEEE-TTSCEECTTS----CEES-SCCGGG--CEEEEEC-SSEEEEEESSSCBEEECS
T ss_pred CcccCcEEEEE----EcC-CEEEEEe-CCCCeECCCC----cCcc-cCCCCc--EEEEEEe-CCeEEEEcCCCCEEeccC
Confidence 46655665421 123 5889994 7999999532 4443 333333 4555444 467999999999999974
Q ss_pred CCCCceEEEeec-CCCCCceEEEEE
Q 009475 127 QGQGNGLVAVSN-TAGYSETFQIVR 150 (534)
Q Consensus 127 ~g~~~~~~a~~~-~~~~~EtF~ivr 150 (534)
. .++|.+.+. .+|.-|-|.+.+
T Consensus 96 ~--~g~Lk~gk~~~~gkdElF~Le~ 118 (119)
T d1dfca2 96 P--SGTLKAGKATKVGKDELFALEQ 118 (119)
T ss_dssp S--SCCEEECSCSSCCSTTCEEEEE
T ss_pred C--CceEEcCCCCCCCceeEEEeec
Confidence 2 567999875 599999998875
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=91.28 E-value=0.14 Score=53.06 Aligned_cols=58 Identities=12% Similarity=0.218 Sum_probs=40.0
Q ss_pred HHHHHHHhCCccEEEe-Cccccc------ccCCCCCCCCCC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 231 EDFKFLSSNGINAVRI-PVGWWI------ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 231 ~d~~~ia~~G~N~VRI-Pv~~w~------~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
+-++.|+++|+|+|-| ||.-.. ..++......++ |..+.|+++|+.|+++||+||||+
T Consensus 117 ~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lGt~edl~~Lv~~aH~rGI~VilD~ 183 (554)
T d1g5aa2 117 DKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (554)
T ss_dssp TTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3478999999999998 542100 000100011122 579999999999999999999998
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=83.47 E-value=0.7 Score=48.51 Aligned_cols=57 Identities=14% Similarity=0.284 Sum_probs=39.8
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCC--------CC--chHHHHHHHHHHHHHCCCEEEEEc
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 288 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~--------~~--~~l~~ld~~v~~a~~~Gl~VIlDl 288 (534)
.+.+..|+++|+++|=|+=-+.. .+....-| ++ |..+.++++|+.|+++||+||+|+
T Consensus 20 ~~~LpYL~~LGVs~IyLsPi~~a--~~gS~HGYDv~D~~~Vdp~lGt~edf~~LV~aaH~~Gm~VIlDi 86 (653)
T d1iv8a2 20 IDNLWYFKDLGVSHLYLSPVLMA--SPGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDI 86 (653)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEE--CTTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHCCCCEEEECccCCC--CCCCCCCccccCccccchhcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35688899999999998421111 01000001 12 678999999999999999999996
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=81.08 E-value=3.7 Score=34.03 Aligned_cols=83 Identities=10% Similarity=0.050 Sum_probs=59.1
Q ss_pred ccceeEEeeeeceeEEEeecCCCceEEeccCCCCCcceEEEEE-ecCceEEEEee-C-CcEEEeecCCCCceEEEeecCC
Q 009475 64 DGTQVQFMSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWR-VNETFYNFRVN-N-KQFIGLENQGQGNGLVAVSNTA 140 (534)
Q Consensus 64 ~g~~~~~~s~~~~~~~~a~~~g~~~~~anr~~~~~wetf~~~~-~~~~~~~~~~~-n-~~~v~~~~~g~~~~~~a~~~~~ 140 (534)
++...+||++.+++.+-+.+.-|+.++.-...-+.-..|++.. .+++.|.||.. + ++-+-+.+ |.+|+.-...-
T Consensus 52 ~~g~Y~I~~~~s~~~l~~~~~~g~~v~~~~~~g~~~Q~W~i~~~~~~g~y~I~n~~ns~~vLDv~g---g~~v~~~~~~g 128 (145)
T d1qxma1 52 NKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNI---DDTLMVSTQTS 128 (145)
T ss_dssp TTTEEEEEESSSSCCEEEECTTSSCEEEECCCCCGGGCEEEEECTTTCCEEEEESSCTTEEEEECT---TSCEEEEECCS
T ss_pred CCCEEEEEECCCCCEEEeccCCCceEEEEcCCCCchheEEEeecCCCCEEEEEEccCCCEEEEecC---CceEEEeCCCC
Confidence 3457889999999998886666677777777778888998865 56888999974 4 55555543 33466666666
Q ss_pred CCCceEEEE
Q 009475 141 GYSETFQIV 149 (534)
Q Consensus 141 ~~~EtF~iv 149 (534)
++-..|++.
T Consensus 129 ~~nQ~w~~~ 137 (145)
T d1qxma1 129 SSNQFFKFS 137 (145)
T ss_dssp CGGGCEEEE
T ss_pred CcccEEEEe
Confidence 666666654
|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Outer surface protein, N-terminal domain domain: Outer surface protein, N-terminal domain species: Bacillus cereus [TaxId: 1396]
Probab=80.21 E-value=1.1 Score=40.91 Aligned_cols=53 Identities=11% Similarity=0.122 Sum_probs=34.9
Q ss_pred HHHHHHHHhCCccEEEeCcccccccCCCCCCCCCCchHHHHHHHHHHHHHCCCEEEEEcCC
Q 009475 230 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 290 (534)
Q Consensus 230 e~d~~~ia~~G~N~VRIPv~~w~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~VIlDlH~ 290 (534)
++-++.+++.||+.|=.-+. .+... .+...+++++++++|+++||+||+|+-.
T Consensus 20 ~~yi~~a~~~Gf~~iFTSL~-----~~e~~---~~~~~~~~~~l~~~a~~~g~~vi~DIsp 72 (244)
T d1x7fa2 20 MAYISAAARHGFSRIFTCLL-----SVNRP---KEEIVAEFKEIINHAKDNNMEVILDVAP 72 (244)
T ss_dssp HHHHHHHHTTTEEEEEEEEC-----CC-----------HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHCCCCEEEecCc-----cCCCC---HHHHHHHHHHHHHHHHHCCCEEEEEcCH
Confidence 44577778899886654321 12111 2246789999999999999999999874
|