Citrus Sinensis ID: 009516
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 533 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SAK4 | 528 | Succinate-semialdehyde de | yes | no | 0.988 | 0.998 | 0.778 | 0.0 | |
| B9F3B6 | 527 | Succinate-semialdehyde de | yes | no | 0.966 | 0.977 | 0.757 | 0.0 | |
| P25526 | 482 | Succinate-semialdehyde de | N/A | no | 0.900 | 0.995 | 0.571 | 1e-166 | |
| P51650 | 523 | Succinate-semialdehyde de | yes | no | 0.889 | 0.906 | 0.577 | 1e-157 | |
| Q8BWF0 | 523 | Succinate-semialdehyde de | yes | no | 0.889 | 0.906 | 0.573 | 1e-155 | |
| Q3MSM3 | 535 | Succinate-semialdehyde de | N/A | no | 0.894 | 0.891 | 0.582 | 1e-152 | |
| Q6A2H2 | 535 | Succinate-semialdehyde de | N/A | no | 0.894 | 0.891 | 0.578 | 1e-151 | |
| P51649 | 535 | Succinate-semialdehyde de | yes | no | 0.894 | 0.891 | 0.578 | 1e-150 | |
| Q3MSM4 | 535 | Succinate-semialdehyde de | N/A | no | 0.894 | 0.891 | 0.578 | 1e-150 | |
| Q6A2H1 | 535 | Succinate-semialdehyde de | N/A | no | 0.894 | 0.891 | 0.578 | 1e-150 |
| >sp|Q9SAK4|SSDH_ARATH Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/532 (77%), Positives = 474/532 (89%), Gaps = 5/532 (0%)
Query: 1 MTLSGVARVAFVGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIG 60
M + ARVA G R++ +SH + + RQMS+ +SV+++LR SGLLRTQGLIG
Sbjct: 1 MVIGAAARVAIGGCRKLISSHTSLL--LVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIG 58
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
GKW+D+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK L
Sbjct: 59 GKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVL 118
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
R+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L
Sbjct: 119 RRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLS 178
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA 240
DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TPLTALAAAELA
Sbjct: 179 DRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELA 238
Query: 241 LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVS 300
LQAG+PPG +NVVMGNAP+IGDALLTSPQVRKITFTGSTAVGKKLMA AA TVKK VS
Sbjct: 239 LQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKK---VS 295
Query: 301 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 360
LELGGNAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV
Sbjct: 296 LELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAV 355
Query: 361 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 420
+ L+VGDGF +G QGPLIN AA++KVETFV+DAVSKGAK+++GG+RHSLGMTFYEPTV+
Sbjct: 356 QKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVI 415
Query: 421 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 480
+V M++S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EAL
Sbjct: 416 RDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEAL 475
Query: 481 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 532
EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 476 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
|
Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|B9F3B6|SSDH_ORYSJ Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/520 (75%), Positives = 454/520 (87%), Gaps = 5/520 (0%)
Query: 12 VGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKT 71
+G+R I A+ S S R MSV + +++R +GLLRTQGLIGGKW+DAYDGKT
Sbjct: 13 LGARHILAAS--STSSSGVLLRRHMSVDAGAAMEKVRAAGLLRTQGLIGGKWVDAYDGKT 70
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
+EV NPATGE +ANVSCMG KET DAI+SA F SWSKLTA ERSK LRKW+DL+++HK
Sbjct: 71 IEVQNPATGETLANVSCMGSKETSDAIASAHSTFYSWSKLTANERSKALRKWHDLIISHK 130
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV 191
EEL L+TLEQGKP+KEA+ EV YGA FIE++AEEAKR+YG+IIP TL DRRL VLKQPV
Sbjct: 131 EELALLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRRLLVLKQPV 190
Query: 192 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251
GV GA+TPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA+LALQAGIP G +N
Sbjct: 191 GVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAADLALQAGIPAGAIN 250
Query: 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311
VVMGNAP+IGDALL S QVRKITFTGSTAVGKKLMAG+A TVKK VSLELGGNAPCIV
Sbjct: 251 VVMGNAPEIGDALLQSTQVRKITFTGSTAVGKKLMAGSANTVKK---VSLELGGNAPCIV 307
Query: 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371
FDDAD++VA+ G+LAAKFRNSGQTCVCANR+LVQEGIYEKFA AF KAV++LKVG+G E
Sbjct: 308 FDDADIDVAIKGSLAAKFRNSGQTCVCANRILVQEGIYEKFASAFIKAVQSLKVGNGLEE 367
Query: 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 431
QGPLIN+AA++KVE F+ DA SKGA ++LGG+RHSLGM+FYEPTV+ NV ++ML+ R
Sbjct: 368 STSQGPLINEAAVQKVEKFINDATSKGANIMLGGKRHSLGMSFYEPTVVGNVSNDMLLFR 427
Query: 432 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491
EEVFGPVAPL+ FKTEE+AI MANDTNAGLAAYIFT ++ R+WRVSEALEYGLVGVNEG+
Sbjct: 428 EEVFGPVAPLVPFKTEEDAIRMANDTNAGLAAYIFTKSIPRSWRVSEALEYGLVGVNEGI 487
Query: 492 ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 531
ISTEVAPFGGVKQSGLGREGSKYGMDE+LE+KY+C+G++N
Sbjct: 488 ISTEVAPFGGVKQSGLGREGSKYGMDEYLELKYICMGNLN 527
|
Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P25526|GABD_ECOLI Succinate-semialdehyde dehydrogenase [NADP(+)] GabD OS=Escherichia coli (strain K12) GN=gabD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 585 bits (1508), Expect = e-166, Method: Compositional matrix adjust.
Identities = 276/483 (57%), Positives = 364/483 (75%), Gaps = 3/483 (0%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 2 KLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AE
Sbjct: 62 PAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP +ALA AELA++AG+P GV NVV G+A +G+ L ++P VRK++FTGST +G++L
Sbjct: 182 ASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
M A +KKV SLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ
Sbjct: 242 MEQCAKDIKKV---SLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQ 298
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
+G+Y++FA+ +AV L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG
Sbjct: 299 DGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGG 358
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+ H G F++PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY
Sbjct: 359 KAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYF 418
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+
Sbjct: 419 YARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYM 478
Query: 526 CLG 528
C+G
Sbjct: 479 CIG 481
|
Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. It appears to be important for nitrogen metabolism under N limitation conditions. Escherichia coli (strain K12) (taxid: 83333) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 9 |
| >sp|P51650|SSDH_RAT Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust.
Identities = 279/483 (57%), Positives = 360/483 (74%), Gaps = 9/483 (1%)
Query: 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKL 111
LLR +GG+W+ T V++PA+G + V+ G E + A+ +A+DAF+SW ++
Sbjct: 46 LLRGDSFVGGRWLPT--PATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFSSWKEI 103
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 171
+ ERS LRKWYDL++ +K+EL ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVY
Sbjct: 104 SVKERSSLLRKWYDLMIQNKDELAKIITAESGKPLKEAQGEILYSAFFLEWFSEEARRVY 163
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+II + D+R VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP
Sbjct: 164 GDIIYTSAKDKRGLVLKQPVGVASIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPY 223
Query: 232 TALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288
+ALA A+LA QAGIPPGV NV+ A ++G+ L T P V KI+FTGSTA GK L+
Sbjct: 224 SALALAQLANQAGIPPGVYNVIPCSRTKAKEVGEVLCTDPLVSKISFTGSTATGKILLHH 283
Query: 289 AAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 348
AA +VK RVS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+NR LVQ GI
Sbjct: 284 AANSVK---RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGI 340
Query: 349 YEKFADAFSKAV-KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 407
++ F F++A+ K+L+VG+GF EG QGPLIN+ A+EKVE V DAV+KGA V+ GG+R
Sbjct: 341 HDSFVTKFAEAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKHVNDAVAKGATVVTGGKR 400
Query: 408 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467
H G F+EPT+LSNV +ML EE FGPVAP++ F EEEA+ +AN + GLA Y ++
Sbjct: 401 HQSGGNFFEPTLLSNVTRDMLCITEETFGPVAPVIKFDKEEEAVAIANAADVGLAGYFYS 460
Query: 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC
Sbjct: 461 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCY 520
Query: 528 GDM 530
G +
Sbjct: 521 GGL 523
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q8BWF0|SSDH_MOUSE Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 550 bits (1417), Expect = e-155, Method: Compositional matrix adjust.
Identities = 277/483 (57%), Positives = 358/483 (74%), Gaps = 9/483 (1%)
Query: 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKL 111
LLR +GG+W+ A T V++PA+G + V+ G E + A+ +A+DAFNSW +
Sbjct: 46 LLRGDSFVGGRWLPA--PATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFNSWKGV 103
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 171
+ ERS LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R+Y
Sbjct: 104 SVKERSLLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSALFLEWFSEEARRIY 163
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+II + D+R VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP
Sbjct: 164 GDIIYTSAKDKRGLVLKQPVGVAAIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPY 223
Query: 232 TALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288
+ALA A+LA QAGIP GV NV+ A ++G+ L T P V KI+FTGSTA GK L+
Sbjct: 224 SALALAQLANQAGIPAGVYNVIPCSRNKAKEVGEVLCTDPLVSKISFTGSTATGKILLHH 283
Query: 289 AAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 348
AA +VK RVS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+NR LVQ GI
Sbjct: 284 AANSVK---RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGI 340
Query: 349 YEKFADAFSKAV-KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 407
++ F F++A+ K+L+VG+GF EG QGPLIN+ A+EKVE V DAV+KGA V+ GG+R
Sbjct: 341 HDSFVTKFAEAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVAKGATVVTGGKR 400
Query: 408 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467
H G F+EPT+LSNV +ML EE FGP+AP++ F EEEA+ +AN GLA Y ++
Sbjct: 401 HQSGGNFFEPTLLSNVTRDMLCITEETFGPLAPVIKFDKEEEAVAIANAAEVGLAGYFYS 460
Query: 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC
Sbjct: 461 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCY 520
Query: 528 GDM 530
G +
Sbjct: 521 GGL 523
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM3|SSDH_HYLLA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 537 bits (1383), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/486 (58%), Positives = 364/486 (74%), Gaps = 9/486 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
+ AA +VK RVS+ELGG AP IVFD A+++ AV GALA+KFRN+GQTCVC+NR LVQ
Sbjct: 293 LHHAANSVK---RVSMELGGLAPFIVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQ 349
Query: 346 EGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404
GI++ F AF++A+K NL VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ G
Sbjct: 350 RGIHDAFVKAFAEAMKKNLHVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTG 409
Query: 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 464
G+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y
Sbjct: 410 GKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGY 469
Query: 465 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KY
Sbjct: 470 FYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKY 529
Query: 525 VCLGDM 530
VC G +
Sbjct: 530 VCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Hylobates lar (taxid: 9580) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H2|SSDH_PONPY Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/486 (57%), Positives = 364/486 (74%), Gaps = 9/486 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
+ AA +VK RVS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ
Sbjct: 293 LHHAANSVK---RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQ 349
Query: 346 EGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404
GI++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ G
Sbjct: 350 RGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTG 409
Query: 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 464
G+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y
Sbjct: 410 GKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGY 469
Query: 465 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KY
Sbjct: 470 FYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKY 529
Query: 525 VCLGDM 530
VC G +
Sbjct: 530 VCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pongo pygmaeus (taxid: 9600) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P51649|SSDH_HUMAN Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust.
Identities = 281/486 (57%), Positives = 364/486 (74%), Gaps = 9/486 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
+ AA +VK RVS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ
Sbjct: 293 LHHAANSVK---RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQ 349
Query: 346 EGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404
GI++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ G
Sbjct: 350 RGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTG 409
Query: 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 464
G+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y
Sbjct: 410 GKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGY 469
Query: 465 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KY
Sbjct: 470 FYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKY 529
Query: 525 VCLGDM 530
VC G +
Sbjct: 530 VCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM4|SSDH_PANPA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust.
Identities = 281/486 (57%), Positives = 364/486 (74%), Gaps = 9/486 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCCW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
+ AA +VK RVS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ
Sbjct: 293 LHHAANSVK---RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQ 349
Query: 346 EGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404
GI++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ G
Sbjct: 350 RGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTG 409
Query: 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 464
G+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y
Sbjct: 410 GKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGY 469
Query: 465 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KY
Sbjct: 470 FYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKY 529
Query: 525 VCLGDM 530
VC G +
Sbjct: 530 VCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pan paniscus (taxid: 9597) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H1|SSDH_GORGO Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 281/486 (57%), Positives = 364/486 (74%), Gaps = 9/486 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
+ AA +VK RVS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ
Sbjct: 293 LHHAANSVK---RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQ 349
Query: 346 EGIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404
GI++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ G
Sbjct: 350 RGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTG 409
Query: 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 464
G+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y
Sbjct: 410 GKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGY 469
Query: 465 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KY
Sbjct: 470 FYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKY 529
Query: 525 VCLGDM 530
VC G +
Sbjct: 530 VCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Gorilla gorilla gorilla (taxid: 9595) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 533 | ||||||
| 449444298 | 541 | PREDICTED: succinate-semialdehyde dehydr | 0.932 | 0.918 | 0.818 | 0.0 | |
| 356555230 | 537 | PREDICTED: succinate-semialdehyde dehydr | 0.947 | 0.940 | 0.799 | 0.0 | |
| 350538647 | 522 | succinic semialdehyde dehydrogenase [Sol | 0.928 | 0.948 | 0.811 | 0.0 | |
| 356528645 | 537 | PREDICTED: succinate-semialdehyde dehydr | 0.949 | 0.942 | 0.787 | 0.0 | |
| 255577875 | 607 | succinate semialdehyde dehydrogenase, pu | 0.923 | 0.810 | 0.838 | 0.0 | |
| 224109088 | 536 | predicted protein [Populus trichocarpa] | 0.951 | 0.945 | 0.813 | 0.0 | |
| 15219379 | 528 | succinate-semialdehyde dehydrogenase [Ar | 0.988 | 0.998 | 0.778 | 0.0 | |
| 297842727 | 527 | ALDH5F1 [Arabidopsis lyrata subsp. lyrat | 0.986 | 0.998 | 0.774 | 0.0 | |
| 225462297 | 530 | PREDICTED: succinate-semialdehyde dehydr | 0.983 | 0.988 | 0.766 | 0.0 | |
| 297736107 | 525 | unnamed protein product [Vitis vinifera] | 0.932 | 0.946 | 0.802 | 0.0 |
| >gi|449444298|ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/500 (81%), Positives = 459/500 (91%), Gaps = 3/500 (0%)
Query: 34 RQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKE 93
RQMS +S+T RL SGLLR+QGLIGGKWIDAYDGKTL+V NPA GEVI NV MG +E
Sbjct: 45 RQMSSEAQSITTRLHSSGLLRSQGLIGGKWIDAYDGKTLKVQNPANGEVITNVPLMGKRE 104
Query: 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153
T DAISSA+DAF SWSKLTAA+RS LRKWY+LLMAHKEELGQLITLEQGKPLKEA+GE
Sbjct: 105 TDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLMAHKEELGQLITLEQGKPLKEALGET 164
Query: 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213
+YGA FIEF++EEAKRVYG+II T+ DRRL VLKQPVGV G ITPWNFPLAMITRKVGP
Sbjct: 165 NYGASFIEFFSEEAKRVYGDIISPTIADRRLLVLKQPVGVVGIITPWNFPLAMITRKVGP 224
Query: 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 273
ALA GCTVV+KPSE TPLTALAAAEL+LQAGIPPGVVNVVMG+AP IGDA+L S QVRKI
Sbjct: 225 ALASGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKI 284
Query: 274 TFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 333
TFTGSTAVGKKLMAGAAGTVK RVS ELGGNAPCI+FDDAD++VAV G++AAKFRNSG
Sbjct: 285 TFTGSTAVGKKLMAGAAGTVK---RVSFELGGNAPCIIFDDADVDVAVKGSIAAKFRNSG 341
Query: 334 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393
QTCVCANR+LVQEGIYEKF +AFSKAV+NL+VGDGFGEGV QGPLIN+AA++KVE F++D
Sbjct: 342 QTCVCANRILVQEGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQD 401
Query: 394 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 453
A +KGAKVLLGG+RHSLGMTF+EPTV++ VKS+ML+SREEVFGPVAPLL F+TEEEAI +
Sbjct: 402 ATTKGAKVLLGGKRHSLGMTFFEPTVVAGVKSDMLLSREEVFGPVAPLLPFRTEEEAIAL 461
Query: 454 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 513
ANDTNAGLAAYIFTNN+QR+WRV+EALEYG+VGVNEGLISTEVAPFGGVKQSGLGREGSK
Sbjct: 462 ANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGSK 521
Query: 514 YGMDEFLEIKYVCLGDMNRK 533
YGMDE+LE+KYVCLG+M+R+
Sbjct: 522 YGMDEYLELKYVCLGNMDRQ 541
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555230|ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/508 (79%), Positives = 459/508 (90%), Gaps = 3/508 (0%)
Query: 25 MQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIA 84
MQ +P +R+MS+ +SV +L SGLLRTQGLIGGKW DAYDGKT++V+NPATGE I
Sbjct: 32 MQPSSPPLTRKMSMDAQSVASQLNSSGLLRTQGLIGGKWSDAYDGKTIKVYNPATGESIV 91
Query: 85 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGK 144
+V+CMGG+ET DAIS+A+DA+ SWSK TAAERSK LRKWYDLLM HKEEL QLITLEQGK
Sbjct: 92 DVACMGGRETNDAISAAYDAYGSWSKTTAAERSKFLRKWYDLLMVHKEELAQLITLEQGK 151
Query: 145 PLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPL 204
PLKE+VGE++YGA FIEF AEEAKR+YG+IIPA L DRRLFVLKQPVGV GAITPWNFPL
Sbjct: 152 PLKESVGEINYGAGFIEFAAEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPL 211
Query: 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 264
AMITRKVGPALACGCTVV+KPSE TPLTALAAAEL++QAGIPPGVVNVVMGNAPDIGDAL
Sbjct: 212 AMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVVMGNAPDIGDAL 271
Query: 265 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGA 324
L SPQVRKITFTGSTAVGKKLMAG+A TVKK VSLELGGNAPCIVFDDADL+VAV G
Sbjct: 272 LASPQVRKITFTGSTAVGKKLMAGSAETVKK---VSLELGGNAPCIVFDDADLDVAVKGT 328
Query: 325 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 384
LAAKFRNSGQTCVCANR++VQEGIYEKFA+A V+N+KVGDGF EGV QGPLIN+AA+
Sbjct: 329 LAAKFRNSGQTCVCANRIIVQEGIYEKFANALRDTVQNMKVGDGFSEGVAQGPLINEAAV 388
Query: 385 EKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444
+KVE+ + DA SKGAKV+LGG+RHSLG TFYEPTV+S+V S+M +SREE FGPVAPLL F
Sbjct: 389 KKVESLIHDATSKGAKVILGGKRHSLGFTFYEPTVISDVNSDMRISREEAFGPVAPLLRF 448
Query: 445 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQ 504
KTEE+AI +ANDTNAGL +YIFTN++QR+WRV+EALEYGLVGVNEG+ISTEVAPFGG KQ
Sbjct: 449 KTEEDAIRIANDTNAGLGSYIFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQ 508
Query: 505 SGLGREGSKYGMDEFLEIKYVCLGDMNR 532
SGLGREGSKYGMDE+LEIKYVCLG+M++
Sbjct: 509 SGLGREGSKYGMDEYLEIKYVCLGNMHK 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350538647|ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum] gi|171854593|dbj|BAG16487.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/498 (81%), Positives = 456/498 (91%), Gaps = 3/498 (0%)
Query: 34 RQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKE 93
R M+ +SV +L SGLLR+Q LIGGKW+DAYDGKT++VHNPATGEVI +V CMGG+E
Sbjct: 28 RLMTTDTQSVAAKLSSSGLLRSQALIGGKWVDAYDGKTIKVHNPATGEVITDVPCMGGRE 87
Query: 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153
T DAISSA+DAF+SWSKLTAAERS+ LRKWYDL+MAHKEELGQL+TLEQGKPLKEA+GEV
Sbjct: 88 TNDAISSAYDAFSSWSKLTAAERSRYLRKWYDLIMAHKEELGQLMTLEQGKPLKEAIGEV 147
Query: 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213
YGA FIEF AEE KR+YG+IIP+ L DRRLFVLKQPVGV GAITPWNFPLAMITRKVGP
Sbjct: 148 SYGAGFIEFSAEEGKRIYGDIIPSPLADRRLFVLKQPVGVVGAITPWNFPLAMITRKVGP 207
Query: 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 273
ALACGCTVV+KPSE TPLTALAAAEL++QAGIPPGVVNVVMGNAPDIGDALL SPQVRKI
Sbjct: 208 ALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKI 267
Query: 274 TFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 333
TFTGST VGKKLM GAA TVKK VSLELGGNAPCI+FDDADL VA+ GALA KFRN+G
Sbjct: 268 TFTGSTKVGKKLMEGAAATVKK---VSLELGGNAPCIIFDDADLEVALKGALATKFRNTG 324
Query: 334 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393
QTCVCANR+LVQEGIY+KFA+AF+KAV+N+KVGDGF EGV QGPLIN+AA++KVE FV++
Sbjct: 325 QTCVCANRILVQEGIYDKFANAFAKAVQNMKVGDGFTEGVEQGPLINEAAVQKVEYFVDE 384
Query: 394 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 453
A SKGAKVL+GG+RHSLGMTFYEPTV++ V SEML+++EEVFGPVAPLL FKT+EEAI M
Sbjct: 385 ATSKGAKVLVGGKRHSLGMTFYEPTVVTGVNSEMLLAKEEVFGPVAPLLKFKTDEEAIQM 444
Query: 454 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 513
ANDTNAGLAAYIF+ N++R WRV+EALEYG+VGVNEGL+STEVAPFGGVKQSGLGREGSK
Sbjct: 445 ANDTNAGLAAYIFSTNIKRAWRVTEALEYGIVGVNEGLVSTEVAPFGGVKQSGLGREGSK 504
Query: 514 YGMDEFLEIKYVCLGDMN 531
YGMDE+LE+KYVCLG M+
Sbjct: 505 YGMDEYLEMKYVCLGSMS 522
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528645|ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/509 (78%), Positives = 456/509 (89%), Gaps = 3/509 (0%)
Query: 25 MQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIA 84
MQ +P +R+MS +S+ +L SGLLRTQGLI GKW DAYDGKT++V+NPATGE +
Sbjct: 32 MQPSSPPLTRKMSTDAQSIASQLNSSGLLRTQGLIAGKWSDAYDGKTIKVYNPATGESVV 91
Query: 85 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGK 144
+V+CMGG+ET DAIS+A+DA+ SWSK TAAERSK LRKWYDLLM HKEEL QLITLEQGK
Sbjct: 92 DVACMGGRETNDAISAAYDAYGSWSKTTAAERSKLLRKWYDLLMVHKEELAQLITLEQGK 151
Query: 145 PLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPL 204
PLKE+VGE+ YGA FIEF AEEAKR+YG+I+PA DRRLFVLKQPVGV GAITPWNFPL
Sbjct: 152 PLKESVGEIVYGAGFIEFAAEEAKRIYGDIVPAPFSDRRLFVLKQPVGVVGAITPWNFPL 211
Query: 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 264
AMITRKVGPALACGCTVV+KPSE TPLTALAA EL++QAGIPPGVVNVVMGNAPDIGDAL
Sbjct: 212 AMITRKVGPALACGCTVVIKPSELTPLTALAAVELSIQAGIPPGVVNVVMGNAPDIGDAL 271
Query: 265 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGA 324
L SPQVRKITFTGSTAVGKKLMAG+A TVKK VSLELGGNAPCIVFDDADL+VAV G
Sbjct: 272 LASPQVRKITFTGSTAVGKKLMAGSAETVKK---VSLELGGNAPCIVFDDADLDVAVKGT 328
Query: 325 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 384
LAAKFRNSGQTCVCANR++VQEGIYEKFA+A AV+N+KVGDGF EGV QGPLIN+AA+
Sbjct: 329 LAAKFRNSGQTCVCANRIIVQEGIYEKFANALRDAVQNMKVGDGFSEGVSQGPLINEAAV 388
Query: 385 EKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444
+KVE+ + DA SKGAKV+LGG+RHSLG+TFYEPTV+S+V S+M +SREE FGPVAPLL F
Sbjct: 389 KKVESLIHDATSKGAKVILGGKRHSLGLTFYEPTVISDVNSDMHISREEAFGPVAPLLRF 448
Query: 445 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQ 504
KTEEEAI +ANDTNAGL +Y+FTN++QR+WRV+EALEYGLVGVNEG+ISTEVAPFGG KQ
Sbjct: 449 KTEEEAIRIANDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQ 508
Query: 505 SGLGREGSKYGMDEFLEIKYVCLGDMNRK 533
SGLGREGSKYGMDE+LEIKYVC G+MN++
Sbjct: 509 SGLGREGSKYGMDEYLEIKYVCFGNMNKE 537
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255577875|ref|XP_002529810.1| succinate semialdehyde dehydrogenase, putative [Ricinus communis] gi|223530687|gb|EEF32559.1| succinate semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/495 (83%), Positives = 460/495 (92%), Gaps = 3/495 (0%)
Query: 31 AFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMG 90
AF+ ++ + +S+ RLR++GLLRTQGLIGGKW DAYDGKT++VHNPATGEVIA+V CMG
Sbjct: 105 AFTSEVCMKTESLAARLRNAGLLRTQGLIGGKWTDAYDGKTIQVHNPATGEVIADVPCMG 164
Query: 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV 150
G ETKDAISSA DAF SWSKLTA+ERSK LR+W+DLL+AHKEELGQLITLEQGKPLKEA+
Sbjct: 165 GNETKDAISSAHDAFQSWSKLTASERSKHLRRWFDLLIAHKEELGQLITLEQGKPLKEAI 224
Query: 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
GEV YGA FIEF+AEEAKRVYG+IIPATL DRRL VLKQPVGV GAITPWNFPLAMITRK
Sbjct: 225 GEVSYGASFIEFFAEEAKRVYGDIIPATLGDRRLLVLKQPVGVVGAITPWNFPLAMITRK 284
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 270
VGPALACGCTVVVKPSE TPLTALAAAELALQAGIPPGV+N+VMG APDIGDALL SPQV
Sbjct: 285 VGPALACGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNLVMGKAPDIGDALLASPQV 344
Query: 271 RKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 330
RKITFTGSTAVGKKLM GAA TVK RVSLELGGNAPCIVFDDADL+VAV G+LAAKFR
Sbjct: 345 RKITFTGSTAVGKKLMEGAARTVK---RVSLELGGNAPCIVFDDADLDVAVKGSLAAKFR 401
Query: 331 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 390
NSGQTCVCANR++VQEGIY+KFA+ FS+AV+NL+VGDGF EGV QGPLIN+AAL+KVE+F
Sbjct: 402 NSGQTCVCANRLIVQEGIYDKFAETFSRAVQNLQVGDGFTEGVAQGPLINEAALQKVESF 461
Query: 391 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450
V+DA+SKGAKVL+GG+RHSLG TFYEPTV+S+VKSEM+VSREEVFGPVAP+L FKTEEEA
Sbjct: 462 VQDAISKGAKVLIGGKRHSLGRTFYEPTVISDVKSEMVVSREEVFGPVAPILRFKTEEEA 521
Query: 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 510
I +ANDTNAGLAAYIFTNN QR+WRV+EALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE
Sbjct: 522 ISIANDTNAGLAAYIFTNNTQRSWRVAEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 581
Query: 511 GSKYGMDEFLEIKYV 525
GSKYGMDE+LE+ V
Sbjct: 582 GSKYGMDEYLEVSIV 596
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224109088|ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|222864119|gb|EEF01250.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/510 (81%), Positives = 464/510 (90%), Gaps = 3/510 (0%)
Query: 24 SMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVI 83
S +P SR MS+ +++ +L SGLL+TQGLI GKW+DA DG T++V NPATGEV+
Sbjct: 30 STNRTSPPLSRHMSMKSENLVSKLTSSGLLKTQGLIDGKWVDANDGDTIKVLNPATGEVV 89
Query: 84 ANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG 143
A V CMG ET +AISSA+DAF SWSKLTA+ERS+ +RKWYDLL+AHKEELGQLITLEQG
Sbjct: 90 AIVPCMGQSETNNAISSAYDAFRSWSKLTASERSQRIRKWYDLLIAHKEELGQLITLEQG 149
Query: 144 KPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 203
KPLKEA+GEV YGA FIEFYAEEAKRVYG+IIPATL DRRLFVLKQPVGV GAITPWNFP
Sbjct: 150 KPLKEAMGEVSYGASFIEFYAEEAKRVYGDIIPATLGDRRLFVLKQPVGVVGAITPWNFP 209
Query: 204 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDA 263
LAMITRKVGPALACGCTVV+KPSE TPLTALAAAELALQAGIPPGV+NVVMG APDIGDA
Sbjct: 210 LAMITRKVGPALACGCTVVLKPSELTPLTALAAAELALQAGIPPGVLNVVMGKAPDIGDA 269
Query: 264 LLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNG 323
LL S +VRKITFTGSTAVGKKLMAGAAGTVK R+SLELGGNAPCIVFDDADL+VAV G
Sbjct: 270 LLASHEVRKITFTGSTAVGKKLMAGAAGTVK---RLSLELGGNAPCIVFDDADLDVAVKG 326
Query: 324 ALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAA 383
+LAAKFRNSGQTCVCANR++VQEGIY+KFAD+FSKAV++++VGDGF EGV QGPLIN+AA
Sbjct: 327 SLAAKFRNSGQTCVCANRIIVQEGIYDKFADSFSKAVQSMQVGDGFSEGVTQGPLINEAA 386
Query: 384 LEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 443
++KVE+FV+DA+ KGAKVLLGG+RHSLGM FYEPT++SNV ML+SREEVFGPVAPLL
Sbjct: 387 VQKVESFVQDAIFKGAKVLLGGKRHSLGMNFYEPTIISNVTEAMLLSREEVFGPVAPLLR 446
Query: 444 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVK 503
FKTEEEAI MAN+T AGLAAYIFTNN+QR+WRV+EALEYGLVGVNEGLISTEVAPFGGVK
Sbjct: 447 FKTEEEAILMANNTKAGLAAYIFTNNVQRSWRVTEALEYGLVGVNEGLISTEVAPFGGVK 506
Query: 504 QSGLGREGSKYGMDEFLEIKYVCLGDMNRK 533
QSGLGREGSKYGMDE+LE+KYVCLGDMNRK
Sbjct: 507 QSGLGREGSKYGMDEYLEMKYVCLGDMNRK 536
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15219379|ref|NP_178062.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana] gi|118575126|sp|Q9SAK4.2|SSDH_ARATH RecName: Full=Succinate-semialdehyde dehydrogenase, mitochondrial; Short=At-SSADH1; AltName: Full=Aldehyde dehydrogenase family 5 member F1; AltName: Full=NAD(+)-dependent succinic semialdehyde dehydrogenase; Flags: Precursor gi|6684442|gb|AAF23590.1|AF117335_1 succinic semialdehyde dehydrogenase [Arabidopsis thaliana] gi|16226915|gb|AAL16297.1|AF428367_1 At1g79440/T8K14_14 [Arabidopsis thaliana] gi|15810165|gb|AAL07226.1| putative succinic semialdehyde dehydrogenase gabD [Arabidopsis thaliana] gi|332198122|gb|AEE36243.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/532 (77%), Positives = 474/532 (89%), Gaps = 5/532 (0%)
Query: 1 MTLSGVARVAFVGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIG 60
M + ARVA G R++ +SH + + RQMS+ +SV+++LR SGLLRTQGLIG
Sbjct: 1 MVIGAAARVAIGGCRKLISSHTSLL--LVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIG 58
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
GKW+D+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK L
Sbjct: 59 GKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVL 118
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
R+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L
Sbjct: 119 RRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLS 178
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA 240
DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TPLTALAAAELA
Sbjct: 179 DRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELA 238
Query: 241 LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVS 300
LQAG+PPG +NVVMGNAP+IGDALLTSPQVRKITFTGSTAVGKKLMA AA TVKK VS
Sbjct: 239 LQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKK---VS 295
Query: 301 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 360
LELGGNAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV
Sbjct: 296 LELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAV 355
Query: 361 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 420
+ L+VGDGF +G QGPLIN AA++KVETFV+DAVSKGAK+++GG+RHSLGMTFYEPTV+
Sbjct: 356 QKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVI 415
Query: 421 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 480
+V M++S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EAL
Sbjct: 416 RDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEAL 475
Query: 481 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 532
EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 476 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842727|ref|XP_002889245.1| ALDH5F1 [Arabidopsis lyrata subsp. lyrata] gi|297335086|gb|EFH65504.1| ALDH5F1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/532 (77%), Positives = 472/532 (88%), Gaps = 6/532 (1%)
Query: 1 MTLSGVARVAFVGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIG 60
M + ARVA G R++ +SH + S + RQMS+ +SV+++LR SGLLRTQGLIG
Sbjct: 1 MVIGAAARVAIGGCRKLVSSHTSLLVS---SQCRQMSMDAQSVSEKLRSSGLLRTQGLIG 57
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
GKWID+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK L
Sbjct: 58 GKWIDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKIL 117
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
R+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L
Sbjct: 118 RRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLS 177
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA 240
DRRL VLKQPVGV GAI PWNFPLAMITRKVGPALA GCTVVVKPSE TPLTALAAAELA
Sbjct: 178 DRRLLVLKQPVGVVGAIAPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELA 237
Query: 241 LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVS 300
LQAG+PP +NVVMGNAP+IGDALL+S QVRKITFTGSTAVGKKLMA AA TVKK VS
Sbjct: 238 LQAGVPPVALNVVMGNAPEIGDALLSSRQVRKITFTGSTAVGKKLMAAAAPTVKK---VS 294
Query: 301 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 360
LELGGNAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV
Sbjct: 295 LELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAV 354
Query: 361 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 420
+ L+VGDGF EG QGPLIN AA++KV+TF +DAVSKGAK++LGG+RHSLG TFYEPTV+
Sbjct: 355 QKLEVGDGFKEGTTQGPLINDAAVQKVQTFQQDAVSKGAKIILGGKRHSLGSTFYEPTVI 414
Query: 421 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 480
+V ++ML+S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EAL
Sbjct: 415 RDVSNDMLMSKEEIFGPVAPLIRFKTEEDAIRLANDTIAGLAAYIFTNSVQRSWRVFEAL 474
Query: 481 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 532
EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 475 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 526
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462297|ref|XP_002265514.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/530 (76%), Positives = 467/530 (88%), Gaps = 6/530 (1%)
Query: 5 GVARVAFVGSRRIFASHLPSMQSY---TPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGG 61
G++++ + S H P S + +RQ+S+ +++ RL SGLLR+Q LIGG
Sbjct: 2 GISQMGLLRSSCSALCHGPRTASVLRPSAVLTRQISMDTQNLVARLNSSGLLRSQCLIGG 61
Query: 62 KWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLR 121
KW +AYDGKT+ VHNPATG+V+ NV CMGG+ET DAIS A++AF SWSKLTAAERSK LR
Sbjct: 62 KWTEAYDGKTIPVHNPATGDVLVNVPCMGGQETNDAISVAYEAFLSWSKLTAAERSKRLR 121
Query: 122 KWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD 181
KWYDLL+A+KEELGQ+ITLEQGKPLKEA+GEV+YGA FIEF AEEAKR+YG+IIP+ L D
Sbjct: 122 KWYDLLIANKEELGQIITLEQGKPLKEAIGEVNYGAAFIEFSAEEAKRIYGDIIPSPLAD 181
Query: 182 RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL 241
RRL VLKQPVGV GAITPWNFPLAMITRKVGPALACGCTVV+KPSE TPLTALAAAELAL
Sbjct: 182 RRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELAL 241
Query: 242 QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSL 301
QAGIPPG VNVV GNAP+IGDALL S QVRKITFTGSTAVGKKLMAGAA TVKK VSL
Sbjct: 242 QAGIPPGAVNVVFGNAPEIGDALLASRQVRKITFTGSTAVGKKLMAGAAQTVKK---VSL 298
Query: 302 ELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK 361
ELGGNAPCI+FDDADL VAV GAL KFRNSGQTCVCANR+LVQEGIYEKFA AFS+AV+
Sbjct: 299 ELGGNAPCIIFDDADLEVAVKGALGTKFRNSGQTCVCANRILVQEGIYEKFAIAFSQAVQ 358
Query: 362 NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS 421
+++VG+GF EGVVQGPLIN+AA++KVE+FV+DAVSKGAKVLLGG+RHSLGMTFYEPTV+
Sbjct: 359 SMQVGEGFTEGVVQGPLINEAAVQKVESFVKDAVSKGAKVLLGGKRHSLGMTFYEPTVIG 418
Query: 422 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 481
++K++ML++R EVFGPVAPLL FKTEEEAI +ANDTNAGLAAY+FT N+QR WRV+EALE
Sbjct: 419 DIKNDMLIARNEVFGPVAPLLRFKTEEEAIRIANDTNAGLAAYVFTENVQRMWRVTEALE 478
Query: 482 YGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 531
YGLVGVNEGL+STEVAPFGGVK+SGLGREGSKYGMDEFLE+KYVC G+++
Sbjct: 479 YGLVGVNEGLVSTEVAPFGGVKESGLGREGSKYGMDEFLEMKYVCFGNIS 528
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736107|emb|CBI24145.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/500 (80%), Positives = 456/500 (91%), Gaps = 3/500 (0%)
Query: 32 FSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGG 91
+RQ+S+ +++ RL SGLLR+Q LIGGKW +AYDGKT+ VHNPATG+V+ NV CMGG
Sbjct: 27 LTRQISMDTQNLVARLNSSGLLRSQCLIGGKWTEAYDGKTIPVHNPATGDVLVNVPCMGG 86
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151
+ET DAIS A++AF SWSKLTAAERSK LRKWYDLL+A+KEELGQ+ITLEQGKPLKEA+G
Sbjct: 87 QETNDAISVAYEAFLSWSKLTAAERSKRLRKWYDLLIANKEELGQIITLEQGKPLKEAIG 146
Query: 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211
EV+YGA FIEF AEEAKR+YG+IIP+ L DRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 147 EVNYGAAFIEFSAEEAKRIYGDIIPSPLADRRLLVLKQPVGVVGAITPWNFPLAMITRKV 206
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 271
GPALACGCTVV+KPSE TPLTALAAAELALQAGIPPG VNVV GNAP+IGDALL S QVR
Sbjct: 207 GPALACGCTVVIKPSELTPLTALAAAELALQAGIPPGAVNVVFGNAPEIGDALLASRQVR 266
Query: 272 KITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331
KITFTGSTAVGKKLMAGAA TVKK VSLELGGNAPCI+FDDADL VAV GAL KFRN
Sbjct: 267 KITFTGSTAVGKKLMAGAAQTVKK---VSLELGGNAPCIIFDDADLEVAVKGALGTKFRN 323
Query: 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391
SGQTCVCANR+LVQEGIYEKFA AFS+AV++++VG+GF EGVVQGPLIN+AA++KVE+FV
Sbjct: 324 SGQTCVCANRILVQEGIYEKFAIAFSQAVQSMQVGEGFTEGVVQGPLINEAAVQKVESFV 383
Query: 392 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451
+DAVSKGAKVLLGG+RHSLGMTFYEPTV+ ++K++ML++R EVFGPVAPLL FKTEEEAI
Sbjct: 384 KDAVSKGAKVLLGGKRHSLGMTFYEPTVIGDIKNDMLIARNEVFGPVAPLLRFKTEEEAI 443
Query: 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 511
+ANDTNAGLAAY+FT N+QR WRV+EALEYGLVGVNEGL+STEVAPFGGVK+SGLGREG
Sbjct: 444 RIANDTNAGLAAYVFTENVQRMWRVTEALEYGLVGVNEGLVSTEVAPFGGVKESGLGREG 503
Query: 512 SKYGMDEFLEIKYVCLGDMN 531
SKYGMDEFLE+KYVC G+++
Sbjct: 504 SKYGMDEFLEMKYVCFGNIS 523
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 533 | ||||||
| TAIR|locus:2206405 | 528 | ALDH5F1 "AT1G79440" [Arabidops | 0.988 | 0.998 | 0.753 | 4e-216 | |
| UNIPROTKB|Q9I6M5 | 483 | gabD "Succinate-semialdehyde d | 0.900 | 0.993 | 0.561 | 1.6e-148 | |
| UNIPROTKB|P25526 | 482 | gabD [Escherichia coli K-12 (t | 0.900 | 0.995 | 0.554 | 1.7e-146 | |
| UNIPROTKB|E1BDP3 | 526 | ALDH5A1 "Uncharacterized prote | 0.893 | 0.904 | 0.577 | 1.2e-145 | |
| TIGR_CMR|SO_1275 | 482 | SO_1275 "succinate-semialdehyd | 0.896 | 0.991 | 0.575 | 8.4e-145 | |
| UNIPROTKB|Q88RC0 | 480 | gabD "Succinate-semialdehyde d | 0.894 | 0.993 | 0.556 | 1.6e-143 | |
| UNIPROTKB|F1RUE3 | 537 | ALDH5A1 "Uncharacterized prote | 0.893 | 0.886 | 0.566 | 5.3e-143 | |
| UNIPROTKB|Q3MSM3 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.893 | 0.889 | 0.564 | 2.9e-142 | |
| UNIPROTKB|Q6A2H2 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.893 | 0.889 | 0.560 | 6.1e-142 | |
| UNIPROTKB|P51649 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.893 | 0.889 | 0.560 | 1.3e-141 |
| TAIR|locus:2206405 ALDH5F1 "AT1G79440" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2088 (740.1 bits), Expect = 4.0e-216, P = 4.0e-216
Identities = 401/532 (75%), Positives = 461/532 (86%)
Query: 1 MTLSGVARVAFVGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIG 60
M + ARVA G R++ +SH + + RQMS+ +SV+++LR SGLLRTQGLIG
Sbjct: 1 MVIGAAARVAIGGCRKLISSHTSLL--LVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIG 58
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
GKW+D+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK L
Sbjct: 59 GKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVL 118
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
R+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L
Sbjct: 119 RRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLS 178
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXX 240
DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TP
Sbjct: 179 DRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELA 238
Query: 241 XXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVS 300
G+PPG +NVVMGNAP+IGDALLTSPQVRKITFTGSTAVGKKLMA AA TVKKV S
Sbjct: 239 LQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKKV---S 295
Query: 301 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 360
LELGGNAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV
Sbjct: 296 LELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAV 355
Query: 361 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 420
+ L+VGDGF +G QGPLIN AA++KVETFV+DAVSKGAK+++GG+RHSLGMTFYEPTV+
Sbjct: 356 QKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVI 415
Query: 421 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 480
+V M++S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EAL
Sbjct: 416 RDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEAL 475
Query: 481 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 532
EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 476 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
|
|
| UNIPROTKB|Q9I6M5 gabD "Succinate-semialdehyde dehydrogenase" [Pseudomonas aeruginosa PAO1 (taxid:208964)] | Back alignment and assigned GO terms |
|---|
Score = 1450 (515.5 bits), Expect = 1.6e-148, P = 1.6e-148
Identities = 271/483 (56%), Positives = 359/483 (74%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L+D+ L R Q + G W+DA +G+T++V+NPATGE+I +V MG ET+ AI +A A
Sbjct: 2 QLKDAKLFRQQAYVDGAWVDADNGQTIKVNNPATGEIIGSVPKMGAAETRRAIEAADKAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR+W+DL++ ++++L +L+T+EQGKPL EA GE+ Y A F+E++ E
Sbjct: 62 PAWRALTAKERANKLRRWFDLMIENQDDLARLMTIEQGKPLAEAKGEIAYAASFLEWFGE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
EAKR+YG+ IP PD+R+ V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP GIP GV +VV G+A ++G L ++P VRK+TFTGST +G++L
Sbjct: 182 ASQTPYSALALAELAERAGIPKGVFSVVTGSAGEVGGELTSNPIVRKLTFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
MA A +KKV SLELGGNAP IVFDDADL+ AV GAL +K+RN+GQTCVCANR+ VQ
Sbjct: 242 MAECAQDIKKV---SLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRLYVQ 298
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
+G+Y+ F D AV L +G+G GV GPLI+ A+ KVE + DAVSKGAKV+ GG
Sbjct: 299 DGVYDAFVDKLKAAVAKLNIGNGLEAGVTTGPLIDAKAVAKVEEHIADAVSKGAKVVSGG 358
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+ H+LG TF+EPT+L +V LVS++E FGP+AP+ FK E E I M+NDT GLA+Y
Sbjct: 359 KPHALGGTFFEPTILVDVPKNALVSKDETFGPLAPVFRFKDEAEVIAMSNDTEFGLASYF 418
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ +L R +RV+E LEYG+VG+N GLIS EVAPFGG+K SGLGREGSKYG++++LEIKY+
Sbjct: 419 YARDLARVFRVAEQLEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYL 478
Query: 526 CLG 528
CLG
Sbjct: 479 CLG 481
|
|
| UNIPROTKB|P25526 gabD [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
Identities = 268/483 (55%), Positives = 353/483 (73%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 2 KLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AE
Sbjct: 62 PAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP G+P GV NVV G+A +G+ L ++P VRK++FTGST +G++L
Sbjct: 182 ASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
M A +KKV SLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ
Sbjct: 242 MEQCAKDIKKV---SLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQ 298
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
+G+Y++FA+ +AV L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG
Sbjct: 299 DGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGG 358
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+ H G F++PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY
Sbjct: 359 KAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYF 418
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+
Sbjct: 419 YARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYM 478
Query: 526 CLG 528
C+G
Sbjct: 479 CIG 481
|
|
| UNIPROTKB|E1BDP3 ALDH5A1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1423 (506.0 bits), Expect = 1.2e-145, P = 1.2e-145
Identities = 280/485 (57%), Positives = 354/485 (72%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
S LLRT G +GG W+ A T VH+PA+G + V+ G E + A+ +A++AF SW
Sbjct: 47 SALLRTDGFVGGLWVSA--AATFPVHDPASGAELGLVADCGVPEARAAVRAAYEAFCSWR 104
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
++A ERS LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 105 GVSAKERSSLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSANFLEWFSEEARR 164
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II +RR VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 165 VYGDIISTPAKERRALVLKQPVGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 224
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIPPGV NV+ A ++G+AL T P V KI+FTGSTA GK L+
Sbjct: 225 PFSALALAELANQAGIPPGVYNVIPCSQKKAKEVGEALCTDPLVSKISFTGSTATGKVLL 284
Query: 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE 346
AA +VK RVS+ELGG+AP IVFD A+++ AV GA+A+KFRNSGQTCVC+NR LVQ
Sbjct: 285 HHAANSVK---RVSMELGGHAPFIVFDSANVDQAVAGAMASKFRNSGQTCVCSNRFLVQS 341
Query: 347 GIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
GI++ F F++A+K NL VG+GF E QGPLIN A+EKVE V DA+SKGA V+ GG
Sbjct: 342 GIHDSFVKKFAEAIKTNLHVGNGFDERTTQGPLINAKAVEKVEKHVSDAISKGATVVTGG 401
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+RH +G F+EPT+LSNV +ML S+EE FGPVAP++ F TEEEA+ +AN N GLA Y
Sbjct: 402 KRHHVGKNFFEPTLLSNVTRDMLCSQEETFGPVAPVIKFNTEEEAVAIANAANVGLAGYF 461
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYV
Sbjct: 462 YSQDPAQIWRVAERLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 521
Query: 526 CLGDM 530
C G +
Sbjct: 522 CFGGL 526
|
|
| TIGR_CMR|SO_1275 SO_1275 "succinate-semialdehyde dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 1415 (503.2 bits), Expect = 8.4e-145, P = 8.4e-145
Identities = 277/481 (57%), Positives = 348/481 (72%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
L D LLR Q I G+W DA +T+ + NPATG VIA V MG ET+ AI++A A
Sbjct: 3 LNDPSLLRQQCYINGQWCDANSKETVAITNPATGAVIACVPVMGQAETQAAIAAAEAALP 62
Query: 107 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
+W LTA ER LR+W++LL + ++L L+T EQGKPL EA GEV Y A FIE++AEE
Sbjct: 63 AWRALTAKERGAKLRRWFELLNENSDDLALLMTSEQGKPLTEAKGEVTYAASFIEWFAEE 122
Query: 167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226
AKR+YG+ IP D+R+ V+KQPVGV AITPWNFP AMITRK PALA GCT+VVKP+
Sbjct: 123 AKRIYGDTIPGHQGDKRIMVIKQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVKPA 182
Query: 227 EFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
TP GIP GV +V+ G+A IG+ + T+P VRK++FTGST VG KLM
Sbjct: 183 PQTPFTALALAVLAERAGIPAGVFSVITGDAIAIGNEMCTNPIVRKLSFTGSTNVGIKLM 242
Query: 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE 346
A A T+KK+ SLELGGNAP IVFDDA+++ AV GA+ AK+RN+GQTCVCANR+ VQ
Sbjct: 243 AQCAPTLKKL---SLELGGNAPFIVFDDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQA 299
Query: 347 GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 406
G+Y++FA+ S AV LKVG+G GV GPLIN AA+EKV++ +EDA+ KGA VL GG+
Sbjct: 300 GVYDEFAEKLSMAVAKLKVGEGIIAGVTTGPLINAAAVEKVQSHLEDAIKKGATVLAGGK 359
Query: 407 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 466
H LG F+EPTVL+N M V+REE FGP+APL F ++ I ANDT GLAAY +
Sbjct: 360 VHELGGNFFEPTVLTNADKSMRVAREETFGPLAPLFKFNDVDDVIKQANDTEFGLAAYFY 419
Query: 467 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526
++ W+V+E+LEYG+VGVN GLISTEVAPFGG+K SGLGREGSKYG++E+LEIKY+C
Sbjct: 420 GRDISLVWKVAESLEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEIKYIC 479
Query: 527 L 527
+
Sbjct: 480 M 480
|
|
| UNIPROTKB|Q88RC0 gabD "Succinate-semialdehyde dehydrogenase" [Pseudomonas putida KT2440 (taxid:160488)] | Back alignment and assigned GO terms |
|---|
Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
Identities = 268/482 (55%), Positives = 355/482 (73%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L+D+ L R Q I G+W+DA +G+T++V NPATGEVI V MG ET+ AI +A A
Sbjct: 2 QLKDAQLFRQQAYINGEWLDADNGQTIKVTNPATGEVIGTVPKMGTAETRRAIEAADKAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ERS LR+W++L++ ++++L +L+T EQGKPL EA GE+ Y A FIE++AE
Sbjct: 62 PAWRALTAKERSAKLRRWFELMIENQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFAE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
EAKR+YG+ IP PD+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EAKRIYGDTIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP GIP GV++VV G+A ++G L + VRK++FTGST +G++L
Sbjct: 182 ASQTPYSALALVELAHRAGIPAGVLSVVTGSAGEVGGELTGNSLVRKLSFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
M A +KKV SLELGGNAP IVFDDADL+ AV GA+ +K+RN+GQTCVCANR+ VQ
Sbjct: 242 MEECAKDIKKV---SLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQ 298
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
+G+Y+ FA+ + AV LK+G+G EG GPLI+ A+ KV+ +EDAVSKGAKVL GG
Sbjct: 299 DGVYDAFAEKLAAAVAKLKIGNGLEEGTTTGPLIDGKAVAKVQEHIEDAVSKGAKVLSGG 358
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+ + F+EPT+L +V V++EE FGP+APL FK E E I M+NDT GLA+Y
Sbjct: 359 KL--IEGNFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYF 416
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ ++ R +RV+EALEYG+VG+N GLIS EVAPFGG+K SGLGREGSKYG++++LEIKY+
Sbjct: 417 YARDMSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYL 476
Query: 526 CL 527
C+
Sbjct: 477 CI 478
|
|
| UNIPROTKB|F1RUE3 ALDH5A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1398 (497.2 bits), Expect = 5.3e-143, P = 5.3e-143
Identities = 276/487 (56%), Positives = 355/487 (72%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
S LLRT G +GG+W+ A T V++PA+G + V+ G E + A+ +A++AF +W
Sbjct: 56 SALLRTDGFVGGRWLSA--ASTFPVYDPASGAELGLVADCGVSEARAAVRAAYEAFCTWK 113
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
++A ERS LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+ +EEA+R
Sbjct: 114 GVSAKERSSFLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSANFLEWCSEEARR 173
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG++I +RR VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 174 VYGDVIYTPAKERRALVLKQPVGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 233
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIPPGV NV+ A ++G+AL T P V KI+FTGSTA GK L+
Sbjct: 234 PFSALALAQLANQAGIPPGVYNVIPCSQKKAMEVGEALCTDPLVSKISFTGSTATGKVLL 293
Query: 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE 346
AA +VK RVS+ELGG+AP IVFD A+++ AV GA+ +KFRNSGQTCVC+NR LVQ
Sbjct: 294 HHAANSVK---RVSMELGGHAPFIVFDSANVDQAVAGAMVSKFRNSGQTCVCSNRFLVQR 350
Query: 347 GIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
GI++ F F++A+K NL VG+GF E QGPLIN+ A+EKVE V DA+SKGA V+ GG
Sbjct: 351 GIHDSFVKKFAEAIKTNLCVGNGFEERTTQGPLINEKAVEKVEKHVIDAISKGATVVTGG 410
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG--LAA 463
+RH +G F+EPT+LSNV EML SREE FGP+AP++ F TEEEA+ +AN N G ++
Sbjct: 411 KRHQVGKNFFEPTLLSNVTQEMLCSREETFGPLAPVIKFDTEEEAVAIANAANVGWQVSR 470
Query: 464 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
Y ++ +L + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+K
Sbjct: 471 YFYSQDLAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELK 530
Query: 524 YVCLGDM 530
YVC G +
Sbjct: 531 YVCFGGL 537
|
|
| UNIPROTKB|Q3MSM3 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Hylobates lar (taxid:9580)] | Back alignment and assigned GO terms |
|---|
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 274/485 (56%), Positives = 354/485 (72%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW
Sbjct: 56 AALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWR 113
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 114 EVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARR 173
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 174 VYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 233
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+
Sbjct: 234 PFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 293
Query: 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE 346
AA +VK RVS+ELGG AP IVFD A+++ AV GALA+KFRN+GQTCVC+NR LVQ
Sbjct: 294 HHAANSVK---RVSMELGGLAPFIVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQR 350
Query: 347 GIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
GI++ F AF++A+K NL VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG
Sbjct: 351 GIHDAFVKAFAEAMKKNLHVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGG 410
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y
Sbjct: 411 KRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYF 470
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYV
Sbjct: 471 YSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 530
Query: 526 CLGDM 530
C G +
Sbjct: 531 CYGGL 535
|
|
| UNIPROTKB|Q6A2H2 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Pongo pygmaeus (taxid:9600)] | Back alignment and assigned GO terms |
|---|
Score = 1388 (493.7 bits), Expect = 6.1e-142, P = 6.1e-142
Identities = 272/485 (56%), Positives = 354/485 (72%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW
Sbjct: 56 AALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWR 113
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+++A ERS LRKWY L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 114 EVSAKERSSLLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARR 173
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 174 VYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 233
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+
Sbjct: 234 PFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 293
Query: 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE 346
AA +VK RVS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ
Sbjct: 294 HHAANSVK---RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQR 350
Query: 347 GIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
GI++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG
Sbjct: 351 GIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGG 410
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y
Sbjct: 411 KRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGYF 470
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYV
Sbjct: 471 YSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 530
Query: 526 CLGDM 530
C G +
Sbjct: 531 CYGGL 535
|
|
| UNIPROTKB|P51649 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 272/485 (56%), Positives = 354/485 (72%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 56 AALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWR 113
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 114 EVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARR 173
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 174 VYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 233
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+
Sbjct: 234 PFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 293
Query: 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE 346
AA +VK RVS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ
Sbjct: 294 HHAANSVK---RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQR 350
Query: 347 GIYEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
GI++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG
Sbjct: 351 GIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGG 410
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y
Sbjct: 411 KRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYF 470
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYV
Sbjct: 471 YSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 530
Query: 526 CLGDM 530
C G +
Sbjct: 531 CYGGL 535
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8BWF0 | SSDH_MOUSE | 1, ., 2, ., 1, ., 2, 4 | 0.5734 | 0.8893 | 0.9063 | yes | no |
| P51649 | SSDH_HUMAN | 1, ., 2, ., 1, ., 2, 4 | 0.5781 | 0.8949 | 0.8915 | yes | no |
| P25526 | GABD_ECOLI | 1, ., 2, ., 1, ., 7, 9 | 0.5714 | 0.9005 | 0.9958 | N/A | no |
| Q9US47 | SSDH1_SCHPO | 1, ., 2, ., 1, ., 1, 6 | 0.4970 | 0.9305 | 0.9067 | yes | no |
| Q9SAK4 | SSDH_ARATH | 1, ., 2, ., 1, ., 2, 4 | 0.7781 | 0.9887 | 0.9981 | yes | no |
| Q6A2H2 | SSDH_PONPY | 1, ., 2, ., 1, ., 2, 4 | 0.5781 | 0.8949 | 0.8915 | N/A | no |
| P94428 | GABD_BACSU | 1, ., 2, ., 1, ., 7, 9 | 0.5391 | 0.8517 | 0.9826 | yes | no |
| Q6A2H0 | SSDH_PANTR | 1, ., 2, ., 1, ., 2, 4 | 0.5781 | 0.8949 | 0.8915 | yes | no |
| Q6A2H1 | SSDH_GORGO | 1, ., 2, ., 1, ., 2, 4 | 0.5781 | 0.8949 | 0.8915 | N/A | no |
| Q3MSM4 | SSDH_PANPA | 1, ., 2, ., 1, ., 2, 4 | 0.5781 | 0.8949 | 0.8915 | N/A | no |
| P51650 | SSDH_RAT | 1, ., 2, ., 1, ., 2, 4 | 0.5776 | 0.8893 | 0.9063 | yes | no |
| Q3MSM3 | SSDH_HYLLA | 1, ., 2, ., 1, ., 2, 4 | 0.5823 | 0.8949 | 0.8915 | N/A | no |
| P38067 | UGA2_YEAST | 1, ., 2, ., 1, ., 1, 6 | 0.4948 | 0.9005 | 0.9657 | yes | no |
| B9F3B6 | SSDH_ORYSJ | 1, ., 2, ., 1, ., 2, 4 | 0.7576 | 0.9662 | 0.9772 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 533 | |||
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 0.0 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 0.0 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 0.0 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 1e-179 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-177 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-176 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-168 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-166 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-165 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-163 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-161 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-158 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-157 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-155 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-153 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-152 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-151 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-151 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 1e-150 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-149 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-148 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-148 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-148 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-147 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-145 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-145 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-144 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-144 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 1e-144 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-142 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-142 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-141 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-140 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-140 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-139 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-139 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-138 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-138 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-138 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-136 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-135 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-134 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 1e-133 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-132 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-131 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-130 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-130 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-126 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-126 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-125 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-125 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-124 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-121 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-120 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-120 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-118 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-116 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-116 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-113 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-112 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-110 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-107 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 1e-105 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 1e-105 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-102 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-101 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 1e-100 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-97 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 3e-95 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 7e-92 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 2e-90 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 8e-86 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 8e-84 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 8e-83 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-78 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 2e-78 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 5e-77 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 1e-75 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 2e-73 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 8e-73 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 8e-72 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 2e-70 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 2e-70 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 3e-69 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-68 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 8e-68 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 7e-67 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 3e-65 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 3e-62 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 5e-59 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 2e-54 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 8e-54 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 2e-53 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 7e-53 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-44 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 4e-43 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 6e-43 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 4e-42 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 2e-39 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 6e-33 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 5e-30 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 3e-28 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 1e-25 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 1e-23 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 2e-22 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 9e-10 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 2e-08 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 3e-08 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 3e-08 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 5e-08 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 9e-08 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 2e-06 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 4e-05 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 6e-04 | |
| PRK13805 | 862 | PRK13805, PRK13805, bifunctional acetaldehyde-CoA/ | 0.003 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 947 bits (2450), Expect = 0.0
Identities = 404/501 (80%), Positives = 450/501 (89%), Gaps = 3/501 (0%)
Query: 31 AFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMG 90
+R S+ +S +LR++GLLRTQGLIGGKW DAYDGKT V+NPATGEVIANV CMG
Sbjct: 1 PSTRASSMDAQSALVKLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMG 60
Query: 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV 150
ET DAI+SA DAF SWSKLTA+ERSK LR+WYDL++A+KE+L QL+TLEQGKPLKEA+
Sbjct: 61 RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI 120
Query: 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
GEV YGA F+E++AEEAKRVYG+IIP+ PDRRL VLKQPVGV GAITPWNFPLAMITRK
Sbjct: 121 GEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRK 180
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 270
VGPALA GCTVVVKPSE TPLTALAAAELALQAGIPPGV+NVVMG+AP+IGDALL SP+V
Sbjct: 181 VGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKV 240
Query: 271 RKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 330
RKITFTGSTAVGKKLMAGAA TVK RVSLELGGNAP IVFDDADL+VAV GALA+KFR
Sbjct: 241 RKITFTGSTAVGKKLMAGAAATVK---RVSLELGGNAPFIVFDDADLDVAVKGALASKFR 297
Query: 331 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 390
NSGQTCVCANR+LVQEGIY+KFA+AFSKAV+ L VGDGF EGV QGPLIN+AA++KVE+
Sbjct: 298 NSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESH 357
Query: 391 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450
V+DAVSKGAKVLLGG+RHSLG TFYEPTVL +V +ML+ REEVFGPVAPL FKTEEEA
Sbjct: 358 VQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEA 417
Query: 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE 510
I +ANDT AGLAAYIFT +LQR WRVSEALEYG+VGVNEGLISTEVAPFGGVKQSGLGRE
Sbjct: 418 IAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGRE 477
Query: 511 GSKYGMDEFLEIKYVCLGDMN 531
GSKYG+DE+LEIKYVCLG+MN
Sbjct: 478 GSKYGIDEYLEIKYVCLGNMN 498
|
Length = 498 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 808 bits (2090), Expect = 0.0
Identities = 289/454 (63%), Positives = 350/454 (77%), Gaps = 3/454 (0%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPATGEVI V G + AI +A AF +W K TA ER+ LR+W DL+ E+
Sbjct: 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAED 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L +L+TLEQGKPL EA GEVDY A F+E++AEEA+R+YG IP+ P +R+ V+KQPVGV
Sbjct: 61 LARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGV 120
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
AITPWNFP AMITRK+ PALA GCTVV+KP+E TPL+ALA AELA +AG+P GV+NVV
Sbjct: 121 VAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVV 180
Query: 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313
G+ +IG+AL SP+VRKI+FTGSTAVGK LMA AA TVK RVSLELGGNAP IVFD
Sbjct: 181 TGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVK---RVSLELGGNAPFIVFD 237
Query: 314 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373
DADL+ AV+GA+A+KFRN+GQTCVCANR+ V E IY++F + + VK LKVG+G EG
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297
Query: 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 433
GPLIN+ A+EKVE VEDAV+KGAKVL GG+R LG FYEPTVL++V +ML+ EE
Sbjct: 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEE 357
Query: 434 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 493
FGPVAP++ F TE+E I ANDT GLAAY+FT +L R WRV+EALE G+VG+N GLIS
Sbjct: 358 TFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLIS 417
Query: 494 TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
APFGGVK+SGLGREG K G++E+LE KYV L
Sbjct: 418 DAEAPFGGVKESGLGREGGKEGLEEYLETKYVSL 451
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 683 bits (1764), Expect = 0.0
Identities = 296/451 (65%), Positives = 360/451 (79%), Gaps = 4/451 (0%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V+NPATGE+I +V G ET+ AI +A++AF +W TA ERS LRKWY+L+M +K++
Sbjct: 1 VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L +LITLE GKPLKEA GE+ Y A F+E++AEEAKRVYG+ IP+ D+RL V+KQPVGV
Sbjct: 61 LARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGV 120
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
AITPWNFP AMITRK G ALA GCTVVVKP+E TPL+ALA A LA QAGIP GV+NV+
Sbjct: 121 CAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVI 180
Query: 254 MGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
G+ A ++G+ L TSP VRKI+FTGST VGK LM +A TVKKV S+ELGGNAP IVF
Sbjct: 181 TGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKV---SMELGGNAPFIVF 237
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
DDADL+ AV GA+A+KFRN+GQTCVCANR+ V +GIY++FA ++AVK LKVG+G EG
Sbjct: 238 DDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEG 297
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 432
V QGPLIN+ A+EKVE + DAV KGAKV+ GG+RH LG F+EPTVLSNV ++MLVS+E
Sbjct: 298 VTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKE 357
Query: 433 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 492
E FGP+AP+ F EEE I +ANDT GLAAY F+ +L R WRV+EALEYG+VG+N GLI
Sbjct: 358 ETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLI 417
Query: 493 STEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
S VAPFGGVKQSGLGREGSKYG++E+LE K
Sbjct: 418 SNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 640 bits (1651), Expect = 0.0
Identities = 277/483 (57%), Positives = 366/483 (75%), Gaps = 3/483 (0%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 2 QLNDSTLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR+W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AE
Sbjct: 62 PAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP +ALA AELA++AGIP GV NVV G+A +G L ++P VRK++FTGST +G++L
Sbjct: 182 ASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
M A +KKV SLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ
Sbjct: 242 MEQCAKDIKKV---SLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQ 298
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
+G+Y++FA+ +AV L +GDG +GV GPLI++ A+ KVE + DA+ KGA+V+ GG
Sbjct: 299 DGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGG 358
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+ H LG F++PT+L +V + V++EE FGP+APL FK E + I ANDT GLAAY
Sbjct: 359 KAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYF 418
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+
Sbjct: 419 YARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYM 478
Query: 526 CLG 528
C+G
Sbjct: 479 CIG 481
|
Length = 482 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 609 bits (1574), Expect = 0.0
Identities = 226/464 (48%), Positives = 308/464 (66%), Gaps = 6/464 (1%)
Query: 63 WIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 122
W+D+ +T+EV NPATGEVIA V ++ A+++A AF +W+K +ER+ L K
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLK 59
Query: 123 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDR 182
DLL ++EL +L TLE GKPL EA GEV + +YA A+++ GE +P+ P
Sbjct: 60 AADLLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLPSD-PGV 118
Query: 183 RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ 242
+ ++P+GV GAITPWNFPL + K+ PALA G TVV+KPSE TPLTAL AEL +
Sbjct: 119 LAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEE 178
Query: 243 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLE 302
AG+PPGV+NVV G+ ++GDAL+ P V K++FTGST VG+++ AA +K RV+LE
Sbjct: 179 AGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLK---RVTLE 235
Query: 303 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 362
LGG P IVFDDADL+ AV GA+ F N+GQ C +R+LV E IY++F + +A K+
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295
Query: 363 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN 422
LKVGD GPLI+K E+V +++EDA +GAK+L GG F EPTVL++
Sbjct: 296 LKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLAD 355
Query: 423 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 482
V +M +++EE+FGPV ++ FK E+EAI +ANDT GLAA +FTN+L+R RV+ LE
Sbjct: 356 VTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEA 415
Query: 483 GLVGVNEGLISTEVA-PFGGVKQSGLGREGSKYGMDEFLEIKYV 525
G+V +N+ A PFGG KQSG GREG K G++E+ E K V
Sbjct: 416 GMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 594 bits (1533), Expect = 0.0
Identities = 243/472 (51%), Positives = 325/472 (68%), Gaps = 10/472 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
LI G+W+D T+EV NPATGEVIA V ++ A+++A AF +WS+L+A ER+
Sbjct: 4 LIDGEWVDG--ASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERA 61
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ DLL A EEL LITLE GKP+ EA GE+ A FI +YAEEA+R+ GE IP
Sbjct: 62 AILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPT 121
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
+ V ++P+GV GAITPWNFPLA+ K+ PALA G TVV+KPSE TPL+ALA A
Sbjct: 122 D-KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALA 180
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVC 297
ELA +AG+P GV+NVV G ++GDAL+ P V I+FTGSTAVG+ + A AA +K
Sbjct: 181 ELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLK--- 237
Query: 298 RVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 357
V+LELGG +P IV +DADL+ AV+ A+ F N+GQ C A+R++V E +Y++F +
Sbjct: 238 PVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLV 297
Query: 358 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 417
+LKVGD GPLI++ L++VE ++EDAV++GA++L GG+R G F EP
Sbjct: 298 ARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP--GGYFVEP 355
Query: 418 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 477
T+L V +M ++REE+FGPV P++ FK EEEAI +ANDT GLAA IFT +L R +RV+
Sbjct: 356 TILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVA 415
Query: 478 EALEYGLVGVNEGLISTEV--APFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
LE G+VG+N+ ++ PFGGVKQSGLGREG KYG++EF E+K V +
Sbjct: 416 RRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTI 467
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 564 bits (1455), Expect = 0.0
Identities = 224/433 (51%), Positives = 300/433 (69%), Gaps = 5/433 (1%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYG 156
A+++A AF +W+ L AER+ LRK DLL +EEL L TLE GKP++EA+GEV
Sbjct: 3 AVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARA 62
Query: 157 AKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216
A +YA A+R++GE+IP+ P V ++P+GV GAITPWNFPL + K+ PALA
Sbjct: 63 ADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALA 122
Query: 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276
G TVV+KPSE TPLTAL AEL +AG+PPGV+NVV G+ ++G AL + P+V KI+FT
Sbjct: 123 AGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFT 182
Query: 277 GSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 336
GSTAVGK +M AA +K RV+LELGG +P IVFDDADL+ AV GA+ F N+GQ C
Sbjct: 183 GSTAVGKAIMRAAAENLK---RVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVC 239
Query: 337 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 396
A+R+LV E IY++F + + VK LKVG+ GPLI+ A L++V ++EDA +
Sbjct: 240 TAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKA 299
Query: 397 KGAKVLLGGRR-HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 455
+GAK+L GG+R F PTVL++V +M +++EE+FGPV P++ FK EEEAI +AN
Sbjct: 300 EGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELAN 359
Query: 456 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKY 514
DT GLAA +FT +L+R RV+E LE G V +N+ + E APFGGVKQSG+GREG Y
Sbjct: 360 DTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPY 419
Query: 515 GMDEFLEIKYVCL 527
G++E+ E K V +
Sbjct: 420 GLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 541 bits (1397), Expect = 0.0
Identities = 213/470 (45%), Positives = 299/470 (63%), Gaps = 8/470 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G+++ + G+T++V NPATGEV+A V ++ A+ +A A +W +L A ER+
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAA 61
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 178
LRK DL+ + +EL +LI EQGK L A EV++ A +I++ AE A+R+ GEIIP+
Sbjct: 62 YLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSD 121
Query: 179 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 238
P+ +F+ K P+GV I PWNFP +I RK+ PAL G T+V+KPSE TPL AL AE
Sbjct: 122 RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAE 181
Query: 239 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCR 298
L +AG+P GV+N+V G +GDAL+ P+V I+ TGST G+K+M AA + K
Sbjct: 182 LVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITK--- 238
Query: 299 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 358
VSLELGG AP IV DADL++AV + ++ N GQ C CA RV V E IY++F + +
Sbjct: 239 VSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVE 298
Query: 359 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEP 417
+K +KVGD F GPL+N+AAL+KVE VE AV GA +L GG+R FYEP
Sbjct: 299 KMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEP 358
Query: 418 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 477
TVL+NV+ +M + +EE+FGPV P++ F + +EAI +AND+ GL +YI+T NL R +
Sbjct: 359 TVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRAT 418
Query: 478 EALEYGLVGVNEGLISTEVAP--FGGVKQSGLGREGSKYGMDEFLEIKYV 525
LE+G +N + E G K+SGLG K+G++E+L+ K V
Sbjct: 419 NELEFGETYINRE--NFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVV 466
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 513 bits (1323), Expect = e-179
Identities = 208/475 (43%), Positives = 289/475 (60%), Gaps = 8/475 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS--KLT 112
T I +++D+ GKT NPAT EVI V+ ++ A+ +A AF + K+
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVY 171
ER + L K DL+ ++EL L +L+ GKPL+E A G+V K + +YA A ++
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+ IP + + ++P+GV G I PWNFPL M+ K+ PALA G TVV+KP+E TPL
Sbjct: 124 GKTIP-IDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPL 182
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM-AGAA 290
+AL AEL +AG PPGVVN+V G P G A+ + V KI FTGSTAVG+ +M A A
Sbjct: 183 SALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK 242
Query: 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 350
+KK V+LELGG +P IVFDDADL+ AV A F N GQ C +R+ VQE IY+
Sbjct: 243 SNLKK---VTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYD 299
Query: 351 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 410
+F + F + VGD F QGP ++KA +K+ +++E +GA +L GG RH
Sbjct: 300 EFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGS 359
Query: 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470
F +PTV ++VK +M +++EE+FGPV +L FKTE+E I ANDT GLAA +FT ++
Sbjct: 360 KGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDI 419
Query: 471 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ RVS AL+ G V VN + PFGG KQSG GRE + G++E+ ++K V
Sbjct: 420 NKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAV 474
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 507 bits (1308), Expect = e-177
Identities = 217/459 (47%), Positives = 293/459 (63%), Gaps = 9/459 (1%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
NPATGEV+A V G E A+++A +AF WS+++ AER++ L K DL+ A +E
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 134 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
L L +L+ GKP+ A ++ A F+A+ ++ GE P +VL+QPVG
Sbjct: 61 LALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYP-QDGGALNYVLRQPVG 119
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
VAG ITPWN PL ++T K+ PALA G TVV+KPSE+TPLTA AELA +AG+PPGVVNV
Sbjct: 120 VAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNV 179
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
V G P+ G AL+ P V I+FTG TA G+ +M AA +K VSLELGG P IVF
Sbjct: 180 VHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKP---VSLELGGKNPNIVF 236
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
DADL+ AV+ A+ + F N+G+ C+ +R+LVQ IY++F + F + K LKVGD
Sbjct: 237 ADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPD 296
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEML 428
GPLI+K LEKV +VE A ++GA +L GG R L F EPTV++ + ++
Sbjct: 297 TEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSR 356
Query: 429 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN 488
V++EE+FGPV ++ F EEEAI +ANDT GLAAY++T +L R RV+ LE G V VN
Sbjct: 357 VAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVN 416
Query: 489 EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
L+ PFGGVK SG+GREG Y ++ + E+K VC+
Sbjct: 417 CWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 504 bits (1301), Expect = e-176
Identities = 205/458 (44%), Positives = 281/458 (61%), Gaps = 9/458 (1%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHK 131
NPATGE A V + A+++A AF W KLT ER K LR+ DL+ A+
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV 191
EEL +L T + GK ++E +V Y A++ +YA A ++ G +IP D F ++P+
Sbjct: 61 EELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPL 120
Query: 192 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251
GV AITPWN PL ++ +K+ PALA G TVV+KPSE TP + L A+LA +AG PPGVVN
Sbjct: 121 GVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVN 180
Query: 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311
VV G P+ G+AL+ P V KI FTG T G+ + AA + + V+LELGG +P IV
Sbjct: 181 VVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA---ENLAPVTLELGGKSPNIV 237
Query: 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371
FDDADL+ AVNG +A F +GQTCV +R+LVQ IY++F + + ++VGD
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297
Query: 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEM 427
GPL + LEKVE +V A +GA+VL GG R S F+EPT+L++V ++M
Sbjct: 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDM 357
Query: 428 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 487
+++EEVFGPV ++ F EEEAI +AND+ GLAA I+T +L R RV+ A+E G V V
Sbjct: 358 RIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWV 417
Query: 488 NEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
N + +PFGG K SG+GRE + E+ + K V
Sbjct: 418 NTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSV 455
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 482 bits (1243), Expect = e-168
Identities = 191/450 (42%), Positives = 254/450 (56%), Gaps = 8/450 (1%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPATGEV A+ + A+++A AF WS ER L D + A+ EE
Sbjct: 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEE 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L +L+TLEQGKPL EA EV ++ + A E+I RR+ + ++P+GV
Sbjct: 61 LARLLTLEQGKPLAEAQFEVGGAVAWLRYTASLDLPD--EVIEDD-DTRRVELRRKPLGV 117
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
AI PWNFPL + K+ PAL G TVV+KPS FTPL L ELA + +PPGV+NVV
Sbjct: 118 VAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVV 176
Query: 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313
G ++G AL + P +RKI+FTGSTA GKK+MA AA T+K RV+LELGGN IV
Sbjct: 177 SGGD-ELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLK---RVTLELGGNDAAIVLP 232
Query: 314 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373
D D++ F NSGQ C R+ V E IY++F +A K VGDG G
Sbjct: 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGT 292
Query: 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 433
GP+ NK +KV+ VEDA +KGAKVL GG F PT++ + + EE
Sbjct: 293 TLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEE 352
Query: 434 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 493
FGPV P+L + E+E I AND+ GL A +++++L+R V+ LE G V +N
Sbjct: 353 QFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGAL 412
Query: 494 TEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
APFGG KQSG+G E G+ E+ + +
Sbjct: 413 DPDAPFGGHKQSGIGVEFGIEGLKEYTQTQ 442
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 479 bits (1236), Expect = e-166
Identities = 209/461 (45%), Positives = 292/461 (63%), Gaps = 10/461 (2%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
+EV NPA GEVI V + +E ++AI A A + S L A +R K L K +L+ K
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 187
EEL +L+T+E GKP+K++ EV+ + + AEEAK + GE IP R F +
Sbjct: 61 EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTV 120
Query: 188 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 247
++P+GV GAITP+NFP + K+ PA+A G +VVVKPS TPLTA+ A++ +AG+PP
Sbjct: 121 REPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPP 180
Query: 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307
GV+NVV G ++GD ++T+P+V I+FTGSTAVG + + A GT K +V+LELGG+
Sbjct: 181 GVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGK---KVALELGGSD 237
Query: 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367
P IV DADL AV+ A+ +F N+GQ C R+LV+E +Y+KF + VK LKVGD
Sbjct: 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGD 297
Query: 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM 427
E GPLI+ A+E++E V DAV KG K+L GG+R +F+ PTVL N +M
Sbjct: 298 PLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKR--DEGSFFPPTVLENDTPDM 355
Query: 428 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 487
+V +EEVFGPV P+ K +EEA+ +AN T GL A +FTN++ R +V+ LE G V +
Sbjct: 356 IVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVI 415
Query: 488 NE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
N+ + PFGG K+SG+GREG +Y M E E K + +
Sbjct: 416 NDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 476 bits (1226), Expect = e-165
Identities = 200/473 (42%), Positives = 284/473 (60%), Gaps = 10/473 (2%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAER 116
I G+W++A GKT ++ NPA GEVIA V ++ K AI++A AF+S W L A ER
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L + D + EEL +L TL GK L+E+ ++D A +YA A + GE+
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYD 121
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
P +++PVGV G ITPWN+PL K+ PALA G TVV+KPSE TPLT +A
Sbjct: 122 VP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
EL +AG+P GVVN+V G+ +G L SP V ++FTG TA G+ +M AAG VK
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVK-- 238
Query: 297 CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356
+V+LELGG P IVF DAD AV+ AL F N+GQ C +R+LV+E I++KF A
Sbjct: 239 -KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAAL 297
Query: 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM---- 412
++ K +K+G+G GPL++ EKV ++++ +GA+++ GG+R +
Sbjct: 298 AERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKG 357
Query: 413 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472
F EPT+ +V M + +EE+FGPV + F TEEEAI +ANDT GLA ++T ++ R
Sbjct: 358 YFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIAR 417
Query: 473 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
RV+ L G V +N+ AP+GG KQSG+GRE G++E+ E K++
Sbjct: 418 ANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 471 bits (1215), Expect = e-163
Identities = 210/463 (45%), Positives = 287/463 (61%), Gaps = 17/463 (3%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
+EV +P GEVI V ++ + AI++A + L A ER++ L + LL +
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERR 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 187
EE + I LE GKP+K+A EVD + + AEEAKR+ GE IP R F +
Sbjct: 61 EEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTI 120
Query: 188 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 247
++P+GV AITP+NFPL ++ KVGPA+A G VV+KP+ TPL+AL AEL L+AG+P
Sbjct: 121 REPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPK 180
Query: 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307
G +NVV G+ +GDAL+T P+VR I+FTGS AVG+ + A AG +KK V+LELG NA
Sbjct: 181 GALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAI-ARKAG-LKK---VTLELGSNA 235
Query: 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367
IV DADL AV ++ F N+GQ C+ R+ V E IY++F + F A K L VGD
Sbjct: 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGD 295
Query: 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM 427
E GP+I++A E++E +VE+AV GA++L GG+R EPTVL++V +M
Sbjct: 296 PLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDG---AILEPTVLTDVPPDM 352
Query: 428 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 487
V EEVF PV L F T +EAI MAND+ GL A +FTN+LQ+ + + LE G V +
Sbjct: 353 KVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMI 412
Query: 488 NEGLIST---EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
N+ ST + P+GGVK+SG GREG +Y ++E EIK VC
Sbjct: 413 ND--SSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVCF 453
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 465 bits (1200), Expect = e-161
Identities = 189/470 (40%), Positives = 275/470 (58%), Gaps = 15/470 (3%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G W+ +T++V NPAT EVI V + A+++A AF +WS + ER+
Sbjct: 3 IDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAA 62
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRV-YGEIIP 176
L + + A +EL Q ITLE G P+ A +V G + A+ K + E
Sbjct: 63 LLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEERRG 122
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+L V+++P+GV G ITPWN+PL I KV PALA GCTVV+KPSE PL+A+
Sbjct: 123 NSL------VVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIIL 176
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
AE+ +AG+P GV N+V G+ P +G+AL P V ++FTGST GK++ AA TVK
Sbjct: 177 AEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVK-- 234
Query: 297 CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356
RV+LELGG + I+ DDADL AV +AA F NSGQ+C R+LV Y + +
Sbjct: 235 -RVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIA 293
Query: 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT--- 413
+ A + VGD GPL + A ++V+ +++ + +GA+++ GG G+
Sbjct: 294 AAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGY 353
Query: 414 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473
F +PTV ++V +M ++REE+FGPV ++ + E+EAI +ANDT GLA Y+++ + +R
Sbjct: 354 FVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERA 413
Query: 474 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
V+ L G V +N + APFGG KQSG GRE +YG++EFLE+K
Sbjct: 414 RAVARRLRAGQVHINGAAFNPG-APFGGYKQSGNGREWGRYGLEEFLEVK 462
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 459 bits (1183), Expect = e-158
Identities = 194/455 (42%), Positives = 284/455 (62%), Gaps = 7/455 (1%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
+ NPA G V A V+ ++ + AI++A+DAF +W+ T +ER + L K +++
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRA 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV 191
++L L+ E G +A E + + + A E +RV GE +P+ P +++P+
Sbjct: 61 DDLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPL 120
Query: 192 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251
GV ITP+N+PL + T+KV ALA G TVV+KPSE TP+ L AE+ +AG+P GV N
Sbjct: 121 GVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFN 180
Query: 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311
VV G ++GD L+ P+VR +TFTGSTAVG+++ A +KK+ LELGG P IV
Sbjct: 181 VVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKIT---LELGGKNPLIV 237
Query: 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371
DADL+ AV A F + GQ C+ A+R++V+E +Y++F F LKVGD
Sbjct: 238 LADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDP 297
Query: 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 431
V GPLI+ +E+++ VEDAV+KGAK+L GG+ FY+PTVL++V +M + R
Sbjct: 298 DTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIFR 354
Query: 432 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491
EE FGPV ++ K EEA+ +ANDT GL+A I TN+LQR ++++E LE G+V +N+
Sbjct: 355 EETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPT 414
Query: 492 ISTE-VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
I E PFGGVK SG GREG ++ M+EF E+K++
Sbjct: 415 ILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 453 bits (1169), Expect = e-157
Identities = 186/433 (42%), Positives = 265/433 (61%), Gaps = 8/433 (1%)
Query: 95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 154
A ++A A +W+ ER+ LRK ++L ++E+ + E G +A EV
Sbjct: 3 DRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVG 62
Query: 155 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214
+ A +R GEI+P+ +P + V + P+GV G I+P+NFPL + R V PA
Sbjct: 63 AAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPA 122
Query: 215 LACGCTVVVKPSEFTPLT-ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 273
LA G VV+KP TP+T L AE+ +AG+P GV+NVV G +IGDAL+ P+VR I
Sbjct: 123 LALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMI 182
Query: 274 TFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 333
+FTGSTAVG+ + A +KKV +LELGGN P IV DDADL++AV+ A F + G
Sbjct: 183 SFTGSTAVGRHIGELAGRHLKKV---ALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQG 239
Query: 334 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393
Q C+ A R+LV E +Y++F + K L VGD V GPLIN+ +++V VED
Sbjct: 240 QICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVED 299
Query: 394 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 453
AV+ GA++L GG L FY+PTVLS+V +M + REE+FGPVAP++ F +EEA+ +
Sbjct: 300 AVAAGARLLTGGTYEGL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVEL 356
Query: 454 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLGREGS 512
ANDT GL+A +FT +L+R +E LE G+V +N+ ++ E PFGGVK SG GR G
Sbjct: 357 ANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGG 416
Query: 513 KYGMDEFLEIKYV 525
++EF E +++
Sbjct: 417 PASLEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 450 bits (1161), Expect = e-155
Identities = 199/464 (42%), Positives = 283/464 (60%), Gaps = 15/464 (3%)
Query: 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDL 126
G+T NPATG V+A V+ + A+++A AF S WS+L+ AER L + DL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 127 LMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF 185
+ AH++EL L TL+ GKP+ +A+ +V A +YAE +VYGE+ P T PD
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAP-TGPDALAL 119
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 245
+ ++P+GV GA+ PWNFPL M K+ PALA G +VV+KP+E +PLTAL AELAL+AG+
Sbjct: 120 ITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGL 179
Query: 246 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGG 305
P GV+NVV G G+AL V + FTGST VG++ + + + K RV LE GG
Sbjct: 180 PAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLK--RVWLECGG 237
Query: 306 NAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 364
+P IVF DA DL+ A A A F N G+ C +R+LV E I ++F + A + K
Sbjct: 238 KSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWK 297
Query: 365 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSN 422
GD G L+++A +KV ++E ++GA+++ GG+R G F EPTV
Sbjct: 298 PGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDG 357
Query: 423 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 482
V +M ++REE+FGPV ++ F +EEEA+ +AND+ GLAA ++T++L R RV+ L
Sbjct: 358 VTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRA 417
Query: 483 GLVGVN---EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
G V VN EG I+T PFGG KQSG GR+ S + +D++ E+K
Sbjct: 418 GTVWVNCFDEGDITT---PFGGFKQSGNGRDKSLHALDKYTELK 458
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 445 bits (1147), Expect = e-153
Identities = 191/475 (40%), Positives = 278/475 (58%), Gaps = 7/475 (1%)
Query: 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 112
++T+ LI G+ + +G+ V+NPATGEV+A ++ + A+++A AF WS+ T
Sbjct: 1 MQTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTT 59
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVY 171
ER++ L K D + + +E +L +L GKPL A+ E+ F+A A+ +
Sbjct: 60 PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+ L + + PVGV +I PWN+PL M K+ PALA G TVV+KPSE TPL
Sbjct: 120 GKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPL 179
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
TAL AELA +PPGV+NVV G +GDAL+ P+VR ++ TGS A GK +++ AA
Sbjct: 180 TALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238
Query: 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
+VK R LELGG AP IVFDDADL+ V G + N+GQ C A R+ Q GIY+
Sbjct: 239 SVK---RTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDD 295
Query: 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSL 410
+ AV LKVGD E GPLI+ A ++V FVE A + G +V+ GG
Sbjct: 296 LVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDG 355
Query: 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470
+YEPT+L+ + + + + EVFGPV + F E++A+ AND++ GLA+ ++T ++
Sbjct: 356 KGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDV 415
Query: 471 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
R RVS L+YG VN + P GG KQSG G++ S YG++++ +++V
Sbjct: 416 GRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 443 bits (1140), Expect = e-152
Identities = 202/473 (42%), Positives = 291/473 (61%), Gaps = 10/473 (2%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NSWSKLTAAERS 117
I +++ + DG+T++ NP+TGEVIA+V G ++ A+ +A AF + WSK+T ER
Sbjct: 12 INNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERG 71
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L K DL+ +++ L + L+ GKP A+G++D I +YA A ++ G+ IP
Sbjct: 72 ELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIP 131
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ P++ + L +P GV G I PWN+PLAM K+ PALA G TVV+KP+E TPL+ L
Sbjct: 132 TS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYF 190
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
A L +AG PPGVVN++ G G AL P V KI FTGSTA G+ +M AA +K
Sbjct: 191 ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKA- 249
Query: 297 CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356
V+LE GG +P +VF+DADL+ AV A A NSGQ C +R+ VQE IY+KF + F
Sbjct: 250 --VTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKF 307
Query: 357 SKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-- 413
+ VK N KVG F + V GP ++K ++V +++E +GAK++ GG + G+
Sbjct: 308 VEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKG 367
Query: 414 -FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472
F PT+ ++V +M + +EE+FGPV + FKT EEAI ANDT GLAA +FT +++R
Sbjct: 368 YFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRR 427
Query: 473 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
RV+ LE G+V +N S PFGG K SG+GRE +YG++ + + K V
Sbjct: 428 AHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 441 bits (1136), Expect = e-151
Identities = 203/458 (44%), Positives = 282/458 (61%), Gaps = 10/458 (2%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPAT I + ++ A+ +A AF W K T AER+K LR + + +EE
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREE 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV---YGEIIPATLPDRRLFVLKQP 190
L +L + GKPL EA +VD A E+YA+ A+++ +P D + V ++P
Sbjct: 61 LAELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREP 120
Query: 191 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVV 250
VGV G ITPWNFPL M KV PALA GCTVV+KPSE T LT L AE+A +AG+PPGV+
Sbjct: 121 VGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVL 180
Query: 251 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI 310
NVV G + G L P + KI+FTGSTA G ++M AA +K VSLELGG +P I
Sbjct: 181 NVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIK---PVSLELGGKSPII 237
Query: 311 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370
VFDDADL AV A+ F N+GQ C +R+LV E I + F + + A + ++VGD
Sbjct: 238 VFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLE 297
Query: 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT--FYEPTVLSNVKSEML 428
EGV GPL+++A EKV +F+ +GA++L GGRR + F PTV ++V ++
Sbjct: 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSR 357
Query: 429 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN 488
+ REE+FGPV + F TE+EAI +AND+ GLAA + + + +R RV+EALE G+V +N
Sbjct: 358 IWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWIN 417
Query: 489 -EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ AP+GG K+SG+GRE ++G+D +LE+K +
Sbjct: 418 CSQPCFPQ-APWGGYKRSGIGRELGEWGLDNYLEVKQI 454
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 441 bits (1137), Expect = e-151
Identities = 191/474 (40%), Positives = 285/474 (60%), Gaps = 10/474 (2%)
Query: 57 GLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 115
I G+W+ DG+ E NP+ T +V+ + ++ AI++A AF +W + +
Sbjct: 3 NYIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEA 60
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 175
R+ L K D L A KEEL +L+T E+GK L EA GEV + +YA EA R+ GE +
Sbjct: 61 RADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETL 120
Query: 176 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 235
P+T P + ++P+GV G ITPWNFP+A+ K+ PALA G TVV KP+E TP +A A
Sbjct: 121 PSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWA 180
Query: 236 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295
E+ +AG+P GV N+VMG+ ++G AL+ P V ++FTGSTAVG+++ A AA
Sbjct: 181 LVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGA- 239
Query: 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 355
RV LE+GG P +V DDADL++AV A+ F ++GQ C ++R++V EGI+++F +A
Sbjct: 240 --RVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA 297
Query: 356 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-- 413
+ K LKVGD EGV GP++++ LEK ++E A S+GAK++ GG R
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGY 357
Query: 414 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473
+ P + + V ++M ++REE+FGPVA ++ + +EA+ +ANDT GL+A I T +L+
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHA 417
Query: 474 WRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLG-REGSKYGMDEFLEIKYV 525
+E G+V VN + PFGG K S G RE + ++ + IK V
Sbjct: 418 THFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 437 bits (1127), Expect = e-150
Identities = 206/478 (43%), Positives = 274/478 (57%), Gaps = 13/478 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAF---NSWSK 110
T+ I +W D+ GKT NPATGE I V G K D A+ +A AF + W
Sbjct: 7 TKIFINNEWHDSVSGKTFPTINPATGEKICEVQE-GDKADVDKAVKAARAAFKLGSPWRT 65
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ER + L K DL+ + L L TL+ GKP K + ++ K + +YA A +
Sbjct: 66 MDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADK 125
Query: 170 VYGEIIPATLPDRRLFVL--KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
++G+ IP D F +PVGV G I PWNFPL M K+ PALACG TVV+KP+E
Sbjct: 126 IHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAE 182
Query: 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
TPLTAL A L +AG PPGVVNVV G P G A+ + P + K+ FTGST VGK +
Sbjct: 183 QTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242
Query: 288 GAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 347
A + K RV+LELGG +P IVF DADL+ AV A A F N GQ C +R VQE
Sbjct: 243 AAGKSNLK--RVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQES 300
Query: 348 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 407
IY++F + K VG+ F QGP I++ +K+ +E +GAK+ GG+R
Sbjct: 301 IYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKR 360
Query: 408 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467
H F +PTV S+V +M +++EE+FGPV + FKT +E I AN+T GLAA +FT
Sbjct: 361 HGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFT 420
Query: 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
++ + S AL G V VN + + APFGG K SG GRE +YG+ E+ E+K V
Sbjct: 421 KDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTV 478
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 434 bits (1117), Expect = e-149
Identities = 203/454 (44%), Positives = 285/454 (62%), Gaps = 7/454 (1%)
Query: 76 NPATGEVIANVSCMGGKETKD-AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
NPATGE+IA V+ E D A+++A AF +WS + AER + L + +L++A+ +EL
Sbjct: 3 NPATGELIARVA-QASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADEL 61
Query: 135 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
+L +L+ GKP++ A +V A +YA A ++ GE+IP + +++PVGV
Sbjct: 62 ARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGV 120
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
GAI PWNFPL KV PALA G TVV+KP+E TPL+AL AEL +AG P GV+NVV
Sbjct: 121 VGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVV 180
Query: 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313
G G AL+ P V KITFTGSTAVG+K+M GAAG +K RVSLELGG + IVF
Sbjct: 181 TGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLK---RVSLELGGKSANIVFA 237
Query: 314 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373
DADL+ AV A F N GQ C +R+LV E IY++F + F+ ++L+ GD
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297
Query: 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 433
GPL+++A ++V +V+ +GA++L GG+R F EPT+ + V EM +++EE
Sbjct: 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEE 357
Query: 434 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 493
+FGPV ++ F+ EEEA+ +AN T GLAA ++T +L R RV+ AL+ G V +N
Sbjct: 358 IFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRF 417
Query: 494 TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
+PFGG KQSG GRE + +DE+ E+K V +
Sbjct: 418 DPGSPFGGYKQSGFGREMGREALDEYTEVKSVWV 451
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 428 bits (1104), Expect = e-148
Identities = 189/429 (44%), Positives = 249/429 (58%), Gaps = 64/429 (14%)
Query: 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159
+A AF +W+ L AER+ LRK DLL +EEL L TLE GKP++EA+GEV
Sbjct: 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDT 61
Query: 160 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 219
+ A A ++ G +P+ P +V ++P+GV G ITPWNFPL + K+ PALA G
Sbjct: 62 FRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGN 121
Query: 220 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 279
TVV+KPSE TPLTALA AEL +AG+PPGVVNVV G ++G ALL+ P+V KI+FTGST
Sbjct: 122 TVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGST 181
Query: 280 AVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA 339
AVGK +M AA +K V+LELGG +P IV +DADL+ AV GA+ F N+GQ C A
Sbjct: 182 AVGKAIMKAAAENLK---PVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAA 238
Query: 340 NRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 399
+R+LV E IY++F +EK+ T + D
Sbjct: 239 SRLLVHESIYDEF-------------------------------VEKLVTVLVD------ 261
Query: 400 KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA 459
V +M +++EE+FGPV P++ FK EEEAI +ANDT
Sbjct: 262 -----------------------VDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEY 298
Query: 460 GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDE 518
GL A +FT +L R RV+E L G V +N+ I APFGGVK SG+GREG YG++E
Sbjct: 299 GLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEE 358
Query: 519 FLEIKYVCL 527
+ K V +
Sbjct: 359 YTRTKTVVI 367
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 432 bits (1113), Expect = e-148
Identities = 205/475 (43%), Positives = 290/475 (61%), Gaps = 10/475 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFNSWSKLTAAER 116
IGG+W+D+ G+T + NPA E + + D A+ +A +AF W K+ A R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
++ L + +LL KEEL +L+T E GKPL E G+V ++ A E +R++GE +P
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVP 121
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ LP++ +QP+GV ITPWNFP+A+ + K+ PAL CG TVV KP+E TP AL
Sbjct: 122 SELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKL 181
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
EL +AG+PPGVVNVV G ++G+AL+ P V ++FTGST VG+++ A K
Sbjct: 182 VELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNK-- 239
Query: 297 CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356
RV+LE+GG P IV DDADL++A+ GAL + F +GQ C +R++V E +Y++F F
Sbjct: 240 -RVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRF 298
Query: 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT--- 413
+ K L+VGDG E GPLIN+A LEKV + E +GA +LLGG R + G
Sbjct: 299 VERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKG 358
Query: 414 -FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472
F EPTV ++V +M +++EE+FGPV L+ + EEAI +ANDT GL++ I+T ++ +
Sbjct: 359 YFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNK 418
Query: 473 TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLG-REGSKYGMDEFLEIKYV 525
+R LE G+ VN I EV PFGGVK+SG G RE +D F E K V
Sbjct: 419 AFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 431 bits (1111), Expect = e-148
Identities = 198/460 (43%), Positives = 269/460 (58%), Gaps = 14/460 (3%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V PATGEV+A V C G ++ A+ SA A WS + ER + LRK DLL +E
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDE 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP-DRRLFVLKQPVG 192
+ +L T++ GKP++EA ++D A +E+YA A + GE +P LP + ++P+G
Sbjct: 61 IARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVP--LPGGSFAYTRREPLG 118
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V I WN+P+ + + K PALACG +V KPS FTPLTAL AE+ +AG+P GV NV
Sbjct: 119 VCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNV 178
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
V G + G L P V K++FTGS GKK+M+ AA +K V+LELGG +P I+F
Sbjct: 179 VQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIK---HVTLELGGKSPLIIF 234
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
DDADL AVNGA+ A F + GQ C RV VQ I ++F + + K +++GD E
Sbjct: 235 DDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDED 294
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-----GMTFYEPTVLSNVKSEM 427
G LI++ LEKV ++E A +GAKVL GG R + P VL++ +M
Sbjct: 295 TQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDM 354
Query: 428 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 487
+ REE+FGPV +L F TEEE I ANDT GLAA +FT +LQR RV L+ G +
Sbjct: 355 TIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWI 414
Query: 488 NE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526
N + EV PFGG KQSG GRE ++ + ++K V
Sbjct: 415 NTYNISPVEV-PFGGYKQSGFGRENGTAALEHYTQLKTVY 453
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 430 bits (1109), Expect = e-147
Identities = 185/472 (39%), Positives = 278/472 (58%), Gaps = 10/472 (2%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAER 116
IGG+W+ +T++V +PAT EV+ V + A+++A AF++ W +L+ AER
Sbjct: 3 IGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAER 62
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEII 175
+ LR+ D L A +EL +L T E G P+ + + A + +YA A+ E
Sbjct: 63 AAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEER 122
Query: 176 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 235
+ V ++PVGV AI PWN PL + K+ PALA GCTVV+KPS TPL A
Sbjct: 123 RPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYL 182
Query: 236 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295
AE A +AG+PPGVVNVV + ++G+ L+ P V K++FTGSTA G+++ A +
Sbjct: 183 LAEAAEEAGLPPGVVNVVPADR-EVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLA- 240
Query: 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 355
RV+LELGG + IV DDADL+ AV G + A N+GQ CV R+LV Y++ +A
Sbjct: 241 --RVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEA 298
Query: 356 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMT 413
+ AV LKVGD GPL + E+VE ++ ++GA+++ GG R
Sbjct: 299 LAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGW 358
Query: 414 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473
F EPT+ ++V ++M +++EE+FGPV ++ + E++A+ +AND++ GL+ ++T +++R
Sbjct: 359 FVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERG 418
Query: 474 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
V+ + G VGVN G APFGG KQSG+GREG G+D +LE K +
Sbjct: 419 LAVARRIRTGTVGVN-GFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSI 469
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 425 bits (1094), Expect = e-145
Identities = 199/453 (43%), Positives = 263/453 (58%), Gaps = 6/453 (1%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V +PATGE IA V + A+++A AF SW + T AERSK L K D + + EE
Sbjct: 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEE 60
Query: 134 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
L L + GKPL E+ F+A A+ + G LP + ++P+G
Sbjct: 61 LAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIG 120
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V I PWN+PL M K+ PALA G TVV+KPSE TPLT L AELA +PPGVVNV
Sbjct: 121 VVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELA-AEVLPPGVVNV 179
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
V G GDAL+ P+VR ++ TGS GKK+ AA T+K RV LELGG AP IVF
Sbjct: 180 VCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLK---RVHLELGGKAPVIVF 236
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
DDADL+ AV G A + N+GQ C A RV V E +Y++F A +AV ++VGD E
Sbjct: 237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDED 296
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 432
GPL + A E+V FVE A A+VL GGRR FYEPTV++ V + + +E
Sbjct: 297 TEMGPLNSAAQRERVAGFVERA-PAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQE 355
Query: 433 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 492
E+FGPV + F E+EAI +AND GLA+ ++T ++ R R+S L++G V VN +
Sbjct: 356 EIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIP 415
Query: 493 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
P GG KQSG G++ S Y ++++ IK+V
Sbjct: 416 LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHV 448
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 424 bits (1092), Expect = e-145
Identities = 199/461 (43%), Positives = 278/461 (60%), Gaps = 13/461 (2%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
L+VHNP GEVI V + ++A+++A + L ER L + DLL
Sbjct: 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRA 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 187
EE ++I E GKP+K+A EVD + AEEA+R+ GE IP +R + +
Sbjct: 61 EEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTI 120
Query: 188 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 247
++PVGV AITP+NFPL ++ K+ PA+A GC VV+KP+ TPL+AL A++ ++AG+P
Sbjct: 121 REPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPE 180
Query: 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307
GV+ VV G +GDA +V ++FTGS AVG+ L A A G R++LELGGNA
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGK-----RIALELGGNA 235
Query: 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367
P IV DADL+ A+ F ++GQ C+ R+ V E +Y++F +AF AVK LKVGD
Sbjct: 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGD 295
Query: 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM 427
E GPLI++ A E+VE +VE+AV GA++L GG R ++PTVL +V +
Sbjct: 296 PLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDG---ALFKPTVLEDVPRDT 352
Query: 428 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 487
+S EE FGPV P++ + EEAI +AN T+ GL A IFT +L ++ +E LE G V V
Sbjct: 353 KLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMV 412
Query: 488 NEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
N+ T+ PFGGVK+SG+GREG Y M+E E K V +
Sbjct: 413 NDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 423 bits (1091), Expect = e-144
Identities = 186/459 (40%), Positives = 273/459 (59%), Gaps = 13/459 (2%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKE 132
V NPAT EVI G + AI++A AF++ A ER++ LR+ ++ L A KE
Sbjct: 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKE 60
Query: 133 ELGQLITLEQGKPLK-EAVGEVDYGAKFIEFYAEEAKRVYGEII-----PATLPDRRLFV 186
EL L+ E G P+ +VD + ++A+ A E P RR+ V
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRV-V 119
Query: 187 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 246
++PVGV AITPWNFP + K+ PALA G TVV+KP+ TPL+AL E+ + +P
Sbjct: 120 RREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLP 179
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGN 306
GVVNVV G+ +G+AL T P+V ++FTGSTAVG+++MA AA T+K+V LELGG
Sbjct: 180 AGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVL---LELGGK 236
Query: 307 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366
+ IV DDADL A A+ N+GQ C R+LV Y++ +A + A + L VG
Sbjct: 237 SANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVG 296
Query: 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR-HSLGMTFY-EPTVLSNVK 424
D G V GPLI+ A ++VE ++ +GA+++ GG R L FY EPT+ ++V
Sbjct: 297 DPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVD 356
Query: 425 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 484
++M +++EE+FGPV ++ + ++EA+ +AND++ GL+ +++ ++ R +RV+ + G
Sbjct: 357 NDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGS 416
Query: 485 VGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
VG+N G APFGG KQSGLGRE G++EFLE K
Sbjct: 417 VGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETK 455
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 423 bits (1089), Expect = e-144
Identities = 181/463 (39%), Positives = 267/463 (57%), Gaps = 14/463 (3%)
Query: 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
G+IGG+W+ + G+T NPA GE IA V ++ + A+++A +AF W K+ A R
Sbjct: 1 GVIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRR 59
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
+ +R+ + L KE LG+L++LE GK L E +GEV ++ ++ +YG IP
Sbjct: 60 GEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIP 119
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ P RL P+GV G IT +NFP+A+ AL CG TVV KPSE TPLTA+A
Sbjct: 120 SERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAV 179
Query: 237 AELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
++ + G+PPGVVN+V G D G+ L+ P+V ++FTGST VG+++ A
Sbjct: 180 TKILAEVLEKNGLPPGVVNLVTGGG-DGGELLVHDPRVPLVSFTGSTEVGRRVGETVARR 238
Query: 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 352
+V LELGGN IV DDADL++AV L A +GQ C R++V E +Y++F
Sbjct: 239 FGRVL---LELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF 295
Query: 353 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSL 410
+ KA K +++GD EG + GPLIN+AA+EK +E A S+G VL GG+R
Sbjct: 296 LERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGE 355
Query: 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470
+ EPT+++ V + + +EE F P+ ++ F + EEAI + ND GL++ IFT +L
Sbjct: 356 PGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDL 415
Query: 471 QR--TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 510
+ W + + G+V VN E+ FGG K++G GRE
Sbjct: 416 REAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRE 458
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 422 bits (1086), Expect = e-144
Identities = 200/474 (42%), Positives = 289/474 (60%), Gaps = 6/474 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLT 112
T+ I G+++DA GKT +P GEVIA+V+ ++ A+ +A AF+ W ++T
Sbjct: 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMT 63
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVY 171
ERS+ L ++ DLL H +EL L T + GKP ++A EV A+ +YA A +++
Sbjct: 64 GYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIH 123
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G +PA P ++ L +P+GV G I PWNFPL M KVGPALACG T+V+KP+E TPL
Sbjct: 124 GMTLPADGP-HHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPL 182
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
+AL AA+LA +AG+P GV+N+V G P G A+ + V K+ FTGST VGK +M AA
Sbjct: 183 SALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK 242
Query: 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
+ K V+LELGG +P IV +DAD++ AV A A F N GQ C +R V E IY++
Sbjct: 243 SNLK--PVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300
Query: 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411
F + VGD F +GV QGP ++K EK+ +++E +GA ++ GG R
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSK 360
Query: 412 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471
+ +PT+ S+VK +M ++R+E+FGPV +L FKT +E I AN++ GLAA +F+ N+
Sbjct: 361 GYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNID 420
Query: 472 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+S AL+ G V VN + PFGG K SG+GRE Y ++ +L++K V
Sbjct: 421 TANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAV 474
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 418 bits (1076), Expect = e-142
Identities = 200/470 (42%), Positives = 282/470 (60%), Gaps = 9/470 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G++++ G T E+ NPA GEVIA V ++ + AI++A A W+ ++ ER +
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERGR 61
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ DL+ EEL +L TL+ GK L+E V ++D GA EF+A A + GEIIP
Sbjct: 62 ILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIPL 121
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
P + +++P+GV I WN+PL + + K+ PALA G +V KPSE TPLTAL A
Sbjct: 122 GGPSF-AYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVA 180
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVC 297
E+ +AG+P GV NVV G+ ++G L+ P V K++FTG GKK+MA AAG +K
Sbjct: 181 EIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKH-- 238
Query: 298 RVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 357
V++ELGG +P IVFDDADL AV+GA+ F ++GQ C RV V + I E+F
Sbjct: 239 -VTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLV 297
Query: 358 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGM-T 413
+ + +K+GD F E GPLI+ A +KV +++E ++GA + GG R L
Sbjct: 298 ERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGF 357
Query: 414 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473
F EPTV ++ +M + REE+FGPV +L F E+E I ANDT GLA +FT +L R
Sbjct: 358 FVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRA 417
Query: 474 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
RV++ LE G V +N + APFGG KQSG+GRE K + + E+K
Sbjct: 418 HRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 416 bits (1072), Expect = e-142
Identities = 186/454 (40%), Positives = 276/454 (60%), Gaps = 6/454 (1%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE 132
+PA G V+A + ++ A+++A AF+ W +++ AER+ L K DL+ A +E
Sbjct: 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRE 61
Query: 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
L + TLE GKP+ +A GE++ A + A A+ ++G+ D VL++P+G
Sbjct: 62 RLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIG 121
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V G ITPWNFP ++++K+ ALA GCTVVVKPSEFT T L AEL ++AG+P GVVN+
Sbjct: 122 VVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNI 181
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
V G +G A+ P V ++FTGST VGK + A AA +KK VSLELGG P IVF
Sbjct: 182 VTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKK---VSLELGGKNPQIVF 238
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
DADL+ A + + + N+G+ C +R+LV E I + F A + ++VGD
Sbjct: 239 ADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPE 298
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSR 431
G +IN+A L K+ +V+ ++GA +LLGG R + FY+PT+ ++V +M ++R
Sbjct: 299 TKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAR 358
Query: 432 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491
EE+FGPV +L F T +EAI +ANDT GL+A +++ ++ V+ + G V VN L
Sbjct: 359 EEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFL 418
Query: 492 ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ PFGG KQSG+GRE +YG++E+ E+K V
Sbjct: 419 DGSPELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 414 bits (1066), Expect = e-141
Identities = 188/460 (40%), Positives = 270/460 (58%), Gaps = 16/460 (3%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKE 132
V +P+TGEV A ++ G + A+ +A AF S W +L+ AER + L + L+ H +
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
EL +L +L+ GKPL +A +V+ A++ E+Y A +++GE IP P ++ +++P G
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIPL-GPGYFVYTVREPHG 119
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V G I PWN+PL + R V PALA G VVVKP+E PLTAL AELA +AG+P G +NV
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
V G + G AL+ P V I+FTGS G +M AA + V V+LELGG +P IVF
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA---ENVVPVTLELGGKSPQIVF 236
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
DADL A+ + A +N+GQTC +R+LV IY++ + + + L+VG G E
Sbjct: 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPG-LED 295
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLV 429
GPLI+ L++VE FV A ++GA+++ GGR G F PT+L +V + +
Sbjct: 296 PDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRL 355
Query: 430 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 489
++EE+FGPV ++ F E EAI +AN T+ GL A ++T + R RV+ L G V VN
Sbjct: 356 AQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNN 415
Query: 490 ----GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
G I PFGGVK+SG GRE + + + K V
Sbjct: 416 YGAGGGIEL---PFGGVKKSGHGREKGLEALYNYTQTKTV 452
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 415 bits (1068), Expect = e-140
Identities = 209/482 (43%), Positives = 294/482 (60%), Gaps = 13/482 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SW 108
R Q IGG+W + GK + V NPAT E I ++ ++ A+ +A AF W
Sbjct: 7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDW 66
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
++ T A R+K LR + K EL +L TL+ GKPL EA ++D A E+YA+ A+
Sbjct: 67 ARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAE 126
Query: 169 RVYG-EIIPATLPDR--RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
+ + P +LP + +VLK+P+GV G ITPWN+PL M T KV PALA GCT V+KP
Sbjct: 127 ALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKP 186
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
SE +T L A++ + G+PPGV+NVV G + G L + P V KI FTGSTA G+K+
Sbjct: 187 SELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
M AA VK VSLELGG +P IVFDD DL+ AV A+ F +GQ C +R+LV
Sbjct: 247 MTAAAQMVKP---VSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVH 303
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
E I +F + K KN+K+ D EG GP++++ EKV F+ A S+GA +L GG
Sbjct: 304 ERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGG 363
Query: 406 RR-HSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 463
+R L F+ EPT++++V + M + REEVFGPV + F TE+EAI +AND++ GLA
Sbjct: 364 KRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAG 423
Query: 464 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
+ +N+L+R RVSEA + G+V +N AP+GG+K+SG GRE ++G++ +L +K
Sbjct: 424 AVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVK 483
Query: 524 YV 525
V
Sbjct: 484 QV 485
|
Length = 503 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 412 bits (1061), Expect = e-140
Identities = 192/478 (40%), Positives = 280/478 (58%), Gaps = 13/478 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I G+++ + G+T E +PAT EV+ +V+ G + A +A +AF W++L AAER
Sbjct: 4 FIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERK 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK-RVYGEIIP 176
+ L K DL+ H +E+ L L+ G+PL++ +V A+ F+A++ + + G P
Sbjct: 64 RYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYP 123
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ ++ PVG G ITPWN P + T K+ PALA G TVV+KP+E++PLTA
Sbjct: 124 V--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARL 181
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
AE+A +AG+P GV N+V G + G AL+ P V+ ++FTG TA G +M A T+K
Sbjct: 182 AEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLK-- 239
Query: 297 CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356
R S+ELGG +P IVFDDADL A++ + F +G+ C ++R+LVQE I E F +
Sbjct: 240 -RFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKL 298
Query: 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL------ 410
+ V+ ++VG GPLI+ L KV +VE A +GA +L+GG R
Sbjct: 299 VERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDL 358
Query: 411 -GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 469
+ PTV + + M +++EE+FGPV ++ FK EEEAI ANDT GLA Y++TN+
Sbjct: 359 GRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTND 418
Query: 470 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
+ R RV+ ALE G++ VN + PFGGVK SG+GREG Y D + E K V L
Sbjct: 419 VGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL 476
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 410 bits (1055), Expect = e-139
Identities = 194/463 (41%), Positives = 268/463 (57%), Gaps = 19/463 (4%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAAERSKGLRKWYDLLMAH 130
LEV NP TGEV+ V T++A+ A A + S LT +RS L K LL A
Sbjct: 1 LEVRNPYTGEVVGTVP----AGTEEALREALALAASYRSTLTRYQRSAILNKAAALLEAR 56
Query: 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFV 186
+EE +LITLE G LK+ EV A + F A EA R GE A R++F
Sbjct: 57 REEFARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFT 116
Query: 187 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 246
L++P+GV AITP+N PL + K+ PA+A +V+KPSE TPL+A+ A+L +AG+P
Sbjct: 117 LREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLP 176
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGN 306
P +++VV G +IGD L+T P V +TFTG AVGK + A AG +++ LELGGN
Sbjct: 177 PDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI-AATAGYKRQL----LELGGN 231
Query: 307 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366
P IV DDADL A A+A + NSGQ C R+LV E + ++F D + L VG
Sbjct: 232 DPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVG 291
Query: 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE 426
D G +I++ A ++E VE+A+++GA+VLLG +R Y PTVL +V +
Sbjct: 292 DPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQG---ALYAPTVLDHVPPD 348
Query: 427 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 486
+ EE FGPVAP++ K +EAI ++N T GL++ + TN+L R+ E L+ G V
Sbjct: 349 AELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVN 408
Query: 487 VNEGL-ISTEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 527
VNE +E++PFGGVK SGLG +EG + M E +K L
Sbjct: 409 VNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL 451
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 411 bits (1058), Expect = e-139
Identities = 195/482 (40%), Positives = 276/482 (57%), Gaps = 20/482 (4%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G +++A G+T EV NPATGEV+A V + + A++SA W+ +TA ERS+
Sbjct: 11 IDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSR 70
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ D+L +EL L TL+ GKP++E V ++ GA +E+YA A + GE IP
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPL 130
Query: 178 TLPD----RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233
RR +P+GV I WN+P+ + K PALA G ++ KPSE TPLTA
Sbjct: 131 RGGSFVYTRR-----EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
L AE+ +AG+P GV NVV G+ +G L P + K++FTG GKK+MA AA ++
Sbjct: 186 LKLAEIYTEAGLPDGVFNVVQGDG-RVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASL 244
Query: 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 353
K V++ELGG +P IVFDDADL+ A + A+ A F +SGQ C RV VQ+ I F
Sbjct: 245 K---EVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFE 301
Query: 354 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM- 412
+ V+ +++GD GPL++ A +KV ++E ++GA++L GG R + G
Sbjct: 302 ARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGF 361
Query: 413 ---TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 469
F PTV ++ +M + REE+FGPV +L F E+E I ANDT GLAA +FT +
Sbjct: 362 ANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTAD 421
Query: 470 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK--YVCL 527
L R RV LE G+ +N S P GG KQSG+GRE ++ + +IK V +
Sbjct: 422 LSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM 481
Query: 528 GD 529
G
Sbjct: 482 GP 483
|
Length = 488 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 408 bits (1051), Expect = e-138
Identities = 197/471 (41%), Positives = 287/471 (60%), Gaps = 8/471 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWS-KLTAAER 116
I G+++D+ G T++V+NP+TG++I ++ + A+ A AF W K++ ++R
Sbjct: 11 INGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKR 70
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEII 175
+ L K DL+ + + L + L+ GK A +V A +Y A +++G++I
Sbjct: 71 GRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVI 130
Query: 176 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 235
T + + +P+GV G I PWNFPL M K+ PALA G T+V+KPSE TPL+AL
Sbjct: 131 -ETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALY 189
Query: 236 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295
+L +AG PPGV+NVV G G+A+ + + K+ FTGST VG+K+M AA + K
Sbjct: 190 MTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLK 249
Query: 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 355
+V+LELGG +P IVFDDADL AV F N GQ C +R+ VQEGIY+KF
Sbjct: 250 --KVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKR 307
Query: 356 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 415
F + K LKVGD F E QGP +++ E++ +++E ++GA V GG+RH F
Sbjct: 308 FKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFI 367
Query: 416 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 475
EPT+ ++V +M + +EE+FGPV ++ FKTEEEAI AND+ GLAA +FTNN+ R
Sbjct: 368 EPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIR 427
Query: 476 VSEALEYGLVGVN-EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
V+ AL+ G V VN L+ +V PFGG KQSG+GRE +Y ++ + +IK V
Sbjct: 428 VANALKAGTVWVNCYNLLHHQV-PFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 405 bits (1044), Expect = e-138
Identities = 176/438 (40%), Positives = 249/438 (56%), Gaps = 13/438 (2%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
+ A+ +A AF +WSK +ER L K DLL + ++E + + E G A
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
VD A + A ++ G IP+ P V+K+PVGV I PWN P+ + TR +
Sbjct: 61 VDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIA 120
Query: 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQ 269
LA G TVV+K SE +P T + +AG+P GV+NVV +AP++ +AL+ P
Sbjct: 121 YPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPA 180
Query: 270 VRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKF 329
VRK+ FTGST VG+ + AA +K V LELGG AP IV +DADL+ A N AL F
Sbjct: 181 VRKVNFTGSTRVGRIIAETAAKHLK---PVLLELGGKAPAIVLEDADLDAAANAALFGAF 237
Query: 330 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 389
NSGQ C+ R++V E I ++F + A + L G VV G L++ AA ++V+
Sbjct: 238 LNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLGSLVSAAAADRVKE 292
Query: 390 FVEDAVSKGAKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448
V+DA+SKGAK+++GG S T PT+L NV +M + EE FGPV ++ K EE
Sbjct: 293 LVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEE 352
Query: 449 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGL 507
EA+ +AND+ GL+A +FT +L R V++ +E G V +N + E P GGVK SG
Sbjct: 353 EAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGY 412
Query: 508 GREGSKYGMDEFLEIKYV 525
GR K+G+DEF E K++
Sbjct: 413 GRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 406 bits (1045), Expect = e-138
Identities = 186/459 (40%), Positives = 265/459 (57%), Gaps = 18/459 (3%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
LEV NP TGEV+A V+ G + ++AI++A AF L A R+ L L
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 187
EEL + I LE GKP+K+A GEV AEEA R+YGE++P A R+ V
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVR 120
Query: 188 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 247
+ P+G AITP+NFPL ++ KV PA+A GC V+KP+ TPL+AL E+ + G+P
Sbjct: 121 RFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPK 180
Query: 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307
G +V+ + D D L+T +++ ++FTGS AVG L A A KK +V LELGGNA
Sbjct: 181 GAFSVLPCSRDD-ADLLVTDERIKLLSFTGSPAVGWDLKARAG---KK--KVVLELGGNA 234
Query: 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367
IV DADL+ A + F +GQ+C+ RVLV +Y++F VK LK GD
Sbjct: 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGD 294
Query: 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM 427
+ GP+I+++ E+VE +V +AV GAK+L GG+R EPT+L +V +M
Sbjct: 295 PKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDG---ALLEPTILEDVPPDM 351
Query: 428 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 487
V+ EEVFGPV + + +EA+ ND+ GL A +FT +L++ R + LE G V +
Sbjct: 352 EVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVI 411
Query: 488 NEGLIST---EVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
N+ + T + P+GGVK SG+GREG +Y ++E E +
Sbjct: 412 ND--VPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPR 448
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 401 bits (1032), Expect = e-136
Identities = 183/437 (41%), Positives = 255/437 (58%), Gaps = 19/437 (4%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDY 155
A+ A AF +W K + AER+ LRK DLL K+EL +LITLE GKP+ EA EV+
Sbjct: 3 AALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEK 62
Query: 156 GAKFIEFYAEEAKRVYGEIIPATLPDRRL-------FVLKQPVGVAGAITPWNFPLAMIT 208
A +YAE A A L D + +V +P+GV I PWNFP +
Sbjct: 63 CAWICRYYAENA--------EAFLADEPIETDAGKAYVRYEPLGVVLGIMPWNFPFWQVF 114
Query: 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 268
R P L G TV++K + P ALA EL +AG P GV ++ ++ + +A++ P
Sbjct: 115 RFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQV-EAIIADP 173
Query: 269 QVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAK 328
+VR +T TGS G+ + A A +KK LELGG+ P IV DDADL+ AV A+ +
Sbjct: 174 RVRGVTLTGSERAGRAVAAEAGKNLKKS---VLELGGSDPFIVLDDADLDKAVKTAVKGR 230
Query: 329 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 388
+N+GQ+C+ A R +V E +Y++F + F +A+ LKVGD E GPL K +++
Sbjct: 231 LQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELH 290
Query: 389 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448
VE+AV+ GA +LLGG+R FY PTVL++V M EE+FGPVA ++ K EE
Sbjct: 291 EQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEE 350
Query: 449 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG 508
EAI +AND+ GL +FT +L+R RV+ LE G+V +N + S PFGGVK+SG G
Sbjct: 351 EAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYG 410
Query: 509 REGSKYGMDEFLEIKYV 525
RE ++G+ EF+ IK V
Sbjct: 411 RELGRFGIREFVNIKTV 427
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 400 bits (1029), Expect = e-135
Identities = 178/467 (38%), Positives = 279/467 (59%), Gaps = 8/467 (1%)
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
G+W D +T++V NP TGE +A + ++ +A +A A W+ ER++ L
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
K +L ++E+ + + E G +A E A R+ G I+P+ +P
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAEL 239
+ V ++P+GV G I+PWNFPL + R V PALA G VV+KP+ TP+T L A++
Sbjct: 121 GKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKI 180
Query: 240 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRV 299
+AG+P GV+NVV+G +IGDA + P R I+FTGST VG+ + A +K +V
Sbjct: 181 FEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLK---KV 237
Query: 300 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 359
+LELGGN P +V +DAD++ AVN A+ KF + GQ C+ NR++V E +Y++F + F +
Sbjct: 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVER 297
Query: 360 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTV 419
VK L GD V GPLIN++ ++ + +E AV +GA +L+GG + EPTV
Sbjct: 298 VKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVL---EPTV 354
Query: 420 LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA 479
LS+V ++M ++REE+FGPVAP++ EEEA+ +ANDT GL+ +FT++L+R + +
Sbjct: 355 LSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARR 414
Query: 480 LEYGLVGVNEGLISTE-VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
++ G+ +N+ ++ E PFGG K SGLGR ++ ++EF K++
Sbjct: 415 IDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-134
Identities = 183/456 (40%), Positives = 252/456 (55%), Gaps = 10/456 (2%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
NPATGEV+ V E A++ A A +W+ L R++ L +W L H +EL
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EIIP--ATLPDRRLFVLKQPV 191
+L+ E GKP +A EV + I++ A A RV +P +P+++ V +P
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPY 120
Query: 192 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251
GV G I+PWN+PL + PALA G VV+KPSE TPL AE AG P GV+
Sbjct: 121 GVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQ 180
Query: 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311
VV G+ G AL+ + V K+ FTGS A G+K+MA AA +++ V LELGG P IV
Sbjct: 181 VVTGDGA-TGAALIDAG-VDKVAFTGSVATGRKVMAAAA---ERLIPVVLELGGKDPMIV 235
Query: 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371
DADL A A+ N+GQTC+ RV V E +Y++F + L+ G
Sbjct: 236 LADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIG 295
Query: 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 431
GP+ L+ V V+DAV+KGAK L GG R + G FYEPTVL++V +M V R
Sbjct: 296 DADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMR 355
Query: 432 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491
EE FGPV P++ E+EAI +AND+ GL+A +F+ +L R ++ LE G V +N+ L
Sbjct: 356 EETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVL 415
Query: 492 ISTEV--APFGGVKQSGLGREGSKYGMDEFLEIKYV 525
++ + PFGGVK SG GR G+ EF K +
Sbjct: 416 LTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAI 451
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 397 bits (1022), Expect = e-133
Identities = 208/475 (43%), Positives = 294/475 (61%), Gaps = 8/475 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLT 112
TQ LI G+++DA GKT +P TGEVIA+V+ ++ A+++A AF+ W K+T
Sbjct: 58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMT 117
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVY 171
A ERS+ L ++ DLL H +EL L T + GKP +++ E+ A+ +YA A +++
Sbjct: 118 AYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIH 177
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G +PA P + L +P+GVAG I PWNFPL M KVGPALACG T+V+K +E TPL
Sbjct: 178 GLTVPADGP-HHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 236
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
+AL AA+L +AG+PPGV+NVV G P G AL + V K+ FTGST GK ++ AA
Sbjct: 237 SALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAK 296
Query: 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
+ K V+LELGG +P IV +DAD++ AV A A F N GQ C +R V E +Y++
Sbjct: 297 SNLK--PVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDE 354
Query: 352 FAD-AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 410
F + A ++A+K + VGD F +GV QGP I+ EK+ +++ V GA + GG R
Sbjct: 355 FVEKAKARALKRV-VGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGS 413
Query: 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470
+ +PTV SNV+ +ML++++E+FGPV +L FK +E I AN+T GLAA +FT NL
Sbjct: 414 KGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNL 473
Query: 471 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+S AL G V VN + PFGG K SG+GRE Y ++ +L++K V
Sbjct: 474 DTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAV 528
|
Length = 538 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 393 bits (1010), Expect = e-132
Identities = 201/477 (42%), Positives = 292/477 (61%), Gaps = 12/477 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFN--SWSKL 111
T+ I G+++DA GKT E +P TGEVIA ++ G KE D A+ +A +AF+ W ++
Sbjct: 21 TKLFINGEFVDAASGKTFETRDPRTGEVIARIA-EGDKEDVDLAVKAAREAFDHGPWPRM 79
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGK-PLKEAVGEVDYGAKFIEFYAEEAKRV 170
+ ER + + K+ DL+ H EEL L T++ GK ++ A + +YA A ++
Sbjct: 80 SGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKI 139
Query: 171 YGEIIPATLPDRRL--FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
+GE + + R+L + LK+P+GV G I PWNFP M KV PALA GCT+VVKP+E
Sbjct: 140 HGETLKMS---RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196
Query: 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288
TPL+AL A LA AG+P GV+NVV G P G A+ + V K++FTGST VG+K+M
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256
Query: 289 AAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 348
AA + K +VSLELGG +P ++FDDAD+++AV+ AL F N G+ CV ++RV VQEGI
Sbjct: 257 AATSNLK--QVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGI 314
Query: 349 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 408
Y++F + K+ VGD F QGP ++K EK+ +++E +GA +L GG+
Sbjct: 315 YDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPC 374
Query: 409 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468
+ EPT+ ++V +M ++++E+FGPV L+ FKT EEAI AN+T GLAA I T
Sbjct: 375 GDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTK 434
Query: 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+L VS ++ G + VN PFGG K SG GR+ +D++L++K V
Sbjct: 435 DLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSV 491
|
Length = 501 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 389 bits (1002), Expect = e-131
Identities = 180/458 (39%), Positives = 260/458 (56%), Gaps = 11/458 (2%)
Query: 76 NPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEE 133
+PATGEVI + G E + AI++A AF+ W+ R++ L + D A+ E
Sbjct: 3 DPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAER 61
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L +L+ LE GK L EA E+ + +YA A+ G +I P VL++P+GV
Sbjct: 62 LARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPE-PGSFSLVLREPMGV 120
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE-LALQAGIPPGVVNV 252
AG I PWN P+ ++ R + PALA GCTVVVKP+ T A LA +P GVVN+
Sbjct: 121 AGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNL 180
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
+ + L+ SP V I+FTGSTA G+ +MA AA T+K R+ LELGG PCIVF
Sbjct: 181 FTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLK---RLGLELGGKTPCIVF 237
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
DDADL+ A+ A +GQ C+ +RVLVQ I ++ D + + +KVG G
Sbjct: 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPA 297
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVKSEMLV 429
GPLI++A +++V+ VE A++ GA+V+L G + G+ F PT+L + +
Sbjct: 298 SDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADI 357
Query: 430 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 489
+EE+FGPV L F E EA+ +ANDT+ GLAA ++T +L R RV+ A+ G V +N+
Sbjct: 358 VQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWIND 417
Query: 490 GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
A GG +QSGLGR +++F+E K++ L
Sbjct: 418 WNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 386 bits (994), Expect = e-130
Identities = 185/476 (38%), Positives = 272/476 (57%), Gaps = 11/476 (2%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERS 117
I G+ + K L++ NPAT +VIA+V+ + A++SA+ AF S W+K T AER
Sbjct: 4 IDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERG 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L + DL+ H EEL QL TL GK + + EV A F+ ++A A ++ GE +
Sbjct: 64 RILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLA 123
Query: 177 ATLPDRR-----LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
++P + F ++PVGV I PWNF + + K+G ALA GCT+V+KPSEFTPL
Sbjct: 124 PSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPL 183
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
T L AELA +AGIP GV+NVV G +G L++ P V K++FTGS A GKK+ AA
Sbjct: 184 TLLRVAELAKEAGIPDGVLNVVNGKG-AVGAQLISHPDVAKVSFTGSVATGKKIGRQAAS 242
Query: 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
+ RV+LELGG DAD++ V G L A F + GQ C R V +++
Sbjct: 243 DLT---RVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDE 299
Query: 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411
+A+ + +VG E V+ GPL N+ +KV ++++DA ++G +++ GG +
Sbjct: 300 LVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGE 359
Query: 412 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471
F +PT++ ++ + REE FGPV + ++ EEE I + NDT GL A ++TNNL
Sbjct: 360 GYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLS 419
Query: 472 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
+ R +E G V VN PFGG+KQSG+GRE +D++ E+K V +
Sbjct: 420 KALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMI 475
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 386 bits (994), Expect = e-130
Identities = 180/466 (38%), Positives = 253/466 (54%), Gaps = 20/466 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSK-LTAAER 116
LI G+W ++ GKT+EV++P GEVI +V + E +A +A+DA W + ER
Sbjct: 5 LINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEER 63
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
L K+ DLL +KEE+ L+ E GK LK+A+ EVD +I EE KR+ G+ +P
Sbjct: 64 IDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLP 123
Query: 177 ATLPDRRLFVL----KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232
+ ++P+GV AI P+N+PL + K+ PAL G TVV KP+ L
Sbjct: 124 GDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLL 183
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
+ AE AG P GVVNVV G +IGD L+T ++ I+FTGST VG +L
Sbjct: 184 GIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP-- 241
Query: 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 352
+ R+ LELGG P IV DADL +A + SGQ C RVLV E + ++
Sbjct: 242 ---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADEL 298
Query: 353 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 412
+ + V LKVG + GV PLI+ + + VE ++DAV+KGA VL GG R G
Sbjct: 299 VELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR--EGG 356
Query: 413 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472
PT+L V +M ++ EE FGPV P++ EEAI +AN +N GL A IFT ++ +
Sbjct: 357 NLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINK 416
Query: 473 TWRVSEALEYGLVGVNEGLISTE----VAPFGGVKQSGLGREGSKY 514
++++ALE G V +N + PF G K SG+G +G
Sbjct: 417 ARKLADALEVGTVNINS---KCQRGPDHFPFLGRKDSGIGTQGIGD 459
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 378 bits (972), Expect = e-126
Identities = 185/473 (39%), Positives = 276/473 (58%), Gaps = 14/473 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I G+W+ G+T++ +NPA GE ++ ++ + A+ +A +AF +W K T AER+
Sbjct: 4 FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERA 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIP 176
L K D++ +KE L + TL+ GKP++E ++ A ++A + G
Sbjct: 64 NILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGS--- 120
Query: 177 ATLPDRRLF--VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234
A + D VL++P+GV G I PWNFP M K+ PALA G TVV+KPS T L+ L
Sbjct: 121 ANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL 180
Query: 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
A++ +Q +P GVVN+V G G+ LL P + K+ FTGST VG+ + AA K
Sbjct: 181 ELAKI-IQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA---K 236
Query: 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 354
K+ +LELGG + I+FDDA+ + A+ GA N GQ C +R+ VQEGIY++F
Sbjct: 237 KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVA 296
Query: 355 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT- 413
+ +N+KVG+ G +NK L+K+ ++V+ A +GAK+L GG R +
Sbjct: 297 KLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLD 356
Query: 414 ---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470
F EPT++ NV ++M V++EE+FGPVA ++ FKTE+E I MAND+ GL +FT ++
Sbjct: 357 KGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDI 416
Query: 471 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
R RV+ A+E G V VN APFGG K+SG+GRE K +D + ++K
Sbjct: 417 NRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMK 469
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 378 bits (972), Expect = e-126
Identities = 179/483 (37%), Positives = 264/483 (54%), Gaps = 29/483 (6%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I G+W+ G+ + +NP G+V+ + ++ A+ +A +AF +W K + AER+
Sbjct: 4 FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKE--------AVGEVDYGAKFIEFYAEEAKR 169
L K D + + E L TL+ GKP++E A+ Y A I A+E
Sbjct: 64 NILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIR--AQEGSL 121
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
EI TL + +P+GV G I PWNFPL M K+ PALA G TVV+KP+ T
Sbjct: 122 S--EIDEDTLS----YHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQT 175
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
PL+ L EL + +P GVVNVV G + G L + P++ K+ FTGST VG+ +M A
Sbjct: 176 PLSILVLMEL-IGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYA 234
Query: 290 AGTVKKVCRVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLV 344
A + + V+LELGG +P I FDDA D + N G+ C C +R LV
Sbjct: 235 A---ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALV 291
Query: 345 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404
QE IY++F + + + +KVG+ + G ++K LEK+ ++V+ +GA+VL G
Sbjct: 292 QESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTG 351
Query: 405 GRRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 460
G R +LG FYEPT++ ++M + +EE+FGPV ++ FK EEEAI +ANDT G
Sbjct: 352 GERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYG 411
Query: 461 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 520
L ++T ++ R RV+ ++ G V VN APFGG K+SG+GRE K +D +
Sbjct: 412 LGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQ 471
Query: 521 EIK 523
+ K
Sbjct: 472 QTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 377 bits (971), Expect = e-125
Identities = 188/466 (40%), Positives = 257/466 (55%), Gaps = 21/466 (4%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
R + L +D G T EV P TGE +A V + + A + A A +W+
Sbjct: 18 RLRRLTAR--VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPV 75
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA------ 167
ER+ L +++DL++ ++EEL L+ LE GK + A EV A +YA A
Sbjct: 76 RERAAVLLRFHDLVLENREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAP 135
Query: 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
+R G + T + L+QP GV G I+PWN+PL + PAL G VV+KP
Sbjct: 136 RRRAGALPVLT----KTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDS 191
Query: 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
TPLTALAA EL +AG+P + VV G P +G AL+ + FTGSTA G+ L
Sbjct: 192 QTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALV--DNADYLMFTGSTATGRVLAE 249
Query: 288 GAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 347
A +++ SLELGG P IV DDADL+ A GA+ A F N+GQ C+ R+ V E
Sbjct: 250 QAG---RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHES 306
Query: 348 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR- 406
IY++F AF AV+ +++G G+ G LI++A LE V V+DAV+KGA VL GG+
Sbjct: 307 IYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKA 366
Query: 407 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 466
R LG FYEPTVL+ V +M ++REE FGPV + +EA+ ANDT GL A ++
Sbjct: 367 RPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVW 426
Query: 467 TNNLQRTWRVSEALEYGLVGVNEGLIST---EVAPFGGVKQSGLGR 509
T + R ++ + G V VNEG + AP GG+K SGLGR
Sbjct: 427 TGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGR 472
|
Length = 524 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 372 bits (958), Expect = e-125
Identities = 169/409 (41%), Positives = 247/409 (60%), Gaps = 4/409 (0%)
Query: 120 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL 179
LRK + E+ LI E GK + A EV + A +I++ AE A+R GEII +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 60
Query: 180 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 239
P + + K+ +GV I PWNFP +I RK+ PAL G T+V+KPSEFTP A+A A++
Sbjct: 61 PGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKI 120
Query: 240 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRV 299
+ G+P GV N+V+G +G L +P+V ++ TGS + G+K+MA AA K + +V
Sbjct: 121 VDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAA---KNITKV 177
Query: 300 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 359
LELGG AP IV DDADL++AV + ++ NSGQ C CA RV VQ+GIY++F + +A
Sbjct: 178 CLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEA 237
Query: 360 VKNLKVGDGFGEGVVQ-GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPT 418
++ ++ G+ + GPLIN AALE+VE V AV +GA+V LGG+ +Y PT
Sbjct: 238 MQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPT 297
Query: 419 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 478
+L +V+ EM + EE FGPV P++ F T EEAI MAND++ GL + I+T NL + +
Sbjct: 298 LLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIK 357
Query: 479 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
L++G +N G ++SG+G K+G+ E+L+ + V L
Sbjct: 358 GLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 406
|
Length = 409 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 370 bits (952), Expect = e-124
Identities = 190/460 (41%), Positives = 262/460 (56%), Gaps = 13/460 (2%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPATG+VI V + A+++A AF W+ A ER K L + D L A EE
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEE 60
Query: 134 LGQLITLEQGKPLK-EAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
L +L+ LE G L+ +A E A ++ A + GE +P PD + +++P+G
Sbjct: 61 LARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLG 119
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V GAI PWN PL + K+ PAL G TVV+K +E PL L AE+ L +P GV+NV
Sbjct: 120 VVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEI-LAQVLPAGVLNV 178
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
+ G + G AL+ P V K+TFTGST VGK + AA ++ VSLELGG +P IVF
Sbjct: 179 ITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA---DRLIPVSLELGGKSPMIVF 235
Query: 313 DDADLNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371
DADL+ AV+GA+A +F GQ+C +R+ V E IY+ F + + LK+GD E
Sbjct: 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDE 295
Query: 372 GVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMT----FYEPTVLSNVKSE 426
G +I++ KV +++ +S GA VL GG G F +PT+ S V +E
Sbjct: 296 ATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNE 355
Query: 427 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 486
++REE+FGPV + +K E+E I MAND++ GLAAY++T +L R R + ALE G V
Sbjct: 356 WRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQ 415
Query: 487 VNEGLISTEVAPFGGVKQSGLGREGSKYGM-DEFLEIKYV 525
VN+G +GG KQSGLGRE S GM + F + K V
Sbjct: 416 VNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTV 455
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 365 bits (938), Expect = e-121
Identities = 178/482 (36%), Positives = 278/482 (57%), Gaps = 16/482 (3%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLT 112
Q I G+++DA GKT NP G VI VS ++ A+++A +AF + W K+
Sbjct: 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGK----PLKEAVGEVDYGAKFIEFYAEEAK 168
A +R + + + DL+ H+EEL + +L+ G LK VG + ++A
Sbjct: 66 ARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVG---MSIQTFRYFAGWCD 122
Query: 169 RVYGEIIPAT--LPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
++ G+ IP P+R L ++P+GV G + PWN+PL M+ K+ LA G TVV+KP
Sbjct: 123 KIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKP 182
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
++ TPLTAL AEL ++AG P GV+N++ G+ +G L P VRK+ FTGST +GK +
Sbjct: 183 AQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHI 242
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
M A V + +VSLELGG +P I+F D D++ AV +++ F N G+ C+ A R+ V+
Sbjct: 243 MKSCA--VSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVE 300
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
E I+++F + VK +K+GD GP +KA L+K+ + E V +GA ++ GG
Sbjct: 301 ESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGG 360
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAA 463
++ F+EPTV ++V+ M +++EE FGP+ + F + + ANDT GLA+
Sbjct: 361 KQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLAS 420
Query: 464 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
+FT ++ + VS+ LE G V VN + APFGG KQSG G++ + ++E+L+ K
Sbjct: 421 GVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTK 480
Query: 524 YV 525
V
Sbjct: 481 TV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 362 bits (933), Expect = e-120
Identities = 169/472 (35%), Positives = 249/472 (52%), Gaps = 18/472 (3%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAA 114
+ I G+W+++ + L+V+NPATGEVIA V +E A+++A AF +WS
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVL 60
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI 174
+R + + K+ LL + +EL +LITLE GK L +A G+V G + +EF + GE
Sbjct: 61 KRQQVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY 120
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLTA 233
+ + +QP+GV ITP+NFP AMI A+ACG T V+KPSE P A
Sbjct: 121 LENVARGIDTYSYRQPLGVVAGITPFNFP-AMIPLWMFPMAIACGNTFVLKPSERVPGAA 179
Query: 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
+ AEL +AG+P GV+NVV G + +ALL P ++ ++F GST VG+ + AA
Sbjct: 180 MRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANG 238
Query: 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 353
K RV G +V DADL N + A F +GQ C+ + + +++
Sbjct: 239 K---RVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWI 295
Query: 354 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 413
+ K LKVG G G GP+I+ AA E++E +E V +GAK++L GR +
Sbjct: 296 PKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVK--VP 353
Query: 414 FYE------PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467
YE PT+L NV +M + +EE+FGPV ++ T +EAI + N G A IFT
Sbjct: 354 GYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFT 413
Query: 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 517
+ + ++ G+VG+N I +A FGG K S G + YG D
Sbjct: 414 RSGAAARKFQREVDAGMVGINVP-IPVPLAFFSFGGWKGSFFG-DLHFYGKD 463
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 360 bits (925), Expect = e-120
Identities = 175/457 (38%), Positives = 251/457 (54%), Gaps = 11/457 (2%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
P TGE + + + + A + A A +W+ AER+ +++DL++ ++EL
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60
Query: 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EIIPATLPD-RRLFVLKQPVG 192
LI LE GK + A EV A +YA A+R+ +P R V ++P G
Sbjct: 61 LDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKG 120
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V G I+PWN+PL + PAL G VV+KP T LTAL A EL ++AG+P + V
Sbjct: 121 VVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQV 180
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
V G ++G A++ + FTGSTA G+ + A +++ SLELGG P IV
Sbjct: 181 VTGPGSEVGGAIVD--NADYVMFTGSTATGRVVAERAG---RRLIGCSLELGGKNPMIVL 235
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
+DADL+ A GA+ A F N+GQ CV R+ V E +Y++F F + L++G G
Sbjct: 236 EDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYG 295
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSR 431
G LI++A L++V V+DAV+KGA VL GGR R LG FYEPTVL+ V +M +
Sbjct: 296 PDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFA 355
Query: 432 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491
EE FGPV + ++EAI +ANDT+ GL A ++T + R R++ L G V VNEG
Sbjct: 356 EETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGY 415
Query: 492 ISTEV---APFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ AP GG+K SGLGR G+ ++ E + V
Sbjct: 416 AAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTV 452
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 357 bits (917), Expect = e-118
Identities = 183/464 (39%), Positives = 273/464 (58%), Gaps = 16/464 (3%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I GKW+ + K+ NPATGEV+A+V ++ A+++A AF SWS L R++
Sbjct: 26 INGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRAR 85
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPA 177
L + + H+ L +L+ GKP++E+ ++ A+ +A + +++
Sbjct: 86 HLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHA-----GWAQLLDT 140
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
L +PVGV G I PWNFPL M+ K+ PALA G TVV+KP+E+TPLTAL A
Sbjct: 141 ELAGW------KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFA 194
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVC 297
E+ +AG+PPGV+N+V GN G AL P V K+ FTGST VG+ L AGT KK
Sbjct: 195 EICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKK-- 251
Query: 298 RVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 357
+SLELGG +P IVFDDADL+ AV G + A + N GQ C +R+LVQE + E+
Sbjct: 252 -LSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLK 310
Query: 358 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 417
+ + +L+VGD + + G +++ A L+++ VE+ ++GA V G FY P
Sbjct: 311 ERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPP 370
Query: 418 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 477
T+ +NV +++EE+FGPV +L F+T +EA+ +AN+T GLAA +++ NL V+
Sbjct: 371 TLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVA 430
Query: 478 EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE 521
+L+ G+V +N + A FGG ++SG GREG K G+ E+L
Sbjct: 431 LSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLR 474
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 352 bits (905), Expect = e-116
Identities = 183/483 (37%), Positives = 253/483 (52%), Gaps = 16/483 (3%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAA 114
+ I G ++++ GKT NP G VIA V G E A+++A A W K+T A
Sbjct: 2 RNFINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVA 59
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGE 173
ER+ L D + ++ + GKP A ++ GA +A+ K E
Sbjct: 60 ERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTE 119
Query: 174 IIPATLPDRRL---FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
PD + + +++P+GV G I+PWN PL ++T KVGPALACG TVVVKPSE TP
Sbjct: 120 CFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETP 179
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS-PQVRKITFTGSTAVGKKLMAGA 289
TA E+ G+P GV NVV G PD LT P V ITFTG T G +M A
Sbjct: 180 GTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239
Query: 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 349
A VK VS ELGG IVF D D + AV G L + F N+GQ C+ RV V+ I+
Sbjct: 240 ADGVKP---VSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIF 296
Query: 350 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 409
++F A ++LK+G GPLI+ +KV ++ AV +GA V+ GG
Sbjct: 297 DRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPD 356
Query: 410 LGM-----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 464
G + +PT+ + + V EE+FGP + F +EEE I +ANDT GLAA
Sbjct: 357 FGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAAS 416
Query: 465 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524
++T +L R RV+ +E G+V VN + PFGG K SG+GREG + ++ + E+
Sbjct: 417 VWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTN 476
Query: 525 VCL 527
VC+
Sbjct: 477 VCI 479
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 349 bits (897), Expect = e-116
Identities = 172/449 (38%), Positives = 247/449 (55%), Gaps = 11/449 (2%)
Query: 80 GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLIT 139
G V+ V + A + A A +W+ ER+ LR+ DLL H +E+ I
Sbjct: 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIV 60
Query: 140 LEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITP 199
E G +A EV + A + GEI+P+ P R + P+GV G I+P
Sbjct: 61 RESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISP 119
Query: 200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAP 258
+NFPL + R V PALA G VV+KP TP++ + A L +AG+P GV++V+ G
Sbjct: 120 FNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GA 178
Query: 259 DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLN 318
D G+AL+ P V I+FTGSTAVG+K+ A +KKV SLELGG IV DDADL+
Sbjct: 179 DAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKV---SLELGGKNALIVLDDADLD 235
Query: 319 VAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 378
+A + F + GQ C+ A R LV E + + + + K+L VGD V GPL
Sbjct: 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPL 295
Query: 379 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPV 438
IN L++V V+D+V+ GA++ GG L FY PTVLS VK M EE+FGPV
Sbjct: 296 INARQLDRVHAIVDDSVAAGARLEAGGTYDGL---FYRPTVLSGVKPGMPAFDEEIFGPV 352
Query: 439 APLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VA 497
AP+ F ++EEA+ +ANDT GL+A I + ++ R +++ L G++ +N+ ++ E
Sbjct: 353 APVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHN 412
Query: 498 PFGGVKQSGLG-REGSKYGMDEFLEIKYV 525
PFGG+ SG G R G +EF + ++V
Sbjct: 413 PFGGMGASGNGSRFGGPANWEEFTQWQWV 441
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 343 bits (881), Expect = e-113
Identities = 179/475 (37%), Positives = 265/475 (55%), Gaps = 9/475 (1%)
Query: 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSK 110
+ + I G++ A + +T E +P T +A ++ + A+S+A F WS
Sbjct: 18 IENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSL 77
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKR 169
+ A+R L K DL+ AH EEL L TL+ GKP++ ++ ++ A+ I +YAE +
Sbjct: 78 SSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDK 137
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYGE+ T ++++PVGV AI PWNFPL + K+GPALA G +V++KPSE +
Sbjct: 138 VYGEVAT-TSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKS 196
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
PL+A+ A LA +AG+P GV+NVV G + G AL + I FTGST GK+L+ A
Sbjct: 197 PLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDA 256
Query: 290 AGTVKKVCRVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 348
+ K RV LE GG + IVF D DL A + A F N GQ C+ R+L++E I
Sbjct: 257 GDSNMK--RVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESI 314
Query: 349 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 408
++F + +N + G G LI+ A + V +F+ + SKG ++LL GR
Sbjct: 315 ADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA 373
Query: 409 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468
L PT+ +V +SREE+FGPV + F +EE+A+ +AND+ GL A ++T
Sbjct: 374 GL-AAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTR 432
Query: 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
+L R R+S L+ G V VN PFGG KQSG GR+ S + +++F E+K
Sbjct: 433 DLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELK 487
|
Length = 494 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 342 bits (879), Expect = e-112
Identities = 173/517 (33%), Positives = 262/517 (50%), Gaps = 25/517 (4%)
Query: 23 PSMQSYTPAFSRQMSVGMKSVTDRL-RDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA-TG 80
P + V + L R+ L+ IGGK + + +E NPA
Sbjct: 5 PFTDFADEENRAAFRAALARVREELGREYPLV-----IGGKEVRT--EEKIESRNPADPS 57
Query: 81 EVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITL 140
EV+ V +E + A+ +A AF +W + ER++ L + LL + EL + L
Sbjct: 58 EVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVL 117
Query: 141 EQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-PATLPDRRLFVLKQPVGVAGAITP 199
E GK EA +V F+E+YA E R+ G + D R +P+GV I+P
Sbjct: 118 EVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVY--RPLGVGAVISP 175
Query: 200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPD 259
WNFPLA++ AL G TVV+KP+E TP+ A E+ +AG+PPGVVN + G +
Sbjct: 176 WNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEE 235
Query: 260 IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---VKKVCRVSLELGGNAPCIVFDDAD 316
+GD L+ P VR I FTGS VG ++ AA K + RV E+GG IV +DAD
Sbjct: 236 VGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDAD 295
Query: 317 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 376
L+ A G + + F GQ C +RV+V E +Y++F + + K LKVGD V G
Sbjct: 296 LDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMG 355
Query: 377 PLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEV 434
P+I+K A +++ ++E S+G ++LLGG + F +PT+ ++V + +++EE+
Sbjct: 356 PVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEI 414
Query: 435 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 494
FGPV ++ K +EA+ +ANDT GL +F+ + + R E G + N T
Sbjct: 415 FGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRK--IT 472
Query: 495 ----EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 526
PFGG K SG G + G + +F++ K V
Sbjct: 473 GALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVT 509
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 336 bits (864), Expect = e-110
Identities = 166/457 (36%), Positives = 245/457 (53%), Gaps = 10/457 (2%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPATG+V+A V + A+++A AF W T ER++ LR+ L H EE
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L + L+ G P+ +G+V A ++++A + GE IP + L++P GV
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGV 119
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
I +N PL K+ LA G TVVVKP E PL+AL AELA + +PPGV N++
Sbjct: 120 VARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNIL 178
Query: 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313
G+ G AL+ P V++I GS G+ +M AA +K V+LELGG IVF
Sbjct: 179 PGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIK---HVTLELGGKNALIVFP 235
Query: 314 DADLNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
DAD A + A+A F GQ+C +R+ V E IY++ + V +KVGD
Sbjct: 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPA 295
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFY-EPTVLSNVKSEML 428
GPL+++ ++V +++ A +GA+++ GG R +L FY EPTV ++V M
Sbjct: 296 TTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMR 355
Query: 429 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN 488
++REE+FGPV +L ++ E E + AN GL A I+TN++ + R + +E G V +N
Sbjct: 356 IAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWIN 415
Query: 489 EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
APFGGVK SG+GRE + + + K V
Sbjct: 416 GSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 328 bits (843), Expect = e-107
Identities = 148/452 (32%), Positives = 222/452 (49%), Gaps = 7/452 (1%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
+P G VIA + + A+ A A W + ER + + +LL A+ +E+
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVA 194
+ +T + G+P+ +A GE+ + + A+ +I ++ ++P+GV
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVV 120
Query: 195 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 254
I PWN+P V PAL G V++K S TPL A +AG+P GV V+
Sbjct: 121 LIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLH 180
Query: 255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDD 314
+ AL+ P++ ++FTGS A G+ + AAG KV LELGG P V D
Sbjct: 181 LSHET-SAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVG---LELGGKDPAYVRPD 236
Query: 315 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 374
ADL+ A + F NSGQ+C R+ V E IY+ F +AF VK K+GD
Sbjct: 237 ADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTT 296
Query: 375 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL---GMTFYEPTVLSNVKSEMLVSR 431
GP+++ A + V + DA++KGA+ L+ G G + PTVL+NV M V R
Sbjct: 297 LGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMR 356
Query: 432 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491
EE FGPV ++ K++ EAI + ND+ GL A ++T ++ R + E LE G V +N
Sbjct: 357 EETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCD 416
Query: 492 ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
+ GVK SG G S+ G D+ K
Sbjct: 417 YLDPALAWTGVKDSGRGVTLSRLGYDQLTRPK 448
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 323 bits (830), Expect = e-105
Identities = 181/471 (38%), Positives = 258/471 (54%), Gaps = 22/471 (4%)
Query: 66 AYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAAERSKGLRKWY 124
+ +EV P G V+ V K + D + AF A LT ERS L +
Sbjct: 13 VSRDRVIEVRYPYNGTVVGTVP----KASVDDVRRAFAIAAAYRPTLTRYERSAILDRAA 68
Query: 125 DLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP---- 180
LL A KEE+ LITLE G K+++ EV A + F A EA R G+I L
Sbjct: 69 ALLAARKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGK 128
Query: 181 DRRLFVLKQPV-GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 239
R++F ++P+ GV AITP+N P+ + K+ PA+A +VVKPSE TPL+AL A++
Sbjct: 129 ARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADI 188
Query: 240 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRV 299
+AG+PP ++ VV G+ +I D L+T+P V +TFTG A+GK + A A R
Sbjct: 189 LYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAGYR-----RQ 243
Query: 300 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 359
LELGGN P IV +DADL+ A + A+ ++NSGQ C R+LVQE + ++F + +
Sbjct: 244 VLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEK 303
Query: 360 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTV 419
+ + GD V G +I++AA E V +A+++GA++LLG R Y PTV
Sbjct: 304 TRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDG---ALYAPTV 360
Query: 420 LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA 479
L V M + REE FGPV+P++ F ++AI ++N T GL++ + TN L R
Sbjct: 361 LDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAE 420
Query: 480 LEYGLVGVNE--GLISTEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 527
L+ G V V E G E+ PFGG+K SGLG +EG + M F +K L
Sbjct: 421 LQVGTVNVWEVPGY-RLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSL 470
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 322 bits (827), Expect = e-105
Identities = 170/470 (36%), Positives = 257/470 (54%), Gaps = 7/470 (1%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
LI G+ + +G+ V+NPATGEVI ++ ++ A+ +A AF W + T R+
Sbjct: 5 LINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARA 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L K D++ + + +L + GKPL E+ F+A A+ + G
Sbjct: 64 ECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAG 123
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
L + + P+GV +I PWN+PL M K+ PALA G VV+KPSE TPLTAL
Sbjct: 124 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKL 183
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
AELA P GVVN++ G +GD L +VR ++ TGS A G+ +++ A ++K
Sbjct: 184 AELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIK-- 240
Query: 297 CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356
R +ELGG AP IVFDDAD++ V G F N+GQ C A R+ Q GIY+ +
Sbjct: 241 -RTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKL 299
Query: 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFY 415
AV LK G E GPL + A LE+V VE+A + G KV+ GG + ++
Sbjct: 300 GAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYF 359
Query: 416 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 475
PT+L+ K + + ++EVFGPV + F EE+ ++ AND+ GLA+ ++T ++ R R
Sbjct: 360 APTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHR 419
Query: 476 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+S L+YG VN + P GG K SG G++ S YG++++ ++++
Sbjct: 420 LSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHI 469
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 314 bits (807), Expect = e-102
Identities = 174/468 (37%), Positives = 257/468 (54%), Gaps = 23/468 (4%)
Query: 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
G+ G+W G + +PA GE IA V ++ + I +A +AF W + A +R
Sbjct: 1 GVYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKR 58
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEF--YAEEAKR-VYGE 173
+ +R+ D L KE LG+L++LE GK L E +GEV + I+ +A R +YG
Sbjct: 59 GEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQ---EMIDICDFAVGLSRQLYGL 115
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233
IP+ P R+ P+GV G IT +NFP+A+ AL CG VV KPS TPLTA
Sbjct: 116 TIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTA 175
Query: 234 LAA----AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
+A A + + G+P + ++V G A D+G+AL+ P+V ++FTGSTAVG++
Sbjct: 176 IAVTKIVARVLEKNGLPGAIASLVCGGA-DVGEALVKDPRVPLVSFTGSTAVGRQ----V 230
Query: 290 AGTV-KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 348
V + R LELGGN IV +DADL++AV L A +GQ C R++V E I
Sbjct: 231 GQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESI 290
Query: 349 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 408
Y++ + KA K +++GD +G + GPL KAA++ +E+A S+G VL GG+
Sbjct: 291 YDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVI 350
Query: 409 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468
+ EPT++ S+ + +EE F P+ +L F T EEAI N+ GL++ IFT
Sbjct: 351 DGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTT 409
Query: 469 NLQR--TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE-GS 512
+L+ W + + G+V VN G E+ FGG K++G GRE GS
Sbjct: 410 DLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGS 457
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 312 bits (801), Expect = e-101
Identities = 171/456 (37%), Positives = 245/456 (53%), Gaps = 8/456 (1%)
Query: 76 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135
NPATGE + + + E AI+ A F + T A+R++ DLL A +++
Sbjct: 7 NPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVA 66
Query: 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD---RRLFVLKQPVG 192
L+TLE GK L A E AK +YAE A+ + + PA R +V QP+G
Sbjct: 67 ALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADE-PADAAAVGASRAYVRYQPLG 125
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V A+ PWNFPL + R PAL G ++K + P TAL A+L +AG P G
Sbjct: 126 VVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQT 185
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
++ + + +A+L P+V T TGS G+ + A A +KK LELGG+ P IV
Sbjct: 186 LLVGSGAV-EAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTV---LELGGSDPFIVM 241
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
ADL+ A A+ A+ +N+GQ+C+ A R +V +Y+ FA+ F + L+VGD
Sbjct: 242 PSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPD 301
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 432
GPL + ++VE V+DAV+ GA +L GG+R FY PTV++++ +M + E
Sbjct: 302 TDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTE 361
Query: 433 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 492
EVFGPVA L +EAI +AN T GL + +T + R + LE G V +N +
Sbjct: 362 EVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTV 421
Query: 493 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528
S PFGGVK+SG GRE S +G+ EF IK V +G
Sbjct: 422 SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWIG 457
|
Length = 457 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 309 bits (793), Expect = e-100
Identities = 182/482 (37%), Positives = 264/482 (54%), Gaps = 23/482 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAE 115
LI GK + G T NPAT EV+ + + AI++A AF+ WS+ TA
Sbjct: 4 LIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTAL- 61
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKP--------LKEAVGEVDYGAKFIEFYAEEA 167
R + LR+ D L AH EEL +L E G P L+ V ++ + A E Y
Sbjct: 62 RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESY--AW 119
Query: 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
G P +P RR + ++ VGV GAITPWNFP + K+GPALA G TVV+KP+
Sbjct: 120 TTDLGVASPMGIPTRRT-LRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAP 178
Query: 228 FTPLTALAAAEL-ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
TP A EL A PPGVVN+V + +G L P+V ++FTGSTA G+ +M
Sbjct: 179 DTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVM 238
Query: 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE 346
A AA T+KKV LELGG + IV DDADL A + A ++GQ C R++V
Sbjct: 239 ADAAATLKKV---FLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPR 295
Query: 347 GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 406
Y++ A + + ++K GD G V GP+I+ ++V+++++ AV++G + GG
Sbjct: 296 ARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGG 355
Query: 407 R---HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 463
R G F EPTV++ + + V+REE+FGPV ++ +++A+ +AND+ GL+
Sbjct: 356 RPADRDRGF-FVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSG 414
Query: 464 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
+F + +R V+ + G V VN G+ + APFGG KQSG+GRE G +E+LE K
Sbjct: 415 TVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETK 474
Query: 524 YV 525
+
Sbjct: 475 LI 476
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 302 bits (776), Expect = 2e-97
Identities = 159/466 (34%), Positives = 253/466 (54%), Gaps = 18/466 (3%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
++PATG+ + +V ++ +AI++A A W+K + AER K LR ++ ++EE+
Sbjct: 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEI 60
Query: 135 GQLITLEQGKPLKEAV-GEVDYGAKFIEF---YAEEAKRVYGEIIPATLPDRRLFVLKQP 190
++ + GK + +A GE+ + I + + E+A R + +R V +P
Sbjct: 61 CRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEP 120
Query: 191 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA---LAAAELALQA-GIP 246
+GV GAI WN+P + + AL G +VVK SE ++ L+ L A G
Sbjct: 121 LGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHD 180
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGN 306
P +V +V P+ +AL + P + ITF GS VGKK+MA AA ++ V LELGG
Sbjct: 181 PDLVQLVTC-LPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVV---LELGGK 236
Query: 307 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366
P IV DDADL+ + + F++SGQ C+ RV+V E IY+K + + V+ L+ G
Sbjct: 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQG 296
Query: 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFYEPTVLSN 422
V G +I+ A +++E V DAV KGA++L GG+R+ ++ PT+L +
Sbjct: 297 PPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVD 356
Query: 423 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 482
V +M +++EEVFGPV ++ +EEA+ +AN T GL A +F +++R R++ LE
Sbjct: 357 VTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLET 416
Query: 483 GLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEFLEIKYVC 526
G+V +N+ ++ V PFGGVK SG GR + G+ K V
Sbjct: 417 GMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVT 462
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = 3e-95
Identities = 171/483 (35%), Positives = 256/483 (53%), Gaps = 32/483 (6%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
IGG+W+ G+ + P TG+V V ++ + A+ +A A +W K + AER+
Sbjct: 5 IGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERAN 64
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKE--------AVGEVDYGAKFIEFYAEEAKRV 170
L K D + A+ E L T + GKP++E A+ Y A I A+E
Sbjct: 65 ILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIR--AQEGS-- 120
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
EI T+ + +P+GV G I PWNFPL M T K+ PALA G VV+KP+E TP
Sbjct: 121 ISEIDENTVA----YHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTP 176
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
+ L EL + +PPGVVNVV G + G L +S ++ K+ FTG T G+ +M A+
Sbjct: 177 ASILVLMEL-IGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235
Query: 291 GTVKKVCRVSLELGGNAPCIVF------DDADLNVAVNGALAAKFRNSGQTCVCANRVLV 344
+ + V+LELGG +P I F DDA + A+ G + N G+ C C +R L+
Sbjct: 236 ---ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALI 291
Query: 345 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404
QE IY++F + + VK +K G+ + G + LEK+ ++++ +GA+VL G
Sbjct: 292 QESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTG 351
Query: 405 GRRHSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 460
G R+ LG +Y PT ++M + +EE+FGPV + FK EEEA+ +ANDT G
Sbjct: 352 GERNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYG 410
Query: 461 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFL 520
L A ++T + +R+ ++ G V N + A FGG KQSG+GRE K +D +
Sbjct: 411 LGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQ 470
Query: 521 EIK 523
+ K
Sbjct: 471 QTK 473
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 289 bits (743), Expect = 7e-92
Identities = 142/455 (31%), Positives = 233/455 (51%), Gaps = 10/455 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+IGG+ I D + NPA EV+ VS + + A+ +A +AF +W K + +R
Sbjct: 40 IIGGERITTED--KIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDR 97
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
++ L + ++ K E + E GKP EA + F+E+YA + ++
Sbjct: 98 ARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPV 157
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ P P+GV I+PWNFP A++ A+ G TV++KP+ TP+ A
Sbjct: 158 ESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKF 217
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV--- 293
E+ +AG+P GVVN V G+ ++GD L+ P+ R ITFTGS VG ++ AA
Sbjct: 218 VEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQ 277
Query: 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 353
+ RV E+GG +V +DADL++A +A+ F SGQ C +R +V E +Y++
Sbjct: 278 IWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVL 337
Query: 354 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 413
+ + K L VG+ + GP+IN+A+ +K+ +++E +G +++LGG
Sbjct: 338 EKVVELTKELTVGNP-EDNAYMGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDSKGY 395
Query: 414 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473
F +PT+ ++V + + +EE+FGPV + K + A+ +AN+T GL + +NN +
Sbjct: 396 FIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHL 455
Query: 474 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSG 506
+ G + N G V PFGG SG
Sbjct: 456 EKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 2e-90
Identities = 162/451 (35%), Positives = 244/451 (54%), Gaps = 7/451 (1%)
Query: 76 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135
NPATGE ++ + G + ++A+ A F W + R++ LR L A EE+
Sbjct: 13 NPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMA 72
Query: 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAG 195
Q+IT E GKP+ +A EV A ++YAE + + P + +++ + +P+G
Sbjct: 73 QMITREMGKPINQARAEVAKSANLCDWYAEHGPAML-KAEPTLVENQQAVIEYRPLGTIL 131
Query: 196 AITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255
AI PWNFPL + R P L G ++K + A A++ AGIP GV +
Sbjct: 132 AIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWL-- 189
Query: 256 NAPDIG-DALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDD 314
NA + G ++ ++ +T TGS G + A A +KK LELGG+ P IV +D
Sbjct: 190 NADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCV---LELGGSDPFIVLND 246
Query: 315 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 374
ADL +AV A+A +++N+GQ C A R +++EGI F + F A LK+GD E
Sbjct: 247 ADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENA 306
Query: 375 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEV 434
GP+ +++ VE +++GA++LLGG + + +Y PTVL+NV EM REE+
Sbjct: 307 LGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREEL 366
Query: 435 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 494
FGPVA + K E A+ +AND+ GL+A IFT + + +++ LE G V +N S
Sbjct: 367 FGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASD 426
Query: 495 EVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
FGGVK+SG GRE S +G+ EF I+ V
Sbjct: 427 ARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 8e-86
Identities = 163/456 (35%), Positives = 229/456 (50%), Gaps = 19/456 (4%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAF---NSWSKLTAAERSKGLRKWYDLLM 128
LEV NP + I V + A+ +A F N+W L A ER L + DL+
Sbjct: 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLME 58
Query: 129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRL 184
+EL LI E GKPL +A EV +E A+E ++ G IP L R
Sbjct: 59 ERADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIA 118
Query: 185 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 244
F ++P+GV AI+ +N PL +I +V PA+A GC V+VKP+ TPL+ LA +L +AG
Sbjct: 119 FTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAG 178
Query: 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG-AAGTVKKVCRVSLEL 303
+P G V + + L+T P+V +F GS VG L + A GT R +LE
Sbjct: 179 LPEGWCQAVPCEN-AVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPGT-----RCALEH 232
Query: 304 GGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 363
GG AP IV ADL+ + + F ++GQ CV RV V I + FA + A + L
Sbjct: 233 GGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKL 292
Query: 364 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 423
VGD GPLI +++VE +V +AV+ GA++L GG+R L T Y PTVL +
Sbjct: 293 VVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKR--LSDTTYAPTVLLDP 350
Query: 424 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 483
+ VS +E+FGPV + + +EAI AN A +FT +L + L+
Sbjct: 351 PRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDAT 410
Query: 484 LVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDE 518
V VN+ + PF G +QSG G G Y M +
Sbjct: 411 AVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHD 446
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 267 bits (685), Expect = 8e-84
Identities = 148/436 (33%), Positives = 226/436 (51%), Gaps = 11/436 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
IGGK+ + G + V NPAT EV V+ E A++SA + F +W + + A+R+
Sbjct: 4 WIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRT 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
L ++ LL H++E+ +LIT E GK +A+G+V G + +E + GE
Sbjct: 64 SVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQ 123
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP-ALACGCTVVVKPSEFTPLTALAA 236
++ ++QP+GV ITP+NFP AMI + P A+ACG T V+KPSE P A+
Sbjct: 124 VATRVDVYSIRQPLGVCAGITPFNFP-AMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKL 182
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
AEL +AG P GV+NVV G+ + D LL P V+ ++F GST +G+ + + K
Sbjct: 183 AELFSEAGAPDGVLNVVHGDKEAV-DRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGK-- 239
Query: 297 CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356
RV G +V DAD + A + + A + +GQ C+ A V G +++
Sbjct: 240 -RVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCM-AISAAVLVGAADEWVPEI 297
Query: 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL----GM 412
+ + +++G G G GPLI A ++V + + ++GA+VLL GR + +
Sbjct: 298 RERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEG 357
Query: 413 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472
+ PT+L V M +EE+FGPV +L T EEAI + N + G IFT +
Sbjct: 358 NWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAA 417
Query: 473 TWRVSEALEYGLVGVN 488
R +E G VGVN
Sbjct: 418 ARRFQHEIEVGQVGVN 433
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 263 bits (675), Expect = 8e-83
Identities = 154/438 (35%), Positives = 224/438 (51%), Gaps = 29/438 (6%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
+ A+++A AF W+ L+ ER+ LR++ +LL A+KEEL +LI+ E GKPL EA E
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTE 60
Query: 153 VDYGAKFIEF----YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208
V A I+ Y E R P + R + +P GV P+NFP +
Sbjct: 61 VAAMAGKIDISIKAYHE---RTGERATP--MAQGRAVLRHRPHGVMAVFGPFNFPGHLPN 115
Query: 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 268
+ PAL G TVV KPSE TP A EL +AG+PPGV+N+V G + G+AL
Sbjct: 116 GHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHE 174
Query: 269 QVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAK 328
+ + FTGS A G L AG K+ ++LE+GGN P +V+D AD++ A + +
Sbjct: 175 GIDGLLFTGSAATGLLLHRQFAGRPGKI--LALEMGGNNPLVVWDVADIDAAAYLIVQSA 232
Query: 329 FRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 387
F +GQ C CA R++V +G + F + +A K L++G E GPLI AA +
Sbjct: 233 FLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARY 292
Query: 388 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFK 445
+D ++ G + LL R G F P ++ ++ V EE+FGP+ + +
Sbjct: 293 LLAQQDLLALGGEPLLAMERLVAGTAFLSPGIIDVTDAAD---VPDEEIFGPLLQVYRYD 349
Query: 446 TEEEAIHMANDTNAGLAAYIFTNN---LQRTWRVSEALEYGLVGVNE---GLISTEVAPF 499
+EAI +AN T GL+A + +++ +R A G+V N G ST APF
Sbjct: 350 DFDEAIALANATRFGLSAGLLSDDEALFERFLARIRA---GIVNWNRPTTGASST--APF 404
Query: 500 GGVKQSGLGREGSKYGMD 517
GGV SG R + Y D
Sbjct: 405 GGVGLSGNHRPSAYYAAD 422
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 255 bits (652), Expect = 2e-78
Identities = 143/460 (31%), Positives = 225/460 (48%), Gaps = 14/460 (3%)
Query: 76 NPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
NP EV+ VS + + A+ +A AF +W K ER+ L K ++ + E
Sbjct: 52 NPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEERAAILFKAAAIVRRRRHEF 111
Query: 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVA 194
L+ E GKP EA EV F+E+YA + + + + P GV
Sbjct: 112 SALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIELAKGKPVNSREGETNQYVYTPTGVT 171
Query: 195 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 254
I+PWNFP A++ + G VV+KP+E P+ A E+ +AG+P GVV V
Sbjct: 172 VVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVP 231
Query: 255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---VKKVCRVSLELGGNAPCIV 311
G+ ++GD L+ P+ ITFTGS VG ++ AA K + RV E+GG IV
Sbjct: 232 GSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGKDTVIV 291
Query: 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371
+DAD+ +A A + F +GQ C +R +V E +Y++ + F + ++LKVG
Sbjct: 292 DEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPPDSA 351
Query: 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 431
V GP+I++ + K+ ++E ++G +++ GG F PT+ ++V + +++
Sbjct: 352 DVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKGYFIGPTIFADVDRKARLAQ 410
Query: 432 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491
EE+FGPV + +EA+ +AN+T GL + +NN R E G + N +
Sbjct: 411 EEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFNRNI 470
Query: 492 ISTEVA--PFGGVKQSGLGREGSKYG----MDEFLEIKYV 525
V PFGG K SG SK G + F++ K V
Sbjct: 471 TGAIVGYQPFGGFKMSGT---DSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 254 bits (652), Expect = 2e-78
Identities = 151/459 (32%), Positives = 221/459 (48%), Gaps = 16/459 (3%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGE-VIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+I G + G+ V +PA E I VS ++ A++ A AF WS ER
Sbjct: 36 IING--EETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEER 93
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
++ L K DLL A++ EL L E GK L +A EV F +YA +A+ ++ +
Sbjct: 94 AEILEKAADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPEL 153
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ GV I+PWNFPLA+ T ++ ALA G TV+ KP+E TPL A A
Sbjct: 154 PGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARA 213
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
EL +AG+P V+ +V G+ +IG+AL+ P++ + FTGST K + A +
Sbjct: 214 VELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPI 273
Query: 297 CRVSLELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFAD 354
+ E GG NA IV A AV + + F ++GQ C A R+L +QE I E+F +
Sbjct: 274 LPLIAETGGKNA-MIVDSTALPEQAVKDVVQSAFGSAGQRC-SALRLLYLQEEIAERFIE 331
Query: 355 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 414
A+ +LKVGD + GPLI+K A + + E + A ++ F
Sbjct: 332 MLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTE-LMRGEAWLIAPAPLDDGNGYF 390
Query: 415 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQR 472
P ++ V L EVFGP+ ++ FK E +EAI N T GL I + + +R
Sbjct: 391 VAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRD-ER 447
Query: 473 TWR-VSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG 508
E +E G + +N + PFGG SG G
Sbjct: 448 EIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 248 bits (636), Expect = 5e-77
Identities = 142/418 (33%), Positives = 215/418 (51%), Gaps = 35/418 (8%)
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA--------VGEVDYGAKFIEFYAEEA 167
R L+ +L ++EE+ + + GKP EA +GE+D+ K ++ + +
Sbjct: 22 RKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKP- 80
Query: 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
+RV +P L + +V+ +P+GV I PWN+PL + + A+A G TVV+KPSE
Sbjct: 81 RRVS---VPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSE 137
Query: 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
P T+ A+L + P V VV G ++ ALL P I FTGS AVGK +M
Sbjct: 138 LAPATSALLAKL-IPKYFDPEAVAVVEG-GVEVATALLAEP-FDHIFFTGSPAVGKIVME 194
Query: 288 GAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 347
AA K + V+LELGG +PCIV DA+L VA KF N+GQTC+ + VLV E
Sbjct: 195 AAA---KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHES 251
Query: 348 IYEKFADAFSKAVKNLKVGDGFGEGVVQ----GPLINKAALEKVETFVEDAVSKGAKVLL 403
I ++ + KA+K +GE + G +IN+ +++ + ++D KV++
Sbjct: 252 IKDELIEELKKAIKEF-----YGEDPKESPDYGRIINERHFDRLASLLDDG-----KVVI 301
Query: 404 GGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 463
GG+ PT+L +V + + +EE+FGP+ P+L + +EAI N LA
Sbjct: 302 GGQVDKEERYI-APTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLAL 360
Query: 464 YIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEF 519
Y+F+ + RV G V VN+ L+ + PFGGV SG+G K G D F
Sbjct: 361 YLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTF 418
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 247 bits (631), Expect = 1e-75
Identities = 150/497 (30%), Positives = 241/497 (48%), Gaps = 15/497 (3%)
Query: 40 MKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAIS 99
M+ R+++ +IGG+W+D + V A EV+ + E + A+
Sbjct: 4 MREALRRVKEEFGRAYPLVIGGEWVDTKERMV-SVSPFAPSEVVGTTAKADKAEAEAALE 62
Query: 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159
+A+ AF +W +R++ L K DLL + EL +T E GK EA+ +V F
Sbjct: 63 AAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDF 122
Query: 160 IEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216
I +YA A R+ E++P D F +G I+PWNFP+A+ T + +A
Sbjct: 123 IRYYARAALRLRYPAVEVVPYPGEDNESFY--VGLGAGVVISPWNFPVAIFTGMIVAPVA 180
Query: 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276
G TV+ KP+E + E+ +AG PPGVV + G ++G L ++R I FT
Sbjct: 181 VGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFT 240
Query: 277 GSTAVGKKLMAGAAGTVKK---VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 333
GS GKK+ AA R+ +E GG IV + AD + V G + + F G
Sbjct: 241 GSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQG 300
Query: 334 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393
Q C A+R+++ +G YE + K + L VG G GP+I+ KV +++E
Sbjct: 301 QKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEH 360
Query: 394 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE--EAI 451
++G +++LGG+R F PTV+ V + +++EE+FGPV ++ +K ++ EA+
Sbjct: 361 GKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEAL 419
Query: 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG- 508
+AN T GL +++ + G + +N + V PFGG K SG
Sbjct: 420 EVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA 479
Query: 509 REGSKYGMDEFLEIKYV 525
+ G + + FLE+K V
Sbjct: 480 KTGGPHYLRRFLEMKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 241 bits (617), Expect = 2e-73
Identities = 149/465 (32%), Positives = 227/465 (48%), Gaps = 24/465 (5%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
G+W + GK++ + NP+T + V +E A+ SA A +W+K +R+
Sbjct: 19 YADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRA 78
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE---- 173
+ L K +L HK + + + E KP K+AV EV I + AEE R+ GE
Sbjct: 79 ELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFL 138
Query: 174 ---IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
P ++ K P+GV AI P+N+P+ + K+ PAL G VV+KP
Sbjct: 139 VSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGA 198
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG---STAVGKKLMA 287
+ AL AG P G+++ V G +IGD L P V I+FTG A+ KK
Sbjct: 199 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKK--- 255
Query: 288 GAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 347
AG V + +ELGG CIV +DADL++A + F SGQ C VLV E
Sbjct: 256 --AGMVP----LQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMES 309
Query: 348 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 407
+ + + + V L VG + + P++++++ +E V DA KGA +R
Sbjct: 310 VADALVEKVNAKVAKLTVGPPEDDCDIT-PVVSESSANFIEGLVMDAKEKGATFCQEWKR 368
Query: 408 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467
P +L NV+ +M ++ EE FGPV P++ + EE IH N +N GL +FT
Sbjct: 369 EG---NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 425
Query: 468 NNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREG 511
++ + +S+A+E G V +N + PF G+K SG+G +G
Sbjct: 426 RDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQG 470
|
Length = 496 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 237 bits (608), Expect = 8e-73
Identities = 138/438 (31%), Positives = 204/438 (46%), Gaps = 52/438 (11%)
Query: 108 WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA 167
TAAER L++ ++A +EE+ + + KP EVD E
Sbjct: 14 LRASTAAERIAKLKRLKKAILARREEIIAALAADFRKP----AAEVD---------LTEI 60
Query: 168 KRVYGEI-----------------IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
V EI P L + + +P GV I+PWN+P +
Sbjct: 61 LPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGP 120
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 270
+ A+A G T ++KPSE TP T+ A++ +A V V G+A ++ ALL P
Sbjct: 121 LVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDA-EVAQALLELP-F 177
Query: 271 RKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 330
I FTGS AVGK +MA AA K + V+LELGG +P IV + ADL A KF
Sbjct: 178 DHIFFTGSPAVGKIVMAAAA---KHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFL 234
Query: 331 NSGQTCVCANRVLVQEGIYEKFADAFSKAV-KNLKVGDGFGEGVVQGP----LINKAALE 385
N+GQTC+ + V V E + + F + + K G P ++N +
Sbjct: 235 NAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFY----GKDAARKASPDLARIVNDRHFD 290
Query: 386 KVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 445
+++ ++DAV+KGAKV GG+ + PTVL+NV +M + +EE+FGPV P++ ++
Sbjct: 291 RLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYE 349
Query: 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA----PFGG 501
+E I N LA Y+F+ + +V G V VN+ ++ PFGG
Sbjct: 350 DLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVL--HFLNPNLPFGG 407
Query: 502 VKQSGLGREGSKYGMDEF 519
V SG+G YG F
Sbjct: 408 VNNSGIGSYHGVYGFKAF 425
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 8e-72
Identities = 151/466 (32%), Positives = 236/466 (50%), Gaps = 17/466 (3%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I GKW G++ NPAT EV+ + + + A+++A AF +W++L+ ER
Sbjct: 3 IDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIA 61
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV-DYGAKF---IEFYAEEAKRVYGEI 174
++++ LL KE L ++I E GKPL E EV K I+ Y E
Sbjct: 62 VVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP- 120
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234
+PD R + +P GV P+NFP + + PAL G TVV KPSE TP A
Sbjct: 121 ----MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 176
Query: 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
+L +AG+P GV+N+V G A + G AL P + + FTGS+ G L AG +
Sbjct: 177 ETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235
Query: 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFA 353
K+ ++LE+GGN P IV + AD++ AV+ + + F ++GQ C CA R+LV +G + F
Sbjct: 236 KI--LALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFL 293
Query: 354 DAFSKAVKNLKVGDGFGEGV-VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 412
+ + L VG E G +I+ A +++ ++ G K LL R+ G
Sbjct: 294 ARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGA 353
Query: 413 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472
P ++ +V + EE FGP+ ++ + +EAI +AN+T GL+A + +++ +
Sbjct: 354 ALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDREL 412
Query: 473 TWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMD 517
R + G+V N+ L ++ APFGG+ SG R + Y D
Sbjct: 413 YDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD 458
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 2e-70
Identities = 154/474 (32%), Positives = 227/474 (47%), Gaps = 33/474 (6%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G WI A G+ E NP +GEV+ + + A+ +A AF +W++L+ ER
Sbjct: 5 INGDWI-AGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQA 63
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEF----YAEEAKRVYGEI 174
+ ++ LL +KEEL ++I E GKPL EA EV I Y E E
Sbjct: 64 IVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE- 122
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234
+ D + +P GV P+NFP + + PAL G TVV KPSE TP A
Sbjct: 123 ----MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 178
Query: 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
+L QAG+P GV+N+V G + G AL P + + FTGS G L AG +
Sbjct: 179 LTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPE 237
Query: 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFA 353
K+ ++LE+GGN P ++ + AD++ AV+ + + F ++GQ C CA R+LV +G + F
Sbjct: 238 KI--LALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFL 295
Query: 354 DAFSKAVKNLKVGDGFGEGV-VQGPLI-NKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411
K L VG E G +I +AA V ++ G K LL + G
Sbjct: 296 ARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQ-AQLLALGGKSLLEMTQLQAG 354
Query: 412 MTFYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 469
P ++ + V + EE FGP+ ++ + +EAI +AN+T GL+A + +++
Sbjct: 355 TGLLTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDD 411
Query: 470 ---LQRTWRVSEALEYGLVGVNE---GLISTEVAPFGGVKQSGLGREGSKYGMD 517
+ A G+V N+ G S APFGGV SG R + Y D
Sbjct: 412 REDYDQFLLEIRA---GIVNWNKPLTGASSA--APFGGVGASGNHRPSAYYAAD 460
|
Length = 487 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 2e-70
Identities = 149/459 (32%), Positives = 235/459 (51%), Gaps = 14/459 (3%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
+GG+W +G + NPA + IA V ++ ++ + + +A W ++ A +R +
Sbjct: 25 VGGEW--RANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGE 82
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 178
+R+ D L A + LG+L++LE GK L E +GEV +F ++++ G IIP+
Sbjct: 83 IVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSE 142
Query: 179 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA--- 235
P+ + + P+G+ G IT +NFP A++ AL CG VV K + TPL +A
Sbjct: 143 RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTK 202
Query: 236 -AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
AE+ + +P + G A +IG+A+ ++ ++FTGS+ VG LM
Sbjct: 203 LVAEVLEKNNLPGAIFTSFCGGA-EIGEAIAKDTRIPLVSFTGSSKVG--LMVQQT-VNA 258
Query: 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 354
+ + LEL GN IV DDAD+ +AV L A +GQ C R+L+ E IY+ +
Sbjct: 259 RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLE 318
Query: 355 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 414
K +K+GD +G + GPL + + E +E S+G K+L GG F
Sbjct: 319 QLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNF 378
Query: 415 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR-- 472
+PT++ + + V +EE+FGPV ++ FKT EEAI + N GL++ IFT N +
Sbjct: 379 VQPTIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIF 437
Query: 473 TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 510
W + G+V VN E+ FGG K +G GRE
Sbjct: 438 KWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
|
Length = 508 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 3e-69
Identities = 137/443 (30%), Positives = 213/443 (48%), Gaps = 44/443 (9%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV------ 150
S F S R L++ Y + ++E + + + + G+P E +
Sbjct: 10 IHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSG 69
Query: 151 --GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF---VLKQPVGVAGAITPWNFPLA 205
++ + K ++ +A++ K + + K+P+GV I PWN+P+
Sbjct: 70 VKNDILHMLKNLKKWAKDEK------VKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPV- 122
Query: 206 MITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGD 262
++ + P A+A GCTVV+KPSE TP TA AEL + + P VV G P+
Sbjct: 123 LLA--LSPLVGAIAAGCTVVLKPSELTPHTAALLAEL-VPKYLDPDAFQVVQGGVPETT- 178
Query: 263 ALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVN 322
ALL KI +TGS VG+ + AA K + V+LELGG +P IV +ADL +A
Sbjct: 179 ALLEQK-FDKIFYTGSGRVGRIIAEAAA---KHLTPVTLELGGKSPVIVTKNADLELAAK 234
Query: 323 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP----L 378
L KF N+GQ CV + VLV +Y++F + K + + G P +
Sbjct: 235 RILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEF-----YPGGANASPDYTRI 289
Query: 379 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPV 438
+N ++++ ++ +KG KV++GG F PT++S+V + + EE+FGPV
Sbjct: 290 VNPRHFNRLKSLLDT--TKG-KVVIGGEM-DEATRFIPPTIVSDVSWDDSLMSEELFGPV 345
Query: 439 APLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-- 496
P++ +EAI + N + LA YIFT++ + G V +N+ LI V
Sbjct: 346 LPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDN 405
Query: 497 APFGGVKQSGLGREGSKYGMDEF 519
APFGGV SG G KYG D F
Sbjct: 406 APFGGVGDSGYGAYHGKYGFDTF 428
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 1e-68
Identities = 134/423 (31%), Positives = 214/423 (50%), Gaps = 45/423 (10%)
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV--------GEVDYGAKFIEFYAEEA 167
R + L+K + ++ E+ + + + GK EA E++Y K ++ + +
Sbjct: 22 RIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKP- 80
Query: 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTVVVK 224
KRV + P + ++ +P GV I PWN+P + + P A+A G T V+K
Sbjct: 81 KRVKTPL--LNFPSKS-YIYYEPYGVVLIIAPWNYPFQLA---LAPLIGAIAAGNTAVLK 134
Query: 225 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 284
PSE TP T+ A++ ++ V VV G + LL I FTGS VGK
Sbjct: 135 PSELTPNTSKVIAKI-IEETFDEEYVAVVEGGV-EENQELLDQK-FDYIFFTGSVRVGKI 191
Query: 285 LMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 344
+M AA K + V+LELGG +PCIV +DA+L +A + KF N+GQTCV + VLV
Sbjct: 192 VMEAAA---KHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLV 248
Query: 345 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAK 400
E + EKF + +K +GE ++ P +IN+ +++ +++ K
Sbjct: 249 HESVKEKFIKELKEEIKKF-----YGEDPLESPDYGRIINEKHFDRLAGLLDN-----GK 298
Query: 401 VLLGGR--RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 458
++ GG R +L + EPT+L NV + V +EE+FGP+ P+L + T +EAI +
Sbjct: 299 IVFGGNTDRETL---YIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRP 355
Query: 459 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGM 516
LA Y+F+ + + +V E L +G +N+ ++ + PFGGV SG+G KY
Sbjct: 356 KPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSF 415
Query: 517 DEF 519
D F
Sbjct: 416 DTF 418
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 224 bits (574), Expect = 8e-68
Identities = 130/367 (35%), Positives = 177/367 (48%), Gaps = 70/367 (19%)
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQ 242
V QP+GV G I PWN+PL + +GP ALA G V++KPSEFTP T+ AEL L
Sbjct: 97 VEYQPLGVVGIIVPWNYPL-YLA--LGPLIAALAAGNRVMIKPSEFTPRTSALLAEL-LA 152
Query: 243 AGIPPGVVNVVMGNAPDIGDA--------LLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
V VV G D+ A LL FTGSTAVG+ +M AA +
Sbjct: 153 EYFDEDEVAVVTG-GADVAAAFSSLPFDHLL---------FTGSTAVGRHVMRAAA---E 199
Query: 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 354
+ V+LELGG +P I+ DADL A K N+GQTCV + VLV E E+F
Sbjct: 200 NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVA 259
Query: 355 AFSKAVKNLKVGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKV--------- 401
A AV + + P +IN+ +++ +EDA +KGA+V
Sbjct: 260 AAKAAVAKM-----YPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGED 313
Query: 402 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 461
R+ PT++ NV +M V +EE+FGP+ P+L + + +EAI N L
Sbjct: 314 FAATRK-------LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPL 366
Query: 462 AAYIFTNN-------LQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGS 512
A Y F + L+RT S G V +N+ L ++ + PFGGV SG+G
Sbjct: 367 ALYYFGEDKAEQDRVLRRT--HS-----GGVTINDTLLHVAQDDLPFGGVGASGMGAYHG 419
Query: 513 KYGMDEF 519
K G F
Sbjct: 420 KEGFLTF 426
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (572), Expect = 7e-67
Identities = 129/434 (29%), Positives = 206/434 (47%), Gaps = 25/434 (5%)
Query: 103 DAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA--------VGEVD 154
++F + R + LR +L +K+E + + + G+ E V E++
Sbjct: 18 ESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIE 77
Query: 155 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214
+ K ++ Y + K V P + +++ +P+GV I WN+PL + + A
Sbjct: 78 HLLKHLDEYLKPEK-VDTVG--VFGPGKS-YIIPEPLGVVLVIGAWNYPLNLTLIPLAGA 133
Query: 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 274
+A G TVV+KPSE +P T+ A+L L + P V V+ G LL P I
Sbjct: 134 IAAGNTVVLKPSELSPHTSKLMAKL-LTKYLDPSYVRVIEGGVEVT-TELLKEP-FDHIF 190
Query: 275 FTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 334
FTGS VGK +M AA + + +LELGG +P IV +L VA KF N+GQ
Sbjct: 191 FTGSPRVGKLVMQAAA---ENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQ 247
Query: 335 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 394
TCV + VLV I +KF +A +A+K G+ + ++N+ +++ ++D
Sbjct: 248 TCVAPDYVLVHRSIKDKFIEALKEAIKEF-FGEDPKKSEDYSRIVNEFHTKRLAELIKD- 305
Query: 395 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 454
G KV+ GG + + PT++ N + + +EE+FGP+ P+L ++ +E +
Sbjct: 306 --HGGKVVYGG-EVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFI 362
Query: 455 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGS 512
N LA Y F + + V E G V +N+ + + PFGGV SG+G
Sbjct: 363 NSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHG 422
Query: 513 KYGMDEFLEIKYVC 526
KYG D F K V
Sbjct: 423 KYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 222 bits (567), Expect = 3e-65
Identities = 159/481 (33%), Positives = 247/481 (51%), Gaps = 16/481 (3%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
R LIGG ++++ ++V NPAT EV++ V +E K A+S+A AF W
Sbjct: 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPI 172
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
R + + K+ +L+ + ++L IT EQGK LK++ G++ G + +E A GE
Sbjct: 173 TTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGE 232
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP-ALACGCTVVVKPSEFTPLT 232
+P + +++P+GV I P+NFP AMI + P A+ CG T ++KPSE P
Sbjct: 233 YLPNVSNGVDTYSIREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNTFILKPSEKDPGA 291
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
++ AELA++AG+P GV+N+V G D +A+ +R ++F GS G + A AA
Sbjct: 292 SVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAK 350
Query: 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 352
K R+ +G +V DA+++ +N LAA F +GQ C+ + V V G + +
Sbjct: 351 GK---RIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTV-VFVGDAKSW 406
Query: 353 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR----- 407
D + K LKV G GP+I+K A E++ ++ V GAK+LL GR
Sbjct: 407 EDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPG 466
Query: 408 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467
+ G F PT+LS V +M +EE+FGPV + + +EAI + N G A IFT
Sbjct: 467 YEKG-NFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFT 525
Query: 468 NNLQRTWRVSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGLGREG--SKYGMDEFLEIKY 524
++ + +E G +G+N + + F G K S G K G+D F +IK
Sbjct: 526 SSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKL 585
Query: 525 V 525
V
Sbjct: 586 V 586
|
Length = 604 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 210 bits (536), Expect = 3e-62
Identities = 142/441 (32%), Positives = 216/441 (48%), Gaps = 39/441 (8%)
Query: 95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEV 153
+A+ A +AF+S R + L +L +++E+ + + + KP EAV E+
Sbjct: 1 AEAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEI 60
Query: 154 DYGAKFIEFYA-----EEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208
I+ YA E K + ATL D +++ K+P+GV I WN+PL +
Sbjct: 61 LLVKNEIK-YAISNLPEWMKPEPVKKNLATLLDD-VYIYKEPLGVVLIIGAWNYPLQLTL 118
Query: 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP----PGVVNVVMGNAPDIGDAL 264
+ A+A G VV+KPSE +P TA AEL IP VV+G +
Sbjct: 119 VPLVGAIAAGNCVVIKPSEVSPATAKLLAEL-----IPKYLDKECYPVVLGGVEET--TE 171
Query: 265 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGA 324
L + I +TGST+VGK +M AA K + V+LELGG +PC V D++VA
Sbjct: 172 LLKQRFDYIFYTGSTSVGKIVMQAAA---KHLTPVTLELGGKSPCYVDKSCDIDVAARRI 228
Query: 325 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ----GPLIN 380
KF N+GQTC+ + VL + EKF +A K +K + +GE + G +IN
Sbjct: 229 AWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLK-----EFYGEDPKESPDYGRIIN 283
Query: 381 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAP 440
++++ + G KV +GG + + PTVL++VK V +EE+FGP+ P
Sbjct: 284 DRHFQRLKKLLS-----GGKVAIGG-QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILP 337
Query: 441 LLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAP 498
++ +EAI N LA Y+F+NN + ++ G V VN+ + + + P
Sbjct: 338 IVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLP 397
Query: 499 FGGVKQSGLGREGSKYGMDEF 519
FGGV SG+G KY D F
Sbjct: 398 FGGVGNSGMGAYHGKYSFDTF 418
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 203 bits (517), Expect = 5e-59
Identities = 145/478 (30%), Positives = 216/478 (45%), Gaps = 29/478 (6%)
Query: 58 LIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+IG + DG+ V NPA +++ V + AI SA AF +W+ A ER
Sbjct: 41 IIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKER 98
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L + DLL H EL L E GK + A+ EV F +YA++ + V GE
Sbjct: 99 AAKLDRLADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGEFS- 157
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ GV I+PWNFPLA+ T ++ ALA G TV+ KP+E T L A A
Sbjct: 158 -----------VESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRA 206
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
EL +AG P G + ++ G D+G AL + P++ + FTGST V + + A
Sbjct: 207 VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAP 266
Query: 297 CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADA 355
+ E GG IV A V L + F ++GQ C A RVL VQE + ++
Sbjct: 267 VPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRC-SALRVLCVQEDVADRVLTM 325
Query: 356 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG---AKVLLGGRRHSLGM 412
A++ LKVG GP+I+ A + + +E A++ L R
Sbjct: 326 IQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHG 385
Query: 413 TFYEPTVLS-NVKSEMLVSREEVFGPVAPLLCFKTEE--EAIHMANDTNAGLAAYIFTNN 469
TF PT+ + +E+ EEVFGPV ++ +K E + + N T GL + +
Sbjct: 386 TFVAPTLFELDDIAEL---SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRI 442
Query: 470 LQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG-REGSKYGMDEFLEIKY 524
+ + G VN + V PFGG SG G + G + + +++Y
Sbjct: 443 ETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY 500
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 197 bits (504), Expect = 2e-54
Identities = 148/466 (31%), Positives = 225/466 (48%), Gaps = 52/466 (11%)
Query: 65 DAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKW 123
DG T V NPA +V+ V+ ++ + A+++A AF WS AAER+ L +
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERA 621
Query: 124 YDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRR 183
DL+ AH EL L E GK L A+ EV F+ +YA +A+R L
Sbjct: 622 ADLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARR--------LLNGPG 673
Query: 184 LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 243
+P+G I+PWNFPLA+ T ++ AL G TV+ KP+E TPL A A L +A
Sbjct: 674 H----KPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEA 729
Query: 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK---KLMAGAAGTVKKVCRVS 300
G+P + ++ G+ +G AL+ P++ + FTGST V + + +A +G V ++
Sbjct: 730 GVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSG--PPVPLIA 787
Query: 301 LELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSK 358
E GG NA IV A V +A+ F ++GQ C A RVL +QE + ++
Sbjct: 788 -ETGGQNA-MIVDSSALPEQVVADVIASAFDSAGQRC-SALRVLCLQEDVADRVLTMLKG 844
Query: 359 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM------ 412
A+ L++GD + GP+I+ A +E +E + G V H L +
Sbjct: 845 AMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLV------HQLPLPAETEK 898
Query: 413 -TFYEPTV--LSNVKSEMLVSREEVFGPVAPLLCFKTEE-----EAIHMANDTNAGLAAY 464
TF PT+ + ++ S++ EVFGPV ++ FK +E + I N T GL
Sbjct: 899 GTFVAPTLIEIDSI-SDL---EREVFGPVLHVVRFKADELDRVIDDI---NATGYGLTFG 951
Query: 465 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG 508
+ + + V+ + G + VN +I V PFGG SG G
Sbjct: 952 LHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 194 bits (494), Expect = 8e-54
Identities = 143/450 (31%), Positives = 216/450 (48%), Gaps = 26/450 (5%)
Query: 68 DGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDL 126
G+ V NPA +++ V+ + + A+ +A A WS AER+ L + DL
Sbjct: 125 GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADL 184
Query: 127 LMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFV 186
+ A +L L+ E GK L A+ EV F+ +YA +A+ +G +
Sbjct: 185 MEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------L 232
Query: 187 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 246
+P+G I+PWNFPLA+ T ++ ALA G +V+ KP+E TPL A A L +AG+P
Sbjct: 233 THRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVP 292
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGN 306
PGV+ ++ G +G AL +V + FTGST V + + A + + E GG
Sbjct: 293 PGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQ 352
Query: 307 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKAVKNLKV 365
IV A V LA+ F ++GQ C A RVL +QE + ++ A+ L+V
Sbjct: 353 NAMIVDSSALAEQVVADVLASAFDSAGQRC-SALRVLCLQEDVADRILTMLKGAMAELRV 411
Query: 366 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTV--LSN 422
G+ GP+I+ A +E ++ SKG V +SL TF PT+ L N
Sbjct: 412 GNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELEN 471
Query: 423 VKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 480
+ E+ + EVFGPV ++ +K + +E I N T GL + T + V+E
Sbjct: 472 L-DEL---QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERA 527
Query: 481 EYGLVGVNEGLISTEVA--PFGGVKQSGLG 508
G + VN ++ V PFGG SG G
Sbjct: 528 HAGNLYVNRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 194 bits (496), Expect = 2e-53
Identities = 151/474 (31%), Positives = 230/474 (48%), Gaps = 53/474 (11%)
Query: 64 IDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 122
I +G+ V +PA V+ V+ ++ + A+++A AF +WS+ ER+ L +
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILER 615
Query: 123 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP-- 180
DLL A++ EL L E GK L++A+ EV F +YA +A+R++G P LP
Sbjct: 616 AADLLEANRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGA--PEKLPGP 673
Query: 181 ---DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
L + GV I+PWNFPLA+ +V ALA G TV+ KP+E TPL A A
Sbjct: 674 TGESNELRL--HGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAV 731
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK---KLMAGAAGTVK 294
+L +AGIP V+ ++ G+ +G AL P++ + FTGST + + +A G +
Sbjct: 732 KLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPI- 790
Query: 295 KVCRVSL--ELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYE 350
V L E GG NA IV A V+ + + FR++GQ C A RVL VQE I +
Sbjct: 791 ----VPLIAETGGQNA-MIVDSTALPEQVVDDVVTSAFRSAGQRC-SALRVLFVQEDIAD 844
Query: 351 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 410
+ + A+ LKVGD GP+I+ A ++ +E + + A++L L
Sbjct: 845 RVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIE-RMKREARLL-----AQL 898
Query: 411 GM-------TFYEPTV--LSNVKSEMLVSREEVFGPVAPLLCFKTEE-----EAIHMAND 456
+ F PT + ++ EVFGP+ ++ +K + +AI N
Sbjct: 899 PLPAGTENGHFVAPTAFEIDSIS----QLEREVFGPILHVIRYKASDLDKVIDAI---NA 951
Query: 457 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG 508
T GL I + + R+++ + G V VN I V PFGG SG G
Sbjct: 952 TGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 184 bits (470), Expect = 7e-53
Identities = 114/347 (32%), Positives = 171/347 (49%), Gaps = 20/347 (5%)
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 245
++ +P+GV I+ WNFP + V A+A G VV+KPSE P T+ A+L + +
Sbjct: 97 IVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKL-IPEYL 155
Query: 246 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGG 305
+ V+ G ALL + KI FTGS VG+ +MA AA K + V+LELGG
Sbjct: 156 DTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAA---KHLTPVTLELGG 210
Query: 306 NAPCIVFDDADLNVAVNGALAAKF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 364
P IV DL VAV K+ N+GQ C+ + VLV+E DA ++
Sbjct: 211 KCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKF- 269
Query: 365 VGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 420
FGE + ++N +++ ++D S K++ GG R + + EPT+L
Sbjct: 270 ----FGENPKESKDLSRIVNSHHFQRLSRLLDDP-SVADKIVHGGERDEKNL-YIEPTIL 323
Query: 421 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 480
+ + + EE+FGP+ P++ K EE+I + N LAAY+FT N + R+
Sbjct: 324 LDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAET 383
Query: 481 EYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEFLEIKYV 525
G V N+ ++ + PFGGV +SG G K+ D F K V
Sbjct: 384 SSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAV 430
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 1e-44
Identities = 120/354 (33%), Positives = 174/354 (49%), Gaps = 31/354 (8%)
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 245
V+ +P+GV + WNFP+ + + A+A G VV+KPSE P T +A LA A I
Sbjct: 104 VVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPAT---SAFLA--ANI 158
Query: 246 P----PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSL 301
P V V+ G P +G+ LL KI FTGS VG+ +M AA K + V+L
Sbjct: 159 PKYLDSKAVKVIEG-GPAVGEQLLQHKW-DKIFFTGSPRVGRIIMTAAA---KHLTPVAL 213
Query: 302 ELGGNAPCIV--FDDA-DLNVAVNGALAAKFRN-SGQTCVCANRVLVQEGIYEKFADAFS 357
ELGG PCIV + D VAVN + K+ + +GQ C+ + VLV+E +
Sbjct: 214 ELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLK 273
Query: 358 KAVKNLKVGDGFGEGVVQ----GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 413
+K FGE + ++NK +++ ++D A ++ GG +
Sbjct: 274 STIKKF-----FGENPRESKSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSIDEKKL- 326
Query: 414 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473
F EPT+L N + + EE+FGP+ P++ K E++I N LA Y FTNN +
Sbjct: 327 FIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLK 386
Query: 474 WRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
R+ G V N+ +I + + PFGGV +SG GR KY D F K V
Sbjct: 387 RRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAV 440
|
Length = 484 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 4e-43
Identities = 130/480 (27%), Positives = 223/480 (46%), Gaps = 50/480 (10%)
Query: 58 LIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+IGGK + G T + P V+A + AI +A +A W+++ +R
Sbjct: 36 VIGGKEV--RTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDR 93
Query: 117 SKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDYGAK---FIEFYAEEAKRVYG 172
+ K DLL ++ EL L QGK + +A E+D + F+ F + A+ +Y
Sbjct: 94 AAIFLKAADLLSGKYRYELNAATMLGQGKNVWQA--EIDAACELIDFLRFNVKYAEELYA 151
Query: 173 EIIPATLPDRRLFVLKQPV-GVAGAITPWNF-------PLAMITRKVGPALACGCTVVVK 224
+ ++ + +P+ G A++P+NF A PAL G V+ K
Sbjct: 152 QQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGA-------PALM-GNVVLWK 203
Query: 225 PSEFTPLTALAAAELALQ----AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTA 280
PS+ TA+ + L + AG+PPGV+N V G+ P +GD +L SP + + FTGST
Sbjct: 204 PSD----TAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTP 259
Query: 281 VGKKLMAGAA---GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 337
K L + R+ E GG +V AD++ V + F GQ C
Sbjct: 260 TFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCS 319
Query: 338 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA-VS 396
A+R V E ++ + + + +K +K+GD G +I++ A ++++ +++ A
Sbjct: 320 AASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSD 379
Query: 397 KGAKVLLGGR-RHSLGMTFYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKTE--EEAI 451
A+++ GG+ S+G F EPTV+ ++ K +++ EE+FGPV + + EE +
Sbjct: 380 PEAEIIAGGKCDDSVGY-FVEPTVIETTDPKHKLMT--EEIFGPVLTVYVYPDSDFEETL 436
Query: 452 HMANDTNA-GLAAYIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PFGGVKQSG 506
+ + T+ L IF + + ++AL G +N+ V PFGG + SG
Sbjct: 437 ELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 6e-43
Identities = 130/467 (27%), Positives = 212/467 (45%), Gaps = 23/467 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+IGG+ + G+ + +P V+A + + A+ +A DA WS L +R
Sbjct: 35 VIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKEWSLLPFYDR 93
Query: 117 SKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDYGAK---FIEFYAEEAKRVYG 172
+ K DLL ++ E+ L Q K + +A E+D A+ F F A+ A+ +Y
Sbjct: 94 AAIFLKAADLLSGPYRAEILAATMLGQSKTVYQA--EIDAVAELIDFFRFNAKYARELYE 151
Query: 173 EIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
+ P + P +P+ G AI+P+NF PAL G TV+ KPS+ L
Sbjct: 152 QQ-PISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAML 209
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL---MAG 288
+ + +AG+PPGV+N V G+ P + D +L P + I FTGST K L +A
Sbjct: 210 SNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQ 269
Query: 289 AAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 348
R+ E GG +V AD+ V+G + F GQ C +R+ V +
Sbjct: 270 NLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSL 329
Query: 349 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA--KVLLGGR 406
+ +F + +KVGD G G +I++ + K+ ++E A S + +L GG+
Sbjct: 330 WPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGK 389
Query: 407 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF---KTEEEAIHMANDTNAGLAA 463
F EPTV+ + + + +EE+FGPV + + K +E + + T+ GL
Sbjct: 390 YDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTG 449
Query: 464 YIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PFGGVKQSG 506
+F + + L + G +N+ V PFGG + SG
Sbjct: 450 AVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 4e-42
Identities = 141/457 (30%), Positives = 215/457 (47%), Gaps = 35/457 (7%)
Query: 68 DGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDL 126
G+ V NPA +++ V E + A+ SA +A W AER+ L + DL
Sbjct: 657 AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADL 716
Query: 127 LMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFV 186
+ A + L L+ E GK A+ EV F+ +YA + + + T
Sbjct: 717 MEAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFDN---DT-------- 765
Query: 187 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 246
+P+G I+PWNFPLA+ T +V ALA G +V+ KP+E TPL A A + L+AG+P
Sbjct: 766 -HRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVP 824
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCR-VSL--EL 303
GVV ++ G +G AL+ +VR + FTGST V + L AG + R + L E
Sbjct: 825 AGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAET 884
Query: 304 GGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKAVKN 362
GG IV A V LA+ F ++GQ C A RVL +Q+ + ++ A+
Sbjct: 885 GGQNAMIVDSSALTEQVVADVLASAFDSAGQRC-SALRVLCLQDDVADRTLKMLRGAMAE 943
Query: 363 LKVG--DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM---TFYEP 417
++G D + GP+I+ A +E ++ +KG V R +S TF P
Sbjct: 944 CRMGNPDRLSTDI--GPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPP 1001
Query: 418 TV--LSNVKSEMLVSREEVFGPVAPLLCFKTEE--EAIHMANDTNAGLAAYIFTNNLQRT 473
T+ L + E+ + EVFGPV ++ + + E I N + GL + T +
Sbjct: 1002 TLIELDSF-DEL---KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETI 1057
Query: 474 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG 508
+V+ + G + VN ++ V PFGG SG G
Sbjct: 1058 AQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094
|
Length = 1318 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 2e-39
Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 18/346 (5%)
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 245
++ +P+GV I+ WN+P + V A++ G VV+KPSE P ++ A+L L+ +
Sbjct: 108 IVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKL-LEQYL 166
Query: 246 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGG 305
V VV G + L + KI +TGS+ +G+ +MA AA K + V LELGG
Sbjct: 167 DSSAVRVVEGAVTET--TALLEQKWDKIFYTGSSKIGRVIMAAAA---KHLTPVVLELGG 221
Query: 306 NAPCIVFDDADLNVAVNGALAAKFR-NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 364
+P +V D DL V V +A K+ N+GQ C+ + +L + K DA K ++
Sbjct: 222 KSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETF- 280
Query: 365 VGDGFGEGVVQGPLINKAALEKVETFV-EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 423
G E ++N +++ + E VS K++ GG + + PT+L +V
Sbjct: 281 YGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSD--KIVYGGEKDRENLKI-APTILLDV 337
Query: 424 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 483
+ L+ EE+FGP+ P+L EE+ + LAAY+FT+N + R + + G
Sbjct: 338 PLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAG 397
Query: 484 LVGVNEGLISTEVA----PFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ VN+ I+ +A PFGGV +SG+G K+ D F K V
Sbjct: 398 GIVVND--IAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAV 441
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 6e-33
Identities = 124/454 (27%), Positives = 193/454 (42%), Gaps = 62/454 (13%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAA 114
Q + G+W A G +H+ TGEV+A VS G + A++ A + + LT
Sbjct: 2 QSYVAGQWH-AGTGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFH 59
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----- 169
ER+ L+ LM KE+L ++ G +++ ++D G + YA +R
Sbjct: 60 ERAAMLKALAKYLMERKEDLYA-LSAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNA 118
Query: 170 ---VYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
V G++ P T + + ++ GVA I +NFP+ + K PAL G V+
Sbjct: 119 HFLVEGDVEPLSKDGTFVGQHILTPRR--GVAVHINAFNFPVWGMLEKFAPALLAGVPVI 176
Query: 223 VKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
VKP+ T A + +++G+ P G + ++ G+ D+ D L V + FTGS A
Sbjct: 177 VKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL-GEQDV--VAFTGSAAT 233
Query: 282 GKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDAD-LNVAVNGALAAK------------ 328
KL A V + R + E AD LN A+ G A
Sbjct: 234 AAKLRAHPN-IVARSIRFNAE------------ADSLNAAILGPDATPGTPEFDLFVKEV 280
Query: 329 FRN----SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 384
R +GQ C R V E + +A + + VGD EGV GPL+++
Sbjct: 281 AREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQR 340
Query: 385 EKVETFVEDAVSKGAKVLLGGRRHSLGM-------TFYEPTVL--SNVKSEMLVSREEVF 435
E V V + A+V+ GG + F+ PT+L + + V E F
Sbjct: 341 EDVRAAVA-TLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAF 399
Query: 436 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 469
GPVA L+ + + EAI +A L A + TN+
Sbjct: 400 GPVATLMPYDSLAEAIELAARGRGSLVASVVTND 433
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 5e-30
Identities = 115/432 (26%), Positives = 179/432 (41%), Gaps = 30/432 (6%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAA 114
Q + G+W G+ + V + +TGEV+A V+ G + A++ A + + LT
Sbjct: 2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTS-EGLDVAAAVAWAREVGGPALRALTFH 59
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----- 169
ER++ L+ L KE L L G ++ ++D G + Y+ +R
Sbjct: 60 ERARMLKALAQYLSERKEALYAL-AATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDA 118
Query: 170 ---VYGEIIPATLPDRRLF----VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
E P L F +L GVA I +NFP+ + K PA G +
Sbjct: 119 NLIPEDEFEP--LSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTL 176
Query: 223 VKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
KP+ T A A +++G+ P G + ++ G+A D+ D L V FTGS A
Sbjct: 177 AKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAGDLLDHLDHRDVV---AFTGSAAT 233
Query: 282 GKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN-----SGQTC 336
+L A +++ R + E I+ +DA + A + +GQ C
Sbjct: 234 ADRLRAHPN-VLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKC 292
Query: 337 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 396
RV+V + + E A + + +GD EGV GPL++ VE V ++
Sbjct: 293 TAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLA 352
Query: 397 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM-LVSREEVFGPVAPLLCFKTEEEAIHMAN 455
GA+V LGG G F+ PT+L V E FGPVA + EA +A
Sbjct: 353 AGAEVRLGGPGRLDG-AFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAA 411
Query: 456 DTNAGLAAYIFT 467
L A + T
Sbjct: 412 RGGGSLVATLAT 423
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 3e-28
Identities = 118/450 (26%), Positives = 190/450 (42%), Gaps = 61/450 (13%)
Query: 59 IGGKWID-AYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF------NSWSKL 111
+ G+W + G L +P TGE + VS G +++AF AF + L
Sbjct: 9 VAGRWQAGSGAGTPL--FDPVTGEELVRVSATGLD-----LAAAF-AFAREQGGAALRAL 60
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 171
T A+R+ L +L A+++ + T G ++ ++D G + +YA+
Sbjct: 61 TYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAK------ 114
Query: 172 GEIIPATLPDRRLFVLKQPV------------------GVAGAITPWNFPLAMITRKVGP 213
+ A L D RL + V GVA I +NFP + K P
Sbjct: 115 ---LGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAP 171
Query: 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRK 272
AL G V+VKP+ T + + AGI P G ++VV G++ + D L V
Sbjct: 172 ALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHLQPFDVV-- 229
Query: 273 ITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKF--- 329
+FTGS L + A V++ RV++E ++ DA +
Sbjct: 230 -SFTGSAETAAVLRSHPA-VVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVRE 287
Query: 330 --RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 387
SGQ C R+ V E +Y+ A+A + + VG+ +GV GPL+++A L V
Sbjct: 288 MTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAV 347
Query: 388 ETFVEDAVSKGAKVLLGGRRHSL------GMTFYEPTVL--SNVKSEMLVSREEVFGPVA 439
+ A+ A+VL G +L PT+L S+ + V EVFGPVA
Sbjct: 348 RAGLA-ALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVA 406
Query: 440 PLLCFKTEEEAIHMANDTNAGLAAYIFTNN 469
LL ++ A+ +A L A +++++
Sbjct: 407 TLLPYRDAAHALALARRGQGSLVASVYSDD 436
|
Length = 521 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 1e-25
Identities = 107/378 (28%), Positives = 148/378 (39%), Gaps = 60/378 (15%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYG 156
A ++A AF S+ L+ A R+ L D + A +EL E G P GE+
Sbjct: 4 AAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRT 63
Query: 157 AKFIEFYAEEAKR--VYGEII--------PATLPD-RRLFVLKQPVGVAGAITPWNFPLA 205
+ +A+ + I P PD RR+ V PV V GA NFPLA
Sbjct: 64 TGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGAS---NFPLA 120
Query: 206 MITRKVG----PALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNA 257
G ALA GC VVVK P T+ A A G+P GV +++ G
Sbjct: 121 FSV--AGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGG 178
Query: 258 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCR-----VSLELGGNAPCIVF 312
++G AL+ P ++ + FTGS G+ L AA R ELG P +
Sbjct: 179 REVGVALVKHPAIKAVGFTGSRRGGRALFDAAAA------RPEPIPFYAELGSVNPVFIL 232
Query: 313 DDADLNVAVNG-ALAAKFRNS-----GQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKV 365
A +A G A+A F S GQ C VLV G + F A ++A+
Sbjct: 233 PGA---LAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA 289
Query: 366 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKS 425
G+ + AL G +VL GG G PT+ V +
Sbjct: 290 QTMLTPGIAEAYRQGVEALAAA---------PGVRVLAGGAAAEGGNQ-AAPTLFK-VDA 338
Query: 426 EMLVS----REEVFGPVA 439
++ +EEVFGP +
Sbjct: 339 AAFLADPALQEEVFGPAS 356
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 94/421 (22%), Positives = 155/421 (36%), Gaps = 35/421 (8%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYG 156
A+ +A + + +L +R+ L + L A ++ L GK A +
Sbjct: 4 ALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFA-ENICGD 62
Query: 157 AKFIEFYAE--EAKRVYGEIIPATLPDRRLFVLKQ--PVGVAGAITPWNFPLAMITRKVG 212
+ A + R+ E + P G I +NFPL + ++
Sbjct: 63 QVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLA 122
Query: 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVR 271
ALA G V+VKP + L AG+ PP V ++ G+ ALL P +
Sbjct: 123 GALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDG-KTMQALLLHPNPK 181
Query: 272 KITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAK-FR 330
+ FTGS+ V +KL A K R+ LEL G ++ DA V
Sbjct: 182 MVLFTGSSRVAEKLALDA-----KQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTA 236
Query: 331 NSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 389
SGQ C + + V E + + K+ D ++ GP+ L +
Sbjct: 237 CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLED-----LLLGPVQTFTTLAMIAH 291
Query: 390 FVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLS--------NVKSEMLVSREEVFGPVA 439
G+ +L G+ + Y V S +K+ LV+ EE+FGP A
Sbjct: 292 MENLL---GSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVT-EEIFGPFA 347
Query: 440 PLLCFKTEEEA--IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA 497
++ +K ++ A + + + L A I++N+ + L T VA
Sbjct: 348 IVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVA 407
Query: 498 P 498
P
Sbjct: 408 P 408
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 2e-22
Identities = 120/449 (26%), Positives = 193/449 (42%), Gaps = 44/449 (9%)
Query: 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSK 110
+ + Q + G+W G+ +H+ TGE +A VS G + A++ A + +
Sbjct: 2 MQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSS-EGLDFAAALAYAREVGGPALRA 59
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR- 169
LT ER+ L+ L+ KEEL L + + G +++ +++ G + YA + +R
Sbjct: 60 LTFHERAAMLKALAKYLLERKEELYAL-SAQTGATRRDSWIDIEGGIGTLFTYASKGRRE 118
Query: 170 -------VYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 218
V GE+ P T R + + GVA I +NFP+ + K+ PA G
Sbjct: 119 LPNDTVLVEGEVEPLSKGGTFAGRHILTPLE--GVAVHINAFNFPVWGMLEKLAPAFLAG 176
Query: 219 CTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 277
+VKP+ T A L +++G+ P G + ++ G+A D+ D L V +TFTG
Sbjct: 177 VPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAGDLLDH-LDGQDV--VTFTG 233
Query: 278 STAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDA-------DLNV-AVNGALAAKF 329
S A +KL A V + E I+ DA DL V V + K
Sbjct: 234 SAATAQKLRAHPN-VVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVK- 291
Query: 330 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 389
+GQ C R +V + + +A + + VGD EGV G L + E V
Sbjct: 292 --AGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVRE 349
Query: 390 FVEDAVSKGAKVLLGGRRHSLGM-------TFYEPTVLS--NVKSEMLVSREEVFGPVAP 440
V A+ A+++ GG + F+ PT+L + V E FGPV+
Sbjct: 350 KV-AALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVST 408
Query: 441 LLCFKTEEEAIHMANDTNAGLAAYIFTNN 469
L+ + +EAI +A L A + T +
Sbjct: 409 LMPYDDLDEAIELAARGKGSLVASLVTAD 437
|
Length = 675 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 9e-10
Identities = 108/432 (25%), Positives = 168/432 (38%), Gaps = 71/432 (16%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAE 115
L+ GKW A + + +P G+ +V E + + S S + L E
Sbjct: 2 LVAGKWKGASN--YTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59
Query: 116 RSKGLRKWYDLLMAHKEELGQ---------LITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
R + D+ EL + LI K +A+GEV KF+E +A +
Sbjct: 60 R---YLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGD 116
Query: 167 AKRVY--GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 224
R +P ++ + P G ITP+NFPL + ++ AL G ++K
Sbjct: 117 QVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLK 176
Query: 225 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 284
+ L G+P V+++ + P + LL + R FTGS+ V ++
Sbjct: 177 VDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEA-NPRMTLFTGSSKVAER 235
Query: 285 LMAGAAGTVKKVCRVSLELGGN-----APCIVFDDADLNVAVNGALAAKFRNSGQTCVCA 339
L G VK LE G P + D A A SGQ C A
Sbjct: 236 LALELHGKVK------LEDAGFDWKILGPDVSDVDYVAWQCDQDAYAC----SGQKC-SA 284
Query: 340 NRVL------VQEGIYEKFAD-AFSKAVKNLKVGDGFGEGVVQGPLI---NKAALEKVET 389
+L VQ GI +K A + +++L + GP++ + L+ V+
Sbjct: 285 QSILFAHENWVQAGILDKLKALAEQRKLEDLTI----------GPVLTWTTERILDHVDK 334
Query: 390 FVEDAVSKGAKVLLGGR---RHSLGMTF--YEPTV----LSNVKSEM---LVSREEVFGP 437
+ GAKVL GG+ HS+ + YEPT L + E LV+ EVFGP
Sbjct: 335 LLA---IPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTT-EVFGP 390
Query: 438 VAPLLCFKTEEE 449
+ +K E+
Sbjct: 391 FQVVTEYKDEQL 402
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 67/260 (25%), Positives = 103/260 (39%), Gaps = 31/260 (11%)
Query: 214 ALACGCTVVVKPSEFTPL----TALAAAELALQAGIPPGVVNVVMGNAPD-IGDALLTSP 268
+LA G V+VKP L T A E+ +AG P +V + + I L T P
Sbjct: 217 SLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRP 276
Query: 269 QVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAK 328
+VR I FTGS A G L A A V E G +V D D A+ LA
Sbjct: 277 EVRIIDFTGSNAFGDWLEANARQAQ-----VYTEKAGVNTVVV-DSTDDLKAMLRNLAFS 330
Query: 329 FR-NSGQTCVCANRVLV-QEGI--------YEKFADAFSKAVKNLKVGDGFGEGVVQGPL 378
SGQ C + V ++GI +++ A + A+ L + D + G +
Sbjct: 331 LSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAI 389
Query: 379 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEV 434
+ L ++ + +VLL + P +L S+ EE
Sbjct: 390 QSPDTLARIA-----EARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEER 444
Query: 435 FGPVAPLLCFKTEEEAIHMA 454
FGP+A ++ + + +I +A
Sbjct: 445 FGPIAFVVATDSTDHSIELA 464
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 97/407 (23%), Positives = 152/407 (37%), Gaps = 73/407 (17%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG------KPLK-E 148
DA+++A A + K T A+R K + + L+++ EEL ++ E G K K
Sbjct: 8 DAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKIAKNH 67
Query: 149 AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQ-PVGVAGAITPWNFPLAMI 207
E G E A G D L +++ P GV GAITP P I
Sbjct: 68 LAAEKTPG---TEDLTTTA--WSG--------DNGLTLVEYAPFGVIGAITPSTNPTETI 114
Query: 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDA 263
LA G VV P + A EL +AG P +V V + +
Sbjct: 115 INNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNE 174
Query: 264 LLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELG---GNAPCIVFDDADL-NV 319
L+ P + + TG AV K ++ + KK +G GN P +V + AD+
Sbjct: 175 LMAHPDINLLVVTGGPAVVKAALS----SGKKA------IGAGAGNPPVVVDETADIEKA 224
Query: 320 AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI 379
A + A F N+ C+ V+ + + + A + G L
Sbjct: 225 ARDIVQGASFDNN-LPCIAEKEVIAVDSVADYLIAAMQR------------NGAYV--LN 269
Query: 380 NKAALEKVETFVEDA---------VSKGAKVLLGGRRHSLGMTFYEPTVLSNV---KSEM 427
++ A + +E + V K A +L + G+ L V K
Sbjct: 270 DEQAEQLLEVVLLTNKGATPNKKWVGKDASKILK----AAGIEVPADIRLIIVETDKDHP 325
Query: 428 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQR 472
V EE P+ P++ K +EAI +A + G A I + N++
Sbjct: 326 FVV-EEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN 371
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 55.6 bits (135), Expect = 3e-08
Identities = 75/317 (23%), Positives = 120/317 (37%), Gaps = 78/317 (24%)
Query: 189 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAG 244
+PVGV A+ P P + K AL ++ P ++ AA++ A+ AG
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 245 IPPGVVNVVMGNAPDI--GDALLTSPQVRKITFTGSTAVGKKLMAGAA---GTVKKVCRV 299
P G++ + P I L+ P V I TG M AA G
Sbjct: 154 APEGLIQWI--EEPSIELTQELMKHPDVDLILATGGPG-----MVKAAYSSGKP------ 200
Query: 300 SLELG-GNAPCIVFDDADLNVAVNGALAAK-FRNSGQTCVCA--NRVLVQEGIYEKFADA 355
++ +G GN P + + AD+ AV + +K F N +CA V+V + IY++
Sbjct: 201 AIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNG---TICASEQSVIVDDEIYDEVRAE 257
Query: 356 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE--------DAVSKGAKVLLGGRR 407
+ G +N+ EK+E + D V K A+ +
Sbjct: 258 LKR------------RGAY---FLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAEL-- 300
Query: 408 HSLGMTFYEPTVLSNVKSEMLVSREEVFGP--------VAPLLCF---KTEEEAIHMAND 456
G+ E T + LV+ E GP ++P+L F + EEA+ A +
Sbjct: 301 --AGIEVPEDTKV-------LVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARE 351
Query: 457 --TNAGLA--AYIFTNN 469
G A I +N+
Sbjct: 352 LLEYGGAGHTAVIHSND 368
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 5e-08
Identities = 105/440 (23%), Positives = 165/440 (37%), Gaps = 94/440 (21%)
Query: 73 EVHNPATGEVIANVSCMGGKET-KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
E+ + T A V MG + DA+++A A + + + A R + + + L+ H
Sbjct: 16 EMLSSQTVSPPAAVGEMGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHA 75
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG--EIIPATLPDRRLFVLKQ 189
EEL +L E G +G V+ K + A A++ G ++ L L +
Sbjct: 76 EELAELAVEETG------MGRVE--DKIAKNVAA-AEKTPGVEDLTTEALTGDNGLTLIE 126
Query: 190 --PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQA 243
P GV GA+TP P I LA G +VV P +L A EL + A
Sbjct: 127 YAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAA 186
Query: 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV-------GKKLM-AGAAGTVKK 295
G P +V V + L+ P + + TG AV GKK + AGA
Sbjct: 187 GGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMKSGKKAIGAGA------ 240
Query: 296 VCRVSLELGGNAPCIVFDDADLNVA----VNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
GN P +V + AD+ A V G A F N+ C+ V+V + + ++
Sbjct: 241 ---------GNPPVVVDETADIEKAARDIVKG---ASFDNN-LPCIAEKEVIVVDSVADE 287
Query: 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV--------EDAVSKGAKVLL 403
K G V + EK++ V + V K A +L
Sbjct: 288 LMRLMEK------------NGAVL---LTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKIL 332
Query: 404 GGRRHSLGMTFYEPTVL---------SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 454
G+ + T L V +E+++ PV P++ K +EAI +A
Sbjct: 333 EA----AGINVPKDTRLLIVETDANHPFVVTELMM-------PVLPVVRVKDVDEAIALA 381
Query: 455 NDTNAGL--AAYIFTNNLQR 472
G A + + N+
Sbjct: 382 VKLEHGNRHTAIMHSRNVDN 401
|
Length = 465 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 9e-08
Identities = 72/269 (26%), Positives = 109/269 (40%), Gaps = 31/269 (11%)
Query: 190 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT----PLTALAAAELALQAGI 245
P G+A I FP + +LA G V+VKP LT A E+ +AG
Sbjct: 193 PRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGF 252
Query: 246 PPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELG 304
P +V + + + L T P VR I FTGS A G+ L A + +V E
Sbjct: 253 DPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNA-----RQAQVYTEKA 307
Query: 305 GNAPCIVFDDADLN-VAVNGALAAKFRNSGQTCVCANRVLV-QEGI--------YEKFAD 354
G I+ D + N A + SGQ C +LV ++GI Y++ A
Sbjct: 308 GVNTVIIESTDDYKAMLRNLAFSLSLY-SGQMCTTTQAILVPRDGIRTDQGRKSYDEVAA 366
Query: 355 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----L 410
+ A+ L +GD V G + + L + + +A + G +VLL +
Sbjct: 367 DLATAIDGL-LGDPARATAVLGAIQSPDTLAR----IAEARALG-EVLLASTKIEHPEFP 420
Query: 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVA 439
G P +L ++ +E FGP+A
Sbjct: 421 GARVRTPLLLKCDAADEAAYMQERFGPIA 449
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 2e-06
Identities = 62/271 (22%), Positives = 105/271 (38%), Gaps = 25/271 (9%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDY 155
DA+++A A S + R + + +L +L E G E
Sbjct: 3 DAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVED------ 56
Query: 156 GAKFIE--FYAEEAKRVY-GEIIPATLPDRRLF---VLKQPVGVAGAITPWNFPLAMITR 209
K I+ F AE VY E L ++ +P+GV +ITP P + +
Sbjct: 57 --KVIKNHFAAEYIYNVYKDEKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIF 114
Query: 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG--NAPDI--GDALL 265
K +L +++ P AA L LQA + G ++G + P I L+
Sbjct: 115 KSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLM 174
Query: 266 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGAL 325
P + + TG G ++ A + K V GN P ++ + AD+ AV +
Sbjct: 175 KFPGIGLLLATG----GPAVVKAAYSSGKPAIGVG---AGNTPVVIDETADIKRAVQSIV 227
Query: 326 AAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356
+K ++G C V+V + +Y++ F
Sbjct: 228 KSKTFDNGVICASEQSVIVVDSVYDEVMRLF 258
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 4e-05
Identities = 51/273 (18%), Positives = 108/273 (39%), Gaps = 17/273 (6%)
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG-KPLKEAV 150
++ ++ I SA A + +T + K ++ D + +L ++ E G ++ V
Sbjct: 8 QQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKV 67
Query: 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
+ + A + ++ K + I+ + + + PVGV + P P + K
Sbjct: 68 IKNVFAATIVYDSIKDMKTI--GILSEDKEKK-VIEIAVPVGVVAGLIPSTNPTSTAIYK 124
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLT 266
++ +V P + +L A +AG P G + + + + L+
Sbjct: 125 TLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMK 184
Query: 267 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELG-GNAPCIVFDDADLNVAVNGAL 325
+ I TG A+ K A ++GT ++ +G GN P + A++ AV +
Sbjct: 185 NKDTSLILATGGEAMVKA--AYSSGT------PAIGVGPGNGPAYIERTANVKKAVRDII 236
Query: 326 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 358
+K ++G C ++V+E + + K
Sbjct: 237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKK 269
|
Length = 488 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 6e-04
Identities = 46/195 (23%), Positives = 68/195 (34%), Gaps = 21/195 (10%)
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
+ ++P +V P+GV I P PL+ IT +A + +P
Sbjct: 82 HIQDVLLPDNG---ETYVRAFPIGVTMHILPSTNPLSGIT-SALRGIATRNQCIFRPHPS 137
Query: 229 TPLTALAAAELALQAGIPPGVVN--VVMGNAPDI--GDALLTSPQVRKITFTGSTAVGKK 284
P T A A L QA V+ P + LL+ P++ I TG
Sbjct: 138 APFTNRALA-LLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDA 196
Query: 285 LMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFR-----NSGQTCVCA 339
A V GN+P +V + AD A +KF S Q
Sbjct: 197 --AVKHSPHIPVIGFG---AGNSPVVVDETADEERASGSVHDSKFFDQNACASEQNLYVV 251
Query: 340 NRVLVQEGIYEKFAD 354
+ VL + +YE+F
Sbjct: 252 DDVL--DPLYEEFKL 264
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|237515 PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 0.003
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 48/217 (22%)
Query: 190 PVGVAGAITPWNFP---------LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL- 239
PVGV ITP P +A+ TR ++ +++AAA++
Sbjct: 108 PVGVIAGITPTTNPTSTAIFKALIALKTR---------NPIIFSFHPRAQKSSIAAAKIV 158
Query: 240 ---ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
A+ AG P ++ + + ++ +AL+ P + I TG M AA + K
Sbjct: 159 LDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPG-----MVKAAYSSGKP 213
Query: 297 CRVSLELG-GNAPCIVFDDADLNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIYEKFAD 354
+L +G GN P + AD+ AVN L +K F N G C V+V + IY++ +
Sbjct: 214 ---ALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDN-GMICASEQAVIVDDEIYDEVKE 269
Query: 355 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391
F+ +NK L+K+E F+
Sbjct: 270 EFASH---------------GAYFLNKKELKKLEKFI 291
|
Length = 862 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 533 | |||
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.94 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.75 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.44 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.19 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.92 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.74 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.57 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.48 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 97.08 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.02 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.9 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 96.83 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.74 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 96.64 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.62 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 87.32 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 84.76 |
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-122 Score=894.13 Aligned_cols=476 Identities=66% Similarity=1.055 Sum_probs=465.4
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
+.+.||+|+|+++.++++|+|.||++||.|+.|++++.+|.++||++|.+||++|++++..+|.++|++|.++|.+|.++
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 56789999999998999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|.|||+.||++||.++..+++||++++++.+|+.+|...+.+...+.++|+||+++|+|||||.+++.++..+
T Consensus 103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccC---ChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG---NAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g---~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
||++||+||+||+++||++++.++++..+||+|+|++|+|++ +..++|+.|+.+|+|++|+||||+.+|+.++++++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsa 262 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSA 262 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhh
Confidence 999999999999999999999999999999999999999996 34589999999999999999999999999999999
Q ss_pred cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 291 ~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
.++|+ +.+|||||.|+||++|||+|+|++..+.++|.++||.|.|++|+|||++|||+|+.+|.++++++++||.+|
T Consensus 263 stvKk---vslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~ 339 (503)
T KOG2451|consen 263 STVKK---VSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLD 339 (503)
T ss_pred hhhhh---eehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCC
Confidence 99999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
+++++||+|+..+.++++.++++|+++|+++++||+... .+++|++|||+.+++++|.+.+||+|||+.+|++|+|+||
T Consensus 340 ~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeE 419 (503)
T KOG2451|consen 340 PGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEE 419 (503)
T ss_pred CCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHH
Confidence 999999999999999999999999999999999999544 6679999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+|+++|+++.||++|+||+|.++..+++++|++|+|.+|...+++...||||+|+||+||||+.||+++|+..|+|+++.
T Consensus 420 vi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~ 499 (503)
T KOG2451|consen 420 VIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGT 499 (503)
T ss_pred HHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC
Q 009516 530 MNR 532 (533)
Q Consensus 530 ~~~ 532 (533)
|.+
T Consensus 500 L~~ 502 (503)
T KOG2451|consen 500 LPI 502 (503)
T ss_pred ccC
Confidence 754
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-114 Score=878.91 Aligned_cols=471 Identities=46% Similarity=0.724 Sum_probs=455.3
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.++||||+|+++.++++++++||.||+++++|+.++.+||+.||++|++||+ .|+.++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 3689999999999999999999999999999999999999999999999999 69999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|+.+.+.+.|||+.+++ .|+..+++.++||+++++...+..++.. .....+++++|+|||+.|+|||||+.+..|++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~-~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTD-GEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCC-CceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999999 8999999999999999988866655433 35688999999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
+|||++||+||+||+++||++++.+++++.++|+|+||+|+|+|.|.+.|.+|++|++|++|+||||+.+|+.|+++++.
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~ 259 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAE 259 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred -CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-CccCCCC
Q 009516 292 -TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGF 369 (533)
Q Consensus 292 -~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~ 369 (533)
++|| ++||||||+|.||++|||+|.|++.++.+.|+|+||+|++.+|+|||++|||+|+++++++.++ +++|||+
T Consensus 260 ~n~K~---vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~ 336 (501)
T KOG2450|consen 260 SNLKP---VTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPF 336 (501)
T ss_pred cCCce---eccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCC
Confidence 5898 9999999999999999999999999999999999999999999999999999999999999966 9999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++.+.+||++++.|++|+.++|+.++++||++++||.+....|+|++|||+.++.++|.+++||+||||+.|++|++.||
T Consensus 337 ~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE 416 (501)
T KOG2450|consen 337 DEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEE 416 (501)
T ss_pred CcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHH
Confidence 99999999999999999999999999999999999988655689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+|+++|+++|||+++|||+|.+++++++.++++|+||||++...+...||||+|.||+||+.|.+++++||+.|+|+++.
T Consensus 417 ~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~ 496 (501)
T KOG2450|consen 417 VIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL 496 (501)
T ss_pred HHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998863
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-109 Score=881.46 Aligned_cols=474 Identities=58% Similarity=1.033 Sum_probs=451.2
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
+...++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 8 ~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~ 87 (482)
T PRK11241 8 LFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQ 87 (482)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 33446899999998666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
++|++++++|+|||+.+++.|+..+++.++||+..+++..+...+...++...+++++|+|||++|+|||||+.+.++++
T Consensus 88 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (482)
T PRK11241 88 DDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167 (482)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHH
Confidence 99999999999999999999999999999999999887766654443345567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+++|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~ 247 (482)
T PRK11241 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK 247 (482)
T ss_pred HHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++
T Consensus 248 ~l~~---~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~ 324 (482)
T PRK11241 248 DIKK---VSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEK 324 (482)
T ss_pred cCCc---EEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
++++||++++.+++++.+++++|+++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 325 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 404 (482)
T PRK11241 325 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVI 404 (482)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999999997643357999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||++||||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 405 ~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 405 AQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 99999999999999999999999999999999999999877667789999999999999999999999999999765
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-107 Score=865.81 Aligned_cols=465 Identities=52% Similarity=0.853 Sum_probs=444.9
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
+.||||+|+.... +++++||+||+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4699999998643 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHh
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 215 (533)
+++++|+|||+.+++.|+..+++.++||++.+++..+...+... +...+++++|+|||++|+|||||+.+.+|+++|||
T Consensus 80 ~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apAL 158 (472)
T COG1012 80 ALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPAL 158 (472)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999988776644333 67889999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccc
Q 009516 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (533)
Q Consensus 216 aaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~ 295 (533)
++||+||+|||+.||+++..+++++.++|+|+|++|+|+|.+.+.++.|+.||+|++|+||||+.+|+.|++.+++++||
T Consensus 159 aaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~ 238 (472)
T COG1012 159 AAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKP 238 (472)
T ss_pred HcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999997777999999999999999999999999999999999999
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-CccCCCCCCCcc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGVV 374 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~~~ 374 (533)
+++|||||||+||++|||+|.|++.++.++|.|+||+|++.+|+|||+++||+|+++|.++ ++ +++|||.|++++
T Consensus 239 ---~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~ 314 (472)
T COG1012 239 ---VTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD 314 (472)
T ss_pred ---EEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999 65 999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHH
Q 009516 375 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 454 (533)
Q Consensus 375 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~ 454 (533)
+||+++.++++++.++|++++.+|++++.||... . |+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 315 ~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~-~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lA 392 (472)
T COG1012 315 LGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP-G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELA 392 (472)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC-C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999843 3 8999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 455 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 455 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
|+++|||+++|||+|..++.+++.++++|+||||++.. ....+||||+|.||+|+++|.+++++|++.|+|++..
T Consensus 393 N~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 393 NDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence 99999999999999999999999999999999999853 4467999999999999999999999999999998764
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-106 Score=866.96 Aligned_cols=492 Identities=82% Similarity=1.267 Sum_probs=464.9
Q ss_pred cccccccchhhhccCCccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHH
Q 009516 37 SVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116 (533)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R 116 (533)
.|+.++...+++...+.+.++||+|+|+.+.++++++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R 86 (498)
T PLN02278 7 SMDAQSALVKLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASER 86 (498)
T ss_pred ccccHHHHHHhhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 34444545677777777888999999998656789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEE
Q 009516 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGA 196 (533)
Q Consensus 117 ~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 196 (533)
.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++||++.+++..+...+...++...+++++|+|||++
T Consensus 87 ~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~ 166 (498)
T PLN02278 87 SKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGA 166 (498)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEE
Confidence 99999999999999999999999999999999999999999999999999988776655544445567788999999999
Q ss_pred EcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEee
Q 009516 197 ITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276 (533)
Q Consensus 197 I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ft 276 (533)
|+|||||+.+.++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+|+|++.+.++.|+.||+|++|+||
T Consensus 167 I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fT 246 (498)
T PLN02278 167 ITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFT 246 (498)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999777888999999999999999
Q ss_pred CCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHH
Q 009516 277 GSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356 (533)
Q Consensus 277 Gs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l 356 (533)
||+.+|+.|++.+++++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 247 GS~~~G~~i~~~aa~~~~~---~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L 323 (498)
T PLN02278 247 GSTAVGKKLMAGAAATVKR---VSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAF 323 (498)
T ss_pred CcHHHHHHHHHHHhhcCCc---EEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCccccccccc
Q 009516 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 436 (533)
Q Consensus 357 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FG 436 (533)
+++++++++|+|+++++++||++++.+++++.+++++++++|+++++||...+.+|+|++|||+.+++++|++++||+||
T Consensus 324 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FG 403 (498)
T PLN02278 324 SKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFG 403 (498)
T ss_pred HHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcC
Confidence 99999999999999999999999999999999999999999999999997643357999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHH
Q 009516 437 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 516 (533)
Q Consensus 437 Pv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l 516 (533)
||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+.....+.+||||+|.||+|+++|++|+
T Consensus 404 PVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l 483 (498)
T PLN02278 404 PVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGI 483 (498)
T ss_pred CEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999777667899999999999999999999
Q ss_pred HhhheeeEEEEeccC
Q 009516 517 DEFLEIKYVCLGDMN 531 (533)
Q Consensus 517 ~~~~~~k~v~~~~~~ 531 (533)
++||+.|+|++++|+
T Consensus 484 ~~ft~~k~i~~~~~~ 498 (498)
T PLN02278 484 DEYLEIKYVCLGNMN 498 (498)
T ss_pred HHhheeEEEEEecCC
Confidence 999999999998764
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-106 Score=868.94 Aligned_cols=471 Identities=32% Similarity=0.499 Sum_probs=446.1
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~e 192 (604)
T PLN02419 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDK 192 (604)
T ss_pred ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45679999999875677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||+++++...+...+....+...+++++|+|||++|+|||||+.+.++++++
T Consensus 193 la~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iap 272 (604)
T PLN02419 193 LAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPV 272 (604)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999998877765443333556788999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +.++.|+.|++|++|+||||+.+|+.|++.+++++
T Consensus 273 ALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~l 351 (604)
T PLN02419 273 AVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKG 351 (604)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999964 67899999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|+|++|||||++ +|+|+++|.++++++++|+|.|+++
T Consensus 352 k~---v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t 427 (604)
T PLN02419 352 KR---IQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDA 427 (604)
T ss_pred Cc---EEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCC
Confidence 99 9999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++||++++.+++++.+++++|+++||++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+||
T Consensus 428 ~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dE 507 (604)
T PLN02419 428 DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDE 507 (604)
T ss_pred CccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHH
Confidence 999999999999999999999999999999997531 3579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCC--CCChHHHHHhhheeeEEE
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G--~~gg~~~l~~~~~~k~v~ 526 (533)
||+++|+++|||++||||+|.+++.++++++++|+||||+.... .+.+||||+|.||+| +++|++++++||+.|+|+
T Consensus 508 AI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~ 587 (604)
T PLN02419 508 AISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVT 587 (604)
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999987543 467899999999999 799999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 588 ~~~ 590 (604)
T PLN02419 588 QKQ 590 (604)
T ss_pred Ecc
Confidence 864
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-104 Score=853.76 Aligned_cols=473 Identities=41% Similarity=0.675 Sum_probs=448.5
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
..+.||||+|+.+.++.+++++||+||+++++++.++.+|++.++++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 20 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 99 (501)
T PLN02766 20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHI 99 (501)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 45679999999876678999999999999999999999999999999999998 5999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
++|++++++|+|||+.+++ .|+..+++.++||++.+++..+...+.. .+...+++++|+|||++|+|||||+.+.+++
T Consensus 100 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 178 (501)
T PLN02766 100 EELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMK 178 (501)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHHHHHH
Confidence 9999999999999999997 5999999999999999887766543322 2445678999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 179 ~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 258 (501)
T PLN02766 179 VAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAA 258 (501)
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999977789999999999999999999999999999998
Q ss_pred -cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 291 -GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 291 -~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
+++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 259 ~~~l~~---~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~ 335 (501)
T PLN02766 259 TSNLKQ---VSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPF 335 (501)
T ss_pred hcCCCe---EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 58898 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++++||++++.+++++.++|++++.+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 336 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~de 415 (501)
T PLN02766 336 DPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEE 415 (501)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976434578999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+|+++|+++|||++||||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|++++++||+.|+|++..
T Consensus 416 ai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (501)
T PLN02766 416 AIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPL 495 (501)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999999999987777778999999999999999999999999999998875
Q ss_pred c
Q 009516 530 M 530 (533)
Q Consensus 530 ~ 530 (533)
.
T Consensus 496 ~ 496 (501)
T PLN02766 496 Y 496 (501)
T ss_pred c
Confidence 4
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-104 Score=847.52 Aligned_cols=468 Identities=36% Similarity=0.618 Sum_probs=443.6
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+ ++.+++++||.||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 357999999975 4688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
++++++|+|||+.+++ .|+..+++.++||++.++...+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 9999999999999997 599999999999999887765543332223556789999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 239 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSI 239 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999885 9999999999977788999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++
T Consensus 240 ~~---~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~ 316 (472)
T TIGR03374 240 KR---THMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST 316 (472)
T ss_pred cc---eEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCC-CeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
++||+++..+++++.++|++++++| +++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 396 (472)
T TIGR03374 317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVN 396 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHH
Confidence 9999999999999999999999999 799999976433478999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
++|+++|||++||||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 397 ~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 397 WANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999987777789999999999999999999999999999975
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-103 Score=843.86 Aligned_cols=471 Identities=37% Similarity=0.655 Sum_probs=445.7
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4579999999876678999999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCC--CC-ceeEEEeeeceEEEEEcCCCcchHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATL--PD-RRLFVLKQPVGVAGAITPWNFPLAMIT 208 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~--~~-~~~~~~~~P~GVv~~I~p~N~P~~~~~ 208 (533)
+|++++++|+|||+.+++ .|+..+++.++||+.++++..+...+... ++ ...+.+++|+|||++|+|||||+...+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 999999999999999997 69999999999999998877665443221 22 246789999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999999
Q ss_pred hhc-CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCC
Q 009516 289 AAG-TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367 (533)
Q Consensus 289 ~~~-~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 367 (533)
++. ++|| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 246 aa~~~l~~---v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~ 322 (486)
T cd07140 246 CAVSNLKK---VSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGD 322 (486)
T ss_pred HHhcCCCe---EEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccC
Confidence 986 8898 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeC--
Q 009516 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK-- 445 (533)
Q Consensus 368 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~-- 445 (533)
|+++++++||++++.+++++.++|++|+++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 323 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~ 402 (486)
T cd07140 323 PLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDG 402 (486)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCC
Confidence 999999999999999999999999999999999999997643457999999999999999999999999999999998
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 446 ~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
|++|+|+++|+++|||++||||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|++++++||+.|+|
T Consensus 403 ~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v 482 (486)
T cd07140 403 DVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482 (486)
T ss_pred CHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEE
Confidence 69999999999999999999999999999999999999999999877777899999999999999999999999999999
Q ss_pred EEe
Q 009516 526 CLG 528 (533)
Q Consensus 526 ~~~ 528 (533)
+++
T Consensus 483 ~~~ 485 (486)
T cd07140 483 TIE 485 (486)
T ss_pred EEe
Confidence 874
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-103 Score=848.70 Aligned_cols=471 Identities=43% Similarity=0.683 Sum_probs=447.5
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH--hccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.+.||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+. |+.++.++|.++|+++++.|+++++
T Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 137 (538)
T PLN02466 58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHND 137 (538)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46799999998767899999999999999999999999999999999999984 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.+++ .|+..+++.++||++++++..+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 138 ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i 216 (538)
T PLN02466 138 ELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 216 (538)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHHHH
Confidence 999999999999999996 5999999999999999888776655432 23456889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++.
T Consensus 217 ~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~ 296 (538)
T PLN02466 217 GPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAK 296 (538)
T ss_pred hHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999884
Q ss_pred -CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 292 -TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 292 -~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+|++
T Consensus 297 ~~l~p---v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~ 373 (538)
T PLN02466 297 SNLKP---VTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFK 373 (538)
T ss_pred cCCCc---EEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 8888 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+++++||++++++++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||+
T Consensus 374 ~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deA 453 (538)
T PLN02466 374 KGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEV 453 (538)
T ss_pred CCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999865345789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
|+++|+++|||+++|||+|.+++.++++++++|+||||+....++.+||||+|.||+|+++|++|+++||+.|+|++..
T Consensus 454 i~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 532 (538)
T PLN02466 454 IRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPL 532 (538)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeC
Confidence 9999999999999999999999999999999999999987777778999999999999999999999999999998764
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-103 Score=841.69 Aligned_cols=468 Identities=39% Similarity=0.649 Sum_probs=443.3
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH-hccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
+||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+. |+.++.++|.++|+++++.|++++++|+
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 81 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELA 81 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 589999998766788999999999999999999999999999999999985 9999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCC-----CCceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 136 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATL-----PDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
+++++|+|||+.+++. |+..+++.++|+++++....+...+... .+...+++++|+|||++|+|||||+.+.++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 161 (477)
T cd07113 82 QLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence 9999999999999985 9999999999999988876655432211 124567899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++. .+..|+.||+|++|+||||+.+|+.|++.+
T Consensus 162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 240 (477)
T cd07113 162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQA 240 (477)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765 889999999999999999999999999999
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
++++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 241 a~~~~~---~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 317 (477)
T cd07113 241 ASDLTR---VTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPM 317 (477)
T ss_pred HhhcCc---eEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
|+++++||++++.+++++.+++++|+++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 318 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de 397 (477)
T cd07113 318 DESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397 (477)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976433479999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
||+++|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999998877677899999999999999999999999999999764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-103 Score=840.77 Aligned_cols=468 Identities=31% Similarity=0.510 Sum_probs=441.5
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+ +.+++++||.||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 20 ~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
T PLN02315 20 NLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDY 97 (508)
T ss_pred ccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHH
Confidence 4568999999864 67899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||++.++++.+...+...++...+..++|+|||++|+|||||+.++++++++
T Consensus 98 la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 177 (508)
T PLN02315 98 LGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 177 (508)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhH
Confidence 99999999999999999999999999999999988876665554333455677899999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHH----HHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 214 ALACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~----l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
||++||+||+|||+.+|+++.. +.+++.++|+|+|++|++++ +.+.++.|+.||++++|+||||+.+|+.|++.+
T Consensus 178 ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~a 256 (508)
T PLN02315 178 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTV 256 (508)
T ss_pred HHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999877 67888999999999999998 678899999999999999999999999999999
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
+.+++| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|+|+
T Consensus 257 a~~~~~---~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~ 333 (508)
T PLN02315 257 NARFGK---CLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPL 333 (508)
T ss_pred HhcCCC---EEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 988898 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++++||+++..+.+++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|+||
T Consensus 334 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~de 412 (508)
T PLN02315 334 EKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEE 412 (508)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHH
Confidence 999999999999999999999999999999999999764345799999999 5999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHh--hcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSE--ALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~--~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
||+++|+++|||+++|||+|.++++++++ ++++|+||||+.... .+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 413 ai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~ 492 (508)
T PLN02315 413 AIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEEEE
Confidence 99999999999999999999999999985 799999999986553 467899999999999999999999999999998
Q ss_pred Ee
Q 009516 527 LG 528 (533)
Q Consensus 527 ~~ 528 (533)
++
T Consensus 493 ~~ 494 (508)
T PLN02315 493 IN 494 (508)
T ss_pred Ee
Confidence 75
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-102 Score=837.01 Aligned_cols=469 Identities=42% Similarity=0.706 Sum_probs=445.3
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH--hccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+. |+.++.++|.++|++++++|+++++
T Consensus 4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07142 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 35799999998666789999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||..+++ .|+..+++.++||+.++++..+...+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus 84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 999999999999999997 4999999999999999887766654432 23456789999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.||+++.|+||||+.+|+.|++.+++
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~ 242 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK 242 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777789999999999999999999999999999986
Q ss_pred -CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 292 -TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 292 -~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus 243 ~~~~~---v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 319 (476)
T cd07142 243 SNLKP---VTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFR 319 (476)
T ss_pred cCCCe---EEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8888 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+++++||++++.+++++.+++++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||+
T Consensus 320 ~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ea 399 (476)
T cd07142 320 KGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEV 399 (476)
T ss_pred CCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999765445789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|+++|+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|++
T Consensus 400 i~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 476 (476)
T cd07142 400 IKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476 (476)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEeC
Confidence 99999999999999999999999999999999999999877777789999999999999999999999999999864
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-102 Score=838.15 Aligned_cols=470 Identities=40% Similarity=0.653 Sum_probs=446.2
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++|++++++
T Consensus 6 ~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (488)
T PRK13252 6 LQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDE 85 (488)
T ss_pred cccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45679999999766678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||..+++. |+..+++.++||++.++...+...+.. .+...+.+++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~ 164 (488)
T PRK13252 86 LAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACWKSA 164 (488)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHH
Confidence 999999999999999984 999999999999999877666544322 245678899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++. .++.|+.||+|+.|+||||+.+|+.|.+.++++
T Consensus 165 ~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~ 243 (488)
T PRK13252 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS 243 (488)
T ss_pred HHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999998665 889999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||++++
T Consensus 244 l~~---~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 320 (488)
T PRK13252 244 LKE---VTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPA 320 (488)
T ss_pred CCc---EEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ 448 (533)
+++||++++.+++++++++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ 400 (488)
T PRK13252 321 TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDED 400 (488)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHH
Confidence 9999999999999999999999999999999996432 247999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 449 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 449 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 401 eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 401 EVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999999998766667899999999999999999999999999999875
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-102 Score=833.15 Aligned_cols=468 Identities=39% Similarity=0.654 Sum_probs=444.5
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 46899999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 136 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
+++++|+|||+.+++. |+..+++.++||+..+++..+...+.. .+...+++++|+|||++|+|||||+.++++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999985 999999999999998877665543322 24457889999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.++.|+.|++++.|+||||+.+|+.|++.++++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI 239 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999985 99999999999777889999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcc
Q 009516 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 374 (533)
Q Consensus 295 ~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 374 (533)
| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|++++++
T Consensus 240 ~---~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~ 316 (475)
T cd07117 240 P---ATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQ 316 (475)
T ss_pred c---EEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence 8 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 375 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 375 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.|||
T Consensus 317 ~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ea 396 (475)
T cd07117 317 MGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEV 396 (475)
T ss_pred ccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHH
Confidence 99999999999999999999999999999997642 24789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+++|+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|+||+|+++|++|+++||+.|+|++.
T Consensus 397 i~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 397 IDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred HHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999999999999999776777899999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-102 Score=835.80 Aligned_cols=472 Identities=44% Similarity=0.699 Sum_probs=448.1
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhh-----HHhccCCHHHHHHHHHHHHHHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-----NSWSKLTAAERSKGLRKWYDLLM 128 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~-----~~w~~~~~~~R~~iL~~~a~~l~ 128 (533)
+.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|+++++.|+
T Consensus 7 ~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~ 86 (503)
T PLN02467 7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKIT 86 (503)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHH
Confidence 4568999999987667899999999999999999999999999999999999 89999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCccc-CCC--CCCceeEEEeeeceEEEEEcCCCcchH
Q 009516 129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-PAT--LPDRRLFVLKQPVGVAGAITPWNFPLA 205 (533)
Q Consensus 129 ~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~ 205 (533)
+++++|++++++|+|||+.+++.|+..+++.++||+++++++.+... +.. ..+...+++++|+|||++|+|||||+.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T PLN02467 87 ERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLL 166 (503)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHH
Confidence 99999999999999999999999999999999999999988766532 111 123457889999999999999999999
Q ss_pred HHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHH
Q 009516 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285 (533)
Q Consensus 206 ~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 285 (533)
+.++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+++|++.+.++.|+.|++|+.|+||||+.+|+.|
T Consensus 167 ~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 246 (503)
T PLN02467 167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246 (503)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999777889999999999999999999999999
Q ss_pred HHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc
Q 009516 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 365 (533)
Q Consensus 286 ~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 365 (533)
++.+++++|| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++
T Consensus 247 ~~~aa~~~~~---~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 323 (503)
T PLN02467 247 MTAAAQMVKP---VSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKI 323 (503)
T ss_pred HHHHhccCCc---EEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEe
Q 009516 366 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 443 (533)
Q Consensus 366 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~ 443 (533)
|||+|+++++||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 403 (503)
T PLN02467 324 SDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKT 403 (503)
T ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEe
Confidence 99999999999999999999999999999999999999997642 3578999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheee
Q 009516 444 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523 (533)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k 523 (533)
|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+.......+||||+|.||+|+++|++++++||+.|
T Consensus 404 ~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k 483 (503)
T PLN02467 404 FSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVK 483 (503)
T ss_pred eCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhCeE
Confidence 99999999999999999999999999999999999999999999987766678999999999999999999999999999
Q ss_pred EEEEe
Q 009516 524 YVCLG 528 (533)
Q Consensus 524 ~v~~~ 528 (533)
+|++.
T Consensus 484 ~i~~~ 488 (503)
T PLN02467 484 QVTKY 488 (503)
T ss_pred EEEEe
Confidence 99885
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-102 Score=834.12 Aligned_cols=468 Identities=36% Similarity=0.623 Sum_probs=445.3
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46999999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 136 QLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
+++++|+|||+.+++ .|+..+++.++||++.++...+...+.. .+...+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEID-EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 999999999999997 4999999999999998877655543322 34567889999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~ 239 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLI 239 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999996 99999999999778899999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCcEEEccCC-----CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 295 KVCRVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 295 ~~~~~~lElgG~~~~iV~~dA-----d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
| +++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+
T Consensus 240 p---~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 316 (480)
T cd07559 240 P---VTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPL 316 (480)
T ss_pred c---EEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9 99999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeC
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 445 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~ 445 (533)
|+++++||++++.+++++.+++++|+.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 396 (480)
T cd07559 317 DPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFK 396 (480)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeC
Confidence 9999999999999999999999999999999999997642 357999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 446 ~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
|+||+|+++|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|
T Consensus 397 ~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v 476 (480)
T cd07559 397 DEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNI 476 (480)
T ss_pred CHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999998777677899999999999999999999999999999
Q ss_pred EEe
Q 009516 526 CLG 528 (533)
Q Consensus 526 ~~~ 528 (533)
+++
T Consensus 477 ~~~ 479 (480)
T cd07559 477 LVS 479 (480)
T ss_pred EEe
Confidence 764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-102 Score=831.81 Aligned_cols=468 Identities=38% Similarity=0.614 Sum_probs=442.0
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH-hccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
++||||+|+. ++++++++||+||+++++++.++.+|++.++++|++||+. |+.++..+|.++|++++++|++++++|
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 79 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDF 79 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4699999997 4789999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCC---CCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATL---PDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
++++++|+|||..++.. |+..+++.++||++.++...+...+... .+...+.+++|+|||++|+|||||+.+.+++
T Consensus 80 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~ 159 (481)
T TIGR03216 80 LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWK 159 (481)
T ss_pred HHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHH
Confidence 99999999999999975 9999999999999998776554432211 1345678999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChh-hHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++. ++++.|..||+|+.|+||||+.+|+.|++.+
T Consensus 160 ~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~a 239 (481)
T TIGR03216 160 VGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239 (481)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998654 5888999999999999999999999999999
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
++++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.
T Consensus 240 a~~~~~---~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 240 ADGVKP---VSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred hcCCCe---EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-----CCCceeecEEeccCCCCCcccccccccceEEEEee
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~ 444 (533)
++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999999997532 25799999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeE
Q 009516 445 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524 (533)
Q Consensus 445 ~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~ 524 (533)
+|+||||+++|+++|||++||||+|.+++.++++++++|+||||+.....+.+||||+|+||+|+++|.+++++||+.|+
T Consensus 397 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~ 476 (481)
T TIGR03216 397 DSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTN 476 (481)
T ss_pred CCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999987777789999999999999999999999999999
Q ss_pred EEEe
Q 009516 525 VCLG 528 (533)
Q Consensus 525 v~~~ 528 (533)
|+++
T Consensus 477 v~~~ 480 (481)
T TIGR03216 477 VCIK 480 (481)
T ss_pred EEEe
Confidence 9774
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-101 Score=829.91 Aligned_cols=471 Identities=40% Similarity=0.666 Sum_probs=446.5
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
+.++||||+|+.+ ++++++++||+||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++
T Consensus 2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 80 (475)
T PRK13473 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADE 80 (475)
T ss_pred CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3467999999875 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||..+++. |+..+++.++||+..++.+.+...+....+...+++++|+|||++|+|||||+...+++++
T Consensus 81 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~ 160 (475)
T PRK13473 81 FARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLA 160 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHH
Confidence 999999999999999864 9999999999999988877655333222344578899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++|++.+.+..|+.|++|+.|+||||+++|+.|++.++++
T Consensus 161 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~ 239 (475)
T PRK13473 161 PALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADS 239 (475)
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999 999999999997778999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 240 ~~~---~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~ 316 (475)
T PRK13473 240 VKR---THLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDED 316 (475)
T ss_pred CCc---EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 998 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCC-CeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
+++||++++.+++++.++++++.++| +++++||...+..|+|++|||+.++++++.+++||+||||++|++|+|+||||
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai 396 (475)
T PRK13473 317 TELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAV 396 (475)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHH
Confidence 99999999999999999999999999 99999997653357899999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+++|+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|++++
T Consensus 397 ~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 397 RWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 999999999999999999999999999999999999998777778999999999999999999999999999998764
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-101 Score=828.00 Aligned_cols=469 Identities=35% Similarity=0.531 Sum_probs=443.1
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999987566889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHh
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 215 (533)
+++++|+|||+.+++.|+..+++.++|++...+...+...+...++...+.+++|+|||++|+|||||+...++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 161 (478)
T cd07085 82 RLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAI 161 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887766665544323355678999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccc
Q 009516 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (533)
Q Consensus 216 aaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~ 295 (533)
++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+ .+.++.|+.|++|+.|+||||+.+|+.|++.+++++||
T Consensus 162 aaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07085 162 ACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKR 240 (478)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999984 56789999999999999999999999999999989999
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCccc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 375 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 375 (533)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++
T Consensus 241 ---~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~ 317 (478)
T cd07085 241 ---VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADM 317 (478)
T ss_pred ---EEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 376 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 376 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
||++++.+++++.+++++++++||++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 318 gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai 397 (478)
T cd07085 318 GPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAI 397 (478)
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHH
Confidence 9999999999999999999999999999997532 257899999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCccCcCCCCCC--CCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~-~~~PfGG~~~SG~G--~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||+++|||+|.++++++++++++|+||||++.... +.+||||+|.||+| +++|++++++||+.|+|+++
T Consensus 398 ~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 398 AIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 9999999999999999999999999999999999999875543 57899999999999 57999999999999999865
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-101 Score=828.55 Aligned_cols=470 Identities=43% Similarity=0.678 Sum_probs=445.6
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---HhccCCHHHHHHHHHHHHHHHHHh
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAH 130 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~ 130 (533)
..++||||+|+.+.++.+++++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 6 ~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T cd07141 6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERD 85 (481)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHh
Confidence 35679999999876778999999999999999999999999999999999998 699999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHH-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 131 KEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
.++|++++++|+|||..++ ..|+..+++.++|+++++++..+...+.. .+...+.+++|+|||++|+|||||+...++
T Consensus 86 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 164 (481)
T cd07141 86 RAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAAW 164 (481)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHHHH
Confidence 9999999999999999766 46999999999999999888776544322 234567899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.|++|+.|+||||+.+|+.|++.+
T Consensus 165 ~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 244 (481)
T cd07141 165 KLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAA 244 (481)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997778889999999999999999999999999988
Q ss_pred hc-CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCC
Q 009516 290 AG-TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 368 (533)
Q Consensus 290 ~~-~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 368 (533)
+. ++|| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 245 a~~~~~~---~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 245 GKSNLKR---VTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred hhhcCce---EEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 86 8888 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHH
Q 009516 369 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448 (533)
Q Consensus 369 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ 448 (533)
+|+++++||++++.+++++.+++++|+++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 99999999999999999999999999999999999998754457899999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 449 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 449 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|||+++|+++|||++||||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 9999999999999999999999999999999999999999877777789999999999999999999999999999876
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-101 Score=830.30 Aligned_cols=469 Identities=41% Similarity=0.677 Sum_probs=444.5
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
+.||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~ 81 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA 81 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46899999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHH-HHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK-RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
+++++|+|||+.+++.|+..+++.++|+++.++ ...+...+.. +...+.+++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 159 (488)
T TIGR02299 82 VLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPVD--THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA 159 (488)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccCC--CceEEEEEEecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 3334433322 3456889999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.|++|+.|+||||+.+|+.|++.+++++|
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~ 239 (488)
T TIGR02299 160 LAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLK 239 (488)
T ss_pred HHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999998777888999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcc
Q 009516 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 374 (533)
Q Consensus 295 ~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 374 (533)
| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++++
T Consensus 240 ~---~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~ 316 (488)
T TIGR02299 240 R---FSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316 (488)
T ss_pred e---EEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence 9 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-------CCCceeecEEeccCCCCCcccccccccceEEEEeeCCH
Q 009516 375 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 447 (533)
Q Consensus 375 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-------~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~ 447 (533)
+||++++.+++++.+++++++.+|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 396 (488)
T TIGR02299 317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDE 396 (488)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCH
Confidence 99999999999999999999999999999997632 24789999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 448 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
||||+++|+++|||++||||+|.++++++++++++|+||||+.....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 397 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~ 476 (488)
T TIGR02299 397 EEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL 476 (488)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEE
Confidence 99999999999999999999999999999999999999999877777789999999999999999999999999999987
Q ss_pred ec
Q 009516 528 GD 529 (533)
Q Consensus 528 ~~ 529 (533)
+.
T Consensus 477 ~~ 478 (488)
T TIGR02299 477 AL 478 (488)
T ss_pred ec
Confidence 53
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-101 Score=825.83 Aligned_cols=467 Identities=40% Similarity=0.672 Sum_probs=443.0
Q ss_pred cceecCEEeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
++||+|+|+.+ +..++++||. ||+++++++.++.+|++++++.|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 2 ~~~i~g~~~~~--~~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 79 (473)
T cd07097 2 RNYIDGEWVAG--GDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEEL 79 (473)
T ss_pred CceECCEEecC--CCCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46999999975 3457999999 59999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
++++++|+|||+.+++.|+..+++.++||++..++..+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 80 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~A 159 (473)
T cd07097 80 ARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPA 159 (473)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888776544433345667899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.|++|++|+||||+.+|+.|++.+++++|
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (473)
T cd07097 160 LAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGA 239 (473)
T ss_pred HHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999777889999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcc
Q 009516 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 374 (533)
Q Consensus 295 ~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 374 (533)
| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++++++
T Consensus 240 ~---~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 316 (473)
T cd07097 240 R---VQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVD 316 (473)
T ss_pred c---EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCc
Confidence 9 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 375 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 375 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+||++++.+++++.+++++++++|+++++||...+ ..|+|++|||+.++++++++++||+||||++|++|+|+||+|+
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 396 (473)
T cd07097 317 IGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALA 396 (473)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHH
Confidence 99999999999999999999999999999997643 2478999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCC-CCChHHHHHhhheeeEEEE
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k~v~~ 527 (533)
++|+++|||+++|||+|.+++.++++++++|+||||++.. ..+.+||||+|.||+| +++|++++++||+.|+|++
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~~ 473 (473)
T cd07097 397 IANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVYV 473 (473)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999999999998765 3468999999999999 9999999999999999864
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-101 Score=824.82 Aligned_cols=467 Identities=38% Similarity=0.634 Sum_probs=444.3
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (533)
+||||+|+.+. +.+++++||+||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999864 68899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhh
Q 009516 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (533)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 216 (533)
++++|+|||+.+++.|+..+++.++|+++..+++.+...+...++...+.+++|+|||++|+|||||+.++++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALa 159 (478)
T cd07086 80 LVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALV 159 (478)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877665544334556788999999999999999999999999999999
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHc----CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||+||+|||+.+|+++..++++++++ |+|+|++|++++++. .++.|..||+++.|+||||+.+|+.|++.++++
T Consensus 160 aGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~ 238 (478)
T cd07086 160 CGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVARR 238 (478)
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999999 999999999998654 889999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+++ +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 239 ~~~---~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 315 (478)
T cd07086 239 FGR---VLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEG 315 (478)
T ss_pred CCc---EEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCC
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC--CCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+++||++++.+++++.+++++|+++|+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 316 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~dea 395 (478)
T cd07086 316 TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEA 395 (478)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999976532 4789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhh--cceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~--l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|+++|+++|||+++|||+|.+++++++++ +++|+||||++... .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 396 i~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~ 475 (478)
T cd07086 396 IAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTI 475 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999 99999999987654 4678999999999999999999999999999987
Q ss_pred e
Q 009516 528 G 528 (533)
Q Consensus 528 ~ 528 (533)
+
T Consensus 476 ~ 476 (478)
T cd07086 476 N 476 (478)
T ss_pred e
Confidence 5
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-101 Score=824.90 Aligned_cols=466 Identities=35% Similarity=0.592 Sum_probs=438.9
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLA 81 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46999999987678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 136 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
.++++|+|||+.+++. |+..+++.++||++..++..+...+. .++...+.+++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 160 (479)
T cd07116 82 VAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPA 160 (479)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999974 99999999999999887765544332 234457889999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+.+..|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~ 239 (479)
T cd07116 161 LAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENII 239 (479)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999998 99999999998777889999999999999999999999999999999998
Q ss_pred ccceeeecCCCCCcEEEccC------CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCC
Q 009516 295 KVCRVSLELGGNAPCIVFDD------ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 368 (533)
Q Consensus 295 ~~~~~~lElgG~~~~iV~~d------Ad~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 368 (533)
| +++|||||||+||++| ||+|.|++.++++. +|+||.|++++|||||++++|+|+++|.++++++++|+|
T Consensus 240 p---~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p 315 (479)
T cd07116 240 P---VTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNP 315 (479)
T ss_pred e---EEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 8 9999999999999998 79999999999865 599999999999999999999999999999999999999
Q ss_pred CCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEee
Q 009516 369 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444 (533)
Q Consensus 369 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~ 444 (533)
+++++++||++++.+++++++++++++.+|+++++||.... .+|+|++|||+.+++ +|++++||+||||++|++|
T Consensus 316 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~ 394 (479)
T cd07116 316 LDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTF 394 (479)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEe
Confidence 99999999999999999999999999999999999997642 247899999999874 9999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeE
Q 009516 445 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524 (533)
Q Consensus 445 ~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~ 524 (533)
+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+
T Consensus 395 ~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~ 474 (479)
T cd07116 395 KDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKN 474 (479)
T ss_pred CCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999999877777789999999999999999999999999999
Q ss_pred EEEe
Q 009516 525 VCLG 528 (533)
Q Consensus 525 v~~~ 528 (533)
|+++
T Consensus 475 ~~~~ 478 (479)
T cd07116 475 LLVS 478 (479)
T ss_pred EEEe
Confidence 9763
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-101 Score=821.88 Aligned_cols=470 Identities=42% Similarity=0.698 Sum_probs=444.6
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-Hhc-cCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWS-KLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-~w~-~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.+.||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+ .|+ .++.++|.++|+++++.|+++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999999876678899999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHH-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||..++ ..|+..+++.++|+++++++..+...+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999765 56999999999999999987766544332 34567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|++.+++
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999998884
Q ss_pred -CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 292 -TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 292 -~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
.+|| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|++
T Consensus 246 ~~~~~---~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 322 (481)
T cd07143 246 SNLKK---VTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFA 322 (481)
T ss_pred hcCCE---EEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCC
Confidence 7888 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+++++||++++.+++++.+++++++.+|+++++||......|+|++|||+.++++++++++||+||||++|++|+|.|||
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 402 (481)
T cd07143 323 EDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEA 402 (481)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999875345789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+++|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 403 i~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 403 IKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999999999999999877777899999999999999999999999999999864
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-101 Score=821.59 Aligned_cols=465 Identities=35% Similarity=0.600 Sum_probs=436.9
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (533)
.+|||+|+.+ +++++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 78 (474)
T cd07130 1 GVYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGK 78 (474)
T ss_pred CeECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999984 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhh
Q 009516 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (533)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 216 (533)
++++|+|||+.+++.|+..+++.++|+++..+.+.+...+...++...+..++|+|||++|+|||||+.++++++++||+
T Consensus 79 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 158 (474)
T cd07130 79 LVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALV 158 (474)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHH
Confidence 99999999999999999999999999998887766654444334556788899999999999999999999999999999
Q ss_pred cCCEEEEecCCCchHHHHHHHHH----HHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 217 CGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~l----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||+||+|||+.+|+++..++++ +.++|+|+|++|+++|+ .+.++.|++|++|++|+||||+.+|+.|++.++++
T Consensus 159 aGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~ 237 (474)
T cd07130 159 CGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAAR 237 (474)
T ss_pred cCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhc
Confidence 99999999999999999887766 46999999999999985 46789999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
++| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++++
T Consensus 238 ~~~---~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 238 FGR---SLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred CCC---EEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence 998 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||++++.+++++.+++++|+++|+++++||...+.+|+|++|||+.++++ |++++||+||||++|++|+|+||||+
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~ 393 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIA 393 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999986433578999999998766 99999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhh--cceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~--l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++|+++|||+++|||+|.+++++++++ +++|+||||.... ..+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 394 ~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 394 WNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence 999999999999999999999999987 9999999998654 346799999999999999999999999999998875
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-100 Score=816.29 Aligned_cols=456 Identities=35% Similarity=0.540 Sum_probs=431.9
Q ss_pred CCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 009516 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 148 (533)
Q Consensus 69 ~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 148 (533)
.++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||+.+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCC
Q 009516 149 AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228 (533)
Q Consensus 149 a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~ 228 (533)
++.|+..+++.++||+..+++..+... ...++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~ 164 (462)
T PRK13968 86 ARAEVAKSANLCDWYAEHGPAMLKAEP-TLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN 164 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999999998876644321 1223556789999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCc
Q 009516 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAP 308 (533)
Q Consensus 229 tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~ 308 (533)
+|+++..+.+++.++|+|+|++|+|++++.+ +..|+.||++++|+||||+++|+.|++.+++++|| +++|+|||||
T Consensus 165 tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~---~~lElGGk~p 240 (462)
T PRK13968 165 VMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKK---CVLELGGSDP 240 (462)
T ss_pred ChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCc---EEEecCCCCc
Confidence 9999999999999999999999999986544 45689999999999999999999999999999999 9999999999
Q ss_pred EEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHH
Q 009516 309 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 388 (533)
Q Consensus 309 ~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~ 388 (533)
+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++..+++++.
T Consensus 241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~ 320 (462)
T PRK13968 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELH 320 (462)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 389 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 389 ~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
+++++++.+|+++++||......|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 321 ~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~ 400 (462)
T PRK13968 321 HQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTT 400 (462)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcC
Confidence 99999999999999999764334789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|++++++||+.|+|++..
T Consensus 401 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 461 (462)
T PRK13968 401 DETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461 (462)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence 9999999999999999999988766778999999999999999999999999999998764
|
|
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-100 Score=825.79 Aligned_cols=476 Identities=26% Similarity=0.398 Sum_probs=442.5
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHH-H
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM-A 129 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~-~ 129 (533)
....++||+|+|+.+ ++.+++++||.| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+ +
T Consensus 29 ~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~ 107 (533)
T TIGR01236 29 PIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGP 107 (533)
T ss_pred CeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhh
Confidence 356778999999974 467899999997 8999999999999999999999999999999999999999999999999 5
Q ss_pred hHHHHHHHHHHHcCCCHHHHhHH-HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeec-eEEEEEcCCCcchHHH
Q 009516 130 HKEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMI 207 (533)
Q Consensus 130 ~~~~la~~~~~e~Gk~~~~a~~E-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~~ 207 (533)
++++|++++++|+|||+.+++.| +..+++.++|++.++++..+...+...++..+++.++|+ |||++|+|||||+...
T Consensus 108 ~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~ 187 (533)
T TIGR01236 108 YREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAG 187 (533)
T ss_pred cHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHH
Confidence 99999999999999999999886 999999999999998877655332222356688999999 9999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHH
Q 009516 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287 (533)
Q Consensus 208 ~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 287 (533)
.+++++|| +||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++
T Consensus 188 ~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~ 266 (533)
T TIGR01236 188 NLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWK 266 (533)
T ss_pred HHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 89999999999999999999999999999999999999977789999999999999999999999999999
Q ss_pred HhhcCcccc---ceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCc
Q 009516 288 GAAGTVKKV---CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 364 (533)
Q Consensus 288 ~~~~~~k~~---~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 364 (533)
.++++++|. .++++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 267 ~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 346 (533)
T TIGR01236 267 WVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVK 346 (533)
T ss_pred HHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCC
Confidence 999888631 23999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCC--CeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEE
Q 009516 365 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG--AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 442 (533)
Q Consensus 365 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G--a~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~ 442 (533)
+|+|.|+++++||++++.+++++.+++++++++| +++++||......|+|++|||+.+++++|++++||+||||++|+
T Consensus 347 ~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~ 426 (533)
T TIGR01236 347 VGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVY 426 (533)
T ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEE
Confidence 9999999999999999999999999999999987 79999997643357999999999999999999999999999999
Q ss_pred eeCC--HHHHHHHH-HcCCCCcEEEEEcCCHHHHHHHHhhcc--eeEEEECCCCCCC--CCCCccCcCCCCCC-CCChHH
Q 009516 443 CFKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKY 514 (533)
Q Consensus 443 ~~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~V~iN~~~~~~--~~~PfGG~~~SG~G-~~gg~~ 514 (533)
+|+| +||+|+++ |+++|||+++|||+|.+++.+++++++ +|+||||...... +.+||||+|.||+| +++|++
T Consensus 427 ~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~ 506 (533)
T TIGR01236 427 VYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPL 506 (533)
T ss_pred EeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHH
Confidence 9998 49999999 889999999999999999999999977 9999999866533 57899999999998 999999
Q ss_pred HHHhhheeeEEEEec
Q 009516 515 GMDEFLEIKYVCLGD 529 (533)
Q Consensus 515 ~l~~~~~~k~v~~~~ 529 (533)
++++|++.|+|+...
T Consensus 507 ~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 507 NLLRWTSARSIKETF 521 (533)
T ss_pred HHHHhcceEEEEEEc
Confidence 999999999998753
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-100 Score=820.49 Aligned_cols=470 Identities=43% Similarity=0.714 Sum_probs=444.9
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH-hccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++.++++|++|++. |+.++.++|.++|+++++.|++++++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 87 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDL 87 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35799999998655788999999999999999999999999999999999996 88999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHH-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||..++ ..|+..+++.++|+++++++..+...+.. ++...+..++|+|||++|+|||||+...+++++
T Consensus 88 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 166 (484)
T cd07144 88 LAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLA 166 (484)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHHHHHHH
Confidence 9999999999999765 67999999999999999888766544332 345578899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.+.++.|+.||++++|+||||+.+|+.|++.++++
T Consensus 167 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~ 246 (484)
T cd07144 167 PALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQN 246 (484)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997778999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-CccCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGE 371 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~ 371 (533)
+|| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|+++
T Consensus 247 ~~~---~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~ 323 (484)
T cd07144 247 LKA---VTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDD 323 (484)
T ss_pred CCe---EEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCC
Confidence 998 9999999999999999999999999999999999999999999999999999999999999985 999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ 448 (533)
++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 324 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 403 (484)
T cd07144 324 DTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYE 403 (484)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHH
Confidence 99999999999999999999999999999999997643 257899999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 449 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 449 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 404 eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 404 EAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999999877677899999999999999999999999999999874
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-100 Score=819.21 Aligned_cols=467 Identities=46% Similarity=0.765 Sum_probs=446.4
Q ss_pred eecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009516 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL 137 (533)
Q Consensus 58 ~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 137 (533)
||||+|+.+.++++++++||.||+++++++.++.+|++.+++.|++|++.|+.++.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999997666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhc
Q 009516 138 ITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 217 (533)
Q Consensus 138 ~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaa 217 (533)
+++|+|||..+++.|+..+++.++|++.++++..+...+...++...+.+++|+|||++|+|||||+...++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999888766655544446677899999999999999999999999999999999
Q ss_pred CCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccc
Q 009516 218 GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVC 297 (533)
Q Consensus 218 GN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~ 297 (533)
||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.|+++++|+||||+.+|+.|++.+++++||
T Consensus 161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~-- 238 (468)
T cd07088 161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITK-- 238 (468)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc--
Confidence 999999999999999999999999999999999999997777889999999999999999999999999999999999
Q ss_pred eeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCc
Q 009516 298 RVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 377 (533)
Q Consensus 298 ~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 377 (533)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||
T Consensus 239 -~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 317 (468)
T cd07088 239 -VSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGP 317 (468)
T ss_pred -EEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHc
Q 009516 378 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 456 (533)
Q Consensus 378 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~ 456 (533)
++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+
T Consensus 318 li~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 397 (468)
T cd07088 318 LVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAND 397 (468)
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhC
Confidence 99999999999999999999999999997653 35799999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 457 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 457 ~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
++|||+++|||+|.++++++++++++|+||||++....+..||||+|.||+|+++|++++++||+.|+|++
T Consensus 398 ~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~~ 468 (468)
T cd07088 398 SEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVYL 468 (468)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999987766667999999999999999999999999999863
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-100 Score=824.55 Aligned_cols=474 Identities=26% Similarity=0.407 Sum_probs=438.9
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHH-h
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA-H 130 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~-~ 130 (533)
....+||+|+|+.+ +.+++++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++ +
T Consensus 31 ~~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (522)
T cd07123 31 VEIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKY 108 (522)
T ss_pred cccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhC
Confidence 34678999999974 67899999995 99999999999999999999999999999999999999999999999996 8
Q ss_pred HHHHHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeec-eEEEEEcCCCcchHHHH
Q 009516 131 KEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMIT 208 (533)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~~~ 208 (533)
+++|++++++|+|||+.++.. |+..+++.++||+.++.+..+...+...++...+++++|+ |||++|+|||||+....
T Consensus 109 ~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~ 188 (522)
T cd07123 109 RYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGN 188 (522)
T ss_pred HHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHH
Confidence 999999999999999999865 8899999999999988877655433222255678999998 99999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
+++++|| +||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.|++|++|+||||+.+|+.|++.
T Consensus 189 ~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~ 267 (522)
T cd07123 189 LAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQ 267 (522)
T ss_pred HHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 699999999999999999999999999999999999999777899999999999999999999999999999
Q ss_pred hhcCccc---cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc
Q 009516 289 AAGTVKK---VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 365 (533)
Q Consensus 289 ~~~~~k~---~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 365 (533)
+++++++ ..|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 268 aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 347 (522)
T cd07123 268 IGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKM 347 (522)
T ss_pred HHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCcc
Confidence 9988871 1139999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCcccCHHHHHHHHHHHHHHHHC-CCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEee
Q 009516 366 GDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444 (533)
Q Consensus 366 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~ 444 (533)
|+|+|+++++||++++.+++++.+++++++++ |+++++||......|+|++|||+.+++++|++++||+||||++|++|
T Consensus 348 G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 427 (522)
T cd07123 348 GDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVY 427 (522)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEe
Confidence 99999999999999999999999999999999 99999999764335799999999999999999999999999999999
Q ss_pred CC--HHHHHHHHHcCC-CCcEEEEEcCCHHHHHHHHhhc--ceeEEEECCCCCC--CCCCCccCcCCCCCC-CCChHHHH
Q 009516 445 KT--EEEAIHMANDTN-AGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGM 516 (533)
Q Consensus 445 ~~--~~eai~~~n~~~-~gL~a~v~s~d~~~~~~~a~~l--~~G~V~iN~~~~~--~~~~PfGG~~~SG~G-~~gg~~~l 516 (533)
+| +||+|+++|++. |||++||||+|.+++.++++++ ++|+||||+.... .+.+||||+|.||+| +++|++++
T Consensus 428 ~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l 507 (522)
T cd07123 428 PDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNL 507 (522)
T ss_pred CCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHH
Confidence 95 799999999985 9999999999999999999996 5999999987653 357899999999996 99999999
Q ss_pred HhhheeeEEEEec
Q 009516 517 DEFLEIKYVCLGD 529 (533)
Q Consensus 517 ~~~~~~k~v~~~~ 529 (533)
++||+.|+|+...
T Consensus 508 ~~~~~~k~~~~~~ 520 (522)
T cd07123 508 LRWVSPRTIKETF 520 (522)
T ss_pred HHhcceEEEEEec
Confidence 9999999997653
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-100 Score=814.02 Aligned_cols=453 Identities=37% Similarity=0.561 Sum_probs=430.0
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH
Q 009516 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (533)
Q Consensus 72 ~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (533)
++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCc
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~t 229 (533)
|+..+++.++||++.+++..+..... ...+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 99999999999999988775443211 1123467889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcE
Q 009516 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPC 309 (533)
Q Consensus 230 p~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~ 309 (533)
|+++..+.+++.++|+|+|++|+|++ +.+.+..|+.|+++++|+||||+.+|+.|++.+++++|| +++|+|||||+
T Consensus 163 p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~---~~lElGG~~~~ 238 (457)
T PRK09406 163 PQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKK---TVLELGGSDPF 238 (457)
T ss_pred cHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCc---eeeecCCCCee
Confidence 99999999999999999999999976 345678899999999999999999999999999999999 99999999999
Q ss_pred EEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHH
Q 009516 310 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 389 (533)
Q Consensus 310 iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~ 389 (533)
||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|+++++++||++++.+++++.+
T Consensus 239 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~ 318 (457)
T PRK09406 239 IVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEK 318 (457)
T ss_pred EECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCC
Q 009516 390 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 469 (533)
Q Consensus 390 ~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 469 (533)
++++++++|+++++||...+..|+|++|||+.+++++|.+++||+||||++|++|+|+||+|+++|+++|||+++|||+|
T Consensus 319 ~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 398 (457)
T PRK09406 319 QVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRD 398 (457)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999999999997754457999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 470 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 470 ~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
.+++.++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 399 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 457 (457)
T PRK09406 399 EAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWIG 457 (457)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEeC
Confidence 99999999999999999999877778899999999999999999999999999999763
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-100 Score=817.88 Aligned_cols=462 Identities=44% Similarity=0.723 Sum_probs=440.4
Q ss_pred eecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009516 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL 137 (533)
Q Consensus 58 ~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 137 (533)
||+|+|+.+.++++++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999998766789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCHHHH-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhh
Q 009516 138 ITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (533)
Q Consensus 138 ~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 216 (533)
+++|+|||+.++ ..|+..+++.++|+++.+++..+...+...+ ...+..++|+|||++|+|||||+...++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIP-SFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCC-ceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 6799999999999999988766654433222 45688999999999999999999999999999999
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcccc
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~ 296 (533)
+||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.|++|++|+||||+.+|+.|++.+++++||
T Consensus 160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~- 238 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKH- 238 (467)
T ss_pred cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc-
Confidence 9999999999999999999999999999999999999987678999999999999999999999999999999999999
Q ss_pred ceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccC
Q 009516 297 CRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 376 (533)
Q Consensus 297 ~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 376 (533)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|
T Consensus 239 --~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (467)
T TIGR01804 239 --VTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMG 316 (467)
T ss_pred --EEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 377 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 377 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
|++++.+.+++.+++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 317 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~ 396 (467)
T TIGR01804 317 PLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIA 396 (467)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHH
Confidence 999999999999999999999999999997643 2478999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheee
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k 523 (533)
++|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|
T Consensus 397 ~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 397 RANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99999999999999999999999999999999999998777778999999999999999999999999876
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-100 Score=820.21 Aligned_cols=468 Identities=43% Similarity=0.681 Sum_probs=445.6
Q ss_pred eecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 58 ~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
||||+|+.+.++.+++++||.||+++++++.++.+|++.+++.|++||+ .|+.++..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999765678899999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHh
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 215 (533)
+++++|+|||..+++.|+..+++.++|++++.++..+...+.. ++...+++++|+|||++|+|||||+...++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887665544332 355678999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccc
Q 009516 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (533)
Q Consensus 216 aaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~ 295 (533)
++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.||++++|+||||+.+|+.|++.+++++||
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 239 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK 239 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999987777899999999999999999999999999999999999
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCccc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 375 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 375 (533)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++
T Consensus 240 ---~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~ 316 (482)
T cd07119 240 ---VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEM 316 (482)
T ss_pred ---EEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 376 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 376 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 317 gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai 396 (482)
T cd07119 317 GPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAI 396 (482)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHH
Confidence 9999999999999999999999999999997542 247999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 397 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 397 RLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 999999999999999999999999999999999999987666778999999999999999999999999999998865
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-100 Score=814.97 Aligned_cols=462 Identities=39% Similarity=0.660 Sum_probs=439.9
Q ss_pred CEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 009516 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITL 140 (533)
Q Consensus 61 G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 140 (533)
|+|+.+.++.+++++||+||+++++++.++.+|++++++.|++|++.|+.++..+|.++|++++++|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67887655778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCE
Q 009516 141 EQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCT 220 (533)
Q Consensus 141 e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~ 220 (533)
|+|||+.++..|+..+++.++|++....+..+...+...++...+.+++|+|||++|+|||||+.+.++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999998877766555443346677889999999999999999999999999999999999
Q ss_pred EEEecCCCchHHH-HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcccccee
Q 009516 221 VVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRV 299 (533)
Q Consensus 221 VVlKps~~tp~~~-~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~ 299 (533)
||+|||+.+|+++ ..+.+++.++|+|+|++|+|+|++.+++..|+.||.+++|.||||+.+|+.|++.+++++|| +
T Consensus 161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~---~ 237 (465)
T cd07151 161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKK---V 237 (465)
T ss_pred EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCc---E
Confidence 9999999999996 68999999999999999999987778899999999999999999999999999999999999 9
Q ss_pred eecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCccc
Q 009516 300 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI 379 (533)
Q Consensus 300 ~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli 379 (533)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++
T Consensus 238 ~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli 317 (465)
T cd07151 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLI 317 (465)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCC
Q 009516 380 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA 459 (533)
Q Consensus 380 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~ 459 (533)
++.+++++.+++++++.+|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|
T Consensus 318 ~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 394 (465)
T cd07151 318 NESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEY 394 (465)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCc
Confidence 9999999999999999999999999965 3689999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 460 GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 460 gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
||+++|||+|.+++.++++++++|+|+||+.... .+.+||||+|.||+|+++|+++|++||+.|+|++.
T Consensus 395 gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 395 GLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred cceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 9999999999999999999999999999987764 36799999999999999999999999999999874
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-100 Score=817.45 Aligned_cols=469 Identities=44% Similarity=0.715 Sum_probs=444.3
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHh--ccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW--SKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w--~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.++||||+|+.+.++..++++||.||+++++++.++.+|++.+++.|++|++.| +.++.++|.++|+++++.|+++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 467999999976667899999999999999999999999999999999999985 499999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHH-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||..++ ..|+..+++.++|+++++++..+...+.. .+...+.+++|+|||++|+|||||+..+++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 99999999999999655 46999999999999998877766544432 35667899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+|++++.++++.|+.|+++++|+||||+.+|+.|++.++.
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~ 242 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK 242 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999987
Q ss_pred -CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 292 -TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 292 -~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|++
T Consensus 243 ~~~~~---~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~ 319 (476)
T cd07091 243 SNLKK---VTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFD 319 (476)
T ss_pred cCCce---EEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 8888 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+++++||++++.+++++.+++++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 320 ~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 399 (476)
T cd07091 320 PDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEV 399 (476)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHH
Confidence 99999999999999999999999999999999999875445789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|+++|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|+||+|+++|++|+++||+.|+|++
T Consensus 400 i~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 476 (476)
T cd07091 400 IERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476 (476)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999999977777789999999999999999999999999999864
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-100 Score=817.12 Aligned_cols=471 Identities=37% Similarity=0.616 Sum_probs=445.7
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHH
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMA 129 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~ 129 (533)
+++.++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 96 (494)
T PRK09847 17 AIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEA 96 (494)
T ss_pred ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHH
Confidence 3456789999999876678999999999999999999999999999999999997 59999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHH
Q 009516 130 HKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (533)
Q Consensus 130 ~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 208 (533)
++++|++++++|+|||+.++. .|+..+++.++||++.+++..+...+.. .+...+++++|+|||++|+|||||+..++
T Consensus 97 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (494)
T PRK09847 97 HAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTC 175 (494)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHHHH
Confidence 999999999999999999875 5999999999999999988777654432 34456889999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.|++++.|+||||+.+|+.|++.
T Consensus 176 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~ 255 (494)
T PRK09847 176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD 255 (494)
T ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999999
Q ss_pred hh-cCccccceeeecCCCCCcEEEccCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccC
Q 009516 289 AA-GTVKKVCRVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 289 ~~-~~~k~~~~~~lElgG~~~~iV~~dA-d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 366 (533)
++ .++|| +++|+|||||+||++|+ |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 256 aa~~~~~~---~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 332 (494)
T PRK09847 256 AGDSNMKR---VWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPG 332 (494)
T ss_pred hhhhCCCe---EEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 88 57888 99999999999999997 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
+|.++++++||++++.+++++.+++++++++| ++++||... ..+.|++|||+.+++++|++++||+||||++|++|+|
T Consensus 333 ~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 410 (494)
T PRK09847 333 HPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTS 410 (494)
T ss_pred CCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCC
Confidence 99999999999999999999999999999999 999998764 3468999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+||||+++|+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 411 ~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 490 (494)
T PRK09847 411 EEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIW 490 (494)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998777778999999999999999999999999999998
Q ss_pred Ee
Q 009516 527 LG 528 (533)
Q Consensus 527 ~~ 528 (533)
+.
T Consensus 491 ~~ 492 (494)
T PRK09847 491 IS 492 (494)
T ss_pred Ee
Confidence 64
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-100 Score=812.78 Aligned_cols=447 Identities=65% Similarity=1.066 Sum_probs=428.6
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (533)
++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHH
Q 009516 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (533)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~ 233 (533)
..+++.++|++...++..+...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999999988887766554444456677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceecccCC-hhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEc
Q 009516 234 LAAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312 (533)
Q Consensus 234 ~~l~~ll~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~ 312 (533)
..+++++.++|+|+|++|+++++ +.+.++.|+.||++++|+||||+.+|+.|++.++.++|| +++|+|||||+||+
T Consensus 161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~---~~lElGGk~~~iV~ 237 (448)
T TIGR01780 161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKK---VSMELGGNAPFIVF 237 (448)
T ss_pred HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc---eEeecCCCCeeEEC
Confidence 99999999999999999999987 678889999999999999999999999999999999999 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 009516 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392 (533)
Q Consensus 313 ~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 392 (533)
+|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.++++
T Consensus 238 ~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~ 317 (448)
T TIGR01780 238 DDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIA 317 (448)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHH
Q 009516 393 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472 (533)
Q Consensus 393 ~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 472 (533)
+++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||++||||+|.++
T Consensus 318 ~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~ 397 (448)
T TIGR01780 318 DAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLAT 397 (448)
T ss_pred HHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHH
Confidence 99999999999997653457899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheee
Q 009516 473 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523 (533)
Q Consensus 473 ~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k 523 (533)
++++++++++|+||||++...++.+||||+|.||+|+++|.+++++||+.|
T Consensus 398 ~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 398 IWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 999999999999999998777778999999999999999999999999976
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-99 Score=819.88 Aligned_cols=468 Identities=35% Similarity=0.566 Sum_probs=443.6
Q ss_pred cccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
..+.||||+|+.+ +.+++++||+| |+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|+++++
T Consensus 32 ~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 109 (512)
T cd07124 32 EYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRF 109 (512)
T ss_pred ccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 4568999999974 67899999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
+|++++++|+|||+.+++.|+..+++.++||++.+++..+...+.. .+...+++++|+|||++|+|||||+.+.+++++
T Consensus 110 ~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~ 188 (512)
T cd07124 110 ELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEMV-PGEDNRYVYRPLGVGAVISPWNFPLAILAGMTT 188 (512)
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999988755544332 356788999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc-
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG- 291 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~- 291 (533)
+||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|++.+++
T Consensus 189 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~ 268 (512)
T cd07124 189 AALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKV 268 (512)
T ss_pred HHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999777889999999999999999999999999999886
Q ss_pred -----CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccC
Q 009516 292 -----TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 292 -----~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 366 (533)
++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 269 ~~~~~~l~~---~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g 345 (512)
T cd07124 269 QPGQKWLKR---VIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVG 345 (512)
T ss_pred cccccCCCc---EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCC
Confidence 5888 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC--CCceeecEEeccCCCCCcccccccccceEEEEee
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~ 444 (533)
+|.|+++++||++++.+++++.+++++++. |+++++||..... +|+|++|||+.+++++|++++||+||||++|++|
T Consensus 346 ~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 424 (512)
T cd07124 346 DPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKA 424 (512)
T ss_pred CCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEec
Confidence 999999999999999999999999999988 9999999976532 5799999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCcCCCCCC-CCChHHHHHhhhe
Q 009516 445 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLE 521 (533)
Q Consensus 445 ~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~--~~~~PfGG~~~SG~G-~~gg~~~l~~~~~ 521 (533)
+|+||+|+++|+++|||+++|||+|.+++.++++++++|+||||+.... .+.+||||+|+||+| +++|++++++||+
T Consensus 425 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~ 504 (512)
T cd07124 425 KDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQ 504 (512)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999987653 356899999999999 8899999999999
Q ss_pred eeEEEEe
Q 009516 522 IKYVCLG 528 (533)
Q Consensus 522 ~k~v~~~ 528 (533)
.|+|+++
T Consensus 505 ~k~v~~~ 511 (512)
T cd07124 505 PKTVTEN 511 (512)
T ss_pred EEEEEEe
Confidence 9999876
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-99 Score=817.77 Aligned_cols=470 Identities=31% Similarity=0.515 Sum_probs=441.6
Q ss_pred cccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
..++||||+|+.+ +.+++++||+| |+++++++.++.+|++.+++.|++|++.|+.++.++|.++|+++++.|+++++
T Consensus 32 ~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 109 (511)
T TIGR01237 32 TYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRH 109 (511)
T ss_pred ccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 4567999999974 56799999994 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
+|++++++|+|||+.++..|+..+++.++||++.+++..+...+...++...+++++|+|||++|+|||||+..++++++
T Consensus 110 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~ 189 (511)
T TIGR01237 110 ELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTV 189 (511)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999887664433333456778999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh--
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-- 290 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~-- 290 (533)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.||++++|.||||+.+|+.|++.++
T Consensus 190 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~ 269 (511)
T TIGR01237 190 APIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKV 269 (511)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999977789999999999999999999999999999887
Q ss_pred ----cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccC
Q 009516 291 ----GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 291 ----~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 366 (533)
+++|| +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|
T Consensus 270 ~~~~~~~~~---~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g 346 (511)
T TIGR01237 270 QPGQKHLKR---VIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVG 346 (511)
T ss_pred cccccccce---eEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCC
Confidence 46777 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
+|.++++++||++++.+++++.+++++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 347 ~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~ 425 (511)
T TIGR01237 347 PTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD 425 (511)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence 99999999999999999999999999999988 89999865433579999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCcCCCCCCC-CChHHHHHhhheee
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIK 523 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~--~~~~PfGG~~~SG~G~-~gg~~~l~~~~~~k 523 (533)
+||+|+++|+++|||+++|||+|.+++.++++++++|+||||+.... .+.+||||+|.||+|+ ++|++++++||+.|
T Consensus 426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k 505 (511)
T TIGR01237 426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPK 505 (511)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceE
Confidence 99999999999999999999999999999999999999999987653 3468999999999995 79999999999999
Q ss_pred EEEEec
Q 009516 524 YVCLGD 529 (533)
Q Consensus 524 ~v~~~~ 529 (533)
+|+.++
T Consensus 506 ~v~~~~ 511 (511)
T TIGR01237 506 TVTENI 511 (511)
T ss_pred EEEEeC
Confidence 998753
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-99 Score=813.72 Aligned_cols=469 Identities=43% Similarity=0.735 Sum_probs=445.3
Q ss_pred ceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
+||||+|+.+.++++++++||+| ++++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999765678999999999 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHh
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 215 (533)
+++++|+|||+.+++.|+..+++.++|+++..+...+...+...++...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998877665544333345678999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccc
Q 009516 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (533)
Q Consensus 216 aaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~ 295 (533)
++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+|++|+||||+.+|+.|++.+++++||
T Consensus 161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR 240 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999997777899999999999999999999999999999999999
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCccc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 375 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 375 (533)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++
T Consensus 241 ---~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~ 317 (478)
T cd07131 241 ---VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDM 317 (478)
T ss_pred ---EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 376 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 376 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
||++++.+++++.+++++|+.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||+|
T Consensus 318 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai 397 (478)
T cd07131 318 GPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAI 397 (478)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHH
Confidence 9999999999999999999999999999997642 247899999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||+++|||+|.+++.++++++++|+||||+.... .+.+||||+|+||+| +++|.+++++||+.|+|+++
T Consensus 398 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 398 EIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred HHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 999999999999999999999999999999999999987764 468999999999999 88999999999999999875
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-99 Score=808.93 Aligned_cols=468 Identities=32% Similarity=0.495 Sum_probs=442.2
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
++||+|+|+.+.+++.++++||.||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999976667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHh
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 215 (533)
+++++|+|||+.+++.|+..+++.++|++.......+...+...++...+.+++|+|||++|+|||||+.+.+|++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888877665544333355677899999999999999999999999999999
Q ss_pred hcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccc
Q 009516 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (533)
Q Consensus 216 aaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~ 295 (533)
++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|+ .+.++.|+.||+|+.|+||||+.+|+.|.+.++.++||
T Consensus 162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~-~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~ 240 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGD-KEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKR 240 (477)
T ss_pred hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCC-HHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCe
Confidence 99999999999999999999999999999999999999984 56688999999999999999999999999999889998
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCccc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 375 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 375 (533)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.++++++
T Consensus 241 ---v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~ 316 (477)
T TIGR01722 241 ---VQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEM 316 (477)
T ss_pred ---EEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 376 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 376 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
||++++.+++++.+++++|+++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||
T Consensus 317 Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai 396 (477)
T TIGR01722 317 GPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAI 396 (477)
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHH
Confidence 9999999999999999999999999999997631 247899999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCccCcCCCCCC--CCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~-~~~PfGG~~~SG~G--~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||+++|||+|.++++++++++++|+||||++.... +.+||||+|.||+| +++|++++++||+.|+|+++
T Consensus 397 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 397 ALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred HHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence 9999999999999999999999999999999999999865543 67899999999999 57899999999999999876
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-99 Score=808.95 Aligned_cols=461 Identities=40% Similarity=0.657 Sum_probs=437.7
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (533)
+||+|+|+.+.++++++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 48999999876678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHh
Q 009516 137 LITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (533)
Q Consensus 137 ~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 215 (533)
++++|+|||..++. .|+..+++.++|+++..+...+... ....+.+++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 99999999999986 4999999999999988876544321 23467789999999999999999999999999999
Q ss_pred hcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccc
Q 009516 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (533)
Q Consensus 216 aaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~ 295 (533)
++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.++++.|+.|++++.|+||||+.+|+.|++.++.++||
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~ 235 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR 235 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCe
Confidence 99999999999999999999999999999999999999987778999999999999999999999999999999999999
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCccc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 375 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 375 (533)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+++++++
T Consensus 236 ---v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 312 (466)
T cd07138 236 ---VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTL 312 (466)
T ss_pred ---EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 376 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 376 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
||++++.+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||+|+
T Consensus 313 gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 392 (466)
T cd07138 313 GPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIA 392 (466)
T ss_pred CccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHH
Confidence 9999999999999999999999999999996432 2478999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
++|+++|||+++|||+|.+++.++++++++|+||||+.. ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 393 ~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 393 IANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999999999999999999999999864 4678999999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-99 Score=807.85 Aligned_cols=465 Identities=40% Similarity=0.666 Sum_probs=438.6
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH--hccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
+||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+. |+.++.++|.++|+++++.|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 489999998655688999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcc-cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
++++++|+|||..++. .|+..+++.++||++.+++..+.. .+.. .+...+.+++|+|||++|+|||||+.+.+++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~ 159 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGS-GGGHVLVRREPVGVVAAIVPWNAPLFLAALKIA 159 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-CCceEEEEEEeccEEEEEcCCchHHHHHHHHHH
Confidence 9999999999998775 499999999999999887764322 2221 245678899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.++++
T Consensus 160 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~ 238 (471)
T cd07139 160 PALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGER 238 (471)
T ss_pred HHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998 557889999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 239 ~~~---~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 315 (471)
T cd07139 239 LAR---VTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPA 315 (471)
T ss_pred CCE---EEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCC
Confidence 998 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+++||++++.+++++.+++++++.+|+++++||.... ..++|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 316 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 395 (471)
T cd07139 316 TQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDA 395 (471)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHH
Confidence 9999999999999999999999999999999997643 24789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|+++|+++|||+++|||+|.+++.++++++++|+|+||++. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 396 i~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~~ 471 (471)
T cd07139 396 VRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIYL 471 (471)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999999999876 56789999999999999999999999999999863
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-98 Score=807.82 Aligned_cols=464 Identities=31% Similarity=0.484 Sum_probs=433.1
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (533)
+||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++
T Consensus 3 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (487)
T PRK09457 3 LWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAE 81 (487)
T ss_pred ceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 6899999975 367899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhh
Q 009516 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (533)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 216 (533)
++++|+|||+.+++.|+..+++.++|++....+..+...+. .++...+++++|+|||++|+|||||+..+++++++||+
T Consensus 82 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 160 (487)
T PRK09457 82 VIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE-MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 160 (487)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877665543322 23556788999999999999999999999999999999
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC-ccc
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKK 295 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~-~k~ 295 (533)
+||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|+.|++|+.|+||||+++|+.|++.++++ .++
T Consensus 161 aGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~ 239 (487)
T PRK09457 161 AGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKI 239 (487)
T ss_pred cCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCc
Confidence 999999999999999999999999999999999999998 567899999999999999999999999999987755 466
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHhhcCccCCCC-CCCc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGF-GEGV 373 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p~-~~~~ 373 (533)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|+ ++++
T Consensus 240 ---~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 240 ---LALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred ---EEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 899999999999999999999999999999999999999999999999998 99999999999999999997 7899
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 453 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~ 453 (533)
++||+++..+++++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|+||+|++
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~ 395 (487)
T PRK09457 317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRL 395 (487)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999988654345789999999 69999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 454 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 454 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+|+++|||+++|||+|.++++++++++++|+||||..... .+.+||||+|.||+||++|. ...+||+.|+++++
T Consensus 396 ~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~-~~~~~~~~k~~~~~ 470 (487)
T PRK09457 396 ANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAY-YAADYCAYPMASLE 470 (487)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCch-hHhhheeeeEEEEe
Confidence 9999999999999999999999999999999999987553 35789999999999999995 45669999999876
|
|
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-98 Score=811.39 Aligned_cols=468 Identities=31% Similarity=0.527 Sum_probs=439.5
Q ss_pred ccccceecCEEeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
...+.||+|+|+.+ +.+++++||+ ||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++
T Consensus 35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 112 (514)
T PRK03137 35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRK 112 (514)
T ss_pred cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 45568999999974 6789999999 69999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHh-CcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY-GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
++|++++++|+|||+.+++.|+..+++.++||+..+++.. +.... ..++...+++++|+|||++|+|||||+..++++
T Consensus 113 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 191 (514)
T PRK03137 113 HEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVE-SRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGM 191 (514)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceEEEEEecCcEEEEECCCccHHHHHHHH
Confidence 9999999999999999999999999999999999987764 22222 224567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+++|++.+.++.|+.|++|++|+||||+.+|+.|++.++
T Consensus 192 i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa 271 (514)
T PRK03137 192 TLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAA 271 (514)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999988
Q ss_pred c------CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCc
Q 009516 291 G------TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 364 (533)
Q Consensus 291 ~------~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 364 (533)
+ ++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 272 ~~~~~~~~l~~---v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~ 348 (514)
T PRK03137 272 KVQPGQIWLKR---VIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELT 348 (514)
T ss_pred cccccccccce---EEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCC
Confidence 6 6778 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEee
Q 009516 365 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444 (533)
Q Consensus 365 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~ 444 (533)
+|+|.+++ ++||++++.+++++.+++++++++ +++++||......|+|++|||+.+++++|++++||+||||++|++|
T Consensus 349 ~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 426 (514)
T PRK03137 349 VGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKA 426 (514)
T ss_pred CCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEec
Confidence 99999998 999999999999999999999887 6999999765345799999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCcCCCCCC-CCChHHHHHhhhe
Q 009516 445 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLE 521 (533)
Q Consensus 445 ~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~--~~~~PfGG~~~SG~G-~~gg~~~l~~~~~ 521 (533)
+|++|+|+++|+++|||+++|||+|.+++.++++++++|+||||+.... .+.+||||+|.||+| +++|++++++||+
T Consensus 427 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~ 506 (514)
T PRK03137 427 KDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQ 506 (514)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhce
Confidence 9999999999999999999999999999999999999999999987543 356899999999999 6899999999999
Q ss_pred eeEEEEe
Q 009516 522 IKYVCLG 528 (533)
Q Consensus 522 ~k~v~~~ 528 (533)
.|+|+..
T Consensus 507 ~k~v~~~ 513 (514)
T PRK03137 507 AKTVSEM 513 (514)
T ss_pred EEEEEEe
Confidence 9998754
|
|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-98 Score=803.98 Aligned_cols=460 Identities=38% Similarity=0.595 Sum_probs=431.5
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
..||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++|+ +.++..+|.++|++++++|++++++|+
T Consensus 5 ~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela 79 (472)
T TIGR03250 5 ALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS 79 (472)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4689999986 36889999999999999999999999999999998875 578999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCC----CCCCceeEEEeeec-eEEEEEcCCCcchHHHHHH
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA----TLPDRRLFVLKQPV-GVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~~~~~ 210 (533)
+++++|+|||+.+++.|+..+++.++||+..+.+..+...+. ...+...+..++|+ |||++|+|||||+.+++++
T Consensus 80 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~ 159 (472)
T TIGR03250 80 DLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHK 159 (472)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHH
Confidence 999999999999999999999999999999887766543321 11234568899998 9999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 239 (472)
T TIGR03250 160 IAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG 239 (472)
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999998875
Q ss_pred cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 291 ~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
++| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|++
T Consensus 240 --~~~---~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 314 (472)
T TIGR03250 240 --YRR---QVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMD 314 (472)
T ss_pred --CCc---eEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCC
Confidence 677 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+++++||++++.+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||+
T Consensus 315 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ea 391 (472)
T TIGR03250 315 PSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDA 391 (472)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHH
Confidence 9999999999999999999999999999999999965 3799999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCccCcCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~-~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+++|+++|||++||||+|.+++.++++++++|+||||+..... +.+||||+|.||+| ++||++++++||+.|+|+++
T Consensus 392 i~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 392 IRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred HHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999876433 46899999999999 56889999999999999875
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-98 Score=806.65 Aligned_cols=461 Identities=27% Similarity=0.373 Sum_probs=421.1
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
++||||+|+.+ ++++++++||+||+++++++.++ +|+++|+++|++| |+.|+.++..+|+++|+++++.|++++++|
T Consensus 2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~l 79 (513)
T cd07128 2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDL 79 (513)
T ss_pred ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999986 36889999999999999999875 8999999999997 799999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhC--------cccCCCCCC-ceeEEEeee-ceEEEEEcCCCcch
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG--------EIIPATLPD-RRLFVLKQP-VGVAGAITPWNFPL 204 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~GVv~~I~p~N~P~ 204 (533)
+++ ++|+|||+.+++.|+..+++.++||++++++..+ ...+...++ ...++.++| +|||++|+|||||+
T Consensus 80 a~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 158 (513)
T cd07128 80 YAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPV 158 (513)
T ss_pred HHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHH
Confidence 996 8999999999999999999999999999877642 222221112 135678999 59999999999999
Q ss_pred HHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHH
Q 009516 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283 (533)
Q Consensus 205 ~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 283 (533)
.++++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.++++.| +.+++|+||||+++|+
T Consensus 159 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G~ 235 (513)
T cd07128 159 WGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATAA 235 (513)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 99999999998654444443 5689999999999999
Q ss_pred HHHHHh--hcCccccceeeecCCCCCcEEEccCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHH
Q 009516 284 KLMAGA--AGTVKKVCRVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356 (533)
Q Consensus 284 ~i~~~~--~~~~k~~~~~~lElgG~~~~iV~~dAd-----~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l 356 (533)
.|++.+ +++++| +++|||||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 236 ~i~~~a~~a~~~~~---~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 236 KLRAHPNIVARSIR---FNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHhhhhccCce---EEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 999985 478888 999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCccc-------CCCCceeecEEeccCCC--CC
Q 009516 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKS--EM 427 (533)
Q Consensus 357 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~~~~~~Ptvl~~~~~--~~ 427 (533)
+++++++++|+|+++++++||++++.+++++.++|++|+++ |++++||... ..+|+|++|||+.++++ +|
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 99999999999999999999999999999999999999988 9999999652 13478999999998887 48
Q ss_pred cccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc--eeEEEECCCCC---------CCCC
Q 009516 428 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI---------STEV 496 (533)
Q Consensus 428 ~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~V~iN~~~~---------~~~~ 496 (533)
.+++||+||||++|++|+|+||+|+++|+++|||++||||+|.+++.+++++|+ +|+||||.... ..+.
T Consensus 392 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~ 471 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQ 471 (513)
T ss_pred hHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCC
Confidence 999999999999999999999999999999999999999999999999999997 99999998642 2357
Q ss_pred CCccCcCCCCCCCC-ChHHHHHhhheeeEEE
Q 009516 497 APFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 526 (533)
Q Consensus 497 ~PfGG~~~SG~G~~-gg~~~l~~~~~~k~v~ 526 (533)
+||||+|.||+|++ +|.+++++||+.|+|.
T Consensus 472 ~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 472 LVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 89999999999999 5799999999999874
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-98 Score=807.11 Aligned_cols=471 Identities=31% Similarity=0.508 Sum_probs=442.4
Q ss_pred CccccceecCEEeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHh
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (533)
+...+.||+|+|+.+ +.+++++||. ||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++
T Consensus 16 ~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 93 (500)
T cd07083 16 GRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRR 93 (500)
T ss_pred cccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhC
Confidence 445678999999974 6789999997 6999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccC-CCCCCceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
+++|++++++|+|||+.++..|+..+++.++||++++.+..+.... ...++...+++++|+|||++|+|||||+.+.++
T Consensus 94 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~ 173 (500)
T cd07083 94 RRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTG 173 (500)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHHH
Confidence 9999999999999999999999999999999999999887654321 112356678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.|++|++|+||||+.+|+.|++.+
T Consensus 174 ~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~a 253 (500)
T cd07083 174 MIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAA 253 (500)
T ss_pred HHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999999
Q ss_pred hcCc------cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcC
Q 009516 290 AGTV------KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 363 (533)
Q Consensus 290 ~~~~------k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 363 (533)
++++ +| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++
T Consensus 254 a~~~~~~~~~~~---v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 330 (500)
T cd07083 254 ARLAPGQTWFKR---LYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERL 330 (500)
T ss_pred hhccccccccCc---EEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcC
Confidence 8876 77 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEe
Q 009516 364 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 443 (533)
Q Consensus 364 ~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~ 443 (533)
++|+|.++++++||++++.+++++.+++++++.+| ++++||......|+|++|||+.+++++|++++||+||||++|++
T Consensus 331 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 409 (500)
T cd07083 331 SVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIR 409 (500)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEE
Confidence 99999999999999999999999999999999887 99999976544578999999999999999999999999999999
Q ss_pred eC--CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCC--CCCCccCcCCCCCC-CCChHHHHHh
Q 009516 444 FK--TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDE 518 (533)
Q Consensus 444 ~~--~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~--~~~PfGG~~~SG~G-~~gg~~~l~~ 518 (533)
|+ |+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... +.+||||+|.||+| +++|++++++
T Consensus 410 ~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~ 489 (500)
T cd07083 410 YKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRR 489 (500)
T ss_pred eCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHH
Confidence 99 9999999999999999999999999999999999999999999876543 46899999999999 6899999999
Q ss_pred hheeeEEEEe
Q 009516 519 FLEIKYVCLG 528 (533)
Q Consensus 519 ~~~~k~v~~~ 528 (533)
||+.|+|+..
T Consensus 490 ~~~~k~~~~~ 499 (500)
T cd07083 490 FLEMKAVAER 499 (500)
T ss_pred hhheeEEEEc
Confidence 9999998753
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-98 Score=804.84 Aligned_cols=465 Identities=31% Similarity=0.514 Sum_probs=435.7
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||+|+|+.+.++++++++||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|++++++
T Consensus 15 ~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~e 94 (496)
T PLN00412 15 VYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAP 94 (496)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999765678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCc--ccCC-----CCCCceeEEEeeeceEEEEEcCCCcchHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE--IIPA-----TLPDRRLFVLKQPVGVAGAITPWNFPLAM 206 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~--~~~~-----~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 206 (533)
|++++++|+|||..+++.|+..+++.++|++..+.+..+. ..+. ...+...+++++|+|||++|+|||||+..
T Consensus 95 l~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 174 (496)
T PLN00412 95 IAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNL 174 (496)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHH
Confidence 9999999999999999999999999999999887765432 2211 11123457899999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHH
Q 009516 207 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286 (533)
Q Consensus 207 ~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 286 (533)
.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.|++|+.|.|||| .+|+.++
T Consensus 175 ~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~ 253 (496)
T PLN00412 175 AVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAIS 253 (496)
T ss_pred HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHH
Confidence 999999999999999999999999999999999999999999999999877788999999999999999999 9999999
Q ss_pred HHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccC
Q 009516 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 287 ~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 366 (533)
+.++ ++| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|
T Consensus 254 ~~a~--~~~---~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 328 (496)
T PLN00412 254 KKAG--MVP---LQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVG 328 (496)
T ss_pred HHhC--CCc---EEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccC
Confidence 8875 677 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
+|.+ ++++||++++.+++++.+++++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 329 ~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~ 404 (496)
T PLN00412 329 PPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 404 (496)
T ss_pred CCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCC
Confidence 9987 789999999999999999999999999999998754 379999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|
T Consensus 405 ~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i 484 (496)
T PLN00412 405 VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKST 484 (496)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceEEE
Confidence 9999999999999999999999999999999999999999998764 345799999999999999999999999999999
Q ss_pred EEe
Q 009516 526 CLG 528 (533)
Q Consensus 526 ~~~ 528 (533)
+++
T Consensus 485 ~~~ 487 (496)
T PLN00412 485 VIN 487 (496)
T ss_pred EEe
Confidence 875
|
|
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-98 Score=801.93 Aligned_cols=456 Identities=40% Similarity=0.662 Sum_probs=433.5
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++
T Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (480)
T cd07111 21 SFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRL 100 (480)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35689999999865578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||+.+++. |+..+++.+++++.+.+...+ ....++|+|||++|+|||||+.+.+++++
T Consensus 101 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i~ 169 (480)
T cd07111 101 FAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPWNFPLLMLAWKIC 169 (480)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCCccHHHHHHHHHH
Confidence 999999999999999984 999999999999887765421 13457999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++ +.+..|+.|++++.|+||||+.+|+.|++.++++
T Consensus 170 ~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~ 248 (480)
T cd07111 170 PALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAGT 248 (480)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999864 6789999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 249 ~~~---~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 325 (480)
T cd07111 249 GKK---LSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKA 325 (480)
T ss_pred CCc---EEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||++++.+++++.+++++++.+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 326 ~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~ 405 (480)
T cd07111 326 IDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVA 405 (480)
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHH
Confidence 99999999999999999999999999999999875333579999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeE
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~ 524 (533)
++|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+
T Consensus 406 ~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 406 LANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 999999999999999999999999999999999999987777789999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-98 Score=797.46 Aligned_cols=449 Identities=39% Similarity=0.604 Sum_probs=428.3
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH--hccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (533)
++||+||+++++++.++.+|++.|++.|++||+. |+. ++.+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchH
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~ 231 (533)
|+..+++.++||++.+++..+...+. .++...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 99999999999999988876654432 24567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEE
Q 009516 232 TALAAAELALQ-AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI 310 (533)
Q Consensus 232 ~~~~l~~ll~~-aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~i 310 (533)
++..+++++++ +|+|+|++|++++++.++++.|+.||+++.|+||||+.+|+.|++.+++++|| +++|+|||||+|
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~---~~lElGG~~~~I 235 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKR---LGLELGGKTPCI 235 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCe---EEEECCCCCeeE
Confidence 99999999999 79999999999987778899999999999999999999999999999999999 999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHH
Q 009516 311 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 390 (533)
Q Consensus 311 V~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 390 (533)
|++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++++++
T Consensus 236 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~ 315 (455)
T cd07120 236 VFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRM 315 (455)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEc
Q 009516 391 VEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467 (533)
Q Consensus 391 i~~a~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s 467 (533)
+++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||
T Consensus 316 i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift 395 (455)
T cd07120 316 VERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWT 395 (455)
T ss_pred HHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEc
Confidence 9999999999999886532 2478999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 468 ~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|++
T Consensus 396 ~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 396 RDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred CCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 999999999999999999999987777789999999999999999999999999999864
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-98 Score=797.64 Aligned_cols=450 Identities=36% Similarity=0.608 Sum_probs=429.2
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (533)
++||.||+++++++.++.+|++.+++.|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHH
Q 009516 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (533)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~ 233 (533)
..+++.++|++...+.+.+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 9999999999988877766654433 245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEcc
Q 009516 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313 (533)
Q Consensus 234 ~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~ 313 (533)
..+++++.++ +|+|++|++++++.+.++.|+.||++++|+||||+++|+.|++.+++++|| +++|+|||||+||++
T Consensus 160 ~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~---~~lElgG~~p~iV~~ 235 (456)
T cd07107 160 LRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKH---VTLELGGKNALIVFP 235 (456)
T ss_pred HHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCe---EEEECCCCCeEEECC
Confidence 9999999995 999999999987777899999999999999999999999999999999999 999999999999999
Q ss_pred CCCHHHHHHHHHHHH-hhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 009516 314 DADLNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392 (533)
Q Consensus 314 dAd~d~aa~~i~~~~-f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 392 (533)
|||+|.|++.+++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++++++++
T Consensus 236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~ 315 (456)
T cd07107 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYID 315 (456)
T ss_pred CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHH
Confidence 999999999999995 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 393 DAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 393 ~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
+|+.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~ 395 (456)
T cd07107 316 SAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTN 395 (456)
T ss_pred HHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECC
Confidence 99999999999997532 24789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|.+++.++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 396 DISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999887777899999999999999999999999999999874
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-98 Score=797.55 Aligned_cols=450 Identities=45% Similarity=0.710 Sum_probs=429.1
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (533)
++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC---cccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCch
Q 009516 154 DYGAKFIEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230 (533)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp 230 (533)
..+++.++||++.++++.. ...+...++...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999999999887642 2223223355678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEE
Q 009516 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI 310 (533)
Q Consensus 231 ~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~i 310 (533)
+++..+++++.++|+|+|++|+|++++.+.++.|+.||+++.|+||||+.+|+.|++.+++++|| +++|+|||||+|
T Consensus 161 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~---~~lElgG~~~~i 237 (456)
T cd07110 161 LTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKP---VSLELGGKSPII 237 (456)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCe---EEEEcCCCCeeE
Confidence 99999999999999999999999997778899999999999999999999999999999999999 999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHH
Q 009516 311 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 390 (533)
Q Consensus 311 V~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 390 (533)
|++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|+++++++||++++.++++++++
T Consensus 238 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~ 317 (456)
T cd07110 238 VFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSF 317 (456)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 391 VEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 391 i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
+++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+
T Consensus 318 v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 397 (456)
T cd07110 318 IARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISR 397 (456)
T ss_pred HHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECC
Confidence 9999999999999997643 35789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
|.+++.++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|+
T Consensus 398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 398 DAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 9999999999999999999987766778999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-98 Score=795.58 Aligned_cols=450 Identities=42% Similarity=0.685 Sum_probs=429.8
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH--hccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHH
Q 009516 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152 (533)
Q Consensus 75 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E 152 (533)
+||+||+++++++.++.+|++++++.|++||+. |+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 689999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHH
Q 009516 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (533)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~ 232 (533)
++.+++.++|++...++..+...+...++...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999998877765444322234566889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEc
Q 009516 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312 (533)
Q Consensus 233 ~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~ 312 (533)
+..+.+++.++|+|+|++|++++++.++++.|+.|++++.|.||||+.+|+.|++.++.++|| +++|+|||||+||+
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~---~~lelgG~n~~iV~ 238 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKK---VSLELGGKNPQIVF 238 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc---EEeccCCCCceEEC
Confidence 999999999999999999999987777899999999999999999999999999999999999 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 009516 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392 (533)
Q Consensus 313 ~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 392 (533)
+|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.++++
T Consensus 239 ~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 318 (454)
T cd07118 239 ADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVD 318 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009516 393 DAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471 (533)
Q Consensus 393 ~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 471 (533)
+++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 319 ~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~ 398 (454)
T cd07118 319 AGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDID 398 (454)
T ss_pred HHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHH
Confidence 99999999999998754 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 472 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 472 ~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
++.++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|++
T Consensus 399 ~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~~ 454 (454)
T cd07118 399 TALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVHL 454 (454)
T ss_pred HHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 99999999999999999988777889999999999999999999999999999863
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-98 Score=796.64 Aligned_cols=451 Identities=47% Similarity=0.743 Sum_probs=428.3
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH
Q 009516 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (533)
Q Consensus 72 ~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (533)
++++||.||+++++++.++.+|++++++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCC----CCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCC
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (533)
|+..+++.++|+++.++.+.+...+... .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999988766554433221 134567889999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCC
Q 009516 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307 (533)
Q Consensus 228 ~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~ 307 (533)
.+|+++..+.+++.++|+|+|++|+++|++.+.++.|+.|++++.|.||||+.+|+.|++.++++++| +++|+||||
T Consensus 161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~---v~lElgG~n 237 (456)
T cd07145 161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKK---VALELGGSD 237 (456)
T ss_pred cchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCc---eEEecCCCC
Confidence 99999999999999999999999999997778899999999999999999999999999999999999 999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHH
Q 009516 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 387 (533)
Q Consensus 308 ~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~ 387 (533)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++||++++.+++++
T Consensus 238 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 317 (456)
T cd07145 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERM 317 (456)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEc
Q 009516 388 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467 (533)
Q Consensus 388 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s 467 (533)
++++++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||
T Consensus 318 ~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 395 (456)
T cd07145 318 ENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFT 395 (456)
T ss_pred HHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999999999765 379999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCC-CCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 468 NNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 468 ~d~~~~~~~a~~l~~G~V~iN~~~~~~-~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
+|.+++.++++++++|+||||+..... +.+||||+|+||+|+++|++|+++|++.|+|++
T Consensus 396 ~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 396 NDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 999999999999999999999876533 579999999999999999999999999999864
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-97 Score=796.91 Aligned_cols=464 Identities=32% Similarity=0.501 Sum_probs=432.1
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (533)
.||+|+|+.+ ++++++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4899999875 468899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhh
Q 009516 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (533)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 216 (533)
++++|+|||..+++.|+..+++.++|++.......+...+. .++...+++++|+|||++|+|||||+..+++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALa 158 (484)
T TIGR03240 80 VIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP-MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 158 (484)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988877665543321 23445688899999999999999999999999999999
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC-ccc
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKK 295 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~-~k~ 295 (533)
+||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+++|+.|++.++++ .++
T Consensus 159 aGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~ 237 (484)
T TIGR03240 159 AGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKI 237 (484)
T ss_pred cCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCc
Confidence 999999999999999999999999999999999999998 567889999999999999999999999999987755 577
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHhhcCccCCC-CCCCc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDG-FGEGV 373 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p-~~~~~ 373 (533)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.+.++++++|+| .++++
T Consensus 238 ---~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~ 314 (484)
T TIGR03240 238 ---LALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQP 314 (484)
T ss_pred ---EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999999985 9999999999999999997 57889
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 453 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~ 453 (533)
++||++++.+++++.+++++++++|+++++||...+.+++|++|||+ +++++|.+++||+||||++|++|+|+||||++
T Consensus 315 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~ 393 (484)
T TIGR03240 315 FMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAI 393 (484)
T ss_pred cccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999988654345789999999 58899999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 454 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 454 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+|+++|||+++|||+|.++++++++++++|+||||..... .+.+||||+|.||+|+++|.++++ ||+.|+++++
T Consensus 394 ~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~ 468 (484)
T TIGR03240 394 ANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLE 468 (484)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEe
Confidence 9999999999999999999999999999999999987653 457899999999999999966655 9999999887
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-97 Score=793.08 Aligned_cols=448 Identities=35% Similarity=0.519 Sum_probs=423.3
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH-hccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH
Q 009516 73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (533)
Q Consensus 73 ~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (533)
+++||.||+++++++.++.+|+++++++|++||+. |+.++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 57899999999999999999999999999999998 56799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCC
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (533)
|+..+++.++||++.+++..+...+.. .++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 161 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence 999999999999999888766543321 1345678899999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCC
Q 009516 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307 (533)
Q Consensus 228 ~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~ 307 (533)
.+|+++..++++++++|+|+|++|+++++ .+.++.|+.|++|++|+||||+.+|+.|++.++. .+| +++|+||||
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~---~~lElGG~~ 236 (455)
T cd07148 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTR---CALEHGGAA 236 (455)
T ss_pred cccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCc---EEEecCCCC
Confidence 99999999999999999999999999985 4678999999999999999999999999998875 477 999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHH
Q 009516 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 387 (533)
Q Consensus 308 ~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~ 387 (533)
|+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++
T Consensus 237 p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 316 (455)
T cd07148 237 PVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRV 316 (455)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEc
Q 009516 388 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467 (533)
Q Consensus 388 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s 467 (533)
.+++++++.+|+++++||... .++|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||
T Consensus 317 ~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t 394 (455)
T cd07148 317 EEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFT 394 (455)
T ss_pred HHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEc
Confidence 999999999999999999765 368999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCC-CCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 468 NNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 468 ~d~~~~~~~a~~l~~G~V~iN~~~~~~-~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
+|.+++.++++++++|+||||++.... +.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 395 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 395 KDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred CCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 999999999999999999999876433 468999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-97 Score=794.42 Aligned_cols=450 Identities=43% Similarity=0.715 Sum_probs=431.3
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH
Q 009516 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (533)
Q Consensus 72 ~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (533)
++++||.||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchH
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~ 231 (533)
|+..+++.+++++..+++..+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999999998876665554434667889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEE
Q 009516 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311 (533)
Q Consensus 232 ~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV 311 (533)
++..+.+++.++|+|+|++|++++++.+.++.|+.|++|++|+||||+.+|+.|++.+++++|| +++|+|||||+||
T Consensus 161 t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~---~~lelGG~~~~iV 237 (451)
T cd07150 161 IGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKK---ITLELGGKNPLIV 237 (451)
T ss_pred HHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc---eEeecCCCCeeEE
Confidence 9999999999999999999999987778899999999999999999999999999999999999 9999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHH
Q 009516 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391 (533)
Q Consensus 312 ~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 391 (533)
++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus 238 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 317 (451)
T cd07150 238 LADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQV 317 (451)
T ss_pred CCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009516 392 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471 (533)
Q Consensus 392 ~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 471 (533)
++++.+|+++++||... |+|++|||+.+++++|.+++||+||||++|++|+|+||+|+++|+++|||+++|||+|.+
T Consensus 318 ~~a~~~Ga~vl~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~ 394 (451)
T cd07150 318 EDAVAKGAKLLTGGKYD---GNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQ 394 (451)
T ss_pred HHHHhCCCEEEeCCccC---CcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHH
Confidence 99999999999998653 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCC-CCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 472 RTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 472 ~~~~~a~~l~~G~V~iN~~~~~~-~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
++.++++++++|+|+||++.... +.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 395 ~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 395 RAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred HHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 99999999999999999987643 578999999999999999999999999999864
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-98 Score=801.81 Aligned_cols=458 Identities=47% Similarity=0.776 Sum_probs=434.1
Q ss_pred EeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 009516 63 WIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQ 142 (533)
Q Consensus 63 ~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 142 (533)
|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 777754 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEE
Q 009516 143 GKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222 (533)
Q Consensus 143 Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VV 222 (533)
|||+.+++.|+..+++.++||+++++++.+...+. ..+...+.+++|+|||++|+|||||+..+++++++||++||+||
T Consensus 80 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VV 158 (462)
T PF00171_consen 80 GKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVV 158 (462)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEE
T ss_pred ccccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhcccccce
Confidence 99999999999999999999999999977766555 36788999999999999999999999999999999999999999
Q ss_pred EecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeec
Q 009516 223 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLE 302 (533)
Q Consensus 223 lKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lE 302 (533)
+|||+.+|+++..+++++.++|+|+|++|++++++.+++..|+.||+++.|.||||+++|+.|++.+++++|| +++|
T Consensus 159 lkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~---v~le 235 (462)
T PF00171_consen 159 LKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKP---VVLE 235 (462)
T ss_dssp EEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSE---EEEE
T ss_pred eeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccccccc---cccc
Confidence 9999999999999999999999999999999998889999999999999999999999999999999988999 9999
Q ss_pred CCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHH
Q 009516 303 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKA 382 (533)
Q Consensus 303 lgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~ 382 (533)
+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||+++..
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCeEEeCCc---ccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCC
Q 009516 383 ALEKVETFVEDAVSKGAKVLLGGR---RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA 459 (533)
Q Consensus 383 ~~~~~~~~i~~a~~~Ga~v~~gg~---~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~ 459 (533)
+.+++.+++++++.+||++++||. .....|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|
T Consensus 316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 395 (462)
T PF00171_consen 316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEY 395 (462)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSE
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCC
Confidence 999999999999999999999993 22256799999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCC-CCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 460 GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 460 gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~-~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
||+++|||+|.++++++++++++|+||||++....+. +||||+|.||+|+++|.+|+++||+.|+|
T Consensus 396 gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 396 GLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp ESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred CceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 9999999999999999999999999999999876554 69999999999999999999999999987
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-97 Score=801.48 Aligned_cols=467 Identities=40% Similarity=0.615 Sum_probs=438.5
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.+++|.|.|-. ++++++++||+||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|++++++|
T Consensus 19 ~~~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~el 96 (524)
T PRK09407 19 LRRLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREEL 96 (524)
T ss_pred HHHHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 34678888754 5889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCccc-CCCCC-CceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-PATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
++++++|+|||..++..|+..++..++||+..+++..+... ....+ ....+..++|+|||++|+|||||+...+++++
T Consensus 97 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~ 176 (524)
T PRK09407 97 LDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAI 176 (524)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHH
Confidence 99999999999999999999999999999998887655322 11111 24678899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.| ++.|+||||+.+|+.|++.++++
T Consensus 177 ~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~ 254 (524)
T PRK09407 177 PALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRR 254 (524)
T ss_pred HHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999777889999986 67899999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
++| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|++++
T Consensus 255 ~~~---v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~ 331 (524)
T PRK09407 255 LIG---FSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYS 331 (524)
T ss_pred CCc---EEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcC
Confidence 998 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
+++||++++.+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+||+|
T Consensus 332 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai 411 (524)
T PRK09407 332 ADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAV 411 (524)
T ss_pred CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHH
Confidence 9999999999999999999999999999999997533 357899999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC---CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~---~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||+++|||+|.+++.++++++++|+||||++.. ..+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 412 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 491 (524)
T PRK09407 412 ERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQ 491 (524)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEc
Confidence 99999999999999999999999999999999999998654 345689999999999999999999999999999876
|
|
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-97 Score=816.16 Aligned_cols=462 Identities=25% Similarity=0.356 Sum_probs=422.3
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
++||||+|+.+. +++++++||+||+++++++.++ +|+++|+++|++| |+.|+.++..+|+++|++++++|++++++|
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 79 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEAL 79 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999763 6789999999999999999999 6999999999996 999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHh--------CcccCCCCCC-ceeEEEeeec-eEEEEEcCCCcch
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPWNFPL 204 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~I~p~N~P~ 204 (533)
++ +++|+|||+.+++.|+..+++.++||++.+++.. +...+...++ ...++.++|+ |||++|+|||||+
T Consensus 80 a~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~ 158 (663)
T TIGR02278 80 YA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPV 158 (663)
T ss_pred HH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHH
Confidence 99 5999999999999999999999999999887632 3333322222 2468899998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHH
Q 009516 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283 (533)
Q Consensus 205 ~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 283 (533)
.++++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+|+|+..+ .+..++++++|+||||+++|+
T Consensus 159 ~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~~---~~~~~~~~~~V~FTGS~~~G~ 235 (663)
T TIGR02278 159 WGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAGD---LLDHLDHRDVVAFTGSAATAD 235 (663)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChHH---HHhcCCCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 999999999985333 333346789999999999999
Q ss_pred HHHHHh--hcCccccceeeecCCCCCcEEEccCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHH
Q 009516 284 KLMAGA--AGTVKKVCRVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356 (533)
Q Consensus 284 ~i~~~~--~~~~k~~~~~~lElgG~~~~iV~~dAd-----~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l 356 (533)
.|++.+ +++++| +++|||||||+||++||| +|.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 236 ~i~~~aaaa~~~~~---~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l 312 (663)
T TIGR02278 236 RLRAHPNVLERGIR---FNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL 312 (663)
T ss_pred HHHHhHhHHhcCce---EEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence 999874 478888 999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCC-cccccccc
Q 009516 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM-LVSREEVF 435 (533)
Q Consensus 357 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~-~~~~eE~F 435 (533)
.++++++++|+|+++++++||++++.++++++++|++|+++|+++++||... .+|+|++|||+.+++++| .+++||+|
T Consensus 313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhcccc
Confidence 9999999999999999999999999999999999999999999999999764 357999999999998886 79999999
Q ss_pred cceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc--ceeEEEE-CCCC--------CCCCCCCccCcCC
Q 009516 436 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGV-NEGL--------ISTEVAPFGGVKQ 504 (533)
Q Consensus 436 GPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l--~~G~V~i-N~~~--------~~~~~~PfGG~~~ 504 (533)
|||++|++|+|.||+|+++|+++|||++||||+|.+++.+++++| ++|+||| |.+. ...+.+||||+|+
T Consensus 392 GPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~ 471 (663)
T TIGR02278 392 GPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGR 471 (663)
T ss_pred CCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999 8999999 6421 1235789999999
Q ss_pred CCCCCC-ChHHHHHhhheeeEEEE
Q 009516 505 SGLGRE-GSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 505 SG~G~~-gg~~~l~~~~~~k~v~~ 527 (533)
||+|++ +|.+++++||+.|+|..
T Consensus 472 SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 472 AGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CcCCCccchHHHHHHhceeEEEEc
Confidence 999999 57899999999999865
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-97 Score=791.01 Aligned_cols=450 Identities=44% Similarity=0.705 Sum_probs=429.8
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (533)
++||+||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHH
Q 009516 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (533)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~ 233 (533)
..+++.++||+++.+.+.+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 9999999999998887665544332 256778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEcc
Q 009516 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313 (533)
Q Consensus 234 ~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~ 313 (533)
..+.+++.++|+|+|++|++++++ +.++.|+.|+++++|+||||+.+|+.|++.+++++|| +++|+|||||+||++
T Consensus 160 ~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~---~~lelgG~~p~iV~~ 235 (457)
T cd07090 160 LLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKH---VTLELGGKSPLIIFD 235 (457)
T ss_pred HHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCc---eEEecCCCCceEECC
Confidence 999999999999999999999854 6889999999999999999999999999999999999 999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 009516 314 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393 (533)
Q Consensus 314 dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 393 (533)
|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++||+++..+++++.+++++
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 315 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCeEEeCCcccC-----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 394 AVSKGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 394 a~~~Ga~v~~gg~~~~-----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+
T Consensus 316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~ 395 (457)
T cd07090 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR 395 (457)
T ss_pred HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcC
Confidence 9999999999997632 24789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|.++++++++++++|+||||+.....+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 396 DLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 999999999999999999999777777899999999999999999999999999999764
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-97 Score=789.44 Aligned_cols=451 Identities=41% Similarity=0.650 Sum_probs=428.7
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhc-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-H
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-G 151 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 151 (533)
++||+||+++++++.++.+|+++++++|++|++.|+ .++..+|.++|++++++|++++++|++++++|+|||+.++. .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 99999999999999999999999999999999999998775 5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcc-cCCC---CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCC
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEI-IPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (533)
|+..+++.++||++.+++..+.. .+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999988765543 2221 1345678999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCC
Q 009516 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307 (533)
Q Consensus 228 ~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~ 307 (533)
.+|.++..+.+++.++|+|+|++|+++|++.+++..|+.||+++.|.||||+.+|+.|++.+++++|| +++|+||||
T Consensus 161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~---~~lelgG~n 237 (459)
T cd07089 161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKR---VLLELGGKS 237 (459)
T ss_pred CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc---EEEECCCCC
Confidence 99999999999999999999999999997777899999999999999999999999999999999999 999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHH
Q 009516 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 387 (533)
Q Consensus 308 ~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~ 387 (533)
|+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+.+++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v 317 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV 317 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEE
Q 009516 388 ETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465 (533)
Q Consensus 388 ~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v 465 (533)
.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|
T Consensus 318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v 397 (459)
T cd07089 318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGV 397 (459)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEE
Confidence 9999999999999999997643 25789999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 466 ~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
||+|.++++++++++++|+|+||+....++.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 398 ~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~~ 459 (459)
T cd07089 398 WSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIAY 459 (459)
T ss_pred EcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEeC
Confidence 99999999999999999999999988777789999999999999999999999999999863
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-97 Score=789.17 Aligned_cols=449 Identities=41% Similarity=0.660 Sum_probs=427.5
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhc-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E 152 (533)
++||+||+++++++.++.+|++.++++|++|++.|. .++.++|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999876 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHH
Q 009516 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (533)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~ 232 (533)
+..+++.++||++..++..+...+.. ++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999999999887766554432 35678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEc
Q 009516 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312 (533)
Q Consensus 233 ~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~ 312 (533)
+..+++++.++|+|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.+++++|| +++|+|||||+||+
T Consensus 160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p---~~lElgG~~~~iV~ 236 (454)
T cd07109 160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVP---VTLELGGKSPQIVF 236 (454)
T ss_pred HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCc---EEEECCCCCceEEC
Confidence 999999999999999999999987778899999999999999999999999999999999999 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 009516 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392 (533)
Q Consensus 313 ~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 392 (533)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++++++++.++++
T Consensus 237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~ 315 (454)
T cd07109 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVA 315 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 689999999999999999999
Q ss_pred HHHHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCC
Q 009516 393 DAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 469 (533)
Q Consensus 393 ~a~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 469 (533)
+++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|
T Consensus 316 ~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d 395 (454)
T cd07109 316 RARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRD 395 (454)
T ss_pred HHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCC
Confidence 99999999999987542 357899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCC-CCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 470 LQRTWRVSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 470 ~~~~~~~a~~l~~G~V~iN~~~-~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
.+++.++++++++|+|+||+.. ...+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 396 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 454 (454)
T cd07109 396 GDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV 454 (454)
T ss_pred HHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEeC
Confidence 9999999999999999999977 455678999999999999999999999999999863
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-96 Score=796.16 Aligned_cols=470 Identities=31% Similarity=0.440 Sum_probs=437.7
Q ss_pred cccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
...+||+|+|.. ++++++++||.| |+++++++.++.+|++++++.|++|++.|+.++.++|.++|+++++.|+++++
T Consensus 32 ~~~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 109 (518)
T cd07125 32 EAIPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRG 109 (518)
T ss_pred ccCceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 455799999984 588999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcc-cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.+++.|+..+++.++|+++.+++..+.. .+.. .+...+.+++|+|||++|+|||||+...++++
T Consensus 110 ~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i 188 (518)
T cd07125 110 ELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGP-TGELNGLELHGRGVFVCISPWNFPLAIFTGQI 188 (518)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-CCceeEEEEecccEEEEECCcchHHHHHHHHH
Confidence 999999999999999999999999999999999988765442 2322 25667899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|+.|++++.|+||||+.+|+.|++.+++
T Consensus 189 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~ 268 (518)
T cd07125 189 AAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAE 268 (518)
T ss_pred HHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999766788999999999999999999999999999886
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
+.++.+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|+++
T Consensus 269 ~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 348 (518)
T cd07125 269 RDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDL 348 (518)
T ss_pred ccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCC
Confidence 63334449999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeC--CHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEEE 449 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~--~~~e 449 (533)
++++||++++.+++++.++++++.. ++++++||.....+|+|++|||+.++ +|++++||+||||++|++|+ |+||
T Consensus 349 ~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~de 425 (518)
T cd07125 349 STDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDE 425 (518)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHH
Confidence 9999999999999999999999987 57899998754225799999999887 89999999999999999999 9999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCcCCCCCCC-CChHHHHHhhheeeEEE
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~--~~~~PfGG~~~SG~G~-~gg~~~l~~~~~~k~v~ 526 (533)
||+++|+++|||+++|||+|.+++.++++++++|+||||+.... .+.+||||+|.||+|+ ++|++++++||+.|+|+
T Consensus 426 Ai~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~ 505 (518)
T cd07125 426 AIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVS 505 (518)
T ss_pred HHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999987653 3568999999999995 68999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 506 ~~~ 508 (518)
T cd07125 506 LNT 508 (518)
T ss_pred EEc
Confidence 763
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-96 Score=788.35 Aligned_cols=454 Identities=42% Similarity=0.692 Sum_probs=431.6
Q ss_pred CeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009516 70 KTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (533)
Q Consensus 70 ~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (533)
++++++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4688999999999999999999999999999999998 49999999999999999999999999999999999999999
Q ss_pred HHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecC
Q 009516 148 EAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226 (533)
Q Consensus 148 ~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 226 (533)
+++. |+..+++.++|++..+++..+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPT-GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 9975 99999999999999988876654332 234567889999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh-cCccccceeeecCCC
Q 009516 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVKKVCRVSLELGG 305 (533)
Q Consensus 227 ~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~-~~~k~~~~~~lElgG 305 (533)
+.+|+++..+++++.++|+|+|++|+|++++.+.+..|+.|++++.|.||||+.+|+.|++.++ .++|| +++|+||
T Consensus 161 ~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~---~~lelgG 237 (462)
T cd07112 161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKR---VWLECGG 237 (462)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCE---EEecCCC
Confidence 9999999999999999999999999999977788999999999999999999999999999988 48898 9999999
Q ss_pred CCcEEEccCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHH
Q 009516 306 NAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 384 (533)
Q Consensus 306 ~~~~iV~~dA-d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 384 (533)
+||+||++|| |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++
T Consensus 238 ~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 317 (462)
T cd07112 238 KSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHF 317 (462)
T ss_pred CCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHH
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcE
Q 009516 385 EKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 462 (533)
Q Consensus 385 ~~~~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~ 462 (533)
+++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+
T Consensus 318 ~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 397 (462)
T cd07112 318 DKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLA 397 (462)
T ss_pred HHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccce
Confidence 9999999999999999999997642 24789999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 463 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 463 a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
++|||+|.+++.++++++++|+|+||+.....+.+||||+|+||+|+++|++++++||+.|+|++
T Consensus 398 ~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 462 (462)
T cd07112 398 ASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTWI 462 (462)
T ss_pred EEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEEC
Confidence 99999999999999999999999999987777789999999999999999999999999999863
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-96 Score=787.42 Aligned_cols=450 Identities=44% Similarity=0.730 Sum_probs=430.5
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-HH
Q 009516 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EV 153 (533)
Q Consensus 75 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev 153 (533)
+||+||+++++++.++.++++++++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. |+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999974 99
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHH
Q 009516 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (533)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~ 233 (533)
..+++.++|++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 9999999999998887766544432 355678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEcc
Q 009516 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313 (533)
Q Consensus 234 ~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~ 313 (533)
..+.+++.++|+|+|++|++++++.++++.|+.|++++.|+||||+.+|+.|++.+++++|| +++|+|||||+||++
T Consensus 161 ~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~---~~lElgG~~p~iV~~ 237 (453)
T cd07115 161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKR---VSLELGGKSANIVFA 237 (453)
T ss_pred HHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCe---EEEecCCCCceEECC
Confidence 99999999999999999999997778899999999999999999999999999999999999 999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 009516 314 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393 (533)
Q Consensus 314 dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 393 (533)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 238 dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (453)
T cd07115 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDV 317 (453)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHH
Q 009516 394 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473 (533)
Q Consensus 394 a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~ 473 (533)
++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.+
T Consensus 318 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~ 397 (453)
T cd07115 318 GREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRA 397 (453)
T ss_pred HHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHH
Confidence 99999999999976533578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 474 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 474 ~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
.++++++++|+|+||+.....+.+||||+|+||+|+++|.+++++||+.|+|+++
T Consensus 398 ~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 398 HRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999999998777778899999999999999999999999999999774
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-96 Score=786.04 Aligned_cols=448 Identities=39% Similarity=0.622 Sum_probs=422.6
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHH
Q 009516 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 154 (533)
Q Consensus 75 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~ 154 (533)
.||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCccc-CCCCC-CceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHH
Q 009516 155 YGAKFIEFYAEEAKRVYGEII-PATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (533)
Q Consensus 155 ~~~~~l~~~a~~~~~~~~~~~-~~~~~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~ 232 (533)
.+++.++|++..+.+..+... +...+ ....+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 160 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT 160 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 999999999998877654322 21111 2467889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEc
Q 009516 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312 (533)
Q Consensus 233 ~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~ 312 (533)
+..+.+++.++|+|+|++|+++|++.+.+..|++| ++.|.||||+.+|+.|++.++++++| +++|||||||+||+
T Consensus 161 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~---~~lElgG~~p~iV~ 235 (454)
T cd07101 161 ALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIG---CSLELGGKNPMIVL 235 (454)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCc---EEEECCCCceEEEC
Confidence 99999999999999999999999878889999987 46799999999999999999999988 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 009516 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392 (533)
Q Consensus 313 ~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 392 (533)
+|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.++++++++++
T Consensus 236 ~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~ 315 (454)
T cd07101 236 EDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVD 315 (454)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009516 393 DAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471 (533)
Q Consensus 393 ~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 471 (533)
+++++|+++++||...+ .+++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 316 ~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 395 (454)
T cd07101 316 DAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGA 395 (454)
T ss_pred HHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 99999999999997533 35789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCC---CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 472 RTWRVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 472 ~~~~~a~~l~~G~V~iN~~~~---~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
++.++++++++|+||||++.. ..+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 396 ~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 396 RGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 999999999999999998654 34678999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-96 Score=792.95 Aligned_cols=464 Identities=25% Similarity=0.354 Sum_probs=420.4
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhh-HHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~-~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
++||+|+|+.+ .+.+++++||+||+++++++. +.+|+++|+++|++|+ +.|+.+++.+|+++|++++++|++++++|
T Consensus 6 ~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 83 (521)
T PRK11903 6 ANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAY 83 (521)
T ss_pred hhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999975 357899999999999999997 8899999999999995 99999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCC--------CCceeEEEeee-ceEEEEEcCCCcchH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL--------PDRRLFVLKQP-VGVAGAITPWNFPLA 205 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~GVv~~I~p~N~P~~ 205 (533)
++++++|+|||+.+++.|+..+++.++||+++++...+....... +....+..++| +|||++|+|||||+.
T Consensus 84 a~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~ 163 (521)
T PRK11903 84 YDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAW 163 (521)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHH
Confidence 999999999999999999999999999999998776543211110 12234677899 699999999999999
Q ss_pred HHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHH
Q 009516 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 284 (533)
Q Consensus 206 ~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~ 284 (533)
.+++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.++++.| +++++|+||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G~~ 240 (521)
T PRK11903 164 GLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETAAV 240 (521)
T ss_pred HHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHHHH
Confidence 999999999999999999999999999999999999999 99999999998666655544 78999999999999999
Q ss_pred HHHHh--hcCccccceeeecCCCCCcEEEccCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHH
Q 009516 285 LMAGA--AGTVKKVCRVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 357 (533)
Q Consensus 285 i~~~~--~~~~k~~~~~~lElgG~~~~iV~~dAd-----~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~ 357 (533)
|++.+ ++++|| +++|||||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++||+|+++|+
T Consensus 241 v~~~aa~~~~~~~---~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~ 317 (521)
T PRK11903 241 LRSHPAVVQRSVR---VNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALA 317 (521)
T ss_pred HHhhhhhhccCce---eEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHH
Confidence 99864 477888 999999999999999999 59999999999999999999999999999999999999999
Q ss_pred HHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC------CCCceeecEEeccCCC--CCcc
Q 009516 358 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS------LGMTFYEPTVLSNVKS--EMLV 429 (533)
Q Consensus 358 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~~~~~~Ptvl~~~~~--~~~~ 429 (533)
++++++++|+|+++++++||++++.+++++.++++. ..+|+++++||.... .+|+|++|||+.++++ ++.+
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i 396 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAV 396 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchH
Confidence 999999999999999999999999999999999996 568999999996521 2478999999986554 4788
Q ss_pred cccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc--ceeEEEECCCCC---------CCCCCC
Q 009516 430 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI---------STEVAP 498 (533)
Q Consensus 430 ~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l--~~G~V~iN~~~~---------~~~~~P 498 (533)
++||+||||++|++|+|+||+|+++|+++|||++||||+|.+++.++++++ ++|+||||+... ..+.+|
T Consensus 397 ~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~P 476 (521)
T PRK11903 397 HDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSL 476 (521)
T ss_pred HhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999 899999997542 345789
Q ss_pred ccCcCCCCCCCC-ChHHHHHhhheeeEEEEe
Q 009516 499 FGGVKQSGLGRE-GSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 499 fGG~~~SG~G~~-gg~~~l~~~~~~k~v~~~ 528 (533)
|||+|.||+||+ ||.+++++||+.|+|...
T Consensus 477 fGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~~ 507 (521)
T PRK11903 477 HGGPGRAGGGEELGGLRALAFYHRRSAVQAS 507 (521)
T ss_pred CCCCCcCcCCcccccHHHHHHHhccceeeCC
Confidence 999999999999 558999999999887644
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-96 Score=783.22 Aligned_cols=431 Identities=28% Similarity=0.415 Sum_probs=402.8
Q ss_pred CCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHH
Q 009516 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEA 167 (533)
Q Consensus 89 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~ 167 (533)
....|++.++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+|||..++.. |+..+++.++|+++.+
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999975 9999999999999998
Q ss_pred HHHhCcc---cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC
Q 009516 168 KRVYGEI---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 244 (533)
Q Consensus 168 ~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aG 244 (533)
++..+.. .+....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.||+++..+++++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~ 165 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y 165 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 8766521 11112234578999999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHH
Q 009516 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGA 324 (533)
Q Consensus 245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i 324 (533)
+|+|++|+|+|. .+.+..|+. +++++|+||||+.+|+.|++.+++++|| +++|||||||+||++|||+|.|++.+
T Consensus 166 lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~---v~LELGGk~p~iV~~dADl~~Aa~~i 240 (484)
T PLN02174 166 LDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTP---VVLELGGKSPVVVDSDTDLKVTVRRI 240 (484)
T ss_pred CCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCc---EEEecCCCCeEEEcCCCCHHHHHHHH
Confidence 999999999984 455677776 8999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHh-hccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEe
Q 009516 325 LAAKF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 403 (533)
Q Consensus 325 ~~~~f-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~ 403 (533)
++++| .|+||.|++++|+|||++++|+|+++|.++++++++|+|++ ++++||++++.+++++.++|+++ .+|+++++
T Consensus 241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~ 318 (484)
T PLN02174 241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY 318 (484)
T ss_pred HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence 99999 59999999999999999999999999999999999999988 89999999999999999999997 78999999
Q ss_pred CCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccee
Q 009516 404 GGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 483 (533)
Q Consensus 404 gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G 483 (533)
||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 319 GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG 397 (484)
T PLN02174 319 GGEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAG 397 (484)
T ss_pred CCCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcc
Confidence 99764 35799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCCC--CCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 484 LVGVNEGLIST--EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 484 ~V~iN~~~~~~--~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+||||++.... +.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 398 ~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 398 GIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred eEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 99999876543 6789999999999999999999999999999876
|
|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-96 Score=786.87 Aligned_cols=447 Identities=44% Similarity=0.710 Sum_probs=425.9
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHH
Q 009516 73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152 (533)
Q Consensus 73 ~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E 152 (533)
+++||+||+++++++.++.+|++++++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 81 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARVE 81 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCC----CCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCC
Q 009516 153 VDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228 (533)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~ 228 (533)
+..+++.++|+++.+++..+...+... .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 82 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~ 161 (453)
T cd07094 82 VDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASK 161 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999998887665443322 2456778899999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCc
Q 009516 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAP 308 (533)
Q Consensus 229 tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~ 308 (533)
+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|++.+ .++| +++|+|||||
T Consensus 162 ~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~---~~lelGGk~~ 236 (453)
T cd07094 162 TPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKR---IALELGGNAP 236 (453)
T ss_pred chHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCc---eEEecCCCCc
Confidence 9999999999999999999999999997778899999999999999999999999999987 5677 9999999999
Q ss_pred EEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHH
Q 009516 309 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 388 (533)
Q Consensus 309 ~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~ 388 (533)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 237 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~ 316 (453)
T cd07094 237 VIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVE 316 (453)
T ss_pred eEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 389 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 389 ~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
+++++|+++|+++++||... ++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 317 ~~i~~a~~~Ga~v~~gg~~~---g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~ 393 (453)
T cd07094 317 RWVEEAVEAGARLLCGGERD---GALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTR 393 (453)
T ss_pred HHHHHHHHCCCEEEeCccCC---CeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECC
Confidence 99999999999999998653 689999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|.+++.++++++++|+||||++... .+.+||||+|+||+|+++|++|+++|++.|+|++
T Consensus 394 d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 394 DLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred CHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEeC
Confidence 9999999999999999999998654 4689999999999999999999999999999863
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-96 Score=784.29 Aligned_cols=446 Identities=43% Similarity=0.651 Sum_probs=423.9
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (533)
++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHH
Q 009516 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (533)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~ 233 (533)
..+++.++++++... .+...+. .++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEVIED-DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhh--cCccccC-CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999999998763 2222222 2356778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEcc
Q 009516 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313 (533)
Q Consensus 234 ~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~ 313 (533)
..+++++.++ +|+|++|+++++ .+.++.|+.|++++.|+||||+.+|+.|++.+++++|| +++|+|||||+||++
T Consensus 158 ~~l~~~~~~~-lP~g~~~~v~g~-~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~---~~lElGG~~p~iV~~ 232 (446)
T cd07106 158 LKLGELAQEV-LPPGVLNVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKR---VTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHHHHHHh-CCcCeEEEeeCC-hhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCe---eEEecCCCCeeEECC
Confidence 9999999996 999999999984 56889999999999999999999999999999999999 999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 009516 314 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393 (533)
Q Consensus 314 dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 393 (533)
|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.+++++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~ 312 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED 312 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHH
Q 009516 394 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473 (533)
Q Consensus 394 a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~ 473 (533)
+..+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 392 (446)
T cd07106 313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA 392 (446)
T ss_pred HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99999999999976533578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 474 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 474 ~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
.++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|++
T Consensus 393 ~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~~ 446 (446)
T cd07106 393 EAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVINI 446 (446)
T ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEeC
Confidence 999999999999999988777889999999999999999999999999999863
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-96 Score=785.07 Aligned_cols=449 Identities=33% Similarity=0.519 Sum_probs=427.6
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHH
Q 009516 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 154 (533)
Q Consensus 75 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~ 154 (533)
+||+||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHH
Q 009516 155 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234 (533)
Q Consensus 155 ~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~ 234 (533)
.+++.++|++..+++..+........+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999999888765543222223556788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccC
Q 009516 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDD 314 (533)
Q Consensus 235 ~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~d 314 (533)
.|.+++.++|+|+|++|++++++ +.+..|+.|++|+.|+||||+++|+.|++.++++++| +++|+|||||+||++|
T Consensus 161 ~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~---v~lelgG~~~~iV~~d 236 (452)
T cd07102 161 RFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIK---VGLELGGKDPAYVRPD 236 (452)
T ss_pred HHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc---EEEECCCCCceEEcCC
Confidence 99999999999999999999966 7889999999999999999999999999999888888 9999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHH
Q 009516 315 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 394 (533)
Q Consensus 315 Ad~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a 394 (533)
||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++++++
T Consensus 237 ADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a 316 (452)
T cd07102 237 ADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADA 316 (452)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009516 395 VSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471 (533)
Q Consensus 395 ~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 471 (533)
+.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 317 ~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 396 (452)
T cd07102 317 IAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIA 396 (452)
T ss_pred HhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 999999999997532 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 472 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 472 ~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
++.++++++++|+||||++....+..||||+|+||+|+++|++++++||+.|++++
T Consensus 397 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 452 (452)
T cd07102 397 RAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYHL 452 (452)
T ss_pred HHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEeC
Confidence 99999999999999999987777789999999999999999999999999999863
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-96 Score=786.13 Aligned_cols=466 Identities=39% Similarity=0.609 Sum_probs=441.3
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccC-CHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKL-TAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~-~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+. +++++++||+||+++++++.++.+|+++++++|++|++.|+.+ +.++|.++|+++++.|++++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999864 6899999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCC----CCceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
|++++++|+|||..++..|+..+++.++|+++..+++.+...+... .+...+.+++|+|||++|+|||||+...++
T Consensus 81 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (473)
T cd07082 81 VANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS 160 (473)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence 9999999999999999999999999999999998887665443221 355678999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.++++.|+.|++++.|+||||+++|+.|++.+
T Consensus 161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 240 (473)
T cd07082 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQH 240 (473)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999987
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
+ ++| +++|+||+||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 241 ~--~~~---~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~ 315 (473)
T cd07082 241 P--MKR---LVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPW 315 (473)
T ss_pred C--CCc---EEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 6 677 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++++||++++.+++++.+++++++.+|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 316 ~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 393 (473)
T cd07082 316 DNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEE 393 (473)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHH
Confidence 999999999999999999999999999999999999764 379999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~-~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+|+++|+++|||+++|||+|.+++.++++++++|+||||++.... +.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 394 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~~ 473 (473)
T cd07082 394 AIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN 473 (473)
T ss_pred HHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEEC
Confidence 999999999999999999999999999999999999999976543 4689999999999999999999999999999763
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-96 Score=785.24 Aligned_cols=458 Identities=30% Similarity=0.447 Sum_probs=427.0
Q ss_pred CCccccceecCEEeeCCCCCeEEeecCCCC-CEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHH
Q 009516 51 GLLRTQGLIGGKWIDAYDGKTLEVHNPATG-EVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA 129 (533)
Q Consensus 51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg-~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~ 129 (533)
.+++.++||||+|+. ++.+++++||.|+ +++++++.++.+|++.|+++|++||+.|+.++..+|.++|+++++.|++
T Consensus 34 ~~~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~ 111 (500)
T TIGR01238 34 KTWQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLEL 111 (500)
T ss_pred CceecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 566789999999987 4788999999996 8999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 130 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 130 ~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
++++|++++++|+|||+.+++.|+..+++.++||++..+...+. ..++|+|||++|+|||||+...++
T Consensus 112 ~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~------------~~~~P~GVV~~I~pwN~P~~~~~~ 179 (500)
T TIGR01238 112 HMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------------FSVESRGVFVCISPWNFPLAIFTG 179 (500)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc------------eeccCcceEEEECCCchHHHHHHH
Confidence 99999999999999999999999999999999999987654221 368999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+.++.|+.|++++.|+||||+.+|+.|++.+
T Consensus 180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~a 259 (500)
T TIGR01238 180 QISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTL 259 (500)
T ss_pred HHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987668899999999999999999999999999999
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
+++++..+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+
T Consensus 260 a~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~ 339 (500)
T TIGR01238 260 AQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH 339 (500)
T ss_pred hhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCC
Confidence 98763223499999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcc---cCCCCceeecEEeccCCCCCcccccccccceEEEEeeC-
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK- 445 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~---~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~- 445 (533)
++++++||++++.++++++++++++++.|++++.++.. ...+|+|++|||+.+ ++|.+++||+||||++|++|+
T Consensus 340 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~ 417 (500)
T TIGR01238 340 LLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKA 417 (500)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCC
Confidence 99999999999999999999999999999998754321 113579999999984 688899999999999999998
Q ss_pred -CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCC--CCCCccCcCCCCCC-CCChHHHHHhhhe
Q 009516 446 -TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLE 521 (533)
Q Consensus 446 -~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~--~~~PfGG~~~SG~G-~~gg~~~l~~~~~ 521 (533)
++||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... +.+||||+|.||+| +++|++++++|++
T Consensus 418 ~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~ 497 (500)
T TIGR01238 418 RELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQ 497 (500)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999876532 45799999999999 8999999999999
Q ss_pred eeE
Q 009516 522 IKY 524 (533)
Q Consensus 522 ~k~ 524 (533)
.|+
T Consensus 498 ~k~ 500 (500)
T TIGR01238 498 VQY 500 (500)
T ss_pred hcC
Confidence 884
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-96 Score=781.84 Aligned_cols=451 Identities=45% Similarity=0.727 Sum_probs=429.7
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (533)
++||.||+++++++.++.+|++.++++|++|++ .|+.++.++|.++|++++++|.+++++|++++++|+|||+.+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999997 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchH
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~ 231 (533)
|+..+++.++||+.+.++..+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999998887765544443324566789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEE
Q 009516 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311 (533)
Q Consensus 232 ~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV 311 (533)
++..|+++|.++|+|+|++|++++++.+.++.|+.|+++++|+||||+.+|+.+++.+++++|| +++|+|||||+||
T Consensus 161 ~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~---~~lelgG~~~~iV 237 (457)
T cd07114 161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAP---VTLELGGKSPNIV 237 (457)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCe---EEEecCCCCeeEE
Confidence 9999999999999999999999997777899999999999999999999999999999999998 9999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHH
Q 009516 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391 (533)
Q Consensus 312 ~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 391 (533)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+.+++.+++
T Consensus 238 ~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 317 (457)
T cd07114 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYV 317 (457)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEc
Q 009516 392 EDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467 (533)
Q Consensus 392 ~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s 467 (533)
++++++|+++++||.... ..|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+++|||
T Consensus 318 ~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift 397 (457)
T cd07114 318 ARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWT 397 (457)
T ss_pred HHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEEC
Confidence 999999999999997642 2478999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 468 ~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
+|.+.+.++++++++|+|+||+.....+.+||||+|+||+|+++|.+++++||+.|+|++
T Consensus 398 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 398 RDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457 (457)
T ss_pred CCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 999999999999999999999877777789999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-96 Score=811.90 Aligned_cols=464 Identities=26% Similarity=0.364 Sum_probs=421.2
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
..++||||+|+.+ ++++++++||.||+++++++.++ +|+++|+++|++| ++.|+.++..+|+++|++++++|+++++
T Consensus 4 ~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (675)
T PRK11563 4 KLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKE 81 (675)
T ss_pred cccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4468999999986 56789999999999999999987 6999999999998 7999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHh--------CcccCCCCCC-ceeEEEeeec-eEEEEEcCCCc
Q 009516 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPWNF 202 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~I~p~N~ 202 (533)
+|++ +++|+|||+.+++.|+..+++.++||+.++++.. +...+...++ ...+..++|+ |||++|+||||
T Consensus 82 ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNf 160 (675)
T PRK11563 82 ELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNF 160 (675)
T ss_pred HHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCch
Confidence 9998 5899999999999999999999999999886643 3332222112 1246788997 99999999999
Q ss_pred chHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHH
Q 009516 203 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281 (533)
Q Consensus 203 P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~ 281 (533)
|+.++++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+ .+..++++++|+||||+++
T Consensus 161 P~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~~---~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 161 PVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAGD---LLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred HHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHHH---HhhcCCCCCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999 999999999985332 3333467999999999999
Q ss_pred HHHHHHH--hhcCccccceeeecCCCCCcEEEccCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHH
Q 009516 282 GKKLMAG--AAGTVKKVCRVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 354 (533)
Q Consensus 282 g~~i~~~--~~~~~k~~~~~~lElgG~~~~iV~~dAd-----~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~ 354 (533)
|+.|++. +++++|| +++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+|||+++||+|++
T Consensus 238 G~~i~~~~~a~~~~~~---~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~ 314 (675)
T PRK11563 238 AQKLRAHPNVVANSVP---FTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIE 314 (675)
T ss_pred HHHHHhhhhhhhCCce---EEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHH
Confidence 9999985 4578888 999999999999999995 99999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCccc-------CCCCceeecEEeccCCC--
Q 009516 355 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKS-- 425 (533)
Q Consensus 355 ~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~~~~~~Ptvl~~~~~-- 425 (533)
+|+++++++++|+|+++++++||++++.+++++.++|++|+++ |++++||... ...|+|++|||+.++++
T Consensus 315 ~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~ 393 (675)
T PRK11563 315 ALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLE 393 (675)
T ss_pred HHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchh
Confidence 9999999999999999999999999999999999999999999 9999999531 12479999999999998
Q ss_pred CCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc--eeEEEECCCCC--------C-C
Q 009516 426 EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI--------S-T 494 (533)
Q Consensus 426 ~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~V~iN~~~~--------~-~ 494 (533)
++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++ +|+||||..+. . .
T Consensus 394 ~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~ 473 (675)
T PRK11563 394 APAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPL 473 (675)
T ss_pred hhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999997 99999997521 1 2
Q ss_pred CCCCccCcCCCCCCCC-ChHHHHHhhheeeEEEE
Q 009516 495 EVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 495 ~~~PfGG~~~SG~G~~-gg~~~l~~~~~~k~v~~ 527 (533)
+.+||||+|.||+|++ +|.+++++|++.|+|..
T Consensus 474 ~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 474 PQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred cCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 5789999999999999 57999999999999865
|
|
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-95 Score=779.81 Aligned_cols=447 Identities=41% Similarity=0.660 Sum_probs=422.4
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH
Q 009516 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (533)
Q Consensus 72 ~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (533)
++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCC
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (533)
|+..++..++|+++.+.+..+...+.. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999998877655433221 1345667889999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCC
Q 009516 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307 (533)
Q Consensus 228 ~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~ 307 (533)
.+|+++..+++++.++|+|+|++|+++++ .+.+..|+.|++++.|+||||+.+|+.|++.++. +| +++|+||||
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~---v~lelgG~~ 234 (452)
T cd07147 161 RTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KK---VVLELGGNA 234 (452)
T ss_pred CCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--Cc---eEeecCCCC
Confidence 99999999999999999999999999985 4678999999999999999999999999998763 56 999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHH
Q 009516 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 387 (533)
Q Consensus 308 ~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~ 387 (533)
|+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 235 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 314 (452)
T cd07147 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERV 314 (452)
T ss_pred cEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEc
Q 009516 388 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467 (533)
Q Consensus 388 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s 467 (533)
.+++++++++|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||
T Consensus 315 ~~~i~~a~~~Ga~~l~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t 391 (452)
T cd07147 315 EGWVNEAVDAGAKLLTGGKRD---GALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFT 391 (452)
T ss_pred HHHHHHHHHCCCEEEecCCcC---CEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999999999763 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 468 NNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 468 ~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
+|.+++.++++++++|+||||+.... .+.+||||+|+||+|+++|++|+++||+.|+|++
T Consensus 392 ~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 392 RDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 99999999999999999999986653 4678999999999999999999999999999875
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-95 Score=777.40 Aligned_cols=449 Identities=44% Similarity=0.685 Sum_probs=425.9
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GE 152 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~E 152 (533)
++||.||+++++++.++.+|++++++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998775 59
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHH
Q 009516 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (533)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~ 232 (533)
+..+++.+++++..++.+.+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999999988877655433222334567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEc
Q 009516 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312 (533)
Q Consensus 233 ~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~ 312 (533)
+..+.+++.+ |+|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.+++++|| +++|+|||||+||+
T Consensus 161 ~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~---~~lelgG~~p~iV~ 236 (450)
T cd07092 161 TLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKR---VHLELGGKAPVIVF 236 (450)
T ss_pred HHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc---EEEECCCCCeeEEC
Confidence 9999999999 9999999999987777889999999999999999999999999999999999 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 009516 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392 (533)
Q Consensus 313 ~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 392 (533)
+|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++++.++++
T Consensus 237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~ 316 (450)
T cd07092 237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE 316 (450)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHH
Q 009516 393 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472 (533)
Q Consensus 393 ~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 472 (533)
++. +|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++
T Consensus 317 ~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~ 395 (450)
T cd07092 317 RAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGR 395 (450)
T ss_pred HHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 998 9999999997653457999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 473 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 473 ~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
+.++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|++
T Consensus 396 ~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 450 (450)
T cd07092 396 AMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450 (450)
T ss_pred HHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEeC
Confidence 9999999999999999987777889999999999999999999999999999853
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-95 Score=774.40 Aligned_cols=440 Identities=39% Similarity=0.617 Sum_probs=419.0
Q ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHH
Q 009516 80 GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159 (533)
Q Consensus 80 g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~ 159 (533)
|+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHH-HHHHH
Q 009516 160 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAE 238 (533)
Q Consensus 160 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~-~~l~~ 238 (533)
+++++.......+...+.. .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..+.+
T Consensus 81 l~~~~~~~~~~~~~~~~~~-~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~ 159 (443)
T cd07152 81 LHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR 159 (443)
T ss_pred HHHHHHhHHHhCCcccccc-CCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence 9999988766555544432 456678899999999999999999999999999999999999999999999996 78999
Q ss_pred HHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHH
Q 009516 239 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLN 318 (533)
Q Consensus 239 ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d 318 (533)
++.++|+|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.+++++|| +++|+|||||+||++|||+|
T Consensus 160 ~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~---~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 160 LFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKK---VSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCc---EEEECCCCCeEEECCCCCHH
Confidence 99999999999999998 567889999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCC
Q 009516 319 VAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG 398 (533)
Q Consensus 319 ~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G 398 (533)
.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.+++++++.+|
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHh
Q 009516 399 AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 478 (533)
Q Consensus 399 a~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~ 478 (533)
+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||+|.+++.++++
T Consensus 316 a~vl~gg~~~---g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 316 ARLEAGGTYD---GLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred CEEEeccCcC---CEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 9999999753 6899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceeEEEECCCCCCC-CCCCccCcCCCCCC-CCChHHHHHhhheeeEEEE
Q 009516 479 ALEYGLVGVNEGLIST-EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 479 ~l~~G~V~iN~~~~~~-~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k~v~~ 527 (533)
++++|+||||++.... +.+||||+|.||+| +++|++++++||+.|++++
T Consensus 393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence 9999999999877654 57999999999999 8899999999999999864
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-95 Score=776.11 Aligned_cols=450 Identities=64% Similarity=1.031 Sum_probs=432.5
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (533)
++||.||+++++++.++.+|++.+++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHH
Q 009516 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (533)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~ 233 (533)
..+++.++|++..+++..+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999999998877766555444567788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEcc
Q 009516 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313 (533)
Q Consensus 234 ~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~ 313 (533)
..+.++|+++|+|+|++|++++++.+.++.|+.|+++++|+||||+.+|+.|.+.+++++|| +++|+|||||+||++
T Consensus 161 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~---~~lelgG~~~~iV~~ 237 (451)
T cd07103 161 LALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKR---VSLELGGNAPFIVFD 237 (451)
T ss_pred HHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCc---EEEECCCCCeEEECC
Confidence 99999999999999999999997778889999999999999999999999999999999999 999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 009516 314 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393 (533)
Q Consensus 314 dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 393 (533)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++++||++++.+++++.+++++
T Consensus 238 dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~ 317 (451)
T cd07103 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVED 317 (451)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHH
Q 009516 394 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473 (533)
Q Consensus 394 a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~ 473 (533)
++.+|+++++||.....+|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 318 a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 397 (451)
T cd07103 318 AVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARA 397 (451)
T ss_pred HHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99999999999976533578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 474 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 474 ~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
.++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|+
T Consensus 398 ~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 398 WRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999998877788999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-95 Score=775.92 Aligned_cols=447 Identities=41% Similarity=0.642 Sum_probs=424.0
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHH
Q 009516 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 154 (533)
Q Consensus 75 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~ 154 (533)
+||+||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCcc-cCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchH
Q 009516 155 YGAKFIEFYAEEAKRVYGEI-IPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231 (533)
Q Consensus 155 ~~~~~l~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~ 231 (533)
.+++.++|+++.+.+..+.. .+.. .++...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999999987765432 2211 24567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEE
Q 009516 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311 (533)
Q Consensus 232 ~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV 311 (533)
++..|.+++.++|+|+|++|+++|++ +.+..|+.| ++++|+||||+++|+.|++.+++++|| +++|+|||||+||
T Consensus 161 ~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~---~~lelgG~~p~iV 235 (453)
T cd07099 161 VGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIP---VVLELGGKDPMIV 235 (453)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCe---EEEECCCCCeEEE
Confidence 99999999999999999999999965 788899987 599999999999999999999999888 9999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHH
Q 009516 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391 (533)
Q Consensus 312 ~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 391 (533)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.|+++++||++++.+++++.+++
T Consensus 236 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i 315 (453)
T cd07099 236 LADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHV 315 (453)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009516 392 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471 (533)
Q Consensus 392 ~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 471 (533)
++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||+|+++|+++|||++||||+|.+
T Consensus 316 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 395 (453)
T cd07099 316 DDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLA 395 (453)
T ss_pred HHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 99999999999999764235789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 472 RTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 472 ~~~~~a~~l~~G~V~iN~~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+++++++++++|+||||+... ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 396 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 396 RAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 999999999999999998754 3468999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-95 Score=776.81 Aligned_cols=449 Identities=42% Similarity=0.666 Sum_probs=425.9
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-HHHhHH
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL-KEAVGE 152 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~E 152 (533)
++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||+ .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHH
Q 009516 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (533)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~ 232 (533)
+..+++.++|+++....+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 99999999999998877666554432 34566789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEc
Q 009516 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312 (533)
Q Consensus 233 ~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~ 312 (533)
+..+.+++.++ +|+|++|+++|++.+.++.|+.|+++++|+||||+.+|+.|++.+++++|| +++|+|||||+||+
T Consensus 160 ~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~---~~lelgG~~~~iV~ 235 (457)
T cd07108 160 VLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIP---VSLELGGKSPMIVF 235 (457)
T ss_pred HHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCe---EEEECCCCCeeEEC
Confidence 99999999986 999999999987778899999999999999999999999999999999988 99999999999999
Q ss_pred cCCCHHHHHHHHHHH-HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHH
Q 009516 313 DDADLNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391 (533)
Q Consensus 313 ~dAd~d~aa~~i~~~-~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 391 (533)
+|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.+++++.+++
T Consensus 236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i 315 (457)
T cd07108 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYI 315 (457)
T ss_pred CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999 5999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-CCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEE
Q 009516 392 EDAVS-KGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 466 (533)
Q Consensus 392 ~~a~~-~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~ 466 (533)
+++++ +|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 316 ~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vf 395 (457)
T cd07108 316 DLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVW 395 (457)
T ss_pred HHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEE
Confidence 99998 9999999997642 357999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHH-HHhhheeeEEEE
Q 009516 467 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYG-MDEFLEIKYVCL 527 (533)
Q Consensus 467 s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~-l~~~~~~k~v~~ 527 (533)
|+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.++ +++||+.|+|++
T Consensus 396 t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~~ 457 (457)
T cd07108 396 TRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVNI 457 (457)
T ss_pred cCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEeC
Confidence 9999999999999999999999987777789999999999999999866 799999999863
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-95 Score=771.48 Aligned_cols=444 Identities=43% Similarity=0.642 Sum_probs=418.3
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHH
Q 009516 73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152 (533)
Q Consensus 73 ~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E 152 (533)
+++||+||+++++++.++.+|++.++++|+++ |+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 47899999999999999999999999998864 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCC
Q 009516 153 VDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228 (533)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~ 228 (533)
+..+++.++||++.+....+...+.. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999998877655443321 13455678999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCc
Q 009516 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAP 308 (533)
Q Consensus 229 tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~ 308 (533)
+|+++..+.+++.++|+|+|++|++++++.++++.|+.|++++.|+||||+.+|+.|++.++ .++ +++|+|||||
T Consensus 159 ~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~---~~lElGG~~p 233 (451)
T cd07146 159 TPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKR---QLLELGGNDP 233 (451)
T ss_pred chHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCc---eeeecCCCce
Confidence 99999999999999999999999999977788999999999999999999999999998775 567 9999999999
Q ss_pred EEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHH
Q 009516 309 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 388 (533)
Q Consensus 309 ~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~ 388 (533)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||++++.++++++
T Consensus 234 ~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~ 313 (451)
T cd07146 234 LIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIE 313 (451)
T ss_pred EEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 389 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 389 ~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||+
T Consensus 314 ~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~ 390 (451)
T cd07146 314 NRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTN 390 (451)
T ss_pred HHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECC
Confidence 9999999999999999965 3689999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCC-CCCChHHHHHhhheeeEEEE
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGL-GREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~-G~~gg~~~l~~~~~~k~v~~ 527 (533)
|.++++++++++++|+||||+... ..+.+||||+|+||+ |+++|++|+++||+.|+|++
T Consensus 391 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~~ 451 (451)
T cd07146 391 DLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL 451 (451)
T ss_pred CHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEeC
Confidence 999999999999999999998654 346799999999995 89999999999999999863
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-94 Score=819.69 Aligned_cols=468 Identities=30% Similarity=0.462 Sum_probs=436.5
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCCCC-EEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHh
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGE-VIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~-~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (533)
.+....+|+| ++.+++++||+|++ ++++++.++.+|++.|+++|++||+.|+.++.++|+++|++++++|+++
T Consensus 550 ~~~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~ 623 (1038)
T PRK11904 550 QWQAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEAN 623 (1038)
T ss_pred CceecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence 3456678888 36789999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcc--cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHH
Q 009516 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI--IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (533)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 208 (533)
+++|+.++++|+|||+.++..|+.+++++|+||+..+++..+.. .+.. .+..+..+++|+|||++|+|||||+.+++
T Consensus 624 ~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~-~ge~n~~~~~P~GVv~~IsPwNfPlai~~ 702 (1038)
T PRK11904 624 RAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGP-TGESNELRLHGRGVFVCISPWNFPLAIFL 702 (1038)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCC-CCceeEEEEecceEEEEECCCccHHHHHH
Confidence 99999999999999999999999999999999999998876542 3332 36788999999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
+++++||++||+||+|||++||+++..+.++++++|+|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|.+.
T Consensus 703 ~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~ 782 (1038)
T PRK11904 703 GQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRT 782 (1038)
T ss_pred HHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCC
Q 009516 289 AAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 368 (533)
Q Consensus 289 ~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 368 (533)
++.+..+.+|+++|+|||||+||++|||+|+|++.+++|+|.++||+|+|++|+|||++++|+|+++|+++++++++|+|
T Consensus 783 ~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp 862 (1038)
T PRK11904 783 LAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDP 862 (1038)
T ss_pred HhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCc
Confidence 88764444559999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeC-
Q 009516 369 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK- 445 (533)
Q Consensus 369 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~- 445 (533)
.++++++||+|++.+++++.++|+++.+ |+++++||..++ ..|+|+.|||+.. +++.+++||+||||++|++|+
T Consensus 863 ~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~ 939 (1038)
T PRK11904 863 RLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKA 939 (1038)
T ss_pred ccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCC
Confidence 9999999999999999999999999766 899999997653 2489999999964 677889999999999999998
Q ss_pred -CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCC--CCCCccCcCCCCCC-CCChHHHHHhhhe
Q 009516 446 -TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLE 521 (533)
Q Consensus 446 -~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~--~~~PfGG~~~SG~G-~~gg~~~l~~~~~ 521 (533)
++||+|+++|+++|||+++|||+|.+++.++++++++|+||||+...+. ..+||||+|.||+| +.||+++|++|++
T Consensus 940 ~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~ 1019 (1038)
T PRK11904 940 SDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFAT 1019 (1038)
T ss_pred CCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhc
Confidence 6899999999999999999999999999999999999999999977654 35799999999999 5799999999999
Q ss_pred eeEEEEec
Q 009516 522 IKYVCLGD 529 (533)
Q Consensus 522 ~k~v~~~~ 529 (533)
.|+|+++.
T Consensus 1020 ~ktv~~~~ 1027 (1038)
T PRK11904 1020 EKTVTVNT 1027 (1038)
T ss_pred eEEEEEcc
Confidence 99998864
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-94 Score=764.64 Aligned_cols=428 Identities=43% Similarity=0.667 Sum_probs=406.8
Q ss_pred HHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCc
Q 009516 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173 (533)
Q Consensus 94 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~ 173 (533)
++.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++||+..+++..+.
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999998876543
Q ss_pred -ccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceec
Q 009516 174 -IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252 (533)
Q Consensus 174 -~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~ 252 (533)
..+. ++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+
T Consensus 81 ~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~ 158 (429)
T cd07100 81 EPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQN 158 (429)
T ss_pred eeccC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEE
Confidence 2332 2456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhcc
Q 009516 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 332 (533)
Q Consensus 253 v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~ 332 (533)
+++++ +.+..|+.|+++++|.||||+++|+.|++.+++++|| +++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 159 v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~---~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 159 LLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKK---SVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred EeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcc---eEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 99855 5678999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCC
Q 009516 333 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 412 (533)
Q Consensus 333 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~ 412 (533)
||.|++++|||||+++||+|+++|.++++++++|+|+|+++++||++++.+++++.+++++++++|+++++||...+..|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997643347
Q ss_pred ceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC
Q 009516 413 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 492 (533)
Q Consensus 413 ~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~ 492 (533)
+|++|||+.+++++|++++||+||||++|++|+|.||+|+++|+++|||+++|||+|.+++.++++++++|+||||++..
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 394 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK 394 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 493 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 493 ~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
..+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 395 ~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 429 (429)
T cd07100 395 SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVWV 429 (429)
T ss_pred CCCCCCcCCccccccCCcchHHHHHHhcceeEEeC
Confidence 77789999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-94 Score=769.18 Aligned_cols=450 Identities=34% Similarity=0.552 Sum_probs=420.2
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHH
Q 009516 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEV 153 (533)
Q Consensus 75 ~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev 153 (533)
+||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|.+++++|++++++|+|||+.+++ .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999996 599
Q ss_pred HHHHHHHHHHHHHHHHHhCc-ccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCch
Q 009516 154 DYGAKFIEFYAEEAKRVYGE-IIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230 (533)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp 230 (533)
..+++.++|++..+++.... ..+.. ..+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999999887664332 22221 1234567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH----HHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCC
Q 009516 231 LTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGN 306 (533)
Q Consensus 231 ~~~~~l~~l----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~ 306 (533)
+++..++++ |.++|+|+|++|+|++++ +.++.|+.|++|+.|.||||+.+|+.|++.+++++|| +++|+|||
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~---~~lelgG~ 236 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTP---VVLELGGK 236 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCe---EEEECCCC
Confidence 999876655 468999999999999965 7899999999999999999999999999999999999 99999999
Q ss_pred CcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHH
Q 009516 307 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 386 (533)
Q Consensus 307 ~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~ 386 (533)
||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~ 316 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR 316 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcE
Q 009516 387 VETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 462 (533)
Q Consensus 387 ~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~ 462 (533)
+.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+
T Consensus 317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLs 396 (465)
T cd07098 317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLG 396 (465)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999986532 24799999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 463 AYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 463 a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++|||+|.+++.++++++++|+||||.+.. ..+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 397 a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 397 ASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 999999999999999999999999998653 246899999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-93 Score=763.44 Aligned_cols=450 Identities=48% Similarity=0.767 Sum_probs=428.0
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-H
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-E 152 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-E 152 (533)
++||+||+++++++.++.+|++++++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. |
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 369999999999999999999999999999999999999999999999999999999999999999999999998865 9
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHH
Q 009516 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (533)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~ 232 (533)
+..+++.++||++...+..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYPQD-GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCccccCC-CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 99999999999998876544433332 35677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEc
Q 009516 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312 (533)
Q Consensus 233 ~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~ 312 (533)
+..+.+++.++|+|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.+++++|| +++|+|||||+||+
T Consensus 160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~---~~lelgG~~~~iV~ 236 (455)
T cd07093 160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKP---VSLELGGKNPNIVF 236 (455)
T ss_pred HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccc---eEeecCCCCceEEC
Confidence 999999999999999999999987778899999999999999999999999999999999999 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 009516 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392 (533)
Q Consensus 313 ~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 392 (533)
+|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+.+++.++++
T Consensus 237 ~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 316 (455)
T cd07093 237 ADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVE 316 (455)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 393 DAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 393 ~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
+++.+|+++++||.... ..++|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+++|||+
T Consensus 317 ~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~ 396 (455)
T cd07093 317 LARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTR 396 (455)
T ss_pred HHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECC
Confidence 99999999999997642 24789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|.+++.++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|++++
T Consensus 397 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07093 397 DLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455 (455)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEeC
Confidence 99999999999999999999988777789999999999999999999999999999863
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-93 Score=763.80 Aligned_cols=448 Identities=46% Similarity=0.731 Sum_probs=423.4
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH
Q 009516 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (533)
Q Consensus 72 ~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (533)
|+++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCC
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (533)
|+..+++.++|+++.+++..+...+.. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999988877655443321 1133457889999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCC
Q 009516 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307 (533)
Q Consensus 228 ~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~ 307 (533)
.+|+++..+.+++.++|+|+|++|++++++.++++.|+.|+++++|+||||+++|+.|++.++ ++| +++|+||||
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~---~~lelGGk~ 235 (453)
T cd07149 161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKK---VTLELGSNA 235 (453)
T ss_pred cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCc---eeeecCCCc
Confidence 999999999999999999999999999977778899999999999999999999999998874 677 999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHH
Q 009516 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 387 (533)
Q Consensus 308 ~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~ 387 (533)
|+||++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||++++.+.+++
T Consensus 236 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 315 (453)
T cd07149 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERI 315 (453)
T ss_pred eEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEc
Q 009516 388 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467 (533)
Q Consensus 388 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s 467 (533)
.+++++++.+|+++++||... ++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 316 ~~~i~~a~~~ga~v~~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t 392 (453)
T cd07149 316 EEWVEEAVEGGARLLTGGKRD---GAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFT 392 (453)
T ss_pred HHHHHHHHHCCCEEEeCCCCC---CeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEc
Confidence 999999999999999998653 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 468 NNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 468 ~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
+|.+++.++++++++|+||||++... .+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 393 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~~ 453 (453)
T cd07149 393 NDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVCF 453 (453)
T ss_pred CCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEeC
Confidence 99999999999999999999987653 4678999999999999999999999999999863
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-93 Score=755.21 Aligned_cols=443 Identities=23% Similarity=0.323 Sum_probs=405.0
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHh--ccCCHHHH----HHHHHHHHHHHHHh
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW--SKLTAAER----SKGLRKWYDLLMAH 130 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w--~~~~~~~R----~~iL~~~a~~l~~~ 130 (533)
+||+|+|+.+ +++++++||+||+++++++.++.+|+++|+++|++||+.| +.++..+| .++|+++++.|+++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 4799999874 5789999999999999999999999999999999999988 66779999 89999999999998
Q ss_pred --HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCccc--CCCCCCceeEEEeeeceEEEEEcCCCcchHH
Q 009516 131 --KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII--PATLPDRRLFVLKQPVGVAGAITPWNFPLAM 206 (533)
Q Consensus 131 --~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 206 (533)
.++|++++++|+|||+.+++.|+..+++.++||++...+..+... +...++...+++++|+|||++|+|||||+.+
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 499999999999999999999999999999999998877665542 3223355778999999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHH
Q 009516 207 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286 (533)
Q Consensus 207 ~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 286 (533)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+ +..|+.|+++++|+||||+.+|+.|.
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr~i~ 237 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAERLA 237 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986655 45688899999999999999999999
Q ss_pred HHhhcCccccceeeecCCCCCcEEEccCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHhhcCc
Q 009516 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLK 364 (533)
Q Consensus 287 ~~~~~~~k~~~~~~lElgG~~~~iV~~dA-d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~ 364 (533)
..++ ++ +.+|+||+||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.+++++
T Consensus 238 ~~~g---~k---~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~ 311 (489)
T cd07126 238 LELH---GK---VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRK 311 (489)
T ss_pred HHhC---CC---EEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcc
Confidence 8876 45 99999999999999999 999999999999999999999999999999995 6999999999999999
Q ss_pred cCCCCCCCcccCcccCHHHHHHHHHHHHHHHH-CCCeEEeCCcccCC----CC-ceeecEEecc------CCCCCccccc
Q 009516 365 VGDGFGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSL----GM-TFYEPTVLSN------VKSEMLVSRE 432 (533)
Q Consensus 365 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~----~~-~~~~Ptvl~~------~~~~~~~~~e 432 (533)
+|+ +++||+++.. .+++.++++++++ +|+++++||...+. ++ .|++|||+.. ++++|++++|
T Consensus 312 ~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~e 385 (489)
T cd07126 312 LED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTT 385 (489)
T ss_pred cCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhC
Confidence 874 5889999998 9999999999998 99999999976431 23 3899999952 5789999999
Q ss_pred ccccceEEEEeeCC--HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeE--EEECCCCCCCCC----CCccCcCC
Q 009516 433 EVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL--VGVNEGLISTEV----APFGGVKQ 504 (533)
Q Consensus 433 E~FGPv~~v~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~--V~iN~~~~~~~~----~PfGG~~~ 504 (533)
|+||||++|++|+| +||||+++|+++|||++||||+|.+++.++++++++|+ |+||..+.+++. .||||+|.
T Consensus 386 EiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~ 465 (489)
T cd07126 386 EVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRG 465 (489)
T ss_pred CCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcc
Confidence 99999999999999 89999999999999999999999999999999999999 668987776554 89999999
Q ss_pred CCCCCCChHH
Q 009516 505 SGLGREGSKY 514 (533)
Q Consensus 505 SG~G~~gg~~ 514 (533)
||+||++...
T Consensus 466 sg~g~~~~~~ 475 (489)
T cd07126 466 AGIGTPEAIR 475 (489)
T ss_pred cCCCCHhHHH
Confidence 9999987643
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-92 Score=742.07 Aligned_cols=406 Identities=42% Similarity=0.689 Sum_probs=386.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcC
Q 009516 120 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITP 199 (533)
Q Consensus 120 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 199 (533)
|+++++.|++++++|++++++|+|||+.+++.|+..+++.++||+++++...+...+...++...+++++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999999887766543333335567899999999999999
Q ss_pred CCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCH
Q 009516 200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 279 (533)
Q Consensus 200 ~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~ 279 (533)
||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|++.+.++.|+.|+++++|+||||+
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 160 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 160 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 009516 280 AVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 359 (533)
Q Consensus 280 ~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~ 359 (533)
.+|+.|++.+++++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++
T Consensus 161 ~~g~~v~~~aa~~~~~---~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~ 237 (409)
T PRK10090 161 SAGEKIMAAAAKNITK---VCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEA 237 (409)
T ss_pred HHHHHHHHHHHhcCCe---EEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccCCCCCC-CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccce
Q 009516 360 VKNLKVGDGFGE-GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPV 438 (533)
Q Consensus 360 ~~~~~~G~p~~~-~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv 438 (533)
++++++|+|+++ ++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||
T Consensus 238 ~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPv 317 (409)
T PRK10090 238 MQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPV 317 (409)
T ss_pred HHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCce
Confidence 999999999998 9999999999999999999999999999999999765445789999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHh
Q 009516 439 APLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE 518 (533)
Q Consensus 439 ~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~ 518 (533)
++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||++....+..||||+|+||+|+++|.+|+++
T Consensus 318 l~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~ 397 (409)
T PRK10090 318 LPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHE 397 (409)
T ss_pred EEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988766678999999999999999999999
Q ss_pred hheeeEEEEe
Q 009516 519 FLEIKYVCLG 528 (533)
Q Consensus 519 ~~~~k~v~~~ 528 (533)
||+.|+|+++
T Consensus 398 f~~~k~v~~~ 407 (409)
T PRK10090 398 YLQTQVVYLQ 407 (409)
T ss_pred hcceEEEEEe
Confidence 9999999875
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-92 Score=749.94 Aligned_cols=433 Identities=29% Similarity=0.440 Sum_probs=404.5
Q ss_pred CCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHH
Q 009516 88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEE 166 (533)
Q Consensus 88 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~ 166 (533)
.+..+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++|+++.
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999999999999999999999999999996 6999999999999998
Q ss_pred HHHHhCcc---cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHc
Q 009516 167 AKRVYGEI---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 243 (533)
Q Consensus 167 ~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~a 243 (533)
.++..+.. .+....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~ 161 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY 161 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 87765431 222123456789999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEcc---CCCHHHH
Q 009516 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD---DADLNVA 320 (533)
Q Consensus 244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~---dAd~d~a 320 (533)
+|+|++|+++| +.++++.|+.|+ ++.|+||||+++|+.|++.+++++|| +++|+|||||+||++ |||+|.|
T Consensus 162 -lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~---v~lElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 162 -LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTP---VALELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred -CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCC---EEEEecCCCeEEEccCCCCCCHHHH
Confidence 99999999998 678999999995 99999999999999999999999999 999999999999997 6999999
Q ss_pred HHHHHHHHhh-ccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCC
Q 009516 321 VNGALAAKFR-NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 399 (533)
Q Consensus 321 a~~i~~~~f~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 399 (533)
++.+++++|. |+||.|++++|+|||++++|+|+++|.++++++++|+|.++ +++||++++.+++++.+++++++.+ +
T Consensus 236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~ 313 (484)
T PLN02203 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-A 313 (484)
T ss_pred HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 9999999996 89999999999999999999999999999999999999986 6899999999999999999999887 7
Q ss_pred eEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhh
Q 009516 400 KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA 479 (533)
Q Consensus 400 ~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~ 479 (533)
++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++
T Consensus 314 ~~~~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~ 392 (484)
T PLN02203 314 SIVHGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSE 392 (484)
T ss_pred eEEeCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 899998753 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEECCCCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 480 LEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 480 l~~G~V~iN~~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+++|+||||++.. ..+.+||||+|+||+|+++|++++++||+.|+|+++.
T Consensus 393 l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 393 TSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred CCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 9999999998754 3367899999999999999999999999999998763
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-92 Score=746.61 Aligned_cols=426 Identities=35% Similarity=0.522 Sum_probs=398.9
Q ss_pred HHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhC
Q 009516 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 172 (533)
Q Consensus 93 dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~ 172 (533)
|++.+++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||+.++..|+..+++.++|++....+..+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999988877665
Q ss_pred cccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceec
Q 009516 173 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252 (533)
Q Consensus 173 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~ 252 (533)
..... .++...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus 81 ~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~ 159 (431)
T cd07095 81 ERATP-MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL 159 (431)
T ss_pred CcccC-CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence 43322 23567889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC-ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhc
Q 009516 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331 (533)
Q Consensus 253 v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~-~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~ 331 (533)
++++ .+.++.|+.|++++.|+||||+++|+.|++.++.+ .++ +++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 160 v~g~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~---~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~ 235 (431)
T cd07095 160 VQGG-RETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKI---LALEMGGNNPLVVWDVADIDAAAYLIVQSAFLT 235 (431)
T ss_pred EeCc-HHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCc---EEEECCCCCeEEECCCCCHHHHHHHHHHHHHHh
Confidence 9984 57889999999999999999999999999987654 577 999999999999999999999999999999999
Q ss_pred cCCccccCCeEEEehh-hHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC
Q 009516 332 SGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 410 (533)
Q Consensus 332 ~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 410 (533)
+||.|++++|+|||++ ++|+|+++|.++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+.
T Consensus 236 ~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~ 315 (431)
T cd07095 236 AGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVA 315 (431)
T ss_pred CCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCC
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999976444
Q ss_pred CCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCC
Q 009516 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 490 (533)
Q Consensus 411 ~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~ 490 (533)
+|+|++|||+ +++++|.+++||+||||++|++|+|+||+|+++|+++|||+++|||+|.+++.++++++++|+||||.+
T Consensus 316 ~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~ 394 (431)
T cd07095 316 GTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRP 394 (431)
T ss_pred CCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCC
Confidence 6799999999 689999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 491 LIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 491 ~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
... .+.+||||+|+||+|+++|.+++++|+ .|++
T Consensus 395 ~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~-~~~~ 429 (431)
T cd07095 395 TTGASSTAPFGGVGLSGNHRPSAYYAADYCA-YPVA 429 (431)
T ss_pred CCCCCCCCCCCCcccccCCCCChHHHHHHHh-hhhc
Confidence 653 356899999999999999999999554 4544
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-92 Score=806.69 Aligned_cols=457 Identities=29% Similarity=0.445 Sum_probs=424.3
Q ss_pred CCccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHH
Q 009516 51 GLLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA 129 (533)
Q Consensus 51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~ 129 (533)
..++...+|+|+. ..+..++++||+| ++++++++.++.+|++.|+++|++|++.|+.+|..+|+++|++++++|++
T Consensus 643 ~~~~~~p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~ 719 (1318)
T PRK11809 643 QKWQAAPMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEA 719 (1318)
T ss_pred CCcccCCcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 3455667888842 2467899999999 89999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 130 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 130 ~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
++++|+.++++|+|||+.++..|+.+++++|+||+.++++... ...++|+|||++|+|||||++++++
T Consensus 720 ~~~eL~~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~------------~~~~~PlGVV~~IsPWNFPlai~~g 787 (1318)
T PRK11809 720 QMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD------------NDTHRPLGPVVCISPWNFPLAIFTG 787 (1318)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceeecccEEEEECCCccHHHHHHH
Confidence 9999999999999999999999999999999999998765311 2468999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||++||+++..++++++++|+|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 788 ~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~a 867 (1318)
T PRK11809 788 QVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNL 867 (1318)
T ss_pred HHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hcCc---cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccC
Q 009516 290 AGTV---KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 290 ~~~~---k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 366 (533)
++++ .+.+|+++|+||+||+||++|||+|+|++.+++|+|.++||+|++.+++|||++|+|+|+++|+++++++++|
T Consensus 868 A~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vG 947 (1318)
T PRK11809 868 AGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMG 947 (1318)
T ss_pred hhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 8775 1124499999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEe
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 443 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~ 443 (533)
+|.+.++++||+|++.+.+++.++|++++.+|++++.||.... ..|+|++|||+.. +++.+++||+||||++|++
T Consensus 948 dP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~ 1025 (1318)
T PRK11809 948 NPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVR 1025 (1318)
T ss_pred CcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEE
Confidence 9999999999999999999999999999999999999875532 3489999999974 6778899999999999999
Q ss_pred eC--CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCC--CCCCccCcCCCCCCC-CChHHHHHh
Q 009516 444 FK--TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLGR-EGSKYGMDE 518 (533)
Q Consensus 444 ~~--~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~--~~~PfGG~~~SG~G~-~gg~~~l~~ 518 (533)
|+ |+||+|+++|+++|||+++|||+|.+++.++++++++|+||||+...+. ..+||||+|.||+|. .||+++++.
T Consensus 1026 ~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~ 1105 (1318)
T PRK11809 1026 YNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYR 1105 (1318)
T ss_pred eCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHH
Confidence 97 7999999999999999999999999999999999999999999977654 358999999999996 599999999
Q ss_pred hheeeE
Q 009516 519 FLEIKY 524 (533)
Q Consensus 519 ~~~~k~ 524 (533)
|++.+.
T Consensus 1106 f~~~~~ 1111 (1318)
T PRK11809 1106 LLATRP 1111 (1318)
T ss_pred HhccCC
Confidence 999873
|
|
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-91 Score=745.44 Aligned_cols=429 Identities=43% Similarity=0.704 Sum_probs=408.9
Q ss_pred HHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhC
Q 009516 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 172 (533)
Q Consensus 93 dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~ 172 (533)
|++++++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.+++++....+..+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999998877665
Q ss_pred cccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHH-HHHHHHHHHHcCCCCCcee
Q 009516 173 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT-ALAAAELALQAGIPPGVVN 251 (533)
Q Consensus 173 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~-~~~l~~ll~~aGlP~gvv~ 251 (533)
...+...++...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|++|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~ 160 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN 160 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence 555444346678899999999999999999999999999999999999999999999998 5789999999999999999
Q ss_pred cccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhc
Q 009516 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331 (533)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~ 331 (533)
++++++.++++.|+.|++++.|.||||+.+|+.|++.+++++|| +++|+|||||+||++|||++.|++.+++++|.|
T Consensus 161 ~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~---~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 237 (431)
T cd07104 161 VVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKK---VALELGGNNPLIVLDDADLDLAVSAAAFGAFLH 237 (431)
T ss_pred EeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCc---EEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 99997778899999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred cCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCC
Q 009516 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411 (533)
Q Consensus 332 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 411 (533)
+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.. .
T Consensus 238 ~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~ 314 (431)
T cd07104 238 QGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---E 314 (431)
T ss_pred CCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999865 3
Q ss_pred CceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCC
Q 009516 412 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491 (533)
Q Consensus 412 ~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~ 491 (533)
|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++.
T Consensus 315 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~ 394 (431)
T cd07104 315 GLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQT 394 (431)
T ss_pred CceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC-CCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 492 IST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 492 ~~~-~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
... +.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 395 ~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 395 VNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWITV 431 (431)
T ss_pred CCCCCCCCCCCcccccCCccchHHHHHHhhceeEEeC
Confidence 654 689999999999999999999999999999863
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-91 Score=743.22 Aligned_cols=427 Identities=41% Similarity=0.632 Sum_probs=403.2
Q ss_pred HHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhC
Q 009516 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 172 (533)
Q Consensus 93 dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~ 172 (533)
|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++.|+..+++.++|+++......+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999998876544
Q ss_pred cccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceec
Q 009516 173 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252 (533)
Q Consensus 173 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~ 252 (533)
...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~ 160 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV 160 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence 44443334556788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCC---hhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHh
Q 009516 253 VMGN---APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKF 329 (533)
Q Consensus 253 v~g~---~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f 329 (533)
++++ +.++++.|+.||+|+.|+||||+.+|+.|++.+++++|| +++|+|||||+||++|||+|.|++.+++++|
T Consensus 161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~---~~lElgGk~p~iV~~dadl~~aa~~i~~~~~ 237 (432)
T cd07105 161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKP---VLLELGGKAPAIVLEDADLDAAANAALFGAF 237 (432)
T ss_pred EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCe---EEEeCCCCCceEECCCCCHHHHHHHHHHHHH
Confidence 9974 346789999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC
Q 009516 330 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 409 (533)
Q Consensus 330 ~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 409 (533)
.|+||.|++++|+|||++++|+|+++|.++++++++| .+++||++++.+++++.+++++++++|+++++||....
T Consensus 238 ~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~ 312 (432)
T cd07105 238 LNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADE 312 (432)
T ss_pred hcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 9999999999999999999999999999999999998 68999999999999999999999999999999997653
Q ss_pred -CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEEC
Q 009516 410 -LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN 488 (533)
Q Consensus 410 -~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN 488 (533)
.+++|++|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++++++++|+||||
T Consensus 313 ~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN 392 (432)
T cd07105 313 SPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHIN 392 (432)
T ss_pred CCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEEC
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 489 EGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 489 ~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
++... .+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 393 ~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 393 GMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred CCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 97654 4679999999999999999999999999999864
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-92 Score=742.98 Aligned_cols=427 Identities=31% Similarity=0.475 Sum_probs=400.1
Q ss_pred CCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHH
Q 009516 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA 167 (533)
Q Consensus 89 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~ 167 (533)
++.+|+++|+++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++||++.+
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999997 59999999999999988
Q ss_pred HHHhCcccCCC----CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHc
Q 009516 168 KRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 243 (533)
Q Consensus 168 ~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~a 243 (533)
++......+.. .++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~- 160 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK- 160 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence 77643322111 1245678899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHH
Q 009516 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNG 323 (533)
Q Consensus 244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~ 323 (533)
|+|+|++|+++|++.+. ..|+.|+ ++.|+||||+.+|+.|++.+++++|| +++|+|||||+||++|||+|.|++.
T Consensus 161 ~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~---~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 161 YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTP---VTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCC---eEEEccCCCcEEECCCCCHHHHHHH
Confidence 69999999999866565 4699999 99999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEe
Q 009516 324 ALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 403 (533)
Q Consensus 324 i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~ 403 (533)
+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+| ++++.+||+++..+.+++.++++++ |+++++
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~ 311 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI 311 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999986 889999
Q ss_pred CCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccee
Q 009516 404 GGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 483 (533)
Q Consensus 404 gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G 483 (533)
||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||++||||+|.+++.++++++++|
T Consensus 312 gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g 390 (436)
T cd07135 312 GGEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSG 390 (436)
T ss_pred CCCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcC
Confidence 99765 35799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCC--CCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 484 LVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 484 ~V~iN~~~~~--~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+|+||+.... .+.+||||+|+||+|+++|.+++++||+.|+|.
T Consensus 391 ~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 391 GVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred eEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 9999987643 468999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-91 Score=802.86 Aligned_cols=460 Identities=30% Similarity=0.445 Sum_probs=428.3
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHh
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (533)
.+....+|+|+... +..++++||.| ++++++++.++.+++++|++.|++|++.|+.++.++|+++|++++++|+++
T Consensus 552 ~~~~~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~ 628 (1208)
T PRK11905 552 TWHAAPLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAH 628 (1208)
T ss_pred Ceeecceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHh
Confidence 34556678876442 56799999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
+++|+.++++|+||++.++..|+.+++++++||+.+++...+ ...++|+|||++|+|||||+.+++++
T Consensus 629 ~~eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~g~ 696 (1208)
T PRK11905 629 MPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFTGQ 696 (1208)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHHHH
Confidence 999999999999999999999999999999999998866432 13568999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||++||+++..++++|+++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|.+.++
T Consensus 697 i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A 776 (1208)
T PRK11905 697 IAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLA 776 (1208)
T ss_pred HHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 291 ~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
++..+.+|+++|+|||||+||++|||+|+|++.+++|+|.++||+|+|++++|||++++|+|+++|+++++++++|||.+
T Consensus 777 ~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d 856 (1208)
T PRK11905 777 KRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWR 856 (1208)
T ss_pred hhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchh
Confidence 77544455999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeC--CH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TE 447 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~--~~ 447 (533)
.++++||+|++.+++++.++|+++...|+.++.|+.... ..|+|+.|||+.. +++.+++||+||||++|++|+ ++
T Consensus 857 ~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dl 934 (1208)
T PRK11905 857 LSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADEL 934 (1208)
T ss_pred ccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCH
Confidence 999999999999999999999999999999888764432 3589999999973 678899999999999999998 69
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCC--CCCCccCcCCCCCCC-CChHHHHHhhheeeE
Q 009516 448 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLGR-EGSKYGMDEFLEIKY 524 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~--~~~PfGG~~~SG~G~-~gg~~~l~~~~~~k~ 524 (533)
||+|+++|+++|||+++|||+|.+.+.++++++++|+||||+...+. ..+||||+|.||+|+ .||+++|++|++.|+
T Consensus 935 deaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~ 1014 (1208)
T PRK11905 935 DRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAP 1014 (1208)
T ss_pred HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcce
Confidence 99999999999999999999999999999999999999999987754 358999999999996 799999999999999
Q ss_pred EEEe
Q 009516 525 VCLG 528 (533)
Q Consensus 525 v~~~ 528 (533)
++++
T Consensus 1015 v~~~ 1018 (1208)
T PRK11905 1015 TPIP 1018 (1208)
T ss_pred eecc
Confidence 9764
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-91 Score=738.75 Aligned_cols=420 Identities=30% Similarity=0.481 Sum_probs=392.7
Q ss_pred HHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCc-
Q 009516 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGE- 173 (533)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~- 173 (533)
+.+++|++||+.|+.++..+|+++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.++...+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999999999999999999999999999999999997 59999999999999988776544
Q ss_pred ccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcee
Q 009516 174 IIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (533)
Q Consensus 174 ~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~ 251 (533)
..+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~ 160 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVA 160 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEE
Confidence 22211 12456788999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred cccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhc
Q 009516 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331 (533)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~ 331 (533)
+++| +.+.+..|+.|+ |++|+||||+++|+.|++.+++++|| +++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 161 ~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~---v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 161 VVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTP---VTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred EEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCC---EEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 9998 556788899775 99999999999999999999988998 999999999999999999999999999999999
Q ss_pred cCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCC
Q 009516 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411 (533)
Q Consensus 332 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 411 (533)
+||.|++++|+|||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.+++++ +++++||... .+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~-----a~~~~gG~~~-~~ 308 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNTD-RE 308 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhc-----ceEEECCCcC-CC
Confidence 999999999999999999999999999999999999998 8999999999999999999986 3899999764 35
Q ss_pred CceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCC
Q 009516 412 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491 (533)
Q Consensus 412 ~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~ 491 (533)
|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+..
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~ 388 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTI 388 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CC--CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 492 IS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 492 ~~--~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
.. .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 389 MHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred ccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 43 36789999999999999999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-91 Score=735.96 Aligned_cols=422 Identities=30% Similarity=0.457 Sum_probs=393.6
Q ss_pred HHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009516 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (533)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~ 174 (533)
.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.++. .|+..+++.++||+..+.+..+..
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5889999999999999999999999999999999999999999999999999996 599999999999999886654331
Q ss_pred ---cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcee
Q 009516 175 ---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (533)
Q Consensus 175 ---~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~ 251 (533)
.+........++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~ 161 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIK 161 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 121122345678999999999999999999999999999999999999999999999999999999995 9999999
Q ss_pred cccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHh-h
Q 009516 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKF-R 330 (533)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f-~ 330 (533)
+++| +.+.++.|+.| ++++|+||||+.+|+.|++.+++++|| +++|+|||||+||++|||+|.|++.+++++| .
T Consensus 162 ~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~---~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 162 VIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTP---VTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred EEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCc---EEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 9998 55778899987 599999999999999999999999999 9999999999999999999999999999999 5
Q ss_pred ccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC
Q 009516 331 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 410 (533)
Q Consensus 331 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 410 (533)
|+||.|++++|+|||++++|+|+++|.++++++++|+| ++++++||++++.+++++.+++++++. |+++++||... .
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~ 313 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-E 313 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-C
Confidence 99999999999999999999999999999999999999 568999999999999999999999998 89999999763 3
Q ss_pred CCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCC
Q 009516 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 490 (533)
Q Consensus 411 ~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~ 490 (533)
+|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||+|.+++.++++++++|+||||.+
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 393 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDT 393 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC--CCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 491 LIS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 491 ~~~--~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
... .+.+||||+|+||+|+++|.+++++||+.|+|+
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 394 VVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred cccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 653 367899999999999999999999999999985
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-89 Score=734.36 Aligned_cols=431 Identities=29% Similarity=0.454 Sum_probs=400.6
Q ss_pred CCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHH
Q 009516 88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEE 166 (533)
Q Consensus 88 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~ 166 (533)
..+.+|++.+++.|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.++|+++.
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 358899999999999999999999999999999999999999999999999999999999996 4999999999999988
Q ss_pred HHHHhCcc-cC--CCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHc
Q 009516 167 AKRVYGEI-IP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 243 (533)
Q Consensus 167 ~~~~~~~~-~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~a 243 (533)
.++..... .. ........+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~ 162 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY 162 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh
Confidence 87754322 11 1112345788999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHH
Q 009516 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNG 323 (533)
Q Consensus 244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~ 323 (533)
+|+|++++++| +.+.+..|+.|+ +|.|+||||+.+|+.|+++++++++| +++|+|||||+||++|||++.|++.
T Consensus 163 -lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~p---v~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 163 -LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTP---CTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred -CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCc---EEEEcCCCCceEEcCCCCHHHHHHH
Confidence 99999999998 667888999987 99999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEe
Q 009516 324 ALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 403 (533)
Q Consensus 324 i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~ 403 (533)
+++++|.|+||.|+|++|+|||++++|+|+++|++.++++. |++.++++++||+++.++++++.++++ ++|+++++
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~ 312 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEE
Confidence 99999999999999999999999999999999999999986 777788999999999999999999996 37999999
Q ss_pred CCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccee
Q 009516 404 GGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 483 (533)
Q Consensus 404 gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G 483 (533)
||..+ .++.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus 313 gG~~~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG 391 (493)
T PTZ00381 313 GGEVD-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSG 391 (493)
T ss_pred CCCcC-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 99764 35689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 484 LVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 484 ~V~iN~~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+|+.+.
T Consensus 392 ~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 392 AVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred eEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 999998754 3468999999999999999999999999999998764
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-89 Score=726.29 Aligned_cols=422 Identities=33% Similarity=0.456 Sum_probs=391.8
Q ss_pred HHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-HHHHh-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009516 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (533)
Q Consensus 97 av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~ 174 (533)
.+++|++||+.|+.+++.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.++||++.+.+..+..
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56764 699999999999999887655432
Q ss_pred c-CC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcee
Q 009516 175 I-PA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (533)
Q Consensus 175 ~-~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~ 251 (533)
. .. ...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++++++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~ 161 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVA 161 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 1 11 112445789999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred cccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhc
Q 009516 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331 (533)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~ 331 (533)
+++| +.+.++.|+.|+ ++.|+||||+.+|+.|++.+++++|| +++|+|||||+||++|||++.|++.+++++|.|
T Consensus 162 ~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~---~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 162 VVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTP---VTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred EEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCce---EEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 9998 457888898776 99999999999999999999999998 999999999999999999999999999999999
Q ss_pred cCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--
Q 009516 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-- 409 (533)
Q Consensus 332 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-- 409 (533)
+||.|++++|+|||++++|+|+++|+++++++++|+ ++++++||++++.+++++.+++++++++|+++++||....
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~ 314 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDF 314 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCC
Confidence 999999999999999999999999999999999986 5788999999999999999999999999999999997642
Q ss_pred CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECC
Q 009516 410 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 489 (533)
Q Consensus 410 ~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~ 489 (533)
.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+||||.
T Consensus 315 ~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~ 394 (434)
T cd07133 315 AATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIND 394 (434)
T ss_pred CCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 490 GLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 490 ~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+.. ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 395 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 395 TLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 764 3468999999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-89 Score=724.63 Aligned_cols=424 Identities=31% Similarity=0.475 Sum_probs=398.0
Q ss_pred HHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009516 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (533)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~ 174 (533)
+++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++|++.......+..
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999999999996 699999999999998776544321
Q ss_pred -c--CCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcee
Q 009516 175 -I--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (533)
Q Consensus 175 -~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~ 251 (533)
. +....+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.++++++ +|+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~ 160 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVA 160 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEE
Confidence 2 11123556789999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhc
Q 009516 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331 (533)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~ 331 (533)
++++ +.+.+..|+.|+ ++.|+||||+.+|+.|++.++++++| +++|+|||||+||++|||++.|++.+++++|.+
T Consensus 161 ~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~---~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 161 VFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLAS---VTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred EEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCc---EEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 9998 457889999998 99999999999999999999988888 999999999999999999999999999999999
Q ss_pred cCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCC-CCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC
Q 009516 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 410 (533)
Q Consensus 332 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 410 (533)
+||.|++++|+|||++++|+|+++|++++++++.|+| .+.++++||++++.+.+++.+++++++++|+++++||... .
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~ 314 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-A 314 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-C
Confidence 9999999999999999999999999999999988887 8999999999999999999999999999999999999764 3
Q ss_pred CCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCC
Q 009516 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 490 (533)
Q Consensus 411 ~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~ 490 (533)
+|+|++|||+.+++++|++++||+||||++|++|+|.||+|+++|+++|||+++|||+|.+.++++++++++|+||||+.
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 394 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDV 394 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC--CCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 491 LIS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 491 ~~~--~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
... .+.+||||+|+||+|+++|++++++||+.|+|.
T Consensus 395 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 395 VLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 653 467999999999999999999999999999885
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-88 Score=717.10 Aligned_cols=421 Identities=31% Similarity=0.472 Sum_probs=389.6
Q ss_pred HHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009516 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (533)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~ 174 (533)
+|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.++|+++.++...+..
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5789999999999999999999999999999999999999999999999999996 699999999999999887765432
Q ss_pred cCCC---CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcee
Q 009516 175 IPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (533)
Q Consensus 175 ~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~ 251 (533)
.+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~ 160 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYP 160 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEE
Confidence 2211 12345788999999999999999999999999999999999999999999999999999999986 9999999
Q ss_pred cccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhc
Q 009516 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331 (533)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~ 331 (533)
++++++.+ +..|+. ++|+.|+||||+.+|+.|++.+++++|| +++|+|||||+||++|||++.|++.+++++|.|
T Consensus 161 vv~g~~~~-~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~---~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 161 VVLGGVEE-TTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTP---VTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred EEeCCHHH-HHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCc---eEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 99995444 566775 5899999999999999999999989998 999999999999999999999999999999999
Q ss_pred cCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCC
Q 009516 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411 (533)
Q Consensus 332 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 411 (533)
+||.|++++|+|||++++|+|+++|.+++++++.|+| ++++++||++++.+++++.+++++ +++++||..+ .+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~ 308 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EK 308 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CC
Confidence 9999999999999999999999999999999999988 789999999999999999999873 5899999764 35
Q ss_pred CceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCC
Q 009516 412 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491 (533)
Q Consensus 412 ~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~ 491 (533)
++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||++.
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~ 388 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTI 388 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CC--CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 492 IS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 492 ~~--~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
.. .+.+||||+|+||+|+++|.+++++|++.|+|+++.
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 389 MHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred cccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence 53 357899999999999999999999999999998763
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-87 Score=705.08 Aligned_cols=418 Identities=34% Similarity=0.532 Sum_probs=387.2
Q ss_pred HHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009516 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (533)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~ 174 (533)
.++++|++||+.|+.++..+|+++|++++++|++++++|++++++|+|||+.++. .|+..+++.++|++..+++..+..
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3889999999999999999999999999999999999999999999999988775 599999999999998877654322
Q ss_pred -c--CCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcee
Q 009516 175 -I--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (533)
Q Consensus 175 -~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~ 251 (533)
. +....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.+ |+|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~ 160 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVA 160 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEE
Confidence 1 1112344678899999999999999999999999999999999999999999999999999999999 69999999
Q ss_pred cccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhc
Q 009516 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331 (533)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~ 331 (533)
+++|+ .+.+..|+.|+ ++.|+||||+++|+.|++.+++++|| +++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 161 vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~---~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 161 VVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTP---VTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred EEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCc---eEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 99984 46688999998 99999999999999999999999999 999999999999999999999999999999999
Q ss_pred cCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCC
Q 009516 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411 (533)
Q Consensus 332 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 411 (533)
+||.|++++|||||++++|+|+++|.+.+++++.|+| ++.+++||++++.+.+++.++++++ ++++||... .+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~ 308 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KE 308 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CC
Confidence 9999999999999999999999999999999986666 5789999999999999999999864 899999764 35
Q ss_pred CceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCC
Q 009516 412 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 491 (533)
Q Consensus 412 ~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~ 491 (533)
|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||+|.+++.++++++++|+||||+..
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 388 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVL 388 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred C--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 492 I--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 492 ~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
. ..+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 389 LHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 4 3468999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-86 Score=669.54 Aligned_cols=481 Identities=29% Similarity=0.434 Sum_probs=436.0
Q ss_pred Cccccccccccccccchhhhcc------CCccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHH
Q 009516 29 TPAFSRQMSVGMKSVTDRLRDS------GLLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSA 101 (533)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A 101 (533)
.|.+|.+++++..+....++.. ..|.....++|+-+. .|+..+++||++ .+++++|..++.+|+++|++.|
T Consensus 82 ~R~NSaG~Dlsne~~la~L~~al~~~a~~~w~A~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A 159 (769)
T COG4230 82 GRVNSAGLDLSNEHRLASLSSALLASAGQKWQAAPIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAA 159 (769)
T ss_pred ccccccccCcchHHHHHHHHHHHHhhhhhhhccccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHH
Confidence 4567777777665544444321 345667789888766 478899999999 5688999999999999999999
Q ss_pred HHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCC
Q 009516 102 FDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD 181 (533)
Q Consensus 102 ~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~ 181 (533)
.+|++.|..+++.+|+.+|++++++++.+..+|..++++|.||++.++..||+++++||+||+.++++-.++
T Consensus 160 ~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~-------- 231 (769)
T COG4230 160 VAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN-------- 231 (769)
T ss_pred HhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc--------
Confidence 999999999999999999999999999999999999999999999999999999999999999998763322
Q ss_pred ceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHH
Q 009516 182 RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIG 261 (533)
Q Consensus 182 ~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~ 261 (533)
..++|+|+++||+|||||+++++.+++.||++||+|+-||+++||+.+..-+++|+++|+|++++|+++|+|..+|
T Consensus 232 ----~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvG 307 (769)
T COG4230 232 ----LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVG 307 (769)
T ss_pred ----cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccc
Confidence 3457999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCe
Q 009516 262 DALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR 341 (533)
Q Consensus 262 ~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~ 341 (533)
..|+.++++++|.||||+++++.|.+..+++-.+.+|+|.|+||.|++||+.+|--++++.+++.|+|.++||+|++.+.
T Consensus 308 a~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRv 387 (769)
T COG4230 308 AALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRV 387 (769)
T ss_pred hhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhh
Confidence 99999999999999999999999999999866667899999999999999999999999999999999999999999999
Q ss_pred EEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-CCCceeecEEe
Q 009516 342 VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVL 420 (533)
Q Consensus 342 v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl 420 (533)
+|+++++.|..+++|+..+.++++|+|..-.+++||+|+.+..+.++++|+..+..|-.+..-....+ ..|.|+.||++
T Consensus 388 LclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~ 467 (769)
T COG4230 388 LCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLI 467 (769)
T ss_pred hhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeE
Confidence 99999999999999999999999999999999999999999999999999987777654433322222 35899999999
Q ss_pred ccCCCCCcccccccccceEEEEeeC--CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCC--C
Q 009516 421 SNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE--V 496 (533)
Q Consensus 421 ~~~~~~~~~~~eE~FGPv~~v~~~~--~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~--~ 496 (533)
+. ++..-++.|+||||++|++|+ ++++.|+-+|.+.||||.+|||+..+.+.++.+++++|++|||+..++.. .
T Consensus 468 El--~~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGV 545 (769)
T COG4230 468 EL--ENLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGV 545 (769)
T ss_pred Ec--CCHHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEee
Confidence 76 445557899999999999998 67999999999999999999999999999999999999999999988654 7
Q ss_pred CCccCcCCCCCCCC-ChHHHHHhhheeeEE
Q 009516 497 APFGGVKQSGLGRE-GSKYGMDEFLEIKYV 525 (533)
Q Consensus 497 ~PfGG~~~SG~G~~-gg~~~l~~~~~~k~v 525 (533)
+||||.+.||+|.+ ||+.+|..|+..+..
T Consensus 546 QPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 546 QPFGGEGLSGTGPKAGGPLYLLRLVSERPW 575 (769)
T ss_pred ccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence 99999999999988 999999999977653
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-84 Score=687.73 Aligned_cols=415 Identities=26% Similarity=0.335 Sum_probs=378.1
Q ss_pred HHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHh--
Q 009516 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY-- 171 (533)
Q Consensus 94 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~-- 171 (533)
+++|++.|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.++|++..+++..
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 468999999999999999999999999999999999999999999999999999999999999999999998876432
Q ss_pred CcccCCC------CCCceeEEEeeeceEEEEEcCCCcchHH--HHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHH---
Q 009516 172 GEIIPAT------LPDRRLFVLKQPVGVAGAITPWNFPLAM--ITRKVGPALACGCTVVVKPSEFTPLTALAAAELA--- 240 (533)
Q Consensus 172 ~~~~~~~------~~~~~~~~~~~P~GVv~~I~p~N~P~~~--~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll--- 240 (533)
+...+.. .++...+.+++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|+++..+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 2222111 1123457899999999999999999988 5589999999999999999999999999888776
Q ss_pred -HHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc--CccccceeeecCCCCCcEEEccCC--
Q 009516 241 -LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG--TVKKVCRVSLELGGNAPCIVFDDA-- 315 (533)
Q Consensus 241 -~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~--~~k~~~~~~lElgG~~~~iV~~dA-- 315 (533)
.++|+|+|++|+|+|++.+.++.|+.|++|++|+||||+.+|+.|++.+++ ++|| +++|+|||||+||++||
T Consensus 161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p---~~lElGG~n~~iV~~da~~ 237 (454)
T cd07129 161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIP---FYAELGSVNPVFILPGALA 237 (454)
T ss_pred HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccce---eEeecCCcCcEEEeCCcch
Confidence 489999999999999776789999999999999999999999999999987 6888 99999999999999999
Q ss_pred -CHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 009516 316 -DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393 (533)
Q Consensus 316 -d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 393 (533)
|+|.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.++++++++ ||++++.+.++..+++++
T Consensus 238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999 999999999999999976 477777888888899999
Q ss_pred HHHC-CCeEEeCCcccCCCCceeecEEeccCC---CCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCC
Q 009516 394 AVSK-GAKVLLGGRRHSLGMTFYEPTVLSNVK---SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 469 (533)
Q Consensus 394 a~~~-Ga~v~~gg~~~~~~~~~~~Ptvl~~~~---~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 469 (533)
++++ |+++++||... .+|+|++|||+...+ ++|++++||+||||++|++|+|.||+|+++|+++|||+++|||+|
T Consensus 308 a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d 386 (454)
T cd07129 308 LAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEE 386 (454)
T ss_pred HHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccC
Confidence 9998 99999999764 357999999998665 689999999999999999999999999999999999999999999
Q ss_pred --HHHHHHHHhhc--ceeEEEECCCCCCC---CCCCccC-cCCCCCCCC--ChHHHHHhhhee
Q 009516 470 --LQRTWRVSEAL--EYGLVGVNEGLIST---EVAPFGG-VKQSGLGRE--GSKYGMDEFLEI 522 (533)
Q Consensus 470 --~~~~~~~a~~l--~~G~V~iN~~~~~~---~~~PfGG-~~~SG~G~~--gg~~~l~~~~~~ 522 (533)
.+++++++.+| ++|+||||++.... +.+|||| +|.||+||+ +|.+++++||++
T Consensus 387 ~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~ 449 (454)
T cd07129 387 DDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP 449 (454)
T ss_pred chHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence 89999999999 69999999876533 4899999 999999999 789999999986
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-83 Score=684.42 Aligned_cols=431 Identities=23% Similarity=0.298 Sum_probs=379.5
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH--
Q 009516 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-- 151 (533)
Q Consensus 74 v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-- 151 (533)
-+||+|++++++++.++. ++++++|++||+.|+.+++.+|.++|++++++|+++.++|++++++|+|||+.+++.
T Consensus 69 e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~g 145 (551)
T TIGR02288 69 ERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAG 145 (551)
T ss_pred ccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhcc
Confidence 389999999999999986 899999999999999999999999999999999999999999999999999999864
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhCccc---CCCCCCc---eeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEE
Q 009516 152 ---EVDYGAKFIEFYAEEAKRVYGEII---PATLPDR---RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222 (533)
Q Consensus 152 ---Ev~~~~~~l~~~a~~~~~~~~~~~---~~~~~~~---~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VV 222 (533)
++.+.++.++|+++...++.+... +....+. .....++|+|||++|+|||||+++.++++++||++||+||
T Consensus 146 kp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VV 225 (551)
T TIGR02288 146 GPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVL 225 (551)
T ss_pred ChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEE
Confidence 788899999999999887766533 2211111 1234789999999999999999999999999999999999
Q ss_pred EecCCCchHHHH----HHHHHHHHcCCCCCceecccCC-hhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccc
Q 009516 223 VKPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVC 297 (533)
Q Consensus 223 lKps~~tp~~~~----~l~~ll~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~ 297 (533)
+|||+.+|+++. .+.+++.++|+|+|++|+++++ +.++++.|+.||+|++|.||||+.+|+.|++.++ .++
T Consensus 226 lKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~-- 301 (551)
T TIGR02288 226 VKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQ-- 301 (551)
T ss_pred EECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCc--
Confidence 999999999665 5679999999999999999985 6789999999999999999999999999998876 367
Q ss_pred eeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh---------hHHHHHHHHHHHhhcCccCCC
Q 009516 298 RVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG---------IYEKFADAFSKAVKNLKVGDG 368 (533)
Q Consensus 298 ~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~G~p 368 (533)
+++|||||||+||++|||+|.+++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++ +|||
T Consensus 302 -v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp 379 (551)
T TIGR02288 302 -VYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDP 379 (551)
T ss_pred -EEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCc
Confidence 9999999999999999999999999999999999999999999999999 7999999999999999 9999
Q ss_pred CCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEee
Q 009516 369 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444 (533)
Q Consensus 369 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~ 444 (533)
.++.+++||++++.+++++ +++++.| ++++||.... .+++|++|||+....++|++++||+||||++|++|
T Consensus 380 ~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~ 454 (551)
T TIGR02288 380 ARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAV 454 (551)
T ss_pred ccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEE
Confidence 9999999999999999995 5667778 5666665421 23368899999544459999999999999999999
Q ss_pred CCHHHHHHHHHcC--CCC-cEEEEEcCCHHHHHHHHhhc----------ceeEEEECCCCCCCCCCCccCcCCCCCCCC-
Q 009516 445 KTEEEAIHMANDT--NAG-LAAYIFTNNLQRTWRVSEAL----------EYGLVGVNEGLISTEVAPFGGVKQSGLGRE- 510 (533)
Q Consensus 445 ~~~~eai~~~n~~--~~g-L~a~v~s~d~~~~~~~a~~l----------~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~- 510 (533)
+|+||+|+++|++ +|| |+++|||+|.+++.++.+++ ++|.|+||. ..||++.+.||....
T Consensus 455 ~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~------~~~~~~~~~sg~n~~a 528 (551)
T TIGR02288 455 DDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQ------SAAFSDFHGTGGNPAA 528 (551)
T ss_pred CCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEcc------CCCCCCCCCCCCCCcc
Confidence 9999999999998 566 99999999999999999999 677777775 346888888888877
Q ss_pred ChHHHHHhhheeeE
Q 009516 511 GSKYGMDEFLEIKY 524 (533)
Q Consensus 511 gg~~~l~~~~~~k~ 524 (533)
+..+.--.|...+.
T Consensus 529 ~~~~~~~~~~~~r~ 542 (551)
T TIGR02288 529 NASLSDGAFVANRF 542 (551)
T ss_pred CCcccchhhhhcce
Confidence 44556556665543
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-82 Score=672.90 Aligned_cols=429 Identities=52% Similarity=0.835 Sum_probs=407.8
Q ss_pred HHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcc
Q 009516 95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI 174 (533)
Q Consensus 95 ~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~ 174 (533)
+++++.|++|++.|+.++.++|.++|+++++.|.+++++|++++++|+|||+.+++.|+..+++.+++++..++...+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36889999999999999999999999999999999999999999999999999999999999999999998887766544
Q ss_pred cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceeccc
Q 009516 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 254 (533)
Q Consensus 175 ~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~ 254 (533)
.+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~ 160 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT 160 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 32223466788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCC
Q 009516 255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 334 (533)
Q Consensus 255 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ 334 (533)
+++.+.+..|+.|++++.|.||||..+++.|.+.++++++| +++|+||+|++||++|+|++.|++.+++++|.++||
T Consensus 161 ~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~---~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq 237 (432)
T cd07078 161 GDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKR---VTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQ 237 (432)
T ss_pred cCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCc---EEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCC
Confidence 87666889999999999999999999999999999998888 999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC-CCc
Q 009516 335 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMT 413 (533)
Q Consensus 335 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~~ 413 (533)
.|++++++|||++++|+|+++|.++++++++|+|+++++++||++++++++++.++++++.++|+++++||..... +|+
T Consensus 238 ~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~ 317 (432)
T cd07078 238 VCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGY 317 (432)
T ss_pred CccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999976532 479
Q ss_pred eeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC
Q 009516 414 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 493 (533)
Q Consensus 414 ~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~ 493 (533)
|++|||+.++++++++++||+||||++|++|+|.||+|+++|++++||+++|||+|.+.+.++++++++|+|+||+....
T Consensus 318 ~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~ 397 (432)
T cd07078 318 FVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG 397 (432)
T ss_pred EEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred -CCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 494 -TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 494 -~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
.+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 398 ~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 398 AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 788999999999999999999999999999985
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-83 Score=676.42 Aligned_cols=415 Identities=19% Similarity=0.202 Sum_probs=375.9
Q ss_pred HHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHh--C
Q 009516 95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--G 172 (533)
Q Consensus 95 ~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--~ 172 (533)
++|+++|++|++.|+.++..+|+++|+++++.|++++++|++++++|+|||+ ++..|+..+++.++||+..+.... +
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 5799999999999999999999999999999999999999999999999999 777899999999999999886541 1
Q ss_pred ccc--CCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCC-CCCc
Q 009516 173 EII--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGV 249 (533)
Q Consensus 173 ~~~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGl-P~gv 249 (533)
... .....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.++++++|+ |+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~ 160 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED 160 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence 111 1111234678899999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred eecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCC-CHHHHHHHHHHHH
Q 009516 250 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDA-DLNVAVNGALAAK 328 (533)
Q Consensus 250 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dA-d~d~aa~~i~~~~ 328 (533)
+|++++++. .+..|+.|+++++|+||||+++|+.|++.++. +| +++|+|||||+||++|| |+|.+++.+++++
T Consensus 161 ~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~---v~lElgG~~~~iV~~dadd~~~a~~~i~~~~ 234 (442)
T cd07084 161 VTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--AR---IYLELAGFNWKVLGPDAQAVDYVAWQCVQDM 234 (442)
T ss_pred eEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--Cc---EEEeccCcCcEEECCChhhHHHHHHHHHHHH
Confidence 999999765 88999999999999999999999999998764 66 99999999999999999 6999999999999
Q ss_pred hhccCCccccCCeEEEehh-hHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHC-CCeEEeCCc
Q 009516 329 FRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGR 406 (533)
Q Consensus 329 f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~ 406 (533)
|.|+||.|++++|+|||++ ++|+|+++|.++++++++| ++++||++++ ++.++++++.++ |+++++||.
T Consensus 235 ~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~ 305 (442)
T cd07084 235 TACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGK 305 (442)
T ss_pred hcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCc
Confidence 9999999999999999999 9999999999999999998 7889999765 456667777777 599999997
Q ss_pred ccC------CCCceeecEEeccCCCCC---cccccccccceEEEEeeCC--HHHHHHHHHcCCCCcEEEEEcCCHHHHHH
Q 009516 407 RHS------LGMTFYEPTVLSNVKSEM---LVSREEVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWR 475 (533)
Q Consensus 407 ~~~------~~~~~~~Ptvl~~~~~~~---~~~~eE~FGPv~~v~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~~ 475 (533)
..+ ..|+|++|||+.+++++| ++++||+||||++|++|+| ++|+|+++|+++|||+++|||+|.+++++
T Consensus 306 ~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 385 (442)
T cd07084 306 ELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQE 385 (442)
T ss_pred ccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHH
Confidence 532 247899999999999997 9999999999999999999 99999999999999999999999999999
Q ss_pred HHhhc-ceeEEEECCC-CC-CCCCCCccC-cCCCCCCCCC-hHHHHHhhheeeEE
Q 009516 476 VSEAL-EYGLVGVNEG-LI-STEVAPFGG-VKQSGLGREG-SKYGMDEFLEIKYV 525 (533)
Q Consensus 476 ~a~~l-~~G~V~iN~~-~~-~~~~~PfGG-~~~SG~G~~g-g~~~l~~~~~~k~v 525 (533)
+++++ ++|+||||+. +. ..+..|||| .|.||+|+++ |.+++++||+...+
T Consensus 386 ~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 386 LIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 99999 9999999976 33 445577766 8899999995 99999999997654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-81 Score=670.24 Aligned_cols=447 Identities=21% Similarity=0.249 Sum_probs=392.1
Q ss_pred CCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 009516 66 AYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP 145 (533)
Q Consensus 66 ~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~ 145 (533)
+.+++..+++||.|++++++++.+ |++.+|++|++|++.|+.+++.+|.++|++++++|++++++|++++++|+||+
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~ 137 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQA 137 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCC
Confidence 345788999999999999999988 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhH-----HHHHHHHHHHHHHHHHHHHhCcccCCCCCC------ceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 146 LKEAVG-----EVDYGAKFIEFYAEEAKRVYGEIIPATLPD------RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 146 ~~~a~~-----Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~------~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
+.++.. |++.+++.++|++++..+..+........+ ......++|+||+++|+|||||+++.+.++++|
T Consensus 138 ~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~A 217 (549)
T cd07127 138 FMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFAS 217 (549)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHH
Confidence 998863 899999999999998877654322110001 112347899999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHH----HHHHHHHHcCCCCCceecccCC-hhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 215 LACGCTVVVKPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~----~l~~ll~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
|++||+||+|||+.+|+++. .+.++|.++|+|+|++|+++++ +.++++.|+.||+|++|.||||+.+|+.|.+.+
T Consensus 218 LaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a 297 (549)
T cd07127 218 LATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANA 297 (549)
T ss_pred HhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999998764 4668999999999999999985 467899999999999999999999999999988
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh---------hHHHHHHHHHHHh
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG---------IYEKFADAFSKAV 360 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~ 360 (533)
+. ++ +++|+|||||+||++|||++.+++.+++++|.|+||.|++++|+|||++ +||+|+++|++++
T Consensus 298 ~~--~~---v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~ 372 (549)
T cd07127 298 RQ--AQ---VYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI 372 (549)
T ss_pred cc--Cc---EEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence 73 67 9999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred hcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCccccccccc
Q 009516 361 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFG 436 (533)
Q Consensus 361 ~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FG 436 (533)
+++ +|||.+..+++||++++.+++++.+ +++.|+ +++||.... .+++|++|||+...+++|++++||+||
T Consensus 373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FG 446 (549)
T cd07127 373 DGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFG 446 (549)
T ss_pred HHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcC
Confidence 999 9999999999999999999999864 555665 778876532 233466999999888999999999999
Q ss_pred ceEEEEeeCCHHHHHHHHHcCC--C-CcEEEEEcCCHHHHHHHHhhc-cee-EEEECCCCCCCCCC--CccCcCCCCCCC
Q 009516 437 PVAPLLCFKTEEEAIHMANDTN--A-GLAAYIFTNNLQRTWRVSEAL-EYG-LVGVNEGLISTEVA--PFGGVKQSGLGR 509 (533)
Q Consensus 437 Pv~~v~~~~~~~eai~~~n~~~--~-gL~a~v~s~d~~~~~~~a~~l-~~G-~V~iN~~~~~~~~~--PfGG~~~SG~G~ 509 (533)
||++|++|+|.||+|+++|++. + ||+++|||+|.+.++++.+++ ++| +++||.....-..+ ||||.+.||...
T Consensus 447 PVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~ 526 (549)
T cd07127 447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP 526 (549)
T ss_pred ceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc
Confidence 9999999999999999999984 4 599999999999999999984 455 99999433222244 599999999998
Q ss_pred C-ChHHHHHhhheeeEEE
Q 009516 510 E-GSKYGMDEFLEIKYVC 526 (533)
Q Consensus 510 ~-gg~~~l~~~~~~k~v~ 526 (533)
. ++.+..-.|...+.-.
T Consensus 527 ~a~~~~~~~~fv~~r~~~ 544 (549)
T cd07127 527 AANAALTDGAFVANRFRV 544 (549)
T ss_pred ccccccchhhhhhcceEE
Confidence 8 5567777777666443
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-82 Score=617.51 Aligned_cols=458 Identities=31% Similarity=0.505 Sum_probs=425.4
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009516 68 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (533)
Q Consensus 68 ~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (533)
+.++++.+.|+||+.++.++..++.|+++-+..|++|++.|.+.+...|.+.|+.+.+.+-+|+|.+++..++|+||+..
T Consensus 62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv 141 (583)
T KOG2454|consen 62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV 141 (583)
T ss_pred CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HH-hHHHHHHHHHHHHHHHHHHHHhCcc-cCCCC--CCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEE
Q 009516 148 EA-VGEVDYGAKFIEFYAEEAKRVYGEI-IPATL--PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV 223 (533)
Q Consensus 148 ~a-~~Ev~~~~~~l~~~a~~~~~~~~~~-~~~~~--~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVl 223 (533)
+| .+|+..+.+.+.|...+.++..... .|... --...++.++|+||++.|.|||||+.+++..+..||.+||++|+
T Consensus 142 DAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVv 221 (583)
T KOG2454|consen 142 DASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVV 221 (583)
T ss_pred hhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEE
Confidence 87 5899999999999988776654321 11110 01335689999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHHHHH----HHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcccccee
Q 009516 224 KPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRV 299 (533)
Q Consensus 224 Kps~~tp~~~~~l~~l----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~ 299 (533)
|.|+++.++.....++ |+..|-|+++++++++- ++.++.|.+|+.++++.|.||..+++.|++.++++++| +
T Consensus 222 K~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTP---v 297 (583)
T KOG2454|consen 222 KVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTP---V 297 (583)
T ss_pred EeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCc---E
Confidence 9999999987655544 55669999999999994 58899999999999999999999999999999999999 9
Q ss_pred eecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCccc
Q 009516 300 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI 379 (533)
Q Consensus 300 ~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli 379 (533)
++|||||+++||++|||+++.+.-++++.|..+||.|...+|++||+++||.|+..|..+++.++.|.|+...++||.|+
T Consensus 298 ~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~ 377 (583)
T KOG2454|consen 298 TLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMC 377 (583)
T ss_pred EEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHH
Q 009516 380 NKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 455 (533)
Q Consensus 380 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n 455 (533)
+.++++.++.++++|+++||+++.||.+.. .-|.|++||++.+++++|.+++||.||||++|+++++.|++|+++|
T Consensus 378 s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN 457 (583)
T KOG2454|consen 378 SQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLAN 457 (583)
T ss_pred hccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhcc
Confidence 999999999999999999999999998753 4589999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 456 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 456 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+++|||.++||+.|..+.++++++|++|+|.||+... ..-++||||+|.||+||.+|.+||+..+..|+|+...
T Consensus 458 ~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~ 532 (583)
T KOG2454|consen 458 DSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDR 532 (583)
T ss_pred CCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceeccc
Confidence 9999999999999999999999999999999999654 4457999999999999999999999999999997654
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-83 Score=631.02 Aligned_cols=450 Identities=36% Similarity=0.607 Sum_probs=421.5
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHH--hccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.+.||+|+++.++++++++.+||.|+.+|++++.++..|+++|+++|+.||+. |++++..+|.+.|.++++++++|++
T Consensus 422 h~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~e 501 (881)
T KOG2452|consen 422 HQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQE 501 (881)
T ss_pred HhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccc
Confidence 45699999999999999999999999999999999999999999999999984 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCC--C-CceeEEEeeeceEEEEEcCCCcchHHHH
Q 009516 133 ELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATL--P-DRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~--~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 208 (533)
+|+.+.+++.|.-+.-|.. -+...++.+|||++|.+++.|..+|... | .+.+.++++|+|||++|+|||||+.++.
T Consensus 502 elat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmls 581 (881)
T KOG2452|consen 502 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLS 581 (881)
T ss_pred hhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHH
Confidence 9999999999988777753 5777899999999999999998887643 2 2457789999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
|+.+.+|++- ..++..- .|++|+++|++.-+|..|..||+|++|-||||+++|+.|++.
T Consensus 582 wk~aaclaa~-----------------~~k~~e~----sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~s 640 (881)
T KOG2452|consen 582 WKTAACLAAQ-----------------VLKFAEL----TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 640 (881)
T ss_pred HHHHHHHHHH-----------------Hhhhhhh----cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHH
Confidence 9999999641 1222222 378999999999999999999999999999999999999999
Q ss_pred hhc-CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCC
Q 009516 289 AAG-TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367 (533)
Q Consensus 289 ~~~-~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 367 (533)
++. +.|+ +++||||++|+|++.|+|+++|+.....+.|++-|..|++..|+||..+|+|+|+.++.++++++++|+
T Consensus 641 ca~snikk---vslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~ 717 (881)
T KOG2452|consen 641 CAISNVKK---VSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGN 717 (881)
T ss_pred Hhhcchhe---eeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCC
Confidence 884 6888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeC--
Q 009516 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK-- 445 (533)
Q Consensus 368 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~-- 445 (533)
|+|.+++.||.-...+..++.+|++.+++.||++.+||++.+..|.|++|||++++++.|.+..||.||||+.|.+|+
T Consensus 718 pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~ 797 (881)
T KOG2452|consen 718 PLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADG 797 (881)
T ss_pred cccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCC
Confidence 999999999999999999999999999999999999999987778999999999999999999999999999999998
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 446 ~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
|.|++++.+|+++|||+++|||+|..++.+++++|++|+|+||++.-.+...||||+|+||+|...|.++|.+|..+|+|
T Consensus 798 d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~kti 877 (881)
T KOG2452|consen 798 DLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTV 877 (881)
T ss_pred CHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEE
Confidence 56999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred EEe
Q 009516 526 CLG 528 (533)
Q Consensus 526 ~~~ 528 (533)
++.
T Consensus 878 t~e 880 (881)
T KOG2452|consen 878 TFE 880 (881)
T ss_pred Eee
Confidence 864
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-81 Score=657.79 Aligned_cols=398 Identities=22% Similarity=0.253 Sum_probs=351.4
Q ss_pred HHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHh
Q 009516 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 171 (533)
Q Consensus 92 ~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~ 171 (533)
+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++. ++.++|+++...
T Consensus 4 ~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~~--- 74 (429)
T cd07121 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKTP--- 74 (429)
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhcC---
Confidence 68999999999999999999999999999999999999999999999999999997763 445666655321
Q ss_pred Ccc-c-CC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHH----HHc
Q 009516 172 GEI-I-PA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQA 243 (533)
Q Consensus 172 ~~~-~-~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll----~~a 243 (533)
+.. . +. ..++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++ .++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~a 154 (429)
T cd07121 75 GTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEA 154 (429)
T ss_pred cccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHc
Confidence 111 1 11 112234578899999999999999999999999999999999999999999999999999887 478
Q ss_pred CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHH
Q 009516 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNG 323 (533)
Q Consensus 244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~ 323 (533)
|+|+|++|++++++.+.++.|+.||+|++|+||||+.+|+.|++. .|| +++|+|||||+||++|||+|+|++.
T Consensus 155 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~---~~lelGGk~p~iV~~dADld~Aa~~ 227 (429)
T cd07121 155 GGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKK---AIGAGAGNPPVVVDETADIEKAARD 227 (429)
T ss_pred CCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCc---eEeecCCCceEEEecCCCHHHHHHH
Confidence 999999999998767789999999999999999999999999875 477 9999999999999999999999999
Q ss_pred HHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHC--CCeE
Q 009516 324 ALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK--GAKV 401 (533)
Q Consensus 324 i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~--Ga~v 401 (533)
+++++|.|+||.|+|.+|+|||+++||+|+++|+++ . .++++..+.+++.++++++.+. |+++
T Consensus 228 i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~ 292 (429)
T cd07121 228 IVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKK 292 (429)
T ss_pred HHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCcccccc
Confidence 999999999999999999999999999999999886 1 2478999999999999998864 7999
Q ss_pred EeCCccc---CCCCceee---cEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCc--EEEEEcCCHHHH
Q 009516 402 LLGGRRH---SLGMTFYE---PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRT 473 (533)
Q Consensus 402 ~~gg~~~---~~~~~~~~---Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL--~a~v~s~d~~~~ 473 (533)
+.||... ...|.|++ |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+++
T Consensus 293 ~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a 372 (429)
T cd07121 293 WVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENL 372 (429)
T ss_pred ccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHH
Confidence 9998641 11367776 599999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHhhcceeEEEECCCCCCCCCCCccCcCCCCC--CCCChHHHHHhhheeeEEE
Q 009516 474 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL--GREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 474 ~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~--G~~gg~~~l~~~~~~k~v~ 526 (533)
+++++++++|+||||++.. +.+||||+|.|++ |.+-| +|+ +..|+++
T Consensus 373 ~~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~ 421 (429)
T cd07121 373 TKMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFT 421 (429)
T ss_pred HHHHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcC-cCc---cChhhhh
Confidence 9999999999999998755 5789999999998 54433 444 5556554
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-80 Score=652.62 Aligned_cols=408 Identities=18% Similarity=0.214 Sum_probs=352.7
Q ss_pred HHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHH--HHHHHHHHHHHHh
Q 009516 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAK--FIEFYAEEAKRVY 171 (533)
Q Consensus 94 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~--~l~~~a~~~~~~~ 171 (533)
+++|+++|++||+.|+.+|+.+|.++|+++++.|++++++|++++++|+|||+.+++.++..++. ..++++.. ..
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~---~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDE---KT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcc---cc
Confidence 46899999999999999999999999999999999999999999999999999999877665543 23443322 12
Q ss_pred CcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH----HcCCCC
Q 009516 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPP 247 (533)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~----~aGlP~ 247 (533)
+...+.. .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++. ++|+|+
T Consensus 78 ~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLTGD-ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred CceecCC-CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 2222321 13456889999999999999999999999999999999999999999999999988888875 779999
Q ss_pred CceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHH
Q 009516 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAA 327 (533)
Q Consensus 248 gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~ 327 (533)
|++|+|++.+.+.++.|+.||+|++|+||||+. +++.+++++|| +++|+|||+|+||++|||+|.|++.++++
T Consensus 157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~---~~lElGGk~p~IV~~dADl~~Aa~~iv~~ 229 (439)
T cd07081 157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKP---AIGVGAGNTPVVIDETADIKRAVQSIVKS 229 (439)
T ss_pred hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCC---EEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 999999987778899999999999999999998 56667778888 99999999999999999999999999999
Q ss_pred HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcc
Q 009516 328 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 407 (533)
Q Consensus 328 ~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 407 (533)
+|.|+||.|++.+|+|||+++||+|+++|.+++ ||+++.++.+++.++++++..+|++++.|+..
T Consensus 230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~ 294 (439)
T cd07081 230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAY 294 (439)
T ss_pred HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHH
Confidence 999999999999999999999999999999873 89999999999999999999999987544321
Q ss_pred c-C-CCCceeecE---EeccCC--CCCcccccccccceEEEEeeCCHHHHHHHHHcC----CCCcEEEEEcCC---HHHH
Q 009516 408 H-S-LGMTFYEPT---VLSNVK--SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNN---LQRT 473 (533)
Q Consensus 408 ~-~-~~~~~~~Pt---vl~~~~--~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~----~~gL~a~v~s~d---~~~~ 473 (533)
. . ..|+|++|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+++
T Consensus 295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a 374 (439)
T cd07081 295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENM 374 (439)
T ss_pred HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHH
Confidence 1 1 247899998 998888 999999999999999999999999999999965 799999999999 9999
Q ss_pred HHHHhhcceeEEEECCCC-CCCC--CCCccCcCCC--CCCCCChHH-----HHHhhheeeEEEE
Q 009516 474 WRVSEALEYGLVGVNEGL-ISTE--VAPFGGVKQS--GLGREGSKY-----GMDEFLEIKYVCL 527 (533)
Q Consensus 474 ~~~a~~l~~G~V~iN~~~-~~~~--~~PfGG~~~S--G~G~~gg~~-----~l~~~~~~k~v~~ 527 (533)
+++++++++|+||||.+. .+.. ..-|||++.+ |.|..||.. +..+|+++|.|..
T Consensus 375 ~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 375 NQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 999999999999999876 3322 4557788765 555544433 3567777777654
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-79 Score=647.65 Aligned_cols=409 Identities=22% Similarity=0.222 Sum_probs=356.8
Q ss_pred CCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHH
Q 009516 88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA 167 (533)
Q Consensus 88 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~ 167 (533)
....+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++. ..++++++..
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~ 105 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKT 105 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHh
Confidence 3578899999999999999999999999999999999999999999999999999999988753 3345555543
Q ss_pred HHHhCcc-cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH----H
Q 009516 168 KRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----Q 242 (533)
Q Consensus 168 ~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~----~ 242 (533)
....... ......+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++. +
T Consensus 106 ~~~~~~~~~~~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~e 185 (465)
T PRK15398 106 PGVEDLTTEALTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVA 185 (465)
T ss_pred ccccccccCcccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 2111100 0011123456788999999999999999999999999999999999999999999999999998876 6
Q ss_pred cCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHH
Q 009516 243 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVN 322 (533)
Q Consensus 243 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~ 322 (533)
+|+|+|++|++++.+.+.++.|++||+|++|+||||+.+|+.|++ ..|| +++|+|||||+||++|||+|.|++
T Consensus 186 aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~---~~~elGGk~p~IV~~dADld~Aa~ 258 (465)
T PRK15398 186 AGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKK---AIGAGAGNPPVVVDETADIEKAAR 258 (465)
T ss_pred cCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCc---eeeecCCCceEEEecCCCHHHHHH
Confidence 899999999999866778899999999999999999999999998 3577 999999999999999999999999
Q ss_pred HHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEE
Q 009516 323 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 402 (533)
Q Consensus 323 ~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~ 402 (533)
.+++++|.|+||.|+|++|||||+++||+|+++|+++ + +|++++.+++++.++++++.+++++++
T Consensus 259 ~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~------~---------~~li~~~~~~~v~~~l~~~~~~~~~~~ 323 (465)
T PRK15398 259 DIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN------G---------AVLLTAEQAEKLQKVVLKNGGTVNKKW 323 (465)
T ss_pred HHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc------C---------CccCCHHHHHHHHHHHhhcccccchhh
Confidence 9999999999999999999999999999999999986 1 378999999999999996544566777
Q ss_pred eCCccc---CCCCcee---ecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCc--EEEEEcCCHHHHH
Q 009516 403 LGGRRH---SLGMTFY---EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRTW 474 (533)
Q Consensus 403 ~gg~~~---~~~~~~~---~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL--~a~v~s~d~~~~~ 474 (533)
.||... ...|+|+ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++++
T Consensus 324 ~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~ 403 (465)
T PRK15398 324 VGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLN 403 (465)
T ss_pred hCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHH
Confidence 776431 1124555 4899999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 475 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 475 ~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++++++++|+||||++.. +.+||||+|.|.+-- +|+.| +..|..|+++.+
T Consensus 404 ~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~~-~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 404 KMARAIQTSIFVKNGPSY--AGLGLGGEGFTTFTI-ATPTG-EGVTSARTFTRR 453 (465)
T ss_pred HHHHhCCceEEEECCCCc--cccCcCCCCCceeee-cccCC-CCccchhhhhhh
Confidence 999999999999998753 678999999998522 57777 888888887654
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-78 Score=636.48 Aligned_cols=382 Identities=20% Similarity=0.224 Sum_probs=338.7
Q ss_pred HHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------hHHHHHHHHHHHHH
Q 009516 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EA--------VGEVDYGAKFIEFY 163 (533)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~Ev~~~~~~l~~~ 163 (533)
..+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+.. ++ ..|++.+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999777666643 33 25999999999999
Q ss_pred HHHHHHHhCcccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH
Q 009516 164 AEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL 241 (533)
Q Consensus 164 a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~ 241 (533)
+...+ ..+...+.. ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 82 a~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPD-PVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCC-CCcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 97654 234333321 1234568899999999999996 56 6788999999999999999999999999999998886
Q ss_pred ----HcCCCCCceecccCChh-hHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCC
Q 009516 242 ----QAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDAD 316 (533)
Q Consensus 242 ----~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd 316 (533)
++|+|+|++|++++.+. +.++.|..||+|++|+||||+++|+.|++.+ +|| +++|||||||+||++|||
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~p---v~lELGGk~p~IV~~dAD 232 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIP---VIKHGDGNCHVYVDESAD 232 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCC---EEeecCCcceEEEeCCCC
Confidence 89999999999998544 6788899999999999999999999999876 577 999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHH
Q 009516 317 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 396 (533)
Q Consensus 317 ~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 396 (533)
+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++
T Consensus 233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~---------------------------------- 277 (406)
T cd07079 233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE---------------------------------- 277 (406)
T ss_pred HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------
Confidence 99999999999999999 9999999999999999999999998765
Q ss_pred CCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHH
Q 009516 397 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 476 (533)
Q Consensus 397 ~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~ 476 (533)
.|++++.|+... .|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 278 ~ga~~~~g~~~~----~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~ 349 (406)
T cd07079 278 AGVELRGDEETL----AILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERF 349 (406)
T ss_pred CCCEEecCHHHH----Hhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHH
Confidence 256654333221 478888 779999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeEEEECCCCCCCCCCCccCcCCCCC----CCCChHHHHHhhheeeEEEEec
Q 009516 477 SEALEYGLVGVNEGLISTEVAPFGGVKQSGL----GREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 477 a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~----G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++++++|+||||++....+..||||.|+||+ |+++|.+++++||+.|+|++++
T Consensus 350 ~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~~ 406 (406)
T cd07079 350 LREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRGD 406 (406)
T ss_pred HHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeCC
Confidence 9999999999999877666789999999998 9999999999999999998764
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-78 Score=636.25 Aligned_cols=386 Identities=21% Similarity=0.240 Sum_probs=342.2
Q ss_pred HHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHh--------HHHHHHHHH
Q 009516 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EAV--------GEVDYGAKF 159 (533)
Q Consensus 92 ~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~Ev~~~~~~ 159 (533)
+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+.. +++ .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999988877753 443 689999999
Q ss_pred HHHHHHHHHHHhCcccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHH
Q 009516 160 IEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237 (533)
Q Consensus 160 l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~ 237 (533)
++|++.+++. .+...+.. ..+...+.+++|+|||++|+||| | ..+++++++||++||+||+|||+.+|+++..++
T Consensus 84 ~~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~ 160 (417)
T PRK00197 84 LRQVAALPDP-VGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160 (417)
T ss_pred HHHHhhcCCC-ccccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHH
Confidence 9999987654 24433321 12346789999999999999986 4 678899999999999999999999999999988
Q ss_pred HHH----HHcCCCCCceecccCCh-hhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEc
Q 009516 238 ELA----LQAGIPPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312 (533)
Q Consensus 238 ~ll----~~aGlP~gvv~~v~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~ 312 (533)
+++ .++|+|+|++|+|++.+ .+.+..|..|++|++|+||||+.+|+.+++.+ +|| +++|||||||+||+
T Consensus 161 ~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~---~~lELGGk~p~IV~ 234 (417)
T PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVP---VIEHGDGICHIYVD 234 (417)
T ss_pred HHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCC---EEeecCCcceEEEe
Confidence 885 68999999999999644 45788888899999999999999999999865 577 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 009516 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392 (533)
Q Consensus 313 ~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 392 (533)
+|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|.+++++++++
T Consensus 235 ~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------------------------- 287 (417)
T PRK00197 235 ESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE-------------------------- 287 (417)
T ss_pred CCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe--------------------------
Confidence 999999999999999999999 99999999999999999999999999988542
Q ss_pred HHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHH
Q 009516 393 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472 (533)
Q Consensus 393 ~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 472 (533)
++ ||... .+ |+ |||+ +++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 288 --------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~ 351 (417)
T PRK00197 288 --------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAA 351 (417)
T ss_pred --------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHH
Confidence 11 11110 01 33 9998 4689999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCC----CCChHHHHHhhheeeEEEEec
Q 009516 473 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 473 ~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G----~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++++++++++|+||||++....+..||||.|+||+| |++|++++++||+.|+|++++
T Consensus 352 ~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 412 (417)
T PRK00197 352 AERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD 412 (417)
T ss_pred HHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence 999999999999999998776678899999999999 999999999999999998753
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-77 Score=657.96 Aligned_cols=381 Identities=20% Similarity=0.208 Sum_probs=344.2
Q ss_pred HHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcC--CCHHHH----hHHHHHHHHH
Q 009516 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLI------TLEQG--KPLKEA----VGEVDYGAKF 159 (533)
Q Consensus 92 ~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a----~~Ev~~~~~~ 159 (533)
+++++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++ ++|+| ||+.++ ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 45999999999999999999999999999999999999999999996 77999 888877 4699999999
Q ss_pred HHHHHHHHHHHhCcccCC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHH
Q 009516 160 IEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237 (533)
Q Consensus 160 l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~ 237 (533)
++||+++ .+..+...+. ...+...++.++|+|||++|+||| |+.++ ++++|||++||+||+|||+.||+++..|+
T Consensus 374 ~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 374 IRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 9999988 4444554431 122444688999999999999999 99998 99999999999999999999999999999
Q ss_pred HHHHHcCCCCCc----eecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEcc
Q 009516 238 ELALQAGIPPGV----VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFD 313 (533)
Q Consensus 238 ~ll~~aGlP~gv----v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~ 313 (533)
+++.++ +|+|+ +|+|++ +.++++.|+.||+|++|+||||+.. +++.++.++|| +++|||||||+||++
T Consensus 451 ~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~---v~lELGGk~p~iV~~ 522 (718)
T PLN02418 451 KVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIP---VLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCC---EEEeCCCcceEEEeC
Confidence 999999 99996 999997 5688999999999999999999965 44455567888 999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHH
Q 009516 314 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 393 (533)
Q Consensus 314 dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 393 (533)
|||+|.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.+++++
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~ 568 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA 568 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence 999999999999999999 9999999999999999997 2 35899999
Q ss_pred HHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHH
Q 009516 394 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473 (533)
Q Consensus 394 a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~ 473 (533)
|+++||++ +||...+ | ++. + ++|++++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.+++
T Consensus 569 a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a 637 (718)
T PLN02418 569 LRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVA 637 (718)
T ss_pred HHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHH
Confidence 99999999 6886531 3 233 3 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEECCCCCCCCCCCccCcCCCCC--CCCC--hHHHHHhhheeeEEEEe
Q 009516 474 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL--GREG--SKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 474 ~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~--G~~g--g~~~l~~~~~~k~v~~~ 528 (533)
.++++++++|+||||++....+..||||+|+||+ ||++ |++|+++||+.|+|+++
T Consensus 638 ~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g 696 (718)
T PLN02418 638 EIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRG 696 (718)
T ss_pred HHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEEC
Confidence 9999999999999999876667789999999999 9885 99999999999999886
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-77 Score=584.17 Aligned_cols=424 Identities=31% Similarity=0.493 Sum_probs=386.9
Q ss_pred HHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhC
Q 009516 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYG 172 (533)
Q Consensus 94 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~ 172 (533)
+++.++.++.+|.+-+..+.+.|.++|.++...+++|.++|.+++..|.+||..++. .|+...+..++|+....+....
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 345588999999999999999999999999999999999999999999999999885 5888888888888777655432
Q ss_pred cc-cC--CCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCc
Q 009516 173 EI-IP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV 249 (533)
Q Consensus 173 ~~-~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gv 249 (533)
.. .+ ....-...+++.+|+|||++|+|||||+.+.+..+++||+|||+||+|||+.+|.++..|++++-+. ++.+.
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~ 162 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDL 162 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcce
Confidence 21 11 1112346789999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred eecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHh
Q 009516 250 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKF 329 (533)
Q Consensus 250 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f 329 (533)
+.+|.|.-+|. ..|+.| +.|.|.||||+.+|+.|+.+++++++| ++||||||||++|++|+|++-+++.|+++++
T Consensus 163 ~~VV~Ggv~ET-t~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTP---vtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 163 IRVVNGGVPET-TELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTP---VTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred EEEecCCCchH-HHHHHh-hccEEEecCCchHHHHHHHHHHhcCCc---EEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 99999955565 456666 899999999999999999999999999 9999999999999999999999999999999
Q ss_pred hccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC
Q 009516 330 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 409 (533)
Q Consensus 330 ~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 409 (533)
.|+||.|.++++|+++.+++.+++++++..++++ .|.-..++.+++-+|+..+++|+.+++++- .+++.||..+.
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~ 312 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE 312 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch
Confidence 9999999999999999999999999999999998 587778899999999999999999998742 78999999764
Q ss_pred CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECC
Q 009516 410 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 489 (533)
Q Consensus 410 ~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~ 489 (533)
...|++|||+.+++++.++|+||+||||++|+.+++.||+|+.+|+-+-.|++|+||+|.....|+..++.+|.|.+|+
T Consensus 313 -~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND 391 (477)
T KOG2456|consen 313 -SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVND 391 (477)
T ss_pred -hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecc
Confidence 3479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 490 GLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 490 ~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
..+ ....+||||++.||+|+++|.++++.|+..|++..+.
T Consensus 392 ~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs 433 (477)
T KOG2456|consen 392 VIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRS 433 (477)
T ss_pred eEEEEEeeccCcCCcCccccccccccccccccccchhhhhcc
Confidence 765 4468999999999999999999999999999986653
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-77 Score=625.52 Aligned_cols=373 Identities=21% Similarity=0.262 Sum_probs=336.8
Q ss_pred HHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-HHHHHHH-HHHHHHHHHHHHh
Q 009516 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAK-FIEFYAEEAKRVY 171 (533)
Q Consensus 94 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~-~l~~~a~~~~~~~ 171 (533)
++.|+++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++ .++|++.. +..
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4689999999999999999999999999999999999999999999999999999986 7888887 78888863 333
Q ss_pred CcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH----HcCCCC
Q 009516 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPP 247 (533)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~----~aGlP~ 247 (533)
+...+ ..+...+++++|+|||++|+|||||+...+|++++||++||+||+|||+.+|+++..++++++ ++|+|+
T Consensus 79 g~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GVIEE--DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred eeecc--CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 32211 124567889999999999999999999999999999999999999999999999998888764 789999
Q ss_pred CceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHH
Q 009516 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAA 327 (533)
Q Consensus 248 gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~ 327 (533)
|++|++++.+.+.++.|+.||+|++|+||||+.+++ .+++++|| +++|+|||||+||++|||+|.|++.++++
T Consensus 157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~---~~~elgG~~p~iV~~dADl~~A~~~i~~~ 229 (436)
T cd07122 157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKP---AIGVGPGNVPAYIDETADIKRAVKDIILS 229 (436)
T ss_pred hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCC---EEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 999999987778899999999999999999999754 45667888 99999999999999999999999999999
Q ss_pred HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcC-------ccCCC-CCCCcccCcccCHHHHHHHHHHHHHHHHCCC
Q 009516 328 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL-------KVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGA 399 (533)
Q Consensus 328 ~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~-------~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 399 (533)
+|.|+||.|++++|+|||+++||+|+++|+++...+ ++|++ .+.++++||+++..+.+++.+++..+..+|+
T Consensus 230 ~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga 309 (436)
T cd07122 230 KTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDT 309 (436)
T ss_pred hhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCC
Confidence 999999999999999999999999999999999887 89999 4778899999999999988888777777777
Q ss_pred eEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcC----CCCcEEEEEcCCHHHHHH
Q 009516 400 KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNNLQRTWR 475 (533)
Q Consensus 400 ~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~----~~gL~a~v~s~d~~~~~~ 475 (533)
++++++ +.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||+++|||+|.+++++
T Consensus 310 ~vl~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~ 374 (436)
T cd07122 310 KVLVAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEE 374 (436)
T ss_pred eEEEEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHH
Confidence 777654 45778899987 56799999999999999999999997 899999999999999999
Q ss_pred HHhhcceeEEEECCCCC
Q 009516 476 VSEALEYGLVGVNEGLI 492 (533)
Q Consensus 476 ~a~~l~~G~V~iN~~~~ 492 (533)
+++++++|+||||+++.
T Consensus 375 ~~~~l~aG~V~IN~~~~ 391 (436)
T cd07122 375 FALRMPVSRILVNTPSS 391 (436)
T ss_pred HHhhCCceEEEEeCCcc
Confidence 99999999999998764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=624.71 Aligned_cols=413 Identities=18% Similarity=0.214 Sum_probs=362.9
Q ss_pred CCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHH
Q 009516 88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEE 166 (533)
Q Consensus 88 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~ 166 (533)
..+.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. +...+...+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 3578899999999999999999999999999999999999999999999999999999988764 233455556555543
Q ss_pred HHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHH----HHHHH
Q 009516 167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA----ELALQ 242 (533)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~----~ll~~ 242 (533)
.+. .|. .. ...+...+.+++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..++ +++.+
T Consensus 84 ~~~-~G~-~~-~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 MKT-IGI-LS-EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred Ccc-cce-ec-CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 322 232 11 123556788999999999999999999999999999999999999999999999999854 55589
Q ss_pred cCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHH
Q 009516 243 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVN 322 (533)
Q Consensus 243 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~ 322 (533)
+|+|+|++|++++.+.+.++.|+.||+|++|+||||+.+++. ++.+.|| +++|+|||+|+||++|||+|.|++
T Consensus 161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~~~~p---v~~e~gGn~p~iV~~dADld~Aa~ 233 (488)
T TIGR02518 161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYSSGTP---AIGVGPGNGPAYIERTANVKKAVR 233 (488)
T ss_pred cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHHcCCC---EEEEcCCCCeEEEeCCCCHHHHHH
Confidence 999999999999877789999999999999999999996544 4456788 999999999999999999999999
Q ss_pred HHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH-------hhcCccCCC-CCCCcccCcccCHHHHHHHHHHHHHH
Q 009516 323 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA-------VKNLKVGDG-FGEGVVQGPLINKAALEKVETFVEDA 394 (533)
Q Consensus 323 ~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~-------~~~~~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a 394 (533)
.++.++|+|+||.|++.+|+|||+++||+|+++|+++ .+.+++|+| +++++++||+++..+++++.++++.+
T Consensus 234 ~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~a 313 (488)
T TIGR02518 234 DIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLT 313 (488)
T ss_pred HHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccc
Confidence 9999999999999999999999999999999999998 889999996 67899999999999999999999999
Q ss_pred HHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHc----CCCCcEEEEEcCCH
Q 009516 395 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND----TNAGLAAYIFTNNL 470 (533)
Q Consensus 395 ~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~----~~~gL~a~v~s~d~ 470 (533)
+.+|+++++||.. .+++++++ ++|.||||++|++|+|+||||+++|+ ++|||+++|||+|.
T Consensus 314 v~~gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~ 378 (488)
T TIGR02518 314 VPEDAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENK 378 (488)
T ss_pred cCCCCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCH
Confidence 9999999999843 25677776 79999999999999999999999987 69999999999999
Q ss_pred HHHHHHHhhcceeEEEECCCCC------CCCCCC-----ccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 471 QRTWRVSEALEYGLVGVNEGLI------STEVAP-----FGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 471 ~~~~~~a~~l~~G~V~iN~~~~------~~~~~P-----fGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++++++++++++|+||||++.. .....| ||+++.+++. .+-+++++++.|+|..+
T Consensus 379 ~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~ 444 (488)
T TIGR02518 379 DIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYG 444 (488)
T ss_pred HHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEec
Confidence 9999999999999999997542 111344 7777766666 38899999999998765
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-76 Score=562.89 Aligned_cols=466 Identities=33% Similarity=0.543 Sum_probs=441.5
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
....+|+|-. +|...+.++|+++++|++|..++.+|.+.+++.|++|++.|.+.+...|.+|.+++.|.|+...+.|.
T Consensus 21 ~gvy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg 98 (507)
T KOG2453|consen 21 AGVYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLG 98 (507)
T ss_pred cceeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh
Confidence 3467789976 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHh
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 215 (533)
+++++|+||.+.+..+|+++.++.|+|..++.+.+.|..+|++.++......|.|+|+|++|+.+|||....-|.-+.||
T Consensus 99 ~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaM 178 (507)
T KOG2453|consen 99 KLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAM 178 (507)
T ss_pred hhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCchHHHHH----HHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 216 ACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 216 aaGN~VVlKps~~tp~~~~~----l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
.+||+|++||++.+|+++.. +.+.|.+--+|++.+....| +.+.++++..+.+++.+.||||+++++.+......
T Consensus 179 v~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqa 257 (507)
T KOG2453|consen 179 VCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQA 257 (507)
T ss_pred hhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHHH
Confidence 99999999999999998754 44556667899999998888 68999999999999999999999999999988888
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++.+ ..|||||||++||.+|||+..++...++++...+||+|+..+|++||+++||+.+++|+...+++++|+|+|+
T Consensus 258 rfgk---~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ 334 (507)
T KOG2453|consen 258 RFGK---LLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDS 334 (507)
T ss_pred Hhhh---HHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCC
Confidence 8888 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
.+.+||+.++....+.++-++++++.|+++++||+..+.+|+|++|||++ ..+|.++..+|.|.||++|.+|++++|++
T Consensus 335 ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ 413 (507)
T KOG2453|consen 335 NTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAI 413 (507)
T ss_pred CceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhh
Confidence 99999999999999999999999999999999999887778999999998 89999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhh--cceeEEEECCCCCCCC-CCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLISTE-VAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~--l~~G~V~iN~~~~~~~-~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
.+-|+.+.||++||||+|...+.++..- -++|.|.||-++.++. .-.|||.|..|-||+.|.++.++|++..+.+++
T Consensus 414 ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstctin 493 (507)
T KOG2453|consen 414 AINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTIN 493 (507)
T ss_pred eeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeee
Confidence 9999999999999999999999999874 5699999999887653 678999999999999999999999998877765
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-73 Score=647.75 Aligned_cols=417 Identities=21% Similarity=0.253 Sum_probs=365.3
Q ss_pred EEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-HHHHHHHHHHHH
Q 009516 85 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFY 163 (533)
Q Consensus 85 ~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~ 163 (533)
.+...+.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++. +...++..++++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 3456799999999999999999999999999999999999999999999999999999999998875 444444444444
Q ss_pred HHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH--
Q 009516 164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL-- 241 (533)
Q Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~-- 241 (533)
.. .++..+. .+ ..++...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++++
T Consensus 85 ~~-~~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YK-DEKTVGV-IE-EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hc-CCCcccc-cC-cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 32 1122222 11 1124557889999999999999999999999999999999999999999999999999888865
Q ss_pred --HcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHH
Q 009516 242 --QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNV 319 (533)
Q Consensus 242 --~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~ 319 (533)
++|+|+|++|++++.+.+.+..|++|++|++|+||||+.++ +.+++++|| +++|+|||||+||++|||++.
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~p---v~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKP---ALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCC---eEEECCCCCeEEEeCCCCHHH
Confidence 68999999999998777889999999999999999999964 455677888 999999999999999999999
Q ss_pred HHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCC
Q 009516 320 AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 399 (533)
Q Consensus 320 aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 399 (533)
|++.+++++|.|+||.|++++|||||++++|+|+++|+++ | +|+++.+++++++++++++...|+
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~------g---------~~l~~~~~~~~v~~~i~~a~~~~~ 299 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH------G---------AYFLNKKELKKLEKFIFGKENGAL 299 (862)
T ss_pred HHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh------C---------CeeCCHHHHHHHHHHHhhccCCCc
Confidence 9999999999999999999999999999999999999886 2 689999999999999998876655
Q ss_pred eE-EeCCcccC---CCCceeecEE------eccCCCCCcccccccccceEEEEeeCCHHHHHHHHHc----CCCCcEEEE
Q 009516 400 KV-LLGGRRHS---LGMTFYEPTV------LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND----TNAGLAAYI 465 (533)
Q Consensus 400 ~v-~~gg~~~~---~~~~~~~Ptv------l~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~----~~~gL~a~v 465 (533)
+. ++||.... ..|+|++||+ +.+++++|++++ |.||||++|++|+|+||||+++|+ ++|||+++|
T Consensus 300 ~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i 378 (862)
T PRK13805 300 NADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVI 378 (862)
T ss_pred CccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE
Confidence 43 45664311 2368899997 778999999887 789999999999999999999988 489999999
Q ss_pred EcCCHHHHHHHHhhcceeEEEECCCC----------CCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 466 FTNNLQRTWRVSEALEYGLVGVNEGL----------ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 466 ~s~d~~~~~~~a~~l~~G~V~iN~~~----------~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
||+|.++++++++++++|+||||++. ...+.+|||| |.||.|+.+|+.|+++|++.|+|..+
T Consensus 379 ~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~ 450 (862)
T PRK13805 379 YTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKR 450 (862)
T ss_pred ECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeec
Confidence 99999999999999999999999876 3567899998 99999999999999999999998754
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-73 Score=563.55 Aligned_cols=472 Identities=25% Similarity=0.369 Sum_probs=429.5
Q ss_pred CCccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHH-
Q 009516 51 GLLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM- 128 (533)
Q Consensus 51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~- 128 (533)
.+.+.+..|+|+.+.. .......+|.+ ...++.+..++.+++++||++|.+|++.|..+|..+|.+|+++.|+++.
T Consensus 56 ~~~evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlist 133 (561)
T KOG2455|consen 56 RPLEVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLIST 133 (561)
T ss_pred CceeccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcc
Confidence 3567889999999885 45577889998 5689999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHhHH-HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeec-eEEEEEcCCCcchHH
Q 009516 129 AHKEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAM 206 (533)
Q Consensus 129 ~~~~~la~~~~~e~Gk~~~~a~~E-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~ 206 (533)
+++-+|....++-.||...+|..+ +.+.++++|+.+..+..++........++..+...++|+ |.|.+|+||||-...
T Consensus 134 kyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~ 213 (561)
T KOG2455|consen 134 KYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIG 213 (561)
T ss_pred hHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeec
Confidence 788889999999999999999766 678899999999888877765544445677777788887 999999999998876
Q ss_pred HHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHH
Q 009516 207 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286 (533)
Q Consensus 207 ~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 286 (533)
.-...+||| +||+|++|||..+.++.+.+.++|+|||+|+|++|+||++++..++.+..+|...++.||||+.+-+.+.
T Consensus 214 gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lw 292 (561)
T KOG2455|consen 214 GNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLW 292 (561)
T ss_pred cccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHH
Confidence 666777887 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCccc---cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcC
Q 009516 287 AGAAGTVKK---VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 363 (533)
Q Consensus 287 ~~~~~~~k~---~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 363 (533)
+..+.++.+ ..+++.|+||||..+|.++||++.++...++++|.++||.|++.+|+||++++++.+.++|.+.-+++
T Consensus 293 k~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~ 372 (561)
T KOG2455|consen 293 KKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQL 372 (561)
T ss_pred HHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhc
Confidence 888775432 24599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCcccCcccCHHHHHHHHHHHHHHHH-CCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEE
Q 009516 364 KVGDG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 441 (533)
Q Consensus 364 ~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v 441 (533)
++||| .|.++.+||+|+...++|++++|+.|+. ...++++||+-++..|+|++|||+...+|+++++.||+||||++|
T Consensus 373 ~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsV 452 (561)
T KOG2455|consen 373 KIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSV 452 (561)
T ss_pred ccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEE
Confidence 99998 8889999999999999999999999876 457999999998777899999999999999999999999999999
Q ss_pred EeeCC--HHHHHHHH-HcCCCCcEEEEEcCCHHHHHHHHhhcc--eeEEEECCCCCCC--CCCCccCcCCCCCCCC-ChH
Q 009516 442 LCFKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIST--EVAPFGGVKQSGLGRE-GSK 513 (533)
Q Consensus 442 ~~~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~V~iN~~~~~~--~~~PfGG~~~SG~G~~-gg~ 513 (533)
+.|+| ++|++.++ |.++||||++||++|.+.+.+..++|+ +|+.|||+-..++ ..+||||.+.||+... ||+
T Consensus 453 yvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp 532 (561)
T KOG2455|consen 453 YVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGP 532 (561)
T ss_pred EEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCc
Confidence 99985 58999998 678999999999999999999999887 8999999977654 3799999999999977 999
Q ss_pred HHHHhhheeeEE
Q 009516 514 YGMDEFLEIKYV 525 (533)
Q Consensus 514 ~~l~~~~~~k~v 525 (533)
+.+-.|+...+|
T Consensus 533 ~~l~RwtSp~~i 544 (561)
T KOG2455|consen 533 HYLLRWTSPLSI 544 (561)
T ss_pred eEEEeecCcchh
Confidence 999999988766
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-72 Score=589.04 Aligned_cols=372 Identities=17% Similarity=0.174 Sum_probs=338.2
Q ss_pred HHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-----------HHHHHHHHHHHHHHHHHH
Q 009516 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-----------GEVDYGAKFIEFYAEEAK 168 (533)
Q Consensus 100 ~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-----------~Ev~~~~~~l~~~a~~~~ 168 (533)
+|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++....
T Consensus 2 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~ 81 (397)
T cd07077 2 SAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASVG 81 (397)
T ss_pred hHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhcC
Confidence 688999999999999999999999999999999999999999999976543 489999999999997765
Q ss_pred HHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHc---CC
Q 009516 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA---GI 245 (533)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~a---Gl 245 (533)
+..+...+. ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|+++..+++++.++ |+
T Consensus 82 ~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~ 157 (397)
T cd07077 82 HIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHG 157 (397)
T ss_pred cccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCC
Confidence 554433322 2357899999999999999999999 9999999999999999999999999999999999887 99
Q ss_pred CCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHH
Q 009516 246 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGAL 325 (533)
Q Consensus 246 P~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~ 325 (533)
|+++++++++.+.+.+..|+.|+++|+|+||||+++++.+++.+. .+| +++|+||++|+||++|||++.|++.++
T Consensus 158 p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~---~~~~~gg~~~~iv~~dad~~~a~~~~~ 232 (397)
T cd07077 158 PKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIP---VIGFGAGNSPVVVDETADEERASGSVH 232 (397)
T ss_pred CCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCc---eEEecCCcceEEEcCCCCHHHHHHHHH
Confidence 999999999867788999999999999999999999999988773 577 999999999999999999999999999
Q ss_pred HHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCC
Q 009516 326 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405 (533)
Q Consensus 326 ~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg 405 (533)
+++|.| ||.|++++|||||+++||+|+++|+++++. +|++++.||
T Consensus 233 ~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~ 277 (397)
T cd07077 233 DSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQET 277 (397)
T ss_pred HhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCc
Confidence 999999 999999999999999999999999998764 577777776
Q ss_pred cccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHH----HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc
Q 009516 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE----EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 481 (533)
Q Consensus 406 ~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~----eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~ 481 (533)
. +.|+.|| ++|.+++||+||||++|++|+|+| ++++++|+++|||+++|||+|.+++.+++++++
T Consensus 278 ~-----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~ 346 (397)
T cd07077 278 K-----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYID 346 (397)
T ss_pred e-----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCC
Confidence 3 3677887 788999999999999999999996 666788999999999999999999999999999
Q ss_pred eeEEEECCCCCCC--CCCCccCcC--CCCCCCCCh-HHHHHhhheeeEEE
Q 009516 482 YGLVGVNEGLIST--EVAPFGGVK--QSGLGREGS-KYGMDEFLEIKYVC 526 (533)
Q Consensus 482 ~G~V~iN~~~~~~--~~~PfGG~~--~SG~G~~gg-~~~l~~~~~~k~v~ 526 (533)
+|+|+||++.... ...||||+| .||+|+++| .+++++|++.|+|.
T Consensus 347 ~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 347 TASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 9999999987644 678999999 899999999 99999999999975
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-70 Score=571.90 Aligned_cols=364 Identities=52% Similarity=0.829 Sum_probs=345.8
Q ss_pred HHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCC
Q 009516 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL 179 (533)
Q Consensus 100 ~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~ 179 (533)
+|++|++.|+.++.++|.++|+++++.|.++.++|++++++|+|||+.+++.|+..+++.++|++...++..+...+...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 57889999999999999999999999999999999999999999999999999999999999999998877654333334
Q ss_pred CCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhh
Q 009516 180 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPD 259 (533)
Q Consensus 180 ~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~ 259 (533)
.+...+.+++|+|||++|.|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~ 161 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDE 161 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchh
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999997777
Q ss_pred HHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccC
Q 009516 260 IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA 339 (533)
Q Consensus 260 ~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~ 339 (533)
.++.|+.|++++.|.||||+++++.|.+.++++++| +++|+||+|++||++|+|++.|++.++.++|.++||.|+++
T Consensus 162 ~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~---~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~ 238 (367)
T cd06534 162 VGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKP---VTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAA 238 (367)
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCe---EEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 889999999999999999999999999999988888 99999999999999999999999999999999999999999
Q ss_pred CeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEE
Q 009516 340 NRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTV 419 (533)
Q Consensus 340 ~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptv 419 (533)
++||||++++|+|+++|+ ||
T Consensus 239 ~~v~v~~~~~~~f~~~l~------------------------------------------------------------tl 258 (367)
T cd06534 239 SRLLVHESIYDEFVEKLV------------------------------------------------------------TV 258 (367)
T ss_pred cEEEEcHHHHHHHHHhhc------------------------------------------------------------ee
Confidence 999999999999999998 66
Q ss_pred eccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCC
Q 009516 420 LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAP 498 (533)
Q Consensus 420 l~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~P 498 (533)
+.++++++++++||+|||+++|++|++.+|+|+++|++++||+++|||+|...+.++++++++|+|+||+.+.. .+.+|
T Consensus 259 ~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~p 338 (367)
T cd06534 259 LVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAP 338 (367)
T ss_pred eeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCC
Confidence 77788899999999999999999999999999999999999999999999999999999999999999998876 78899
Q ss_pred ccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 499 FGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 499 fGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
|||.|+||+|+++|++++++||+.|+|.
T Consensus 339 fgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 339 FGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCcccCccCCCChHHHHHHhceEEEEe
Confidence 9999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-71 Score=610.81 Aligned_cols=378 Identities=17% Similarity=0.178 Sum_probs=331.1
Q ss_pred HHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH----------------HHHHH
Q 009516 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG----------------EVDYG 156 (533)
Q Consensus 93 dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----------------Ev~~~ 156 (533)
+++..+++|++||+.|+.++.++|.++|+++++.|++++++|+ .++||++.+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4888899999999999999999999999999999999999996 588999987765 47888
Q ss_pred HHHHHHHHHHHHHHhCcccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHH
Q 009516 157 AKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234 (533)
Q Consensus 157 ~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~ 234 (533)
++.++|+++ ..+..+...+.. ..+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.||+++.
T Consensus 363 ~~~l~~~a~-~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAA-MEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhc-CCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 889999987 333334433211 11344678999999999999999 9999 689999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC----ceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEE
Q 009516 235 AAAELALQAGIPPG----VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI 310 (533)
Q Consensus 235 ~l~~ll~~aGlP~g----vv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~i 310 (533)
.+++++.++ +|+| +++++++ +.+.++.|..|++|++|+||||+.+|+.|++.++ || +++|+|||||+|
T Consensus 440 ~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~p---v~lElgGk~p~i 511 (715)
T TIGR01092 440 ILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IP---VLGHADGICHVY 511 (715)
T ss_pred HHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CC---EEEEcCCcceEE
Confidence 999999999 9987 6899985 5678889999999999999999999999998864 77 999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHH
Q 009516 311 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 390 (533)
Q Consensus 311 V~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 390 (533)
|++|||++.|++.++.++|.+ ||.|+|++|||||++++|+ | .+.++
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~ 557 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDL 557 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHH
Confidence 999999999987777777655 9999999999999999985 1 26678
Q ss_pred HHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009516 391 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470 (533)
Q Consensus 391 i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 470 (533)
++++.++|++++ ||... . .|+. ..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 558 v~~~~~~Ga~l~-Gg~~~--~-~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~ 628 (715)
T TIGR01092 558 IDMLRTEGVTIH-GGPRF--A-AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDE 628 (715)
T ss_pred HHHHHHCCCEEE-CCcch--h-heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCH
Confidence 888888999985 77543 1 3442 1356899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCC----ChHHHHHhhheeeEEEEe
Q 009516 471 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 471 ~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~----gg~~~l~~~~~~k~v~~~ 528 (533)
+++.++++++++|+||||++....+..||||+|+||+|++ +|++++++||+.|+|+++
T Consensus 629 ~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g 690 (715)
T TIGR01092 629 NVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRG 690 (715)
T ss_pred HHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEEC
Confidence 9999999999999999998866667789999999999963 899999999999999876
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-71 Score=573.39 Aligned_cols=375 Identities=19% Similarity=0.159 Sum_probs=323.1
Q ss_pred HHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCH------HHHhHHHHHHHHHHHHHHHHHH
Q 009516 101 AFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPL------KEAVGEVDYGAKFIEFYAEEAK 168 (533)
Q Consensus 101 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~Ev~~~~~~l~~~a~~~~ 168 (533)
|++||+.|+.++..+|.++|+++++.|++++++|+++ +++|+|||. .++..|+..+++.++||++.++
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999999999 999999994 3466899999999999998886
Q ss_pred HHhCcccCC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHH----HHH
Q 009516 169 RVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQ 242 (533)
Q Consensus 169 ~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~l----l~~ 242 (533)
.. +...+. ..++...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|+++..++++ +.+
T Consensus 81 ~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 PV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred CC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 53 544433 124567889999999999999997 6 67889999999999999999999999999999999 569
Q ss_pred cCCCCCceecccCCh-hhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHH
Q 009516 243 AGIPPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAV 321 (533)
Q Consensus 243 aGlP~gvv~~v~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa 321 (533)
+|+|+|++|+|++.+ .++++.|..||+|++|+||||+.+++.+++. ..|| +++|+|||||+||++|||+|.|+
T Consensus 158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~---~~~e~gGk~p~iV~~dADl~~Aa 231 (398)
T TIGR00407 158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIP---VLGHGDGICHIYLDESADLIKAI 231 (398)
T ss_pred cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCC---EEEecCCcceEEEeCCCCHHHHH
Confidence 999999999999744 4578899999999999999999999998874 3466 99999999999999999999999
Q ss_pred HHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeE
Q 009516 322 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 401 (533)
Q Consensus 322 ~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v 401 (533)
+.+++++|.+ ||.|++.+|+|||+++||+|+++|.++++++++ .+++ .+.+++++.. |
T Consensus 232 ~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----g--- 289 (398)
T TIGR00407 232 KVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL----G--- 289 (398)
T ss_pred HHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc----c---
Confidence 9999999965 999999999999999999999999999988643 1222 1344444321 1
Q ss_pred EeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc
Q 009516 402 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 481 (533)
Q Consensus 402 ~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~ 481 (533)
| ||++ +.+|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++++++
T Consensus 290 ---~-----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~ 352 (398)
T TIGR00407 290 ---P-----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVD 352 (398)
T ss_pred ---C-----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCC
Confidence 1 3544 2347899999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEECCCCCCCCCCCccCcCCCC----CCCCChHHHHHhhheee
Q 009516 482 YGLVGVNEGLISTEVAPFGGVKQSG----LGREGSKYGMDEFLEIK 523 (533)
Q Consensus 482 ~G~V~iN~~~~~~~~~PfGG~~~SG----~G~~gg~~~l~~~~~~k 523 (533)
+|+||||++....+..|||=-.+-| ..-..|+.+++.||+.|
T Consensus 353 ~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 353 SAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred eeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999999988877778998333323 33348999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=300.66 Aligned_cols=362 Identities=16% Similarity=0.122 Sum_probs=265.5
Q ss_pred CHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHH--HH
Q 009516 90 GGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM----AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIE--FY 163 (533)
Q Consensus 90 ~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~----~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~--~~ 163 (533)
+.++++..++..+...+....++.++..+++.++++.+. ..+.+..+.+...+|.+....+..+......|+ ..
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l 82 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENL 82 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHH
Confidence 445666666666666666778888888888888888875 345666677777888887666666555555553 22
Q ss_pred HHHHHHHhCc--ccCCCCC-CceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHH
Q 009516 164 AEEAKRVYGE--IIPATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA 240 (533)
Q Consensus 164 a~~~~~~~~~--~~~~~~~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll 240 (533)
........+. .+....+ +...+++++|+||+++|+|||||+ ..++.+++||++||++|+|||+.+|.++..|.++|
T Consensus 83 ~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l 161 (422)
T cd07080 83 ERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSL 161 (422)
T ss_pred HHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHH
Confidence 2221221221 1111122 456688999999999999999999 79999999999999999999999999999999999
Q ss_pred HHcCCCC----Cceecc--cCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCc-EEEcc
Q 009516 241 LQAGIPP----GVVNVV--MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAP-CIVFD 313 (533)
Q Consensus 241 ~~aGlP~----gvv~~v--~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~-~iV~~ 313 (533)
.++ +|+ +.++++ +|.+.++++.|+.++ |.|+||||+++++.|++.++.+ + .++|+|||++ +|+.+
T Consensus 162 ~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~---~~Le~Ggk~s~~vi~~ 233 (422)
T cd07080 162 ADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--C---RLIDFGPKYSFAVIDR 233 (422)
T ss_pred Hhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--C---eeeecCCceeEEEecH
Confidence 999 787 888888 465566889999887 8899999999999999988754 4 7899999955 55555
Q ss_pred CC----CHHHHHHHHHHHHhhccCCccccCCeEEEehhh---HHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHH
Q 009516 314 DA----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI---YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 386 (533)
Q Consensus 314 dA----d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i---~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~ 386 (533)
++ |++.+++.+++++|.++||.|+|++++|||+++ +++|.++|.++++++.-..|.. ++ +.....+
T Consensus 234 ~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~ 306 (422)
T cd07080 234 EALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAK 306 (422)
T ss_pred HhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHH
Confidence 68 999999999999999999999999999999999 9999999999999876544431 11 3444444
Q ss_pred HHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEE
Q 009516 387 VETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 466 (533)
Q Consensus 387 ~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~ 466 (533)
+...-..+...+.+....+. .++ ||+.... ..+. ....+=.+.|.++++.+|++..++. +-.|++++
T Consensus 307 ~~~~r~~~~~~~~~~~~~~~----~~~----~v~~~~~--~~~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~ 373 (422)
T cd07080 307 IARARLEAEFYELKGGVSRD----LGW----TVIISDE--IGLE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLA 373 (422)
T ss_pred HHHHHHHHHHHHHhcCCCCC----CCe----EEEEeCC--CCcc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEee
Confidence 44443333333322211111 111 2332211 1111 1344457889999999999999986 77899999
Q ss_pred cCCHHHHHHHHhhcc
Q 009516 467 TNNLQRTWRVSEALE 481 (533)
Q Consensus 467 s~d~~~~~~~a~~l~ 481 (533)
..+.+. .++++++.
T Consensus 374 ~~~~~~-~~~~~~l~ 387 (422)
T cd07080 374 PSPAEL-AELADALA 387 (422)
T ss_pred cChhhH-HHHHHHHH
Confidence 988877 77777765
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=266.04 Aligned_cols=386 Identities=19% Similarity=0.225 Sum_probs=299.1
Q ss_pred HHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------cCCCHHHH------hHHHHHHHHH
Q 009516 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLE------QGKPLKEA------VGEVDYGAKF 159 (533)
Q Consensus 92 ~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e------~Gk~~~~a------~~Ev~~~~~~ 159 (533)
.++.+..+.|++|....+.++.++|.+.|..+++.|+++.+++.++...| +|.+-... ...++..++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 35677788999999999999999999999999999999999988866544 44332211 0123344444
Q ss_pred HHHHHHHHHHHhCcccCC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHH
Q 009516 160 IEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237 (533)
Q Consensus 160 l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~ 237 (533)
++.-+.+.+.+ |++... ...|.+.+..|.|+||+++| |..-...++...+-||.+||+||+|.+..+..+...++
T Consensus 83 l~~Va~L~DPv-Gev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~ 159 (417)
T COG0014 83 LRQVAALPDPV-GEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIV 159 (417)
T ss_pred HHHHhcCCCch-HhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHH
Confidence 44444333222 222111 12377888999999999999 66666777888899999999999999999999988887
Q ss_pred HHH----HHcCCCCCceecccCChhh-HHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEc
Q 009516 238 ELA----LQAGIPPGVVNVVMGNAPD-IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312 (533)
Q Consensus 238 ~ll----~~aGlP~gvv~~v~g~~~~-~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~ 312 (533)
+++ .++|+|++.+|+++..+++ +.+.|..+..||.|+-.||..--+.+.+.+. +|++-.+-|++.++|+
T Consensus 160 ~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~------vPVi~~~~G~CHiyvd 233 (417)
T COG0014 160 EVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT------VPVIEHGVGNCHIYVD 233 (417)
T ss_pred HHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc------CCEEecCcceEEEEec
Confidence 665 5679999999999875544 4455555777999999999998887776552 4499888999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH
Q 009516 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392 (533)
Q Consensus 313 ~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 392 (533)
.+||+|.|.+-++.++...-+ .|.+.+.++||+.++++|+.+|.+.+....
T Consensus 234 ~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~g---------------------------- 284 (417)
T COG0014 234 ESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAG---------------------------- 284 (417)
T ss_pred ccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcC----------------------------
Confidence 999999999999999998876 999999999999999999999998876421
Q ss_pred HHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHH
Q 009516 393 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472 (533)
Q Consensus 393 ~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 472 (533)
.++........ +-|.. ..+....-+..|..-+++.|-.+++.|+||+.+|....+++-+|.|+|...
T Consensus 285 ------velr~d~~~~~-----~~~~~--~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~ 351 (417)
T COG0014 285 ------VELRGDAEALA-----LLPDA--VKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYAN 351 (417)
T ss_pred ------eEEEcCHHHHH-----hcccc--CCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHH
Confidence 11111111000 00000 012223345688999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCC----ChHHHHHhhheeeEEEEe
Q 009516 473 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 473 ~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~----gg~~~l~~~~~~k~v~~~ 528 (533)
+++|.+.+++..||||..+.+....-||=-.+-|+... .||-||+++|..|+|..+
T Consensus 352 a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G 411 (417)
T COG0014 352 AERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRG 411 (417)
T ss_pred HHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeC
Confidence 99999999999999999998777666654445565544 799999999999999876
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-24 Score=206.79 Aligned_cols=381 Identities=19% Similarity=0.185 Sum_probs=286.8
Q ss_pred HHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCHHHH-h-----HHHHHHHHHHH
Q 009516 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPLKEA-V-----GEVDYGAKFIE 161 (533)
Q Consensus 94 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~~~a-~-----~Ev~~~~~~l~ 161 (533)
+++..+.|+++++..+.++.++|.++|..++++|..+..++..+ .+.|+|.....- + +.+.....-++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 34566789999999999999999999999999999887766553 344555332211 1 22333333333
Q ss_pred HHHHHHHHHhCcccCC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHH
Q 009516 162 FYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 239 (533)
Q Consensus 162 ~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~l 239 (533)
-.++ .+...|.+..- -..+...+....|+||.++| |..-...+..-...|+++||.+++|....+..+...|.++
T Consensus 82 ~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~ 158 (433)
T KOG4165|consen 82 QIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKL 158 (433)
T ss_pred HHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHH
Confidence 3333 22222332211 12356677788999999999 6666667777778899999999999999999999888887
Q ss_pred HHHc----CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCC
Q 009516 240 ALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDA 315 (533)
Q Consensus 240 l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dA 315 (533)
..++ |.|.+.+++|.. ..++.+.|-.+.-||.|+-.||+...+.|.... | ||+...-.|.+.++|++||
T Consensus 159 v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t----k--IPVLGHA~GichvYvd~da 231 (433)
T KOG4165|consen 159 VQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT----K--IPVLGHAEGICHVYVDKDA 231 (433)
T ss_pred HHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc----c--CcccccccceeEEEecccc
Confidence 7766 779999999987 567878887788899999999999887776543 2 6699999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHH
Q 009516 316 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 394 (533)
Q Consensus 316 d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a 394 (533)
|+++|.+-+..++..+- -.|.+.+.+++|++. ...|.+.|...+.
T Consensus 232 d~~kA~riv~DaK~dYP-AaCNAmETLLIh~dl~~~~~~~~l~~~l~--------------------------------- 277 (433)
T KOG4165|consen 232 DLDKAKRIVRDAKCDYP-AACNAMETLLIHKDLEQSPFFDDLINMLK--------------------------------- 277 (433)
T ss_pred CHHHHHHHHhcccCCCc-hhhhhHHHHhccHhhhhcchHHHHHHHHH---------------------------------
Confidence 99999998888888765 489999999999973 2333333333221
Q ss_pred HHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009516 395 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 474 (533)
Q Consensus 395 ~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~ 474 (533)
.+|.++.+|.+... ++.--++...-++.|.-.-.++|-.+++.++||+.+|..+.++|-.|.|+|...++
T Consensus 278 -~~gVtl~agpkl~~---------~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae 347 (433)
T KOG4165|consen 278 -EEGVTLHAGPKLAA---------LLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAE 347 (433)
T ss_pred -hcCeEEecChhHHh---------hcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHH
Confidence 23333333322210 01111344455678887788999999999999999999999999999999999999
Q ss_pred HHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCC----ChHHHHHhhheeeEEEEe
Q 009516 475 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 475 ~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~----gg~~~l~~~~~~k~v~~~ 528 (533)
+|...+++..|+.|..+.++...-||=--+-|+.+. .||-|++-.+.+||+..+
T Consensus 348 ~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG 405 (433)
T KOG4165|consen 348 HFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG 405 (433)
T ss_pred HHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence 999999999999999998888888876666676554 799999999999998654
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.3e-15 Score=152.71 Aligned_cols=347 Identities=16% Similarity=0.121 Sum_probs=219.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHH--HHHHHHHHHhCc--ccCCCCCCce
Q 009516 110 KLTAAERSKGLRKWYDLLMAH--KEELGQLITLEQGKPLKEAVGEVDYGAKFIE--FYAEEAKRVYGE--IIPATLPDRR 183 (533)
Q Consensus 110 ~~~~~~R~~iL~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~--~~a~~~~~~~~~--~~~~~~~~~~ 183 (533)
.+|.++..++|.++++.+... .....+.+..-+|.+....+. ++.....|+ ......+...+. .+....+...
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~ 80 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGD 80 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence 456666666666666666542 222555566667777665544 444433331 111111111222 1111222333
Q ss_pred eEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCC----Cceecc--cCCh
Q 009516 184 LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP----GVVNVV--MGNA 257 (533)
Q Consensus 184 ~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~----gvv~~v--~g~~ 257 (533)
.+.++.|.|+++.|.|.|-|+.. ++.++.+|++||..|+|+|...+..+..|++.|.+. .|. ..+.++ ++.+
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~-~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVG-FYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchH-HHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 67889999999999999999955 566788999999999999999999999999999887 554 334455 4545
Q ss_pred hhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccc
Q 009516 258 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 337 (533)
Q Consensus 258 ~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~ 337 (533)
.++.+.+.+ ..|+++.+||.++.+.+.+.+.. ..+ .+.-..-.+-.++..+++++.+++.+..-.+...+|.|+
T Consensus 159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~-~~~---~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCs 232 (399)
T PF05893_consen 159 EELEEALSQ--QADAVVAWGGDETIRAIRQPLPP-GAR---LIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACS 232 (399)
T ss_pred hHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCC-CCc---EeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccC
Confidence 677777774 47889999999999999984432 232 444444557777888889999999999999999999999
Q ss_pred cCCeEEEe---hhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHH-----HHHHCCCeEEeCCcccC
Q 009516 338 CANRVLVQ---EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE-----DAVSKGAKVLLGGRRHS 409 (533)
Q Consensus 338 a~~~v~V~---~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~-----~a~~~Ga~v~~gg~~~~ 409 (533)
+++.+||. ..-.++|.++|.+++.+..---|... .+......+....+ .+...+.++..+....
T Consensus 233 Sp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~- 304 (399)
T PF05893_consen 233 SPQVIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNS- 304 (399)
T ss_pred CCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCC-
Confidence 99999998 23457888888777665321111111 12222222222222 2344444454222111
Q ss_pred CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhh-cceeE
Q 009516 410 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA-LEYGL 484 (533)
Q Consensus 410 ~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~-l~~G~ 484 (533)
=||+.... ... ....++=.+.|.++++.+|++..+|....=.|.+++... .+...++.. ...|-
T Consensus 305 -------~~V~~~~~--~~~-~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv 369 (399)
T PF05893_consen 305 -------WTVIVSPE--PPL-LPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGV 369 (399)
T ss_pred -------EEEEECCC--ccc-ccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCC
Confidence 13443322 122 223335588999999999999999887332478887644 445555553 33453
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-13 Score=116.67 Aligned_cols=147 Identities=25% Similarity=0.349 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHH-HCCCeEEeCCcccCCCCceeecEEeccCCCCC
Q 009516 349 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM 427 (533)
Q Consensus 349 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~ 427 (533)
+....+.|++..+.+++-+...++++. ....+++.++++.-. ..|......|- ..|+|+.||+|. +.|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 345666788888889998888888886 566677887777511 12333333332 347999999998 99999
Q ss_pred cccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCC
Q 009516 428 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQ 504 (533)
Q Consensus 428 ~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~ 504 (533)
.++.||+||||+....-.++||+|..+|+++||-...|||.+.+.++++....++|-|.+|.+.. -.+...|-|-+.
T Consensus 79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~~ 156 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDRK 156 (157)
T ss_pred ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999998643 234555666543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.6e-10 Score=104.53 Aligned_cols=173 Identities=21% Similarity=0.230 Sum_probs=129.7
Q ss_pred CcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHH
Q 009516 307 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 386 (533)
Q Consensus 307 ~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~ 386 (533)
.-+||++|.|++.|+..++.+.-.--| ..+.-.|+|||++.|+|+++++.+++.+. +. +.+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~~-----va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------PQ-----VANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------hh-----hccCcHHHH
Confidence 458999999999999999999865443 34667889999999999999999987652 22 122233445
Q ss_pred HHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHc--CCCCcEEE
Q 009516 387 VETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND--TNAGLAAY 464 (533)
Q Consensus 387 ~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~--~~~gL~a~ 464 (533)
-.+.++ ..+++++.+.... ...--.|.++.+.++.. +-. --.+|+++..|++..|++++++. .+|+ +.+
T Consensus 73 sl~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVs 143 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVS 143 (215)
T ss_pred HHHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEE
Confidence 444444 4789999884332 11234689988766542 233 33479999999999999999986 3555 999
Q ss_pred EEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccC
Q 009516 465 IFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGG 501 (533)
Q Consensus 465 v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG 501 (533)
||++-.+.+-.++.+|++..+|||+..+ ..|..++-.
T Consensus 144 iW~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~~~ 181 (215)
T PF07368_consen 144 IWNEKLASAYELAARLPCDTFYINCFNVDLSPIMPFFA 181 (215)
T ss_pred EeCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhhhh
Confidence 9999999999999999999999999876 345555433
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.8e-09 Score=122.98 Aligned_cols=114 Identities=14% Similarity=0.128 Sum_probs=93.9
Q ss_pred ccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecc
Q 009516 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253 (533)
Q Consensus 174 ~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v 253 (533)
.+|+++ |+.+..+..|+|+++||+||| ..++.|++.||++||+||+||++.++. . -+.+|..+.+.+
T Consensus 1063 ~LPGPT-GEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~ 1129 (1208)
T PRK11905 1063 ELPGPT-GESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI 1129 (1208)
T ss_pred cCCCCC-CcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc
Confidence 355554 899999999999999999999 668899999999999999999998762 1 123566555544
Q ss_pred cCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCC
Q 009516 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGG 305 (533)
Q Consensus 254 ~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG 305 (533)
.++..+..+++++.|.|+|++++.+.+.++++++-.+++|++.|..+
T Consensus 1130 -----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~~ 1176 (1208)
T PRK11905 1130 -----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEPT 1176 (1208)
T ss_pred -----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCCC
Confidence 33457788889999999999999999999999988888889988863
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.053 Score=56.60 Aligned_cols=259 Identities=21% Similarity=0.218 Sum_probs=125.6
Q ss_pred CCceeEEEeeeceEEEEEcCC-CcchH-HHHHHHHHHhhcCCEEE--EecCCCchHHHHHHHHHHHHcCCCCCceecccC
Q 009516 180 PDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255 (533)
Q Consensus 180 ~~~~~~~~~~P~GVv~~I~p~-N~P~~-~~~~~l~~ALaaGN~VV--lKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g 255 (533)
+|.....++.|+--|++-.|. .+|+. +.+....||-.+|..=| .-|+...-.....+.-.++.+|+-. ++. + |
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e-vy~-v-G 172 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE-VYK-V-G 172 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE-EEE----
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE-EEe-c-c
Confidence 466777899999999999993 44443 23455779999998544 4555443333444555678888853 222 2 3
Q ss_pred ChhhHHhHHhc----CCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEE--EccCCCHHHHHHHHHHHHh
Q 009516 256 NAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI--VFDDADLNVAVNGALAAKF 329 (533)
Q Consensus 256 ~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~i--V~~dAd~d~aa~~i~~~~f 329 (533)
|.+.-.+|.- -|+||+|+=.|..-+...=..-...- -|=-+-|.+=++ -+++||.++.+.+++..+=
T Consensus 173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V------~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAE 245 (412)
T PF00815_consen 173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDV------GIDMIAGPSEVLVIADETANPEFVAADLLAQAE 245 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-------EES------EEEEEE-TTS-HHHHHHHHHHHHT
T ss_pred -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCc------ccCCCCCCCceEEEECCCCCHHHHHHHHHHHhc
Confidence 4443334332 37899999888877643322222211 111223554444 4457899999999998876
Q ss_pred hccCCccccCCeEEEeh--hhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcc
Q 009516 330 RNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 407 (533)
Q Consensus 330 ~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 407 (533)
....- +-++|.. ...++..+.+.+.+..+. .. +.++.++.
T Consensus 246 Hd~~a-----~~vLvt~s~~la~~V~~~v~~~l~~l~---------------r~-------~i~~~sl~----------- 287 (412)
T PF00815_consen 246 HDPDA-----QAVLVTTSEELAEAVEAEVERQLEELP---------------RR-------EIAEKSLE----------- 287 (412)
T ss_dssp T-TT------EEEEEES-HHHHHHHHHHHHHHHTT-T---------------TH-------HHHHHHHT-----------
T ss_pred cCCCC-----ceEEEECCHHHHHHHHHHHHHHHHhCC---------------ch-------HHHHHHHH-----------
Confidence 65432 2345533 445555555555554431 11 11222221
Q ss_pred cCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-eeEEE
Q 009516 408 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVG 486 (533)
Q Consensus 408 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~V~ 486 (533)
+ -.++.++|.+|+++++|..--= -..|.++|. +.+.++++ +|.|+
T Consensus 288 ---------------------------~---g~ii~~~~l~ea~~~~N~~APE-HLel~~~~~---~~~~~~i~~AGaiF 333 (412)
T PF00815_consen 288 ---------------------------N---GAIIVVDSLEEAIELANEYAPE-HLELQVEDP---EELLEKIRNAGAIF 333 (412)
T ss_dssp ---------------------------T----EEEE-SSHHHHHHHHHHH--S-EEEEESTTH---HHHGGG--S-SEEE
T ss_pred ---------------------------C---CeEEEECCHHHHHHHHHHhhHH-HHHHHHcCH---HHHHHHhhccChhh
Confidence 1 1355679999999999984222 456778887 45677776 99999
Q ss_pred ECCCCC---------CCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 487 VNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 487 iN~~~~---------~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
+..++. .+..+|-+| ..|..|..+...|++.-++
T Consensus 334 lG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~ 376 (412)
T PF00815_consen 334 LGEYTPEALGDYAAGPNHVLPTGG-----TARFSSGLSVDDFLKRISV 376 (412)
T ss_dssp ESTT--HHHHHHTSSS------TT-----GGGT---S-GGGGEEEEEE
T ss_pred cCCCCCHHHhhhccCCCccCCCCc-----cccccCCCcHHHccceeeE
Confidence 997654 133566555 5666666788888876554
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.14 Score=53.21 Aligned_cols=260 Identities=21% Similarity=0.218 Sum_probs=148.6
Q ss_pred CCceeEEEeeeceEEEEEcCCC-cchHH-HHHHHHHHhhcCCEEE--EecCCCchHHHHHHHHHHHHcCCCCCceecccC
Q 009516 180 PDRRLFVLKQPVGVAGAITPWN-FPLAM-ITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255 (533)
Q Consensus 180 ~~~~~~~~~~P~GVv~~I~p~N-~P~~~-~~~~l~~ALaaGN~VV--lKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g 255 (533)
+|.....++.|+--|++-.|.- +|+.+ .+...+||-.+|+.=| +-|+...-.....+.-..+.+|+.+ +--+ |
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e--iy~v-G 158 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE--IYKV-G 158 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE--Eecc-C
Confidence 4777888999999999988853 44433 3455789999998644 4555332122223333457777764 2222 3
Q ss_pred ChhhHHhHHh----cCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEE--ccCCCHHHHHHHHHHHHh
Q 009516 256 NAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV--FDDADLNVAVNGALAAKF 329 (533)
Q Consensus 256 ~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV--~~dAd~d~aa~~i~~~~f 329 (533)
|.+.-.+|. .-|.||+|+=.|..-+...=..-...- -+=-+-|.+=++| +++||.++.+.+++..+=
T Consensus 159 -GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~V------~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAE 231 (390)
T cd06572 159 -GAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGDV------GIDMPAGPSEVLVIADETANPEFVAADLLSQAE 231 (390)
T ss_pred -CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCCc------CccCCCCCceEEEEeCCCCCHHHHHHHHHhhhc
Confidence 333333333 367899998888776533322111110 1111234444443 445899999999888775
Q ss_pred hccCCccccCCeEEEeh--hhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcc
Q 009516 330 RNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 407 (533)
Q Consensus 330 ~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 407 (533)
... . .+-++|.. .+.++..+.+.+.+..+.- . + .++.+..+
T Consensus 232 H~~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~r---------------~---~----~~~~~~~~---------- 274 (390)
T cd06572 232 HDP----D-SQAILVTTSEELAEAVEEEVERQLAELPR---------------R---E----IAAKSLLD---------- 274 (390)
T ss_pred cCC----C-CeEEEEECCHHHHHHHHHHHHHHHHhCCc---------------H---H----HHHHHHHh----------
Confidence 542 1 23355533 4455555555555554410 0 0 11211111
Q ss_pred cCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-eeEEE
Q 009516 408 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVG 486 (533)
Q Consensus 408 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~V~ 486 (533)
+ -.++.++|.+|+++++|..--= -.-|+++|... +..+++ +|.|+
T Consensus 275 ---------------------------~---g~ii~~~~~~eai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGsiF 320 (390)
T cd06572 275 ---------------------------Y---GAIILVDDLEEAIELANEYAPE-HLELQTEDPEE---LLEKIRNAGSIF 320 (390)
T ss_pred ---------------------------C---CEEEEECCHHHHHHHHHhhchh-hheeHhcCHHH---HHhhCccceEEe
Confidence 0 1245678999999999984222 34567777754 666665 99999
Q ss_pred ECCCCC---C------CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 487 VNEGLI---S------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 487 iN~~~~---~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
+..++. + +..+|.|| ..|..|..+.+.|++.-++
T Consensus 321 lG~~tp~a~GDY~aGpNHvLPT~G-----~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 321 LGPYTPEALGDYAAGPNHVLPTGG-----TARFYSGLSVDDFLKRITV 363 (390)
T ss_pred ecCCCchhhhccccCCCCccCCCc-----ceeecCCCCHHHheeccee
Confidence 987654 1 23566555 5566666678888876544
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.18 Score=52.39 Aligned_cols=256 Identities=21% Similarity=0.259 Sum_probs=147.3
Q ss_pred CCCceeEEEeeeceEEEEEcC---CCcchHHHHHHHHHHhhcCCEE--EEecCCCchHHHHHHHHHHHHcCCCCCceecc
Q 009516 179 LPDRRLFVLKQPVGVAGAITP---WNFPLAMITRKVGPALACGCTV--VVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253 (533)
Q Consensus 179 ~~~~~~~~~~~P~GVv~~I~p---~N~P~~~~~~~l~~ALaaGN~V--VlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v 253 (533)
.+|.....++.|+--|++-.| .-||...++ ...||-.+|+.= ++-|++..- ....+.-..+.+|+.. +++ +
T Consensus 105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~-v 180 (425)
T COG0141 105 EPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYK-V 180 (425)
T ss_pred cCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHH-c
Confidence 457778889999999999999 566665544 467999999854 445655433 3333344456666653 121 2
Q ss_pred cCChhhHHhHHhcC----CCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEE--ccCCCHHHHHHHHHHH
Q 009516 254 MGNAPDIGDALLTS----PQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV--FDDADLNVAVNGALAA 327 (533)
Q Consensus 254 ~g~~~~~~~~L~~~----~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV--~~dAd~d~aa~~i~~~ 327 (533)
| |.+.-.+|.-. +.||+|+=.|+.-+...=..-.. ..- += -.-|.+=++| +++||.++.+.+++..
T Consensus 181 -G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g--~V~---ID-~~AGPSEvlViAD~ta~p~~vA~DLLsQ 252 (425)
T COG0141 181 -G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG--VVG---ID-MIAGPSEVLVIADETANPDFVAADLLSQ 252 (425)
T ss_pred -c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC--Ccc---cC-CCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 3 44444556555 78999998888765322111111 110 11 1124444333 4458999999999887
Q ss_pred HhhccCCccccCCeEEEehh--hHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCC
Q 009516 328 KFRNSGQTCVCANRVLVQEG--IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405 (533)
Q Consensus 328 ~f~~~GQ~C~a~~~v~V~~~--i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg 405 (533)
+=..- ..+.++|..+ +.++..+++.+.+..+. + .+...+-+. .
T Consensus 253 AEHd~-----~a~aiLvT~s~~la~~v~~~v~~~l~~l~----------------~--~ei~~~~l~---~--------- 297 (425)
T COG0141 253 AEHDP-----DAQAILVTDSEELAEAVEAAVERQLETLP----------------R--AEIARKALE---N--------- 297 (425)
T ss_pred hhcCC-----CceEEEEeCcHHHHHHHHHHHHHHHHhcc----------------H--HHHHHHHHH---h---------
Confidence 76542 2445666443 33444444444443321 0 111221111 1
Q ss_pred cccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-eeE
Q 009516 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGL 484 (533)
Q Consensus 406 ~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~ 484 (533)
|| .|+..+|++|+++++|..--- -.-|+++|.. .+..+++ +|.
T Consensus 298 -----------------------------~g---~iilv~~l~ea~~~~N~~APE-HLei~~~~p~---~~l~~I~nAGs 341 (425)
T COG0141 298 -----------------------------YG---AIILVDDLDEAVEISNEYAPE-HLELQTENPR---ELLGKIRNAGS 341 (425)
T ss_pred -----------------------------CC---eEEEECCHHHHHHHHHhhChH-hhhhhhcCHH---HHHHHhcccce
Confidence 11 355669999999999984222 3456777765 4666665 999
Q ss_pred EEECCCCC---C------CCCCCccCcCCCCCCCCChHHHHHhhhee
Q 009516 485 VGVNEGLI---S------TEVAPFGGVKQSGLGREGSKYGMDEFLEI 522 (533)
Q Consensus 485 V~iN~~~~---~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~ 522 (533)
|+++.++. + +..+|-+| +-|..|..++..|+..
T Consensus 342 IFlG~~sPe~~GDY~aG~NHVLPT~g-----~AR~~s~L~v~dF~K~ 383 (425)
T COG0141 342 IFLGHYSPESLGDYAAGPNHVLPTSG-----TARFSSGLSVYDFLKR 383 (425)
T ss_pred eeecCCCCccccccccCCCccCCCCc-----cchhcCCccHHHhhhH
Confidence 99998654 1 23456554 4555555566666654
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0029 Score=75.33 Aligned_cols=113 Identities=15% Similarity=0.117 Sum_probs=85.6
Q ss_pred ccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecc
Q 009516 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253 (533)
Q Consensus 174 ~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v 253 (533)
.+|+++ |+.+..+..|+|+|+|+++- ....+.+++.+|++||.||+..++.. . +++ +++|+.+.+.+
T Consensus 1172 ~LPGPT-GE~N~l~l~pRg~vLcl~~~---~~~~~~Ql~Aala~Gn~~v~~~~~~~---~----~~~--~~Lp~~v~~~v 1238 (1318)
T PRK11809 1172 LLPGPT-GERNTYTLLPRERVLCLADT---EQDALTQLAAVLAVGSQALWPDDALH---R----ALV--AALPAAVQARI 1238 (1318)
T ss_pred cCCCCC-CCcceeeccCCCcEEEeCCC---HHHHHHHHHHHHHhCCEEEEeCCchh---H----HHH--HhccHHHHhHh
Confidence 356555 89999999999999999873 33678999999999999988654432 1 222 56999888876
Q ss_pred cCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecC
Q 009516 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLEL 303 (533)
Q Consensus 254 ~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lEl 303 (533)
.-. . ........++.|.|.|.....+.+.++.+++-.+++|++...
T Consensus 1239 ~~~---~-~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv~l~~~~ 1284 (1318)
T PRK11809 1239 QLA---K-DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIVSVQGFA 1284 (1318)
T ss_pred hhc---c-ccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeEEeeccc
Confidence 321 1 223344669999999999999999999999888878787444
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.59 Score=49.11 Aligned_cols=258 Identities=23% Similarity=0.264 Sum_probs=150.7
Q ss_pred CCCceeEEEeeeceEEEEEcCC---CcchHHHHHHHHHHhhcCCEEE--EecCCCchHHHHHHHHHHHHcCCCCCceecc
Q 009516 179 LPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVV 253 (533)
Q Consensus 179 ~~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VV--lKps~~tp~~~~~l~~ll~~aGlP~gvv~~v 253 (533)
.+|.....++.|+--|++-.|. -||... +....||-.+|+.=| +-|+.... ....+.-..+.+|+.. +--+
T Consensus 109 ~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e--Iy~v 184 (425)
T PRK00877 109 APGVRLGQRWRPIERVGLYVPGGKAAYPSSV-LMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE--VYKV 184 (425)
T ss_pred cCCeEEEEEEEehHHeEEEccCCCCCchHHH-HHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe--eecc
Confidence 3466677899999999999996 355443 455789999998644 45553222 2333334567787764 2222
Q ss_pred cCChhhHHhHHh----cCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeee-cCCCCCcEEEc--cCCCHHHHHHHHHH
Q 009516 254 MGNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSL-ELGGNAPCIVF--DDADLNVAVNGALA 326 (533)
Q Consensus 254 ~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~l-ElgG~~~~iV~--~dAd~d~aa~~i~~ 326 (533)
| |.+.-.+|. +-|+||+|+=.|..-+...=..-. .. +-. -+-|.+=++|. ++||.++.+.+++.
T Consensus 185 -G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~-g~------V~ID~~AGPSEvlViAD~~Anp~~vAaDLLa 255 (425)
T PRK00877 185 -G-GAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVF-GV------VGIDMIAGPSEILVIADETADPDFVAADLLS 255 (425)
T ss_pred -C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHc-CC------cCcCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 3 333333443 346899999888876532211111 11 111 22355544443 45899999999988
Q ss_pred HHhhccCCccccCCeEEEe--hhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeC
Q 009516 327 AKFRNSGQTCVCANRVLVQ--EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404 (533)
Q Consensus 327 ~~f~~~GQ~C~a~~~v~V~--~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 404 (533)
.+=.... .+.++|. +.+.++..+.+.+.+..+.- .+.+++++..
T Consensus 256 QAEHd~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~r----------------------~~ia~~sl~~------- 301 (425)
T PRK00877 256 QAEHDPD-----AQSILVTTSEELAEAVAAEVERQLATLPR----------------------AEIARASLEG------- 301 (425)
T ss_pred HhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCCh----------------------HHHHHHHHHh-------
Confidence 8765432 3345553 34455555555555544310 1122222211
Q ss_pred CcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ee
Q 009516 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YG 483 (533)
Q Consensus 405 g~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G 483 (533)
+| .|+.++|.||+++++|..--= -.-|.++|.. .+..+++ +|
T Consensus 302 ------------------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~---~~l~~I~nAG 344 (425)
T PRK00877 302 ------------------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPR---ALLDRIRNAG 344 (425)
T ss_pred ------------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccc
Confidence 11 245679999999999984222 2347778874 4566665 99
Q ss_pred EEEECCCCC---C------CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 484 LVGVNEGLI---S------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 484 ~V~iN~~~~---~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
.|++..++. + +..+|- +|..|..|..+.+.|++.-++
T Consensus 345 aiFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~F~K~~s~ 390 (425)
T PRK00877 345 AIFLGPYTPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSSV 390 (425)
T ss_pred eeccCCCCchhhhhcccCCCcccCC-----CcceeecCCccHHHhccceeE
Confidence 999976543 1 224454 456777777788899876554
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.74 Score=48.40 Aligned_cols=260 Identities=19% Similarity=0.192 Sum_probs=148.7
Q ss_pred CCceeEEEeeeceEEEEEcCC---CcchHHHHHHHHHHhhcCCEEE--EecCCCchHHHHHHHHHHHHcCCCCCceeccc
Q 009516 180 PDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVVM 254 (533)
Q Consensus 180 ~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VV--lKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~ 254 (533)
+|.....++.|+.-|++-.|. -||.. .+....||-.+|+.=| +-|+...-.....+.-..+.+|+.. +--+
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~e--Iy~v- 185 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPST-ALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLYCAKKAGVTH--ILKA- 185 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHH-HHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHHHHHHcCCCe--eecc-
Confidence 566777899999999999996 34443 3455789999998644 4555321012222333557787764 1112
Q ss_pred CChhhHHhHHh----cCCCeeEEEeeCCHHHHHHHHHHhhc-CccccceeeecCCCCCcEEE--ccCCCHHHHHHHHHHH
Q 009516 255 GNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAG-TVKKVCRVSLELGGNAPCIV--FDDADLNVAVNGALAA 327 (533)
Q Consensus 255 g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~-~~k~~~~~~lElgG~~~~iV--~~dAd~d~aa~~i~~~ 327 (533)
| |.+.-.+|. .-|+||+|+=.|..-+...=...... .+. -+=-.-|.+=++| +++||.+.++.+++..
T Consensus 186 G-GaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~~~~V----gID~~AGPSEvlIiAD~tA~p~~vAaDLLaQ 260 (431)
T PLN02926 186 G-GAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNSEAMV----SIDMPAGPSEVLVIADKTANPVHVAADLLSQ 260 (431)
T ss_pred C-CHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCCCCcc----ccCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence 3 333323333 24689999988887764322111111 001 1111234444444 4458999999999888
Q ss_pred HhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCC
Q 009516 328 KFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405 (533)
Q Consensus 328 ~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg 405 (533)
+=.... .+.++|.. .+.++..+.+.+.++.+. + .+..++++..
T Consensus 261 AEHdp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~-------- 305 (431)
T PLN02926 261 AEHGPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP----------------R------GEIASKALGH-------- 305 (431)
T ss_pred hccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHC--------
Confidence 765432 33455533 444555555555544431 0 1122222111
Q ss_pred cccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-eeE
Q 009516 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGL 484 (533)
Q Consensus 406 ~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~ 484 (533)
-.|+.++|.||+++++|..--= -.-|+++|.. .+..+++ +|.
T Consensus 306 ---------------------------------g~iivv~~l~ea~~~~N~~APE-HLei~~~~~~---~~l~~i~nAGa 348 (431)
T PLN02926 306 ---------------------------------SFIVVARDMAEAISFSNLYAPE-HLIVNVEDAE---SWLDKIDNAGS 348 (431)
T ss_pred ---------------------------------CEEEEECCHHHHHHHHHhhChH-hheehhcCHH---HHHhhcCccce
Confidence 1345679999999999984222 2347777774 5666666 999
Q ss_pred EEECCCCC---C------CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 485 VGVNEGLI---S------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 485 V~iN~~~~---~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
|++..++. + +..+|-| |.+|..|..+.+.|++.-++
T Consensus 349 iFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 393 (431)
T PLN02926 349 VFLGRWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 393 (431)
T ss_pred eccCCCCchhhhccccCcCcccCCC-----cceeecCCCcHHHhcceeeE
Confidence 99976543 1 2245554 46677666788888876544
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.84 Score=47.95 Aligned_cols=258 Identities=20% Similarity=0.198 Sum_probs=149.9
Q ss_pred CCceeEEEeeeceEEEEEcCC-CcchHH-HHHHHHHHhhcCCEEE--EecCCCchHHHHHHHHHHHHcCCCCCceecccC
Q 009516 180 PDRRLFVLKQPVGVAGAITPW-NFPLAM-ITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255 (533)
Q Consensus 180 ~~~~~~~~~~P~GVv~~I~p~-N~P~~~-~~~~l~~ALaaGN~VV--lKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g 255 (533)
+|.....++.|+--|++-.|. .+|+.+ .+....||-.+|+.=| +-|+.........|+ ..+.+|+-. ++ -+ |
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e-Iy-~v-G 180 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE-IY-VL-G 180 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe-eh-hc-C
Confidence 466677889999999999995 444432 3456789999998644 445433222222333 457777763 11 12 3
Q ss_pred ChhhHHhHHh----cCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeee-cCCCCCcEEE--ccCCCHHHHHHHHHHHH
Q 009516 256 NAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSL-ELGGNAPCIV--FDDADLNVAVNGALAAK 328 (533)
Q Consensus 256 ~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~l-ElgG~~~~iV--~~dAd~d~aa~~i~~~~ 328 (533)
|.+.-.+|. +-|.||+|+=.|..-+...=..-... +-. -+-|.+=++| +++||.+..+.+++..+
T Consensus 181 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~-------V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQA 252 (426)
T PRK12447 181 -GVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGR-------VGIDLFAGPTETLVIADDTADPELVATDLLGQA 252 (426)
T ss_pred -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCc-------cCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 333223332 24689999988887764322211111 222 1235544444 44589999999998887
Q ss_pred hhccCCccccCCeEEE--ehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCc
Q 009516 329 FRNSGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 406 (533)
Q Consensus 329 f~~~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~ 406 (533)
=.... .+.++| .+.+.++..+.+.+.+..+. + .+.+++++.+
T Consensus 253 EHd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~--------- 296 (426)
T PRK12447 253 EHGPN-----SPAVLITTSRKLAEEVLAEIERLLAILP----------------T------ADVASAAWRD--------- 296 (426)
T ss_pred ccCCC-----CceEEEECCHHHHHHHHHHHHHHHHhCC----------------H------HHHHHHHHHh---------
Confidence 65432 333555 34555565556655555441 0 1222222211
Q ss_pred ccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-eeEE
Q 009516 407 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLV 485 (533)
Q Consensus 407 ~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~V 485 (533)
+| .|+.++|.||+++++|..--= -.-|.++|. +.+..+++ +|.|
T Consensus 297 ----------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAGai 341 (426)
T PRK12447 297 ----------------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNYGAL 341 (426)
T ss_pred ----------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCcccee
Confidence 11 245668999999999985222 234777887 45666666 9999
Q ss_pred EECCCCC---C------CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 486 GVNEGLI---S------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 486 ~iN~~~~---~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
++..++. + +..+|- +|..|..|..+.++|++.-++
T Consensus 342 FlG~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 342 FLGERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred ccCCCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeE
Confidence 9976543 1 224554 456677676788888876543
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.91 Score=47.18 Aligned_cols=284 Identities=21% Similarity=0.217 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCC-C--cchHHHHHHHHHHhhcCCEEE--EecC
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW-N--FPLAMITRKVGPALACGCTVV--VKPS 226 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-N--~P~~~~~~~l~~ALaaGN~VV--lKps 226 (533)
-++.+.+.++.|....... .......+|.....++.|+--|++-.|. . ||... +....||-.+|+.=| +-|+
T Consensus 52 ai~~A~~~I~~fh~~q~~~--~~~~~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStv-LM~aiPAkvAGV~~Iv~~TPp 128 (393)
T TIGR00069 52 ALELAAENIRAFHEAQLPR--SWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPSTV-LMTAIPAKVAGVKEIVVCTPP 128 (393)
T ss_pred HHHHHHHHHHHHHHHhCCC--CeEEecCCCeEEEEEEEEeheEEEEeCCCCCcchHHH-HHhhcchhhcCCCeEEEEeCC
Confidence 3445555555554433211 1111123567778899999999999996 3 44433 455679999998644 4454
Q ss_pred CCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHh----cCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeec
Q 009516 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLE 302 (533)
Q Consensus 227 ~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lE 302 (533)
...-.....+.-..+.+|+.. +--+ | |.+.-.+|. +-|+||+|+=.|..-+...=..-.. . +-..
T Consensus 129 ~~~g~i~p~iL~AA~~~Gv~e--Iy~v-G-GAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g-~------V~ID 197 (393)
T TIGR00069 129 GKDGKINPAVLAAAKLAGVDE--VYKV-G-GAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG-D------VGID 197 (393)
T ss_pred CcCCCCCHHHHHHHHHcCCCe--ehhc-C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC-c------cCcC
Confidence 321112223333557787764 1112 3 333323332 2468999998888776432221111 1 2222
Q ss_pred -CCCCCcEEE--ccCCCHHHHHHHHHHHHhhccCCccccCCeEEE--ehhhHHHHHHHHHHHhhcCccCCCCCCCcccCc
Q 009516 303 -LGGNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 377 (533)
Q Consensus 303 -lgG~~~~iV--~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 377 (533)
+-|.+=++| +++||.++.+.+++..+=.... .+.++| .+++.++..+.+.+.+..+.-
T Consensus 198 ~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~r------------ 260 (393)
T TIGR00069 198 MPAGPSEVLVIADETANPEFVAADLLSQAEHDPD-----AQAILVTTSEELAEAVQEEIERQLATLPR------------ 260 (393)
T ss_pred CCCCCceEEEEeCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCCh------------
Confidence 235554444 4458999999999888755432 334555 345556666666666555410
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcC
Q 009516 378 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 457 (533)
Q Consensus 378 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~ 457 (533)
. +..++++.+ +| .|+.++|.||+++++|..
T Consensus 261 ------~----~i~~~al~~-------------------------------------~g---~ii~v~~l~ea~~~~N~~ 290 (393)
T TIGR00069 261 ------R----EIARKSLED-------------------------------------NG---AIILVDDLEEAIEISNDY 290 (393)
T ss_pred ------H----HHHHHHHHh-------------------------------------CC---EEEEECCHHHHHHHHHhh
Confidence 1 222222221 11 245668999999999984
Q ss_pred CCCcEEEEEcCCHHHHHHHHhhcc-eeEEEECCCCC---C------CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 458 NAGLAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLI---S------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 458 ~~gL~a~v~s~d~~~~~~~a~~l~-~G~V~iN~~~~---~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
--= -.-|+++|.. .+..+++ +|.|++..++. + +..+|-| |..|..|..+.+.|++.-++
T Consensus 291 APE-HLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT~-----G~Ar~~sgL~v~~F~K~~s~ 359 (393)
T TIGR00069 291 APE-HLELQTKNPE---ELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPTG-----GTARFYSGLSVLDFLKRITV 359 (393)
T ss_pred ChH-hheehhCCHH---HHHhhcCccceeccCCCCchhhhhccCCCCcccCCC-----cceeecCCccHHHhccceeE
Confidence 222 2346677774 5666666 99999977554 1 2245544 56677666788888876544
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=1.1 Score=46.84 Aligned_cols=258 Identities=19% Similarity=0.197 Sum_probs=149.9
Q ss_pred CCceeEEEeeeceEEEEEcCC-CcchHH-HHHHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHcCCCCCceecccC
Q 009516 180 PDRRLFVLKQPVGVAGAITPW-NFPLAM-ITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255 (533)
Q Consensus 180 ~~~~~~~~~~P~GVv~~I~p~-N~P~~~-~~~~l~~ALaaGN~VVl--Kps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g 255 (533)
+|.....++.|+--|++-.|. .+|+.+ .+....||-.+|+.=|+ -|++... ....+.-..+.+|+.. +--+ |
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~e--Iy~i-G 175 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQ--VFQV-G 175 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCCe--eecc-C
Confidence 456667789999999999995 444432 34557899999986544 4543311 2223333457777764 2222 3
Q ss_pred ChhhHHhHHh----cCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeee-cCCCCCcEEE--ccCCCHHHHHHHHHHHH
Q 009516 256 NAPDIGDALL----TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSL-ELGGNAPCIV--FDDADLNVAVNGALAAK 328 (533)
Q Consensus 256 ~~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~l-ElgG~~~~iV--~~dAd~d~aa~~i~~~~ 328 (533)
|.+.-.+|. +-|+||+|+=.|..-+...=...... +-. -+-|.+=++| +++||.++.+.+++..+
T Consensus 176 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~-------V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQA 247 (416)
T PRK13770 176 -GAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQ-------VGIDQIAGPTEIALIIDETADLDAIVYDVFAQA 247 (416)
T ss_pred -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCC-------cCcCCCCCCceeEEEecCCCCHHHHHHHHHHHh
Confidence 333323332 25689999988877663322211111 111 1235444444 45589999999998877
Q ss_pred hhccCCccccCCeEEE--ehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCc
Q 009516 329 FRNSGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 406 (533)
Q Consensus 329 f~~~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~ 406 (533)
=.... .+.++| .+.+.++..+.+.+.+..+.- . +.+++++.+
T Consensus 248 EHd~~-----a~~iLvT~s~~la~~V~~ev~~ql~~lpr------------------~----~i~~~al~~--------- 291 (416)
T PRK13770 248 EHDEL-----ARTYVISEDAQVLKDLESRIAKALPNVDR------------------Y----DIVSKSIAN--------- 291 (416)
T ss_pred ccCCC-----CcEEEEeCCHHHHHHHHHHHHHHHHhCCh------------------H----HHHHHHHHh---------
Confidence 65432 334555 345556666666666555420 1 122222211
Q ss_pred ccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-eeEE
Q 009516 407 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLV 485 (533)
Q Consensus 407 ~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~V 485 (533)
+| .++-++|.||+++++|..-.= -.-|.++|.. .+..+++ +|.|
T Consensus 292 ----------------------------~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGai 336 (416)
T PRK13770 292 ----------------------------QH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQ---PYIEKVKYVGAL 336 (416)
T ss_pred ----------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhCCEecee
Confidence 11 245669999999999985322 2347778874 5667776 9999
Q ss_pred EECCCCC---C------CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 486 GVNEGLI---S------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 486 ~iN~~~~---~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
++..++. + +..+|-| |..|..|..+.+.|++.-++
T Consensus 337 FlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 380 (416)
T PRK13770 337 FIGHYSPEVIGDYVAGPSHVLPTN-----RTARFTNGLSVNDFLTRNTV 380 (416)
T ss_pred ccCCCCchhhhccccCCCCcCCCC-----cceeccCCCcHHHeecceee
Confidence 9976554 1 2245554 45666666688888876544
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=1.1 Score=46.32 Aligned_cols=271 Identities=18% Similarity=0.113 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchH
Q 009516 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231 (533)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~ 231 (533)
-+..+.+.++.|........ ... ..+|.....++.|+--|++-.|.-||. +.+....||-.+|+.=|+-.+|-..
T Consensus 58 ai~~a~~~I~~fh~~q~~~~-~~~--~~~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~- 132 (368)
T PRK13769 58 AALEAAKSLEALYSRLKPPE-AVD--FYGGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRG- 132 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCC-eEe--cCCCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCC-
Confidence 34555556655554332211 111 235777788999999999999965554 3445678999999865543322111
Q ss_pred HHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeec-CCCCC-cE
Q 009516 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLE-LGGNA-PC 309 (533)
Q Consensus 232 ~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lE-lgG~~-~~ 309 (533)
....+.-.++.+|+.. +--+ | |.+.-.++...-+||+|+=.|..-+...=...... +-.. +-|.+ -+
T Consensus 133 i~p~vL~aa~~~Gv~e--Iy~v-G-GAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~-------V~ID~~AGPSEvl 201 (368)
T PRK13769 133 VTGELLAVAKELGVKG--VLAI-G-GPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQY-------VGIDGIEGPTELV 201 (368)
T ss_pred CCHHHHHHHHHcCCCe--eecc-c-CHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCC-------cCCCCcCCCcceE
Confidence 2222333567777764 2222 3 33333455555589999988887764332221111 1111 12433 34
Q ss_pred EEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHH
Q 009516 310 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 389 (533)
Q Consensus 310 iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~ 389 (533)
|+-++||.++.+.+++..+=.... .+.++|..+ .++.++..+++.+.
T Consensus 202 ViAD~a~p~~vAaDLLaQAEH~~~-----a~~iLvT~s--~~la~~V~~~v~~~-------------------------- 248 (368)
T PRK13769 202 VYAEGVPPEVAVRGALAQLEHGPT-----SFAYLLSTD--AELLKAAEEIYRRE-------------------------- 248 (368)
T ss_pred EEcCCCCHHHHHHHHHHHhhcCCC-----CcEEEEECC--HHHHHHHHHHHHHH--------------------------
Confidence 555569999999888877654322 344555444 35555554443320
Q ss_pred HHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcC-CCCcEEEEEcC
Q 009516 390 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT-NAGLAAYIFTN 468 (533)
Q Consensus 390 ~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~-~~gL~a~v~s~ 468 (533)
+.. . . + . ..|+.++|.||+++++|.. +-+|... +.
T Consensus 249 -~~~-----~--------~--~-~-------------------------~~iivv~~leeai~~~N~~APEHLel~--~~ 284 (368)
T PRK13769 249 -RTS-----S--------M--G-P-------------------------LEVRKVAGVEEAVRFIDEIAPEHLEVW--GR 284 (368)
T ss_pred -HHh-----c--------C--C-C-------------------------CeEEEECCHHHHHHHHHhhChHheEee--Cc
Confidence 100 0 0 0 0 2467789999999999984 3445443 31
Q ss_pred CHHHHHHHHhhcc-eeEEEECCCCC-C------CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 469 NLQRTWRVSEALE-YGLVGVNEGLI-S------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 469 d~~~~~~~a~~l~-~G~V~iN~~~~-~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
+.+..+++ +|.|+++++.. + +..+|-| |..|..|..+...|++.-++
T Consensus 285 -----~~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~t~ 339 (368)
T PRK13769 285 -----REVAYRVRNVGAVSVNMPSPYLDYVAGISHVLPTG-----GTARWRGIITPLTFMKPIGV 339 (368)
T ss_pred -----HHHHhhCCccCChhcCCchhhhccccCCCCcCCCC-----cceeccCCCcHHHcccceeE
Confidence 22555665 89999976433 1 2245544 45666666678888765543
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=87.32 E-value=0.1 Score=55.19 Aligned_cols=142 Identities=18% Similarity=0.128 Sum_probs=96.2
Q ss_pred cCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEE---EEeeCCHHHHHHHHH
Q 009516 379 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAP---LLCFKTEEEAIHMAN 455 (533)
Q Consensus 379 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~---v~~~~~~~eai~~~n 455 (533)
.+..+..++...+.+++++++.++...... +.|.++.++...+++.....++ .|++..- ........+.+...+
T Consensus 79 ~~~~~R~~~L~~~Adlie~~~~~lA~~E~~-d~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~ 155 (501)
T KOG2450|consen 79 RDAAERGRLLRKLADLIEQDADVLAALEVL-DNGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTR 155 (501)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHhhhccc-ccCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEec
Confidence 367788889999999898888888777665 3567788888777777776665 4455442 334445567778888
Q ss_pred cCCCCcEEEEEcCC---HHHHHHHHhhcceeEEEECCCCCCCC--------CCCccCcC------CCCCCCCChHHHHHh
Q 009516 456 DTNAGLAAYIFTNN---LQRTWRVSEALEYGLVGVNEGLISTE--------VAPFGGVK------QSGLGREGSKYGMDE 518 (533)
Q Consensus 456 ~~~~gL~a~v~s~d---~~~~~~~a~~l~~G~V~iN~~~~~~~--------~~PfGG~~------~SG~G~~gg~~~l~~ 518 (533)
..+.|..+.|---| .-.+++++-.|.+|+++||-+....| ....-|.. -+|.|++-|..-..+
T Consensus 156 ~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH 235 (501)
T KOG2450|consen 156 REPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASH 235 (501)
T ss_pred CCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhC
Confidence 99999666655555 45688999999999999998765433 11222222 367777766554444
Q ss_pred hheee
Q 009516 519 FLEIK 523 (533)
Q Consensus 519 ~~~~k 523 (533)
+--.|
T Consensus 236 ~dv~k 240 (501)
T KOG2450|consen 236 PDVDK 240 (501)
T ss_pred CCCce
Confidence 43333
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=84.76 E-value=8.5 Score=41.58 Aligned_cols=108 Identities=18% Similarity=0.189 Sum_probs=74.1
Q ss_pred cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceeccc
Q 009516 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 254 (533)
Q Consensus 175 ~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~ 254 (533)
+|+.. |+.+.....|.|-|+++.+ +....+.+++.+|+.||.+++-+.... ++++. .+|.++-..+.
T Consensus 629 LpGpt-GErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~~--~l~~~v~~~~~ 695 (769)
T COG4230 629 LPGPT-GERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALLK--DLPSAVASRIQ 695 (769)
T ss_pred cCCCc-ccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHHH--hchhhhhhhee
Confidence 44443 7889999999999999865 677788999999999999998665522 22222 25554433322
Q ss_pred CChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceee
Q 009516 255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVS 300 (533)
Q Consensus 255 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~ 300 (533)
-.+ .. ...-.++.+.|-|.++-.+.+.+..+....|++++.
T Consensus 696 ~~~----~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~ 736 (769)
T COG4230 696 VAK----DW-TADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQ 736 (769)
T ss_pred ecc----ch-hhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEee
Confidence 111 12 333458889999999999999988777767733333
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 533 | ||||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-161 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-161 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-155 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-153 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-147 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-145 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-97 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-93 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 3e-92 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-90 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 8e-90 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-89 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-87 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 2e-87 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 5e-87 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-85 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-83 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 2e-83 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 2e-83 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 2e-83 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 5e-83 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 5e-83 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 7e-83 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 7e-83 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 8e-83 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-82 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-82 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 2e-82 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 3e-82 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-82 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 6e-82 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 7e-82 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 9e-82 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 1e-81 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-81 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-81 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 6e-81 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 3e-80 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 4e-80 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-79 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 6e-79 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-78 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 3e-78 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 4e-78 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 8e-78 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-77 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 3e-75 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-75 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 3e-74 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 5e-74 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 2e-72 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-70 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-67 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-66 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 2e-66 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 2e-65 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 1e-63 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 3e-63 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 8e-63 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 2e-62 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 5e-62 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 3e-56 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 3e-55 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 6e-55 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 4e-53 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 6e-53 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 9e-53 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-52 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 3e-50 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-50 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-49 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 7e-49 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-44 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 2e-43 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-42 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 5e-41 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 1e-39 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 5e-37 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 6e-34 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-30 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 5e-29 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-26 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 8e-26 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-25 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-25 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 2e-18 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 3e-18 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 3e-18 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 5e-18 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 3e-17 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 4e-16 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 1e-07 |
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 533 | |||
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 0.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 0.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 0.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 0.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 0.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 0.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 0.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 0.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 0.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 0.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 0.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 0.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 0.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 0.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 0.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 0.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 0.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-167 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-149 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-142 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 1e-121 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 1e-118 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 1e-113 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-112 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-103 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 4e-89 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 4e-87 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 4e-78 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 909 bits (2353), Expect = 0.0
Identities = 275/483 (56%), Positives = 364/483 (75%), Gaps = 3/483 (0%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 1 KLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL 60
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AE
Sbjct: 61 PAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE 120
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 121 EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 180
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP +ALA AELA++AG+P GV NVV G+A +G+ L ++P VRK++FTGST +G++L
Sbjct: 181 ASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL 240
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
M A +KK VSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ
Sbjct: 241 MEQCAKDIKK---VSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQ 297
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
+G+Y++FA+ +A+ L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG
Sbjct: 298 DGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGG 357
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+ H G F++PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY
Sbjct: 358 KAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYF 417
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ +L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+
Sbjct: 418 YARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYM 477
Query: 526 CLG 528
C+G
Sbjct: 478 CIG 480
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 906 bits (2345), Expect = 0.0
Identities = 273/483 (56%), Positives = 361/483 (74%), Gaps = 3/483 (0%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
++D LLR Q IGG+W A T EV +PATGE + V MG ET AI +A A+
Sbjct: 4 SMKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAW 63
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
W TA ER+ LR+W+DL++A+ ++L ++T EQGKPL EA GE+ Y A FIE++AE
Sbjct: 64 AGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAE 123
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KRV G+ +P ++R+ V+K+P+GV AITPWNFP AMI RKVGPALA GC +VVKP
Sbjct: 124 EGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKP 183
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+E TP +ALA A LA +AG+P GV++VV+G+ IG + ++P VRK++FTGSTAVG+ L
Sbjct: 184 AESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL 243
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
MA +A TVKK ++LELGGNAP IVFDDADL+ AV GA+A+K+RN+GQTCVC NR V
Sbjct: 244 MAQSAPTVKK---LTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVH 300
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
E +Y+ FAD + AV LKVG G G GPLIN+AA++KVE+ + DA++KGA ++ GG
Sbjct: 301 ERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGG 360
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+RH+LG F+EPTVL+ VK +M V++EE FGP+APL F +EEE + +ANDT GLAAY+
Sbjct: 361 KRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYL 420
Query: 466 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
++ ++ R WRV+EALEYG+VG+N GLIS EVAPFGGVKQSGLGREGS YG+D+++ IKY+
Sbjct: 421 YSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYL 480
Query: 526 CLG 528
C+
Sbjct: 481 CVA 483
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 901 bits (2331), Expect = 0.0
Identities = 282/503 (56%), Positives = 364/503 (72%), Gaps = 5/503 (0%)
Query: 26 QSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIAN 85
+ + + L+D LL++Q L+ G+WIDA DG T++V NPA G VI
Sbjct: 4 HHHHHMGTLEAQTQGPGSMLALKDPSLLKSQCLVNGRWIDAADGTTIKVTNPADGSVIGT 63
Query: 86 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP 145
V + K+AI ++ A + W+ TA ER+ LRKW+DL++A+ +++ ++T EQGKP
Sbjct: 64 VPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKP 123
Query: 146 LKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLA 205
L EA GEV Y A FIE++AEEAKRVYG+ IPA +RL V++QPVGV AITPWNFP A
Sbjct: 124 LAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAA 183
Query: 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL 265
MITRK PALA GCT++V+P++ TPLTALA LA +AGIP GV+ +V G A +IG L
Sbjct: 184 MITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELT 243
Query: 266 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGAL 325
++ VRK++FTGST VG+ LMA A T+K+ +SLELGGNAP IVFDDADL+ AV+GA+
Sbjct: 244 SNDTVRKLSFTGSTEVGRLLMAQCAPTIKR---ISLELGGNAPFIVFDDADLDAAVDGAM 300
Query: 326 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALE 385
+K+RN+GQTCVCANR+ VQ G+Y+KFA+ + VK LKVG+G GVV GP+I + A+
Sbjct: 301 VSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAIT 360
Query: 386 KVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 445
KV+ +EDAVSKGAK++ GG+ LG F+EP +L+ V S+MLV++EE FGP+APL F
Sbjct: 361 KVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFD 418
Query: 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQS 505
TEEE I ANDT GLAAY +T N R RVSEALEYG+VG N GLIS EVAPFGGVKQS
Sbjct: 419 TEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQS 478
Query: 506 GLGREGSKYGMDEFLEIKYVCLG 528
GLGREGSKYG++E+LE KY+C
Sbjct: 479 GLGREGSKYGIEEYLETKYICSA 501
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 896 bits (2318), Expect = 0.0
Identities = 280/489 (57%), Positives = 364/489 (74%), Gaps = 9/489 (1%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF
Sbjct: 4 AGLSAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAF 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
W +++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++E
Sbjct: 62 CRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
EA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP
Sbjct: 122 EARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVG 282
+E TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST G
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTG 241
Query: 283 KKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 342
K L+ AA +VK+ VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+
Sbjct: 242 KILLHHAANSVKR---VSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQF 298
Query: 343 LVQEGIYEKFADAFSKAV-KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 401
LVQ GI++ F AF++A+ KNL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V
Sbjct: 299 LVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATV 358
Query: 402 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 461
+ GG+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GL
Sbjct: 359 VTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGL 418
Query: 462 AAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE 521
A Y ++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE
Sbjct: 419 AGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLE 478
Query: 522 IKYVCLGDM 530
+KYVC G +
Sbjct: 479 LKYVCYGGL 487
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 896 bits (2317), Expect = 0.0
Identities = 212/487 (43%), Positives = 286/487 (58%), Gaps = 4/487 (0%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+ L G IGG+W D+ G T +V+NPATG VIA V M ++ A+ + A
Sbjct: 3 MIESPLLENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSAL 62
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+ R K L D L ++EE+G+++ +E GKP KEA GEVDY A F ++ A+
Sbjct: 63 RLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAK 122
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
+ IP D V +PVGV G I PWNFP+ MI +K+ ALA GC V+KP
Sbjct: 123 HISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKP 182
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TPLT +A + + +P G+VN+VMG A IG L V ++FTGST VG+KL
Sbjct: 183 ASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKL 242
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
+ A VKK ++LELGGNAP IVFDDADL A + +A KFR GQTCVCANR+ V
Sbjct: 243 IVDTAEQVKK---LALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVH 299
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
E + + F ++ V + VGDG +G+ GPLINK +KV+ ++DA+ KGA ++ G
Sbjct: 300 EKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGK 359
Query: 406 RRHSLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 464
+ LG F+ PTV+ V EM +EE FGP+ P+ F+TEEE I NDT GLA+Y
Sbjct: 360 QPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASY 419
Query: 465 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524
+FT + +R RV+ L +G VG N G T APFGG+K SG+GREG G+ EF+E +
Sbjct: 420 VFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQT 479
Query: 525 VCLGDMN 531
V G
Sbjct: 480 VPRGFAE 486
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 890 bits (2303), Expect = 0.0
Identities = 178/489 (36%), Positives = 273/489 (55%), Gaps = 7/489 (1%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
++D IGG+++ + + T+++ +P+TG+VI + + ++A+ A A
Sbjct: 5 VQDLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK 64
Query: 107 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
+W+KLTA R LR + + + +K L ++ EQGK L A EVD A FI++ +
Sbjct: 65 AWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDN 124
Query: 167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226
A + G+I+P+ D ++++ K P GV IT WNFPLA+ RK+GPAL G T+V+KP+
Sbjct: 125 ALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPT 184
Query: 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
+ TPL +A +AG+P GV+NV+ G +G L SP + IT TGST GK++
Sbjct: 185 QETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244
Query: 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE 346
+A + V LELGG AP +V DDADL+ A AL +F N GQ C C R+ V
Sbjct: 245 KTSAEYMTP---VMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHA 301
Query: 347 GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 406
+Y++F F VK LKVGD GP N+ ++ ++ V +A+ +GA V GG+
Sbjct: 302 SVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGK 361
Query: 407 RHSL----GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 462
++ G +YEPTVL +VK + +V EE FGP+ P++ + E+AI ND+ GL+
Sbjct: 362 TATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLS 421
Query: 463 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 522
AY+ T + + LE G V +N G+ G KQSG G E K+G++++LE
Sbjct: 422 AYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEK 481
Query: 523 KYVCLGDMN 531
K V + +
Sbjct: 482 KTVYINEAE 490
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 876 bits (2266), Expect = 0.0
Identities = 186/480 (38%), Positives = 277/480 (57%), Gaps = 4/480 (0%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
S ++ I G+++ ++V NPAT VI+ + ++ + AI +A A W
Sbjct: 2 SVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWE 61
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
L A ER+ LRK + E+ LI E GK + A EV + A +I++ AE A+R
Sbjct: 62 ALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARR 121
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
GEII + P + + K+ +GV I PWNFP +I RK+ PAL G T+V+KPSEFT
Sbjct: 122 YEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFT 181
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P A+A A++ + G+P GV N+V+G +G L +P+V ++ TGS + G+K+MA A
Sbjct: 182 PNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA 241
Query: 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 349
A + K V LELGG AP IV DDADL +AV + ++ NSGQ C CA RV VQ+GIY
Sbjct: 242 AKNITK---VCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIY 298
Query: 350 EKFADAFSKAVKNLKVGDGFGEG-VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 408
++F + +A++ ++ G+ + GPLIN AALE+VE V AV +GA+V GG+
Sbjct: 299 DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAV 358
Query: 409 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468
+Y PT+L +V+ EM + EE FGPV P++ F T E+AI MAND++ GL + I+T
Sbjct: 359 EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQ 418
Query: 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528
NL + + L++G +N G ++SG+G K+G+ E+L+ + V L
Sbjct: 419 NLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 824 bits (2130), Expect = 0.0
Identities = 162/488 (33%), Positives = 243/488 (49%), Gaps = 15/488 (3%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
+ L G+W+++ G+ + + PA+G + ++ + +E DAI A DA
Sbjct: 4 ALQTEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK 63
Query: 107 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
W ER L W DLL KE +G+LI E KP K A+GEV A I A+E
Sbjct: 64 IWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADE 123
Query: 167 AKRVYGEIIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 221
A R+ GE + + V ++P+GV AI+P+N+P+ + K+ PAL G TV
Sbjct: 124 ALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183
Query: 222 VVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
V KP+ L+ + E AG P G++ VV G IGD L+ P + ITFTG T
Sbjct: 184 VFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTT 243
Query: 282 GKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR 341
G+++ A + V LELGG P IV DDADL + + ++ F SGQ C R
Sbjct: 244 GERISEKA--KMIP---VVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKR 298
Query: 342 VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 401
V VQ+ + ++ + V+ L VG + P+I++ + ++ ++DA+ GA +
Sbjct: 299 VFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATL 357
Query: 402 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 461
L G +R PT+L +V M V+ EE FGPV P++ K EAI ++N ++ GL
Sbjct: 358 LSGNKRQG---NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGL 414
Query: 462 AAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFL 520
A IFT + R + + LE G V +N + PF GVK+SGLG +G K +
Sbjct: 415 QASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMT 474
Query: 521 EIKYVCLG 528
+ L
Sbjct: 475 RERVTVLN 482
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 810 bits (2094), Expect = 0.0
Identities = 177/476 (37%), Positives = 262/476 (55%), Gaps = 20/476 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I GKWI+ + ++V NP + EVI + + +E K+AI +A L +R
Sbjct: 3 FIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY 59
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
L + KEEL +++ ++ GKP+K+A EV+ + A K E+IP+
Sbjct: 60 NILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS 119
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
DR +F ++PVG+ GAITP+NFPL + K+ PA+A G +V PS PL + A
Sbjct: 120 --DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELA 177
Query: 238 ELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
++ A +P GV N++ G +GD ++ + +V I+FTGS+ VG+ + A
Sbjct: 178 KIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--F 235
Query: 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 353
KK+ +LELGG P IV DADLN AVN + F +GQ C+ +LV E I +KF
Sbjct: 236 KKI---ALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFI 292
Query: 354 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 413
+ F K L VG+ E GPLI+ E VE VE A+ +G K+LLGG+R
Sbjct: 293 EMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK---A 349
Query: 414 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 473
+ PT+L V + ++ + E F PV P++ EEE I +AN T GL + IFTN++ ++
Sbjct: 350 LFYPTIL-EVDRDNILCKTETFAPVIPIIRT-NEEEMIDIANSTEYGLHSAIFTNDINKS 407
Query: 474 WRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528
+ +E LE+G V +N+ L + PFGGVK+SGLGREG KY M+E IK + +
Sbjct: 408 LKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 809 bits (2093), Expect = 0.0
Identities = 153/482 (31%), Positives = 265/482 (54%), Gaps = 9/482 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAA 114
+ I GKW G+T ++ NP VI S GK+ +DA A A W+K T
Sbjct: 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTE 66
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-E 173
+R L+K L +++++ +I E G + ++ E++ ++ + G +
Sbjct: 67 DRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVK 126
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233
+P+ + + + + P+GV +I+P+NFP+ + R + PA+A G +VV KP T ++
Sbjct: 127 EVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISG 186
Query: 234 LAA-AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
A+ AG+P GV+NV++ + +IGD +LT+P R I+FTGSTAVG+ + A
Sbjct: 187 GTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246
Query: 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 352
K++ +LELGGN P V DAD++ AV+ A+ KF + GQ C+ NR++V + +Y++F
Sbjct: 247 FKRM---ALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEF 303
Query: 353 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 412
+ F+ VK L GD V GPLIN+ +EK +E A + G ++ + G+R
Sbjct: 304 VEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVG--- 360
Query: 413 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472
P V + +++ E+F P+A ++ +++EAI MANDT GL++ +FT++L++
Sbjct: 361 NVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEK 420
Query: 473 TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 531
+ + ++ G+ VN+ ++ FGG K SG+GR G+ + ++EF K++ +
Sbjct: 421 GEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQY 480
Query: 532 RK 533
RK
Sbjct: 481 RK 482
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 808 bits (2090), Expect = 0.0
Identities = 156/481 (32%), Positives = 248/481 (51%), Gaps = 17/481 (3%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
+ + + G+W + ++++ PA+G + +V M +E +SA A +W L+
Sbjct: 4 QYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSY 61
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
ER+ L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE
Sbjct: 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 121
Query: 174 IIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
++ A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP
Sbjct: 122 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 181
Query: 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288
++ L AE +AG+P GV N + G +IGD ++ V I FTGST +G+++
Sbjct: 182 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241
Query: 289 AAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 348
A ++ + LELGG IV +DADL + +A F SGQ C RVLV E +
Sbjct: 242 AG--MRP---IMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 349 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 408
++ + + V L +G+ + PLI+ + + VE + DA KGA L +R
Sbjct: 297 ADELVEKIREKVLALTIGNPE-DDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 409 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN
Sbjct: 356 G---NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTN 412
Query: 469 NLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
+ R + ++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 413 DFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
Query: 528 G 528
Sbjct: 473 D 473
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 793 bits (2050), Expect = 0.0
Identities = 149/489 (30%), Positives = 243/489 (49%), Gaps = 19/489 (3%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NS 107
G+ + G+W + G+ +EV +P IA V +E + + F S
Sbjct: 13 KGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWS 70
Query: 108 WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA 167
+ ER LRK D++ + + +++ + GKP AVGEV + +
Sbjct: 71 ARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDL 130
Query: 168 KRVYGEIIPATLP----DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV 223
K++ G+ IP + V ++P+GV AITP+N+PL K+ + G VVV
Sbjct: 131 KKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVV 190
Query: 224 KPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283
KPS PL A A + L AG PP + ++ + ++ +V ++FTGST VG+
Sbjct: 191 KPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGE 249
Query: 284 KLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL 343
+++ VK+ +ELGG P IV +DADL++A + + +GQ C VL
Sbjct: 250 RVVKVGG--VKQY---VMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL 304
Query: 344 VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 403
+ +Y K + +K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL
Sbjct: 305 AERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA 364
Query: 404 GGRRHSLGMTFYEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 460
GGRR LG T+ +PT + ++ +M++ + EVF PVA + K ++AI +AN G
Sbjct: 365 GGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYG 422
Query: 461 LAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEF 519
L A +F ++ + R LE G + +N+ PFGG K+SG+ REG Y ++
Sbjct: 423 LDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAV 482
Query: 520 LEIKYVCLG 528
K +
Sbjct: 483 TAYKTIVFN 491
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 791 bits (2044), Expect = 0.0
Identities = 165/488 (33%), Positives = 261/488 (53%), Gaps = 10/488 (2%)
Query: 44 TDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD 103
+G+ T+ LIGG+W++ + NP VIA + A +A
Sbjct: 2 VVTATFAGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKK 61
Query: 104 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFY 163
A W+ AAERS + + +LL H+EE+ + + E G +A E+ +
Sbjct: 62 AQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKES 121
Query: 164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV 223
A RV+G I P+ P + V + GV G I+PWNFPL + R V PALA G VV+
Sbjct: 122 ASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVI 181
Query: 224 KPSEFTPLTALA-AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
KP+ TP+T A + +AG+P GV++ V G +IGD +T + I+FTGST VG
Sbjct: 182 KPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVG 241
Query: 283 KKLM--AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCAN 340
+++ A G +K V+LELGGNAP +V DAD++ A A F + GQ C+ N
Sbjct: 242 RRVGELAINGGPMKT---VALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSIN 298
Query: 341 RVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 400
RV+V ++++F + F +AVKN+ GD EG + GP+IN + L ++ +E A +GA
Sbjct: 299 RVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGAT 358
Query: 401 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 460
V + G P V S+V S+M ++REE+FGP+ +L E A +AN ++ G
Sbjct: 359 VQVEGPIEG---RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFG 415
Query: 461 LAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEF 519
L+A +++ ++ R + + ++ G+V +N+ ++ E FGG K SGLGR + ++EF
Sbjct: 416 LSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEF 475
Query: 520 LEIKYVCL 527
+++ +
Sbjct: 476 TTDRWIGI 483
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 748 bits (1933), Expect = 0.0
Identities = 142/488 (29%), Positives = 237/488 (48%), Gaps = 14/488 (2%)
Query: 47 LRDSGLLR-TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
L++ GL +G+ G W G+ + + PA E IA V + ++ + A +A+
Sbjct: 15 LKELGLREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAW 72
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
W+ + A +R + +R+ D L + LG L++LE GK L E VGEV ++
Sbjct: 73 KIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVG 132
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
++ + G I+P+ L PVG+ G IT +NFP+A+ A+ CG + K
Sbjct: 133 LSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKG 192
Query: 226 SEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
+ T L ++A ++ + +P + ++ G DIG A+ +V ++FTGST V
Sbjct: 193 APTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQV 251
Query: 282 GKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR 341
GK++ + LELGGN I F+DADL++ V AL A +GQ C A R
Sbjct: 252 GKQVGLMVQERFGR---SLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARR 308
Query: 342 VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 401
+ + E I+++ + KA ++VG+ + V+ GPL K A+ VE+A +G V
Sbjct: 309 LFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTV 368
Query: 402 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 461
+ GG+ + EPT+++ + + ++ E F P+ + F+ EEE N+ GL
Sbjct: 369 VYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGL 428
Query: 462 AAYIFTNNLQR--TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDE 518
++ IFT +L R W + + G+V VN E+ FGG K +G GRE +
Sbjct: 429 SSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQ 488
Query: 519 FLEIKYVC 526
++
Sbjct: 489 YMRRSTCT 496
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 745 bits (1927), Expect = 0.0
Identities = 141/475 (29%), Positives = 225/475 (47%), Gaps = 9/475 (1%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
S + + I G+W+ G+TLE +P V+ + + A+ +A +AF +W+
Sbjct: 1 SNAMMSTHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWA 59
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+ +R + L ++ L + +EL ++I E GKPL E+ EV + + +
Sbjct: 60 RRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRE 119
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
GE L D + +P GV P+NFP + + PAL G VV KPSE T
Sbjct: 120 RTGEKSG-PLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELT 178
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P A + +QAG+P GV+N+V G + G AL + + FTGS+ G L +
Sbjct: 179 PKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQF 237
Query: 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 349
G +K ++LE+GGN P +V + ADL+ AV + + F ++GQ C CA R+LV +G +
Sbjct: 238 GGQPQK--ILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAW 295
Query: 350 -EKFADAFSKAVKNLKVGDGFGEGVVQ-GPLINKAALEKVETFVEDAVSKGAKVLLGGRR 407
+ L+VG + G +I+ +A E + E + KGA+ LL +
Sbjct: 296 GDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQ 355
Query: 408 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467
G P +L +V + EE FGP+ ++ + AI AN T GLAA + +
Sbjct: 356 PIDGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLS 414
Query: 468 NNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLE 521
++ +R + G+V N+ L + APFGG+ SG R + Y D
Sbjct: 415 DSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAY 469
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 703 bits (1816), Expect = 0.0
Identities = 162/462 (35%), Positives = 245/462 (53%), Gaps = 5/462 (1%)
Query: 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM 128
NPATG+ +A + +E + A+S A F W + A+R++ LR L
Sbjct: 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALR 65
Query: 129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK 188
AH EE+ Q IT E GKP+K+A EV A ++YAE + P + +++ +
Sbjct: 66 AHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEY 124
Query: 189 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPG 248
+P+GV AI PWNFPL + R P L G + ++K + A A + +AG P G
Sbjct: 125 RPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAG 184
Query: 249 VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAP 308
V V N + ++ P++ +T TGS G + A A +KK LELGG+ P
Sbjct: 185 VYGWVNANNEGVSQ-MINDPRIAAVTVTGSVRAGAAIGAQAGAALKKC---VLELGGSDP 240
Query: 309 CIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 368
IV +DADL +AV A+A +++N+GQ C A R +V+EGI + F D F A LK+GD
Sbjct: 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDP 300
Query: 369 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEML 428
E GP+ +++ V+ +V++GA++LLGG + + +Y TVL++V +M
Sbjct: 301 LVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMT 360
Query: 429 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN 488
R+E+FGPVA + K A+ +AND+ GL+A IFT + ++ LE G V +N
Sbjct: 361 AFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFIN 420
Query: 489 EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 530
S FGGVK+SG GRE S +G+ EF ++ V +
Sbjct: 421 GYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNRV 462
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 695 bits (1797), Expect = 0.0
Identities = 137/463 (29%), Positives = 226/463 (48%), Gaps = 5/463 (1%)
Query: 71 TLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130
+ NP T E A+ K+ +AI+ A + W A R++ L + L H
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEH 64
Query: 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQP 190
++EL +++TLE GK L E+ EV+ +YA+ + + + LKQ
Sbjct: 65 EDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQS 123
Query: 191 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVV 250
GV A PWNFPL + R P G +++K + P +A A++ +AG P G +
Sbjct: 124 TGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSL 183
Query: 251 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI 310
+ + + D ++ P+++ + TGS G + A +KK ++ELGGN I
Sbjct: 184 INLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKS---TMELGGNDAFI 239
Query: 311 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370
V DDAD V N A+ N GQ C + R++V++ Y++ NLK GD
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 430
P+ ++ A EK+E V++A+ GAKV F+ PT+L+++ + V
Sbjct: 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVF 359
Query: 431 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 490
+EVFGP+A + + + AI +AND++ GL + + +++ R +VS +E G+ +N
Sbjct: 360 DKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGR 419
Query: 491 LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK 533
I++ PFGG+K+SG GRE S G+ F+ V N +
Sbjct: 420 WITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKNNQ 462
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 598 bits (1543), Expect = 0.0
Identities = 184/479 (38%), Positives = 287/479 (59%), Gaps = 9/479 (1%)
Query: 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSK 110
L + I G+W+++ + T ++ NP EVI VS ++ + AI +A AF S WS+
Sbjct: 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQ 90
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV 170
TA R K +R D + H+E L +L TL+ GK L+E+ ++D ++A A +
Sbjct: 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKD 150
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
GE+I + +PD ++K+PVGV ITPWN+PL + K+ PALA GC++V+KPSE TP
Sbjct: 151 GGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITP 210
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
LT + EL + G P G +N+++G ++GD + +V ++FTG GK +M AA
Sbjct: 211 LTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA 270
Query: 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 350
V ++LELGG P I+FDDAD +AV+ AL + ++GQ C +R+LVQ I +
Sbjct: 271 NNVT---NIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKD 327
Query: 351 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 410
KF A VK +K+G+GF GP+I+ K+E++++ A ++GA + +GG+R
Sbjct: 328 KFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDR 387
Query: 411 GMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 466
F+EPTV++N + M + +EEVFGPV + F+TE+EAI +AND+ GLA +F
Sbjct: 388 DDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVF 447
Query: 467 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ ++ + RV+ L+ G V +N+ AP+GG KQSG+GRE K G++E+L K++
Sbjct: 448 SKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHI 506
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 598 bits (1543), Expect = 0.0
Identities = 195/495 (39%), Positives = 284/495 (57%), Gaps = 7/495 (1%)
Query: 36 MSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKET 94
+S + ++ R R Q L+ GK +DA G T++ +P GEV+ +
Sbjct: 4 LSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDV 63
Query: 95 KDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
+ A+++A AF++ W +++ AERS+ + K DL++A +EEL + +LE GKP+ +A GE
Sbjct: 64 RKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQARGE 123
Query: 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
+ + A + A +A+ + G+ DR VL++PVGV G ITPWNFP + + +V
Sbjct: 124 IGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVP 183
Query: 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRK 272
A+ GCTVV+KPSEFT T++ AELA +AGIP GV NVV G G L P V
Sbjct: 184 WAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDM 243
Query: 273 ITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 332
+ FTGS VG KL AA TVK RV LELGG P IVF DADL+ A +G + N+
Sbjct: 244 VAFTGSVRVGTKLGEIAARTVK---RVGLELGGKGPQIVFADADLDAAADGIAYGVYHNA 300
Query: 333 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 392
GQ C+ +R+LVQEGI + + + + GD E G +I++A EKV ++V
Sbjct: 301 GQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVT 360
Query: 393 DAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451
++ GA++LLGG R +Y PTV + V +M ++REE+FGPV L FKT +EA+
Sbjct: 361 AGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAV 420
Query: 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 511
+AN T GL+A +++ NL+ + + G +N + T P GG K+SGLGRE
Sbjct: 421 ALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGREL 480
Query: 512 SKYGMDEFLEIKYVC 526
+YG DE+ + K V
Sbjct: 481 GRYGFDEYSQFKGVH 495
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 590 bits (1523), Expect = 0.0
Identities = 192/483 (39%), Positives = 281/483 (58%), Gaps = 13/483 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SW 108
Q I G W K + V NPAT +I ++ ++ A+++A A W
Sbjct: 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADW 66
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+ + A R++ LR + K EL +L +++ GKPL EA ++D A E+YA+ A+
Sbjct: 67 ATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAE 126
Query: 169 RVYGE-IIPATLPDRRLF--VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
++ P +LP VL++P+GV G ITPWN+P+ M T KV PALA GC ++KP
Sbjct: 127 KLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKP 186
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
SE LT L E+ + G+PPGV+N++ G P+ G L T P V K+ FTGS+A G K+
Sbjct: 187 SELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKI 246
Query: 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 345
M AA VK VSLELGG +P +VF+D DL+ A A+ F +GQ C +R+++
Sbjct: 247 MTAAAQLVK---PVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILH 303
Query: 346 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405
E I +F + K +KN+K+ D EG GP++++ EK+ FV +A S+GA +L GG
Sbjct: 304 ESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGG 363
Query: 406 RRHSLGMT--FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 463
R F EPT++++V + M + REEVFGPV + F TEEEAI +ANDT GL A
Sbjct: 364 SRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGA 423
Query: 464 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523
+ +N+L+R RV++A + G+V VN AP+GGVK+SG GRE ++G+D +L +K
Sbjct: 424 AVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVK 483
Query: 524 YVC 526
V
Sbjct: 484 QVT 486
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 583 bits (1506), Expect = 0.0
Identities = 174/485 (35%), Positives = 266/485 (54%), Gaps = 7/485 (1%)
Query: 44 TDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD 103
T + +GL++ + LI G+ + +G+ V+NPATG+V+ ++ ++ A+ +A
Sbjct: 13 TSLYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADA 71
Query: 104 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEF 162
AF W + T R++ L K D++ + + +L + GKPL A E+ F
Sbjct: 72 AFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRF 131
Query: 163 YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
+A A+ + G L + + P+GV +I PWN+PL M K+ PALA G VV
Sbjct: 132 FAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVV 191
Query: 223 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
+KPSE TPLTAL AELA P GVVN++ G +GD L P+VR ++ TGS A G
Sbjct: 192 LKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250
Query: 283 KKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 342
+ +++ A ++K R +ELGG AP IVFDDAD+ V G + N+GQ C A R+
Sbjct: 251 EHIISHTASSIK---RTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRI 307
Query: 343 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-AKV 401
Q+GIY+ + AV LK G E GPL + A LE+V VE+A + G KV
Sbjct: 308 YAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKV 367
Query: 402 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 461
+ GG + +Y PT+L+ + + ++EVFGPV + F EE+ ++ AND+ GL
Sbjct: 368 ITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGL 427
Query: 462 AAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE 521
A+ ++T ++ R RVS L+YG VN + P GG K SG G++ S YG++++
Sbjct: 428 ASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTV 487
Query: 522 IKYVC 526
+++V
Sbjct: 488 VRHVM 492
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 583 bits (1506), Expect = 0.0
Identities = 185/486 (38%), Positives = 261/486 (53%), Gaps = 14/486 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLE-VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
GG+ I + DG T E V PATG V+ + G +E A+ SA A+ WSK+
Sbjct: 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAG 79
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
ERS+ + + ++ ++ + +L + GK + EA ++D + IE+YA A + G+
Sbjct: 80 IERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQ 139
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233
I + ++P+GV I WN+P + K PALACG VV KPS TP+T
Sbjct: 140 HIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTG 198
Query: 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
+ AE+ +AG+P G+VNVV G + G L P V K++FTGS GKK+M +A TV
Sbjct: 199 VILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257
Query: 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 353
K V+LELGG +P ++F D +L AV GAL A F GQ C RV VQ I +F
Sbjct: 258 K---HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFL 314
Query: 354 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 413
+ K K + VGD G LI+K L+KV FV A +GA+VL GG +
Sbjct: 315 EEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDP 374
Query: 414 ------FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467
F P VL N + +M +EE+FGPV +L F TEEE + AN+T GLA+ +FT
Sbjct: 375 KLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFT 434
Query: 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC- 526
++ R RV+ LE G +N IS PFGG K SG GRE + +D + ++K V
Sbjct: 435 RDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494
Query: 527 -LGDMN 531
+GD++
Sbjct: 495 EMGDVD 500
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 579 bits (1494), Expect = 0.0
Identities = 172/493 (34%), Positives = 262/493 (53%), Gaps = 7/493 (1%)
Query: 36 MSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETK 95
S G+ T+ L ++ TQ LIG ++ + NP TG I +++ +
Sbjct: 7 HSSGVDLGTENLYFQSMMDTQLLIGSRFEAG-TEAEEHILNPRTGAGIIDLAEASHAQID 65
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVD 154
A+ +A AF WS+ T AERS L K D + +E L L GKP+ E+
Sbjct: 66 AAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELP 125
Query: 155 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214
F+A + ++ LP + + P+G+ G+I PWN+PL M+ K+ PA
Sbjct: 126 AIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPA 185
Query: 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 274
+ G TVV KPSE TPLTAL A L +P GVVNV+ G +G+AL+ P+V ++
Sbjct: 186 IGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVS 244
Query: 275 FTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 334
TG A GKK++A AA TVK R LELGG AP IV+ DADL VNG + N+GQ
Sbjct: 245 ITGDIATGKKVLAAAAKTVK---RTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQ 301
Query: 335 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 394
C A R+ + GIYEK + AV ++ GPLI++ ++V +FVE A
Sbjct: 302 DCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERA 361
Query: 395 VSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 453
+ ++ GGR S F++PTV++ E + R EVFGPV + F +++A+
Sbjct: 362 ADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAW 421
Query: 454 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 513
AND++ GLA+ ++T ++ + R + L+YG +N + T P GG+KQSG G++ S
Sbjct: 422 ANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSV 481
Query: 514 YGMDEFLEIKYVC 526
Y ++++ ++++
Sbjct: 482 YALEDYTAVRHIM 494
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 578 bits (1493), Expect = 0.0
Identities = 195/496 (39%), Positives = 272/496 (54%), Gaps = 7/496 (1%)
Query: 36 MSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETK 95
S M V L + T+ I +W + GK V NPAT E + V ++
Sbjct: 2 SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVD 61
Query: 96 DAISSAFDAFNS---WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VG 151
A+ +A AF W + A+ER + L K DL+ + L + + GK A +
Sbjct: 62 KAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLM 121
Query: 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211
++ K + + A A ++ G IP + + +PVGV G I PWNFPL M K+
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 271
GPAL+CG TVVVKP+E TPLTAL L +AG PPGVVN+V G P G A+ + V
Sbjct: 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVD 240
Query: 272 KITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331
K+ FTGST VGK + A + K RVSLELGG +PCIVF DADL+ AV A F +
Sbjct: 241 KVAFTGSTEVGKLIKEAAGKSNLK--RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYH 298
Query: 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391
GQ C+ A+R+ V+E IY++F + K +G+ GV QGP I+K EK+ +
Sbjct: 299 QGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLI 358
Query: 392 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451
E +GAK+ GG F +PTV S+V +M +++EE+FGPV ++ FK+ ++ I
Sbjct: 359 ESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVI 418
Query: 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 511
AN+T GL+A IFTN++ + VS AL+ G V VN + + PFGG K SG GRE
Sbjct: 419 KRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGREL 478
Query: 512 SKYGMDEFLEIKYVCL 527
+YG E+ E+K V +
Sbjct: 479 GEYGFHEYTEVKTVTI 494
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 577 bits (1491), Expect = 0.0
Identities = 174/485 (35%), Positives = 263/485 (54%), Gaps = 13/485 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
+ I G +++ G E PATGE+IA + + AI+SA A W+ ++
Sbjct: 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSP 73
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAK-RVY 171
R + L++ D++ + L L TL+ GKP++E V + GA EF+ A +
Sbjct: 74 MARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALN 133
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+ IP L + + P+GV I WN+P + K PAL G +V KPSE TPL
Sbjct: 134 GDYIP--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
AL AE+ ++AG+P G+ NV+ G+ G L+ P V K++ TGS G+K+ A AAG
Sbjct: 192 GALKIAEILIEAGLPKGLFNVIQGDRD-TGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAG 250
Query: 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
+K V++ELGG +P IVFDDAD+ AV GA+ F +SGQ C RV VQ+ +
Sbjct: 251 HLK---HVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKAR 307
Query: 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411
F + + + + +GD GPL++KA EKV +++E ++GA ++ GG +
Sbjct: 308 FLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNV 367
Query: 412 MT---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468
+ +PTV ++V +M ++REE+FGPV +L F E+E + AN T GLA +FT
Sbjct: 368 AGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTA 427
Query: 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC-- 526
+L R RV + LE G + +N + PFGG KQSG GRE S ++ + E+K V
Sbjct: 428 DLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVS 487
Query: 527 LGDMN 531
G ++
Sbjct: 488 TGKVD 492
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 574 bits (1483), Expect = 0.0
Identities = 168/477 (35%), Positives = 252/477 (52%), Gaps = 15/477 (3%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKE-TKDAISSAFDAFNSWSKLT 112
T+ I G+W+++ +T+EV NPAT EVI V+ G K A+ +A D + + +
Sbjct: 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVA-KGNKADVDKAVEAADDVYLEFRHTS 65
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVY 171
ER L K K+++ Q IT E G PL + G +
Sbjct: 66 VKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYE 125
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
E V+K+ +GV+G ITPWNFP + K+ A A G VV+KPSE TP
Sbjct: 126 FEERRGDD-----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPF 180
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
A+ AE+ + G+P GV N+V G+ +G+ L P+VR ++FTGS G K+M AA
Sbjct: 181 AAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK 240
Query: 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
K +VSLELGG +P IV DD D+ A N+GQ C RVLV I +
Sbjct: 241 DFK---KVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDA 297
Query: 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411
F + ++VG+ +G GP+I+K ++V+ ++ + +GA++ GG G
Sbjct: 298 FLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEG 357
Query: 412 MT---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468
+ F PT+ NV ++M +++EE+FGPV ++ + +EAI +ANDT GLA Y+
Sbjct: 358 LEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGK 417
Query: 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ + +V+ ++E G V +NE + PFGG KQSGLGRE YG++EFLE+K +
Sbjct: 418 DKETLHKVARSIEAGTVEINEAGRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 575 bits (1484), Expect = 0.0
Identities = 180/505 (35%), Positives = 275/505 (54%), Gaps = 16/505 (3%)
Query: 33 SRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGK 92
R + +++ + R I G+++ + G+T +PAT EV+ + GG+
Sbjct: 5 DRVAGISWETIEEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAA-RGGE 63
Query: 93 ETKD-AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151
D A +A +AF WS+ A ER + L + +L+ H +EL + L+ G+ L+
Sbjct: 64 REVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRA 123
Query: 152 EVDYGAKFIEFYAEEA-KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
+V A+ FYAE A + P D + ++ P G G ITPWN PL + T +
Sbjct: 124 QVARAAENFAFYAEYAEHAMEDRTFPVD-RDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 270
+ PALA G TVV+KP+E++P TA AE+ +A +PPGV N+V G + G AL+ P V
Sbjct: 183 IAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLV 242
Query: 271 RKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 330
+T TG T GK +M AA +K R+S ELGG +P +VF DADL A++ + F
Sbjct: 243 PLLTLTGETETGKIVMRNAADHLK---RLSPELGGKSPALVFADADLERALDAVVFQIFS 299
Query: 331 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 390
+G+ C ++R+LV+E I+E F + + ++VG GPLI+ L++V +
Sbjct: 300 FNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGY 359
Query: 391 VEDAVSKGAKVLLGGRRHSLGMT--------FYEPTVLSNVKSEMLVSREEVFGPVAPLL 442
VE +GA++L+GG R + PTV ++ M +++EE+FGPV +
Sbjct: 360 VEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAI 418
Query: 443 CFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGV 502
FK EEEA+ ANDT GLAAY+FT +L+R R++ LE G+V +N + PFGGV
Sbjct: 419 PFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGV 478
Query: 503 KQSGLGREGSKYGMDEFLEIKYVCL 527
K SG REG Y +D + ++K + L
Sbjct: 479 KGSGDRREGGTYALDFYTDLKTIAL 503
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 574 bits (1481), Expect = 0.0
Identities = 186/477 (38%), Positives = 269/477 (56%), Gaps = 7/477 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS---WSKL 111
Q I +W DA KT NP+TGEVI V+ ++ A+ +A AF W ++
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRV 170
A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E TP
Sbjct: 140 HGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
LTAL A L +AG PPGVVN+V G P G A+ + V K+ FTGST +G+ + A
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 350
+ K RV+LELGG +P I+ DAD++ AV A A F N GQ +R VQE IY+
Sbjct: 259 SSNLK--RVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYD 316
Query: 351 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 410
+F + K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 317 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD 376
Query: 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L
Sbjct: 377 RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 436
Query: 471 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
+ +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K V +
Sbjct: 437 DKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 569 bits (1470), Expect = 0.0
Identities = 178/514 (34%), Positives = 275/514 (53%), Gaps = 12/514 (2%)
Query: 24 SMQSYTPAFSRQMSVGMKSVTDRLRDSGLLR--TQGLIGGKWIDAYDGKTLEVHNPATGE 81
S + S + + ++ + L+ Q IGG+++DA KT NP G
Sbjct: 4 SHHHHHTTGEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGS 63
Query: 82 VIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLIT 139
VI VS + A+++A +AF W K+ A +R + L + D++ H+EEL +
Sbjct: 64 VICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEA 123
Query: 140 LEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRL---FVLKQPVGVAG 195
L+ G A V + ++A ++ G IP K+PVGV G
Sbjct: 124 LDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCG 183
Query: 196 AITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255
+ PWN+PL M++ K LA G TVV+KP++ TPLTAL AEL L+AGIP GVVN++ G
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPG 243
Query: 256 NAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDA 315
+ +G L P VRKI FTGST VGK +M A + K +VSLELGG +P I+F D
Sbjct: 244 SGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVK--KVSLELGGKSPLIIFADC 301
Query: 316 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 375
DLN AV +++ F N G+ C+ A R+ V+E I+ +F + V+ +K+G+
Sbjct: 302 DLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNH 361
Query: 376 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 435
GP ++A L K+ + + V +GA ++ GG + F++PTV ++V+ M +++EE F
Sbjct: 362 GPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESF 421
Query: 436 GPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 493
GP+ + F + + AN T GLA+ +FT ++ + VS+ L+ G V +N +
Sbjct: 422 GPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKT 481
Query: 494 TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
APFGG KQSG G++ + ++E+L IK V
Sbjct: 482 DVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 569 bits (1468), Expect = 0.0
Identities = 165/477 (34%), Positives = 259/477 (54%), Gaps = 12/477 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFNSWSKLT 112
+ + I G W D L V +P+T E A +S +G D AI++A AF +W +
Sbjct: 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVIS-LGSTRDADKAINAAKKAFQTWKTTS 83
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVY 171
ER + K ++ ++ + I++E G P+ A + G+ I + + K
Sbjct: 84 PHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFS 143
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
+ + + + +GV G ITPWN+P+ +T KV PAL GCT+V+KPSE PL
Sbjct: 144 FQEALIE-GNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPL 202
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
+A+ AE+ +A +P GV N++ G+ ++G L P + I+FTGST GK + A+
Sbjct: 203 SAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASN 262
Query: 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
T+K RV LELGG I+F DAD++ A+ + F NSGQ+C R+LV++ IY+K
Sbjct: 263 TLK---RVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDK 318
Query: 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 411
+ +VG G G GP+++K +K++ ++ + +GA ++ GG +G
Sbjct: 319 AIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMG 378
Query: 412 MT---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468
M + PTV ++VK M + REE+FGPV LL F TE+EA+ +ANDT GL YI +
Sbjct: 379 MERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQ 438
Query: 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525
+ + R++ + G+V VN + + FGGVK SG REG +G+ EFL+ K +
Sbjct: 439 DRSKCRRIAAQVRSGMVEVNGHELPGG-SYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 562 bits (1452), Expect = 0.0
Identities = 160/480 (33%), Positives = 254/480 (52%), Gaps = 13/480 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFNS--WSK 110
+ IGGKW +EV PATGE + V M D A+++A AF++ W
Sbjct: 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVP-MAAAADVDAAVAAARAAFDNGPWPS 66
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKR 169
ER+ + +L K+ +L+ E G+P + ++A A +
Sbjct: 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
V + + V ++PVGV GAI WN PL + K+ PAL GCT+V+KP+ T
Sbjct: 127 VTWTETRTGSYGQSI-VSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
PLTA A AE+ + G+P GV++VV G + G AL ++P + TFTGS+AVG+++ A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 349
A +K +LELGG + I+ +D DL A+ + + N+GQ CV R+L Y
Sbjct: 245 AEMLK---PCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301
Query: 350 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 409
++ A + V L VG GPLI++ +VE ++ + +GA+++ GG R
Sbjct: 302 DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPE 361
Query: 410 LGMT--FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467
F +PTV ++V ++M +++EE+FGPV ++ + TEE+AI +AND+ GLA ++T
Sbjct: 362 GLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWT 421
Query: 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527
++ + ++S+ + G G+N +PFGG K SG+GRE G++ F + K V L
Sbjct: 422 TDVPKGIKISQQIRTGTYGINWYAFDPG-SPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 556 bits (1436), Expect = 0.0
Identities = 146/513 (28%), Positives = 238/513 (46%), Gaps = 14/513 (2%)
Query: 20 SHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA- 78
H P +T +R+ + + +I G+ + ++ NPA
Sbjct: 7 KHEP-FTDFTVEANRK---AFEEALGLVEKELGKEYPLIINGERVTT--EDKIQSWNPAR 60
Query: 79 TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLI 138
+++ +VS + AI SA +AF +W + ER+ L K ++ K E +
Sbjct: 61 KDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWL 120
Query: 139 TLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAIT 198
E GKP KEA + F+E+YA + + + P + P+GV I+
Sbjct: 121 VHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTIS 180
Query: 199 PWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP 258
PWNF LA++ + G TVV+KP+ TP+ A E+ AG+P GV+N V G+
Sbjct: 181 PWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGA 240
Query: 259 DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVC---RVSLELGGNAPCIVFDDA 315
++GD L+ P+ ITFTGS VG +L AA RV +E+GG +V DA
Sbjct: 241 EVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDA 300
Query: 316 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 375
DL++A L + F SGQ C +R ++ + +Y++ + KNL VGD
Sbjct: 301 DLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYM 360
Query: 376 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 435
GP+I++ A EK+ +++E +G +++ GG S F +PT+++++ E ++ +EE+F
Sbjct: 361 GPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIF 419
Query: 436 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 495
GPV + A+ +AN+T GL + T N + G + N
Sbjct: 420 GPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAI 479
Query: 496 VA--PFGGVKQSGLG-REGSKYGMDEFLEIKYV 525
V PFGG K SG + G + ++ K V
Sbjct: 480 VGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTV 512
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 532 bits (1372), Expect = 0.0
Identities = 105/515 (20%), Positives = 185/515 (35%), Gaps = 47/515 (9%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
+ + G+WI G + + +P TG + VS G + + D + LT
Sbjct: 7 LLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTY 65
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
A+R+ L LL A + + + T G ++ ++D G + +YA+ +
Sbjct: 66 AQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEV 125
Query: 174 IIPATLPDRRL---------FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 224
L VL GVA I +NFP + K PAL G V+VK
Sbjct: 126 HALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVK 185
Query: 225 PSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283
P+ T + AGI PPG ++++ G++ L ++FTGS
Sbjct: 186 PATATAWLTQRMVADVVDAGILPPGALSIICGSS---AGLLDQIRSFDVVSFTGSADTAA 242
Query: 284 KLMAGAAGTVKKVCRVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVC 338
L A A + R++++ I+ DA ++ + + SGQ C
Sbjct: 243 TLRAHPAFVQRGA-RLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTA 301
Query: 339 ANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG 398
R V E E +A + + VG+ + V G L+++ E V + +
Sbjct: 302 IRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEA 361
Query: 399 AKVLLGGRRHSLGMT-----FYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKT----- 446
+ P + ++ + L+ EVFGPVA + ++
Sbjct: 362 VLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTN 421
Query: 447 ---EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-----------EGLI 492
E A+ +A L A I++N+ R++ L V+
Sbjct: 422 ALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGN 481
Query: 493 STEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 526
++ GG ++G G E G + + +
Sbjct: 482 VMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQ 516
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 530 bits (1369), Expect = 0.0
Identities = 151/505 (29%), Positives = 236/505 (46%), Gaps = 16/505 (3%)
Query: 30 PAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSC 88
R M ++ V + L IGG+W+D + + NP+ EV+ +
Sbjct: 17 EEARRAMREALRRVREEFGRHYPL----YIGGEWVDT--KERMVSLNPSAPSEVVGTTAK 70
Query: 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 148
G E + A+ +A+ AF +W +RS+ L K L+ K EL + E GK E
Sbjct: 71 AGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE 130
Query: 149 AVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMI 207
A +V FIE+YA A R + P P+G I PWNFP+A+
Sbjct: 131 ASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIF 190
Query: 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS 267
T + +A G TV+ KP+E + E+ +AG PPGVVN + G ++G L+
Sbjct: 191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEH 250
Query: 268 PQVRKITFTGSTAVGKKLMAGAAGTVKKVC---RVSLELGGNAPCIVFDDADLNVAVNGA 324
P++R I FTGS VG K+ A R +E GG IV + AD ++A G
Sbjct: 251 PRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGV 310
Query: 325 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 384
+ + + GQ C A+R+++ +G YE + K + L VG E GP+++
Sbjct: 311 VVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGP-AEENPDLGPVVSAEQE 369
Query: 385 EKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444
KV +++E ++G +++LGG+R F PTV + V + +++EE+FGPV ++
Sbjct: 370 RKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428
Query: 445 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGV 502
K EA+ +ANDT GL +++ + G + N + V PFGG
Sbjct: 429 KDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGF 488
Query: 503 KQSGLGRE-GSKYGMDEFLEIKYVC 526
K SG + G+ + FLE+K V
Sbjct: 489 KLSGTNAKTGALDYLRLFLEMKAVA 513
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 482 bits (1243), Expect = e-167
Identities = 120/518 (23%), Positives = 191/518 (36%), Gaps = 44/518 (8%)
Query: 33 SRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYD-GKTLEVHNPATGEVIANVSCMGG 91
S + +G +++ + + + L+ G+W+D + H PA + V
Sbjct: 8 SSGVDLGTENLYFQSMMIFTPKGKHLVAGEWLDGAGTFASAPAHGPAHDFAVGTVE---- 63
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151
A +A +AF ++ + ER+ LR D + A E + ++ + E G P G
Sbjct: 64 -LVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNG 122
Query: 152 EVDYGAKFIEFYAEEAK------RVYGEIIPATLPDRR--LFVLKQPVGVAGAITPWNFP 203
E + +A+ + R +P P R + ++++PVG NFP
Sbjct: 123 ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFP 182
Query: 204 LAMIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNA 257
LA T ALA GC VVVK P T AE A G+ PGV +++ G +
Sbjct: 183 LAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGS 242
Query: 258 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADL 317
D+G AL+ P ++ + FTGS A G+ L A + + ELG P + +A
Sbjct: 243 RDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPI-PFFGELGSVNPMFLLPEALK 301
Query: 318 NVA---VNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGV 373
A G + +GQ C +V EG ++F A +A+ + +G+
Sbjct: 302 ARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGI 361
Query: 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 433
+ +A A K LL + EE
Sbjct: 362 AKAYRDGQARF---------ATRNAVKPLLATESSGRDASPNLFETTGAQFLADHALGEE 412
Query: 434 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT--NNLQRTWRVSEALEY--GLVGVNE 489
VFGP+ ++ + E +A L A I +L+ R+ LE G V VN
Sbjct: 413 VFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNG 472
Query: 490 GLISTEV----APFGGVKQSGLGREGS--KYGMDEFLE 521
EV G S S + FL
Sbjct: 473 FPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLR 510
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 453 bits (1168), Expect = e-149
Identities = 139/494 (28%), Positives = 212/494 (42%), Gaps = 10/494 (2%)
Query: 40 MKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAI 98
++R I GK + + NP EV+ + G E DAI
Sbjct: 517 FPKHIAQVRTQLGKTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAI 574
Query: 99 SSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAK 158
++A AF +W R++ L K EL LE GK +A +V
Sbjct: 575 AAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAID 634
Query: 159 FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 218
F+E+YA E R+ P +P GVA I PWNFPLA+ A+ G
Sbjct: 635 FLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTG 694
Query: 219 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 278
VV KPS T + EL +AG+P GV N G +GD L+ P + I FTGS
Sbjct: 695 NCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGS 754
Query: 279 TAVGKKLMAGAAGTVKKVC---RVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT 335
G +++ AA ++ E+GG I+ DDADL+ AV L + F GQ
Sbjct: 755 METGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQK 814
Query: 336 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 395
C +RV+V + +Y+KF + K KVG G + + A++ ++ + E
Sbjct: 815 CSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGK 874
Query: 396 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 455
+G + G F T++ +K E +++EE+FGPV ++ K ++AI AN
Sbjct: 875 REGHVLYESPVPAGEG-YFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWAN 933
Query: 456 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG-REGS 512
T L IF+ + + + G + +N V PFGG + SG+G + G
Sbjct: 934 STQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGG 993
Query: 513 KYGMDEFLEIKYVC 526
+ F++ + V
Sbjct: 994 PDYLLHFMDPRVVT 1007
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 419 bits (1079), Expect = e-142
Identities = 93/488 (19%), Positives = 160/488 (32%), Gaps = 39/488 (7%)
Query: 64 IDAYDGKTLEVHNPATGEVIAN-VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 122
++ N TGE + E A ++A + +L ++R+ LR
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRT 60
Query: 123 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE--------I 174
L A +++ LE P GE+ A + +A+
Sbjct: 61 IASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNP 120
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR--KVGPALACGCTVVVKPSEFTPLT 232
A LP + + +G NFPLA ALA GC V+VK P T
Sbjct: 121 TRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGT 180
Query: 233 ALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288
+ AE QA +P + ++ GN +G AL++ P+++ + FTGS G+ L
Sbjct: 181 SQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240
Query: 289 AAGTVKKVCRVSLELGGNAPCIVFDDADLNVA--VNGALAAKFRNSGQTCVCANRVLVQE 346
A + + ELG P +F A A + +A+ GQ C V
Sbjct: 241 AHERPEPI-PFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALN 299
Query: 347 GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG- 405
AF + + + + P I + +V G V
Sbjct: 300 TP---ETQAFIETAQ--SLIRQQSPSTLLTPGIRDSYQSQVV---SRGSDDGIDVTFSQA 351
Query: 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465
+ + S + EE+FGP + ++ + + + ++ L A I
Sbjct: 352 ESPCVASALF--VTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATI 409
Query: 466 FT--NNLQRTWRVSEALEY--GLVGVNE---GLISTEVAPFGGVKQS---GLGREGSKYG 515
+ + ++ LE G + N G+ GG +
Sbjct: 410 HATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEA 469
Query: 516 MDEFLEIK 523
+ +L
Sbjct: 470 IHRWLRPV 477
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 364 bits (937), Expect = e-121
Identities = 155/468 (33%), Positives = 252/468 (53%), Gaps = 11/468 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
+ + I G+W+++ + +V NPAT EV+ V ++ A +A +AF +WSK+
Sbjct: 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAV 64
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
R++ L + LL HKEEL LIT+E GK KEA+GEV G + +EF A + G+
Sbjct: 65 PRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGD 124
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLT 232
+ + D + P+GV G I P+NFP M+ A+A G T ++KPSE TPL
Sbjct: 125 SLASIATDVEAANYRYPIGVVGGIAPFNFP-MMVPCWMFPMAIALGNTFILKPSERTPLL 183
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
EL +AG+P GV NVV G A D+ + +L P+++ I+F GS VG+ + +
Sbjct: 184 TEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSEN 242
Query: 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 352
+K RV G IV +DA+L V + A F ++G+ C+ V V+EGI ++F
Sbjct: 243 LK---RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEF 299
Query: 353 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 412
+ V ++K+G+G +GV GP+I + ++ +++E + +GA+++ GR +
Sbjct: 300 MAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDD 359
Query: 413 TFYE-PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471
++ PT+ NV +EM + ++E+F PV ++ K +EAI +AN + A +FT+N
Sbjct: 360 GYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSN 419
Query: 472 RTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 517
E ++ G++G+N G + +A PF G K S G G D
Sbjct: 420 AIRYFRENIDAGMLGINLG-VPAPMAFFPFSGWKSSFFG-TLHANGKD 465
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 358 bits (922), Expect = e-118
Identities = 138/473 (29%), Positives = 228/473 (48%), Gaps = 17/473 (3%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
I GK + G+ + NPATGEV V+ + A+ SA A W+
Sbjct: 26 ELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNP 85
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
R++ K+ LL + EL ++++ E GK + +A G++ G + EF E
Sbjct: 86 QRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSE 145
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLT 232
P ++ ++QPVG+ ITP+NFP MI PA+ACG ++KPSE P
Sbjct: 146 FTEGAGPGIDMYSIRQPVGIGAGITPFNFP-GMIPMWMFAPAIACGNAFILKPSERDPSV 204
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
+ AEL ++AG+P G++NVV G DA+LT P + ++F GST + + + AA
Sbjct: 205 PIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMN 263
Query: 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV-CANRVLVQEGIYEK 351
K R G I+ DADL+ A N + A + ++G+ C+ + V V E +
Sbjct: 264 GK---RAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANR 320
Query: 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL- 410
D V++L++G E GP++ K A +++ + ++ + +GAK+++ GR L
Sbjct: 321 LIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQ 380
Query: 411 ----GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 466
G F + +V +M + + E+FGPV ++ + EEA+ + G I+
Sbjct: 381 GYENG-HFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIY 439
Query: 467 TNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 517
T + + + G+VGVN I +A FGG K S G + +++G D
Sbjct: 440 TRDGDAARDFASRINIGMVGVNVP-IPVPLAYHSFGGWKSSSFG-DLNQHGTD 490
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 342 bits (880), Expect = e-113
Identities = 71/427 (16%), Positives = 145/427 (33%), Gaps = 46/427 (10%)
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151
+E ++ I SA A + ++ + ++ D +E+L ++ E G + +
Sbjct: 12 QEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKV 71
Query: 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211
+ A + K + + ++++ + P+GV + P P + + K
Sbjct: 72 IKNVFA--SKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKT 129
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTS 267
++ G ++V P L + A +AG P G ++ + D L+
Sbjct: 130 LISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKH 189
Query: 268 PQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAA 327
I TG +A+ K + GN P + A++ AV L +
Sbjct: 190 KDTAVILATGGSAMVKAAYSSGT-------PAIGVGPGNGPAFIERSANIPRAVKHILDS 242
Query: 328 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL-------KVGDG-FGEGVVQGPLI 379
K ++G C V+V+ E F K + ++G P I
Sbjct: 243 KTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAI 302
Query: 380 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVA 439
+++ + V A+VL+ + V +++ SRE+ P+
Sbjct: 303 VGKSVQHIANLAGLTVPADARVLIAE--------------ETKVGAKIPYSREK-LAPIL 347
Query: 440 PLLCFKTEEEAIHMANDTNA----GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 495
+T +EA ++ D G I + + + + + VN
Sbjct: 348 AFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTP----- 402
Query: 496 VAPFGGV 502
GG+
Sbjct: 403 -GALGGI 408
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 354 bits (911), Expect = e-112
Identities = 119/441 (26%), Positives = 197/441 (44%), Gaps = 12/441 (2%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
+ A+++A F WS+ A R+ L + LL + L+ E GK L +A+ E
Sbjct: 551 QAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSE 610
Query: 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRKV 211
+ A F +YA + ++++G P L + GV AI+PWNFPLA+ +V
Sbjct: 611 LREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQV 670
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 271
AL G +VV KP+E TP A A L +AGIP + +V G+ IG AL P +
Sbjct: 671 TAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIA 729
Query: 272 KITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331
+ FTGST V + + A + + E GG I A + + + FR+
Sbjct: 730 GVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRS 789
Query: 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391
+GQ C + VQE + ++ + + A + LK+GD GP+I+ A ++++ +
Sbjct: 790 AGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI 849
Query: 392 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EE 449
++ G F P + ++ L EEVFGP+ ++ ++ E E
Sbjct: 850 ARMKTEARLHFAGPAPEG---CFVAPHIFELTEAGQL--TEEVFGPILHVVRYRPENLER 904
Query: 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGL 507
+ T GL + + + + ++ G + VN +I V PFGG SG
Sbjct: 905 VLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGT 964
Query: 508 G-REGSKYGMDEFLEIKYVCL 527
G + G + + F + V +
Sbjct: 965 GPKAGGPHYLARFATEQTVTI 985
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 315 bits (810), Expect = e-103
Identities = 74/421 (17%), Positives = 149/421 (35%), Gaps = 33/421 (7%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
E I+ A ++ + + K R + L Q E G + E
Sbjct: 8 ELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVI 67
Query: 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
++ A + + ++ G + + + +PVG+ I P P + K
Sbjct: 68 KNHFASEFIYNKYKDEQTCGIL--EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSL 125
Query: 213 PALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSP 268
+L ++ P + AA+L A+ AG P ++ + + ++ +AL+
Sbjct: 126 ISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHD 185
Query: 269 QVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAK 328
+ I TG + K A + K GN P ++ + AD+ AV L +K
Sbjct: 186 DIALILATGGPGMVKA----AYSSGK---PAIGVGAGNVPVVIDETADIKRAVASVLMSK 238
Query: 329 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 388
++G C V+V + +Y++ + F+ ++ + V + LI+ A K+
Sbjct: 239 TFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDA-DKVRKVLLIDGALNAKIV 297
Query: 389 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448
A+++ A V + L V + + E+ P + E
Sbjct: 298 GQPATAIAEMAGVKVPADTK-----VLIGEGLGKVSYDDAFAHEK-LSPTLGMFRADNFE 351
Query: 449 EAIHMA----NDTNAGLAAYIFTN---NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGG 501
+A+ A G + ++TN N R + ++ + +N GG
Sbjct: 352 DAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIP------TTHGG 405
Query: 502 V 502
+
Sbjct: 406 I 406
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 283 bits (727), Expect = 4e-89
Identities = 110/467 (23%), Positives = 196/467 (41%), Gaps = 20/467 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
++G + + + +P +A AI +A A W A+R
Sbjct: 67 VVGDEEV--WTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADR 124
Query: 117 SKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEI 174
++ K D+L + E+ + QGK + +A + F F A+ A + GE
Sbjct: 125 AQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQ 184
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234
+ P V + G AI+P+NF A+ G G V+ KPS+ L +
Sbjct: 185 PISVPPSTNHTVYRGLEGFVAAISPFNFT-AIGGNLAGAPALMGNVVLWKPSDTAMLASY 243
Query: 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV- 293
A + +AG+PP ++ V + P GD + +S + I FTGS K L A +
Sbjct: 244 AVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLD 303
Query: 294 --KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
+ R++ E GG V AD++ V+G L + F GQ C +R+ V + ++ +
Sbjct: 304 RFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQ 363
Query: 352 FADAFSKAVKNLKVGDGFGE-GVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHS 409
+ +KVGD + G +I+ A +++ ++E A S +L GG+ +
Sbjct: 364 IKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNE 423
Query: 410 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNA-GLAAYIF 466
+ EP ++ + + + +EE+FGPV + + + E + + + T + GL +F
Sbjct: 424 SVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVF 483
Query: 467 TNNLQRTWRVSEALEYGLVG---VNEGLISTEVA--PFGGVKQSGLG 508
+ + L G +N+ + V PFGG + SG
Sbjct: 484 AQDKAIVQEATRMLRNA-AGNFYINDKSTGSVVGQQPFGGARASGTN 529
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 275 bits (706), Expect = 4e-87
Identities = 129/441 (29%), Positives = 202/441 (45%), Gaps = 35/441 (7%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VG 151
+ +A+ A AF+S R + L L+ ++EL + + K A
Sbjct: 19 KISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYE 78
Query: 152 EVDYGAKFIEFYAEE----AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 207
EV Y + IE+ ++ A E P T D L++ +P+GV I WN+P +
Sbjct: 79 EVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDE-LYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 208 TRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 264
+ P A+A G VV+KPSE + A A + + + + V+ G L
Sbjct: 138 ---IQPMVGAIAAGNAVVLKPSELSENMASLLATI-IPQYLDKDLYPVING-GVPETTEL 192
Query: 265 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGA 324
L I +TGST VGK +M AA K + V+LELGG +PC V + DL+VA
Sbjct: 193 LKERFD-HILYTGSTGVGKIIMTAAA---KHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248
Query: 325 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP----LIN 380
KF NSGQTCV + +L I + + K++K +GE + +I+
Sbjct: 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-----YGEDAKKSRDYGRIIS 303
Query: 381 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAP 440
++V +E KV GG + + PT+L++V + V +EE+FGPV P
Sbjct: 304 ARHFQRVMGLIEG-----QKVAYGGTGDAATR-YIAPTILTDVDPQSPVMQEEIFGPVLP 357
Query: 441 LLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAP 498
++C ++ EEAI N LA Y+F++N + ++ G V N+ ++ + P
Sbjct: 358 IVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLP 417
Query: 499 FGGVKQSGLGREGSKYGMDEF 519
FGGV SG+G K + F
Sbjct: 418 FGGVGNSGMGSYHGKKSFETF 438
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 251 bits (644), Expect = 4e-78
Identities = 116/444 (26%), Positives = 192/444 (43%), Gaps = 40/444 (9%)
Query: 94 TKDAISSAFD----AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA 149
+ I S F F + + R + L + + ++ +KE L + + GKP
Sbjct: 26 SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85
Query: 150 --------VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWN 201
+ E+D+ ++ + V P +V+++P GV I P+N
Sbjct: 86 DLAEIGAVLHEIDFALAHLDEWVA-PVSVPSPD--IIAPSE-CYVVQEPYGVTYIIGPFN 141
Query: 202 FPLAMITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP 258
+P+ + + P A+ G T ++KPSE TP T+ ++ + P V V+ G
Sbjct: 142 YPVNLT---LTPLIGAIIGGNTCIIKPSETTPETSAVIEKI-IAEAFAPEYVAVIQG-GR 196
Query: 259 DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLN 318
D LL+ P I FTGS VGK +M AA K + V LELGG P IV DADL+
Sbjct: 197 DENSHLLSLP-FDFIFFTGSPNVGKVVMQAAA---KHLTPVVLELGGKCPLIVLPDADLD 252
Query: 319 VAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 378
VN + KF NSGQT + + + V + + + + VK E G L
Sbjct: 253 QTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTE-----LPEINSTGKL 307
Query: 379 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPV 438
+ + ++++ + +E +VL+G + TV+ V+ + EE+FGP+
Sbjct: 308 VTERQVQRLVSLLEAT---QGQVLVGSQADVSKR-ALSATVVDGVEWNDPLMSEELFGPI 363
Query: 439 APLLCFKTEEEAIHMANDTNAG-LAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTE 495
P+L F + AI N + LA Y+F ++ + ++ G VN + +
Sbjct: 364 LPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSP 423
Query: 496 VAPFGGVKQSGLGREGSKYGMDEF 519
PFGG+ SG+G + F
Sbjct: 424 YLPFGGIGASGMGEYHGHFSYLTF 447
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 62/460 (13%), Positives = 121/460 (26%), Gaps = 158/460 (34%)
Query: 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSK------LTAAERSKGLRK 122
L V A + N C K+ +D S SK + + + G +
Sbjct: 19 KDILSVFEDA---FVDNFDC---KDVQDMPKSIL------SKEEIDHIIMSKDAVSGTLR 66
Query: 123 WYDLLMAHKEELGQLITLEQGKPLKEAVGEV---DYGAKFI---------------EFYA 164
+ L++ +EE+ +++ V EV +Y F+ Y
Sbjct: 67 LFWTLLSKQEEM-----------VQKFVEEVLRINYK--FLMSPIKTEQRQPSMMTRMYI 113
Query: 165 EEAKRVYGE---IIPATLPDRRLF-VLK------QP---VGVAGAITPWNFPLAMITRKV 211
E+ R+Y + + + + L+ +P V + G ++
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG----------VL---- 159
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 271
G G T + +Q + + + + N + + +L Q
Sbjct: 160 G----SGKTW---------VALDVCLSYKVQCKMDFKIFWLNLKNC-NSPETVLEMLQKL 205
Query: 272 KITFTGSTAVGKKLMAGA---AGTVKKVCRVSLELGGNAPC-IVFDDADLNVAV-NGALA 326
+ + +++ R L+ C +V + V N
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN------VQNAKAW 259
Query: 327 AKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 386
F S C ++L+ + +V D ++
Sbjct: 260 NAFNLS---C----KILL--------------TTRFKQVTDFLSAATTTHISLD----HH 294
Query: 387 VETFVEDAVSKG--AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC- 443
T D K K L + + + L EV P
Sbjct: 295 SMTLTPDE-VKSLLLKYL-------------------DCRPQDL--PREVLT-TNPRRLS 331
Query: 444 -FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS-EALE 481
E+I T ++ + L S LE
Sbjct: 332 IIA---ESIRDGLATWDNW-KHVNCDKLTTIIESSLNVLE 367
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 533 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.63 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.34 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-114 Score=920.17 Aligned_cols=472 Identities=38% Similarity=0.630 Sum_probs=451.9
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
+.+.||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35679999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||+.+++. |+..+++.++||+++++++.+...|.. ++...+++++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a 164 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc-CCcceeEEecceeEEEEeccccCcchhhhhhHH
Confidence 999999999999999986 699999999999999988877665543 466788999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHH-Hhhc
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA-GAAG 291 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~-~~~~ 291 (533)
+||++||+||+|||+.||+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.+++ .+++
T Consensus 165 ~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~ 244 (490)
T 2wme_A 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS 244 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999988899999999999999999999999988876 4566
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 245 ~lk~---v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 245 SLKE---VTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HCCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred CCce---EEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 7888 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 447 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~ 447 (533)
++++||+++..+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 99999999999999999999999999999999998754 24799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 448 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
||||+++|+++|||++||||+|.++++++++++++|+||||++....+.+||||+|+||+||++|++|+++||+.|+|++
T Consensus 402 deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEE
Confidence 99999999999999999999999999999999999999999987777889999999999999999999999999999998
Q ss_pred ec
Q 009516 528 GD 529 (533)
Q Consensus 528 ~~ 529 (533)
+.
T Consensus 482 ~~ 483 (490)
T 2wme_A 482 EL 483 (490)
T ss_dssp EC
T ss_pred EC
Confidence 74
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-111 Score=900.34 Aligned_cols=474 Identities=57% Similarity=0.993 Sum_probs=456.3
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 10 LLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp GSCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34567899999998777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
++|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...+++++|+|||++|+|||||+.+.++++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 169 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKV 169 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHH
Confidence 99999999999999999999999999999999999988777665554456788999999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 170 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~ 249 (484)
T 3ifg_A 170 GPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP 249 (484)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGG
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 250 ~~k~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 326 (484)
T 3ifg_A 250 TVKK---LTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTES 326 (484)
T ss_dssp GTCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred cCCc---eEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 327 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 406 (484)
T 3ifg_A 327 GATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELV 406 (484)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999999998754468999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+||++|++|+++||+.|+|+++
T Consensus 407 ~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 407 RLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999877778999999999999999999999999999999875
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-110 Score=893.01 Aligned_cols=471 Identities=59% Similarity=0.992 Sum_probs=454.8
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 110 (504)
T 3ek1_A 31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANAD 110 (504)
T ss_dssp CCSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999988778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
+|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 111 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 190 (504)
T 3ek1_A 111 DIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAA 190 (504)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999887776655555567889999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 191 ~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 270 (504)
T 3ek1_A 191 PALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT 270 (504)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 271 lk~---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 271 IKR---ISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp TCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred cCC---eEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||+++..+++++.+++++++++|+++++||... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL--GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA 425 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999763 479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 426 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 426 QANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999887778999999999999999999999999999999875
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-109 Score=889.52 Aligned_cols=474 Identities=39% Similarity=0.667 Sum_probs=455.4
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhh--HHhccCCHHHHHHHHHHHHHHHHHh
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAH 130 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (533)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|++++++|+++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 110 (520)
T 3ed6_A 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEH 110 (520)
T ss_dssp SCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHh
Confidence 34678999999988778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
+++|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...+++++|+|||++|+|||||+.+.+++
T Consensus 111 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 190 (520)
T 3ed6_A 111 REALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190 (520)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999998877665554434677899999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 191 ~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa 270 (520)
T 3ed6_A 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA 270 (520)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987899999999999999999999999999999999
Q ss_pred cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 291 ~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
+++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 271 ~~l~~---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 271 NNVTN---IALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp TTTCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hcCCC---EEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
+++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 3589999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877789999999999999999999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 508 ~~~ 510 (520)
T 3ed6_A 508 TNT 510 (520)
T ss_dssp EES
T ss_pred EcC
Confidence 863
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-109 Score=886.00 Aligned_cols=472 Identities=44% Similarity=0.749 Sum_probs=454.4
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (506)
T 3rh9_A 11 NLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREE 90 (506)
T ss_dssp CCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEe-eeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||+.+++.|+..+++.++||++.+++..+...+.. ++...++++ +|+|||++|+|||||+.+.+++++
T Consensus 91 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 169 (506)
T 3rh9_A 91 IGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLS 169 (506)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999988877655543 456788899 999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 170 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 249 (506)
T 3rh9_A 170 AALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQ 249 (506)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTT
T ss_pred HHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 250 l~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 326 (506)
T 3rh9_A 250 VKK---LALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDG 326 (506)
T ss_dssp TCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTT
T ss_pred CCc---eEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccC
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC-CCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
+++||+++..+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 327 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 406 (506)
T 3rh9_A 327 IDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVI 406 (506)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999999986433 68999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++.
T Consensus 407 ~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 407 DAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999999999999999999999999999999999999998887889999999999999999999999999999998763
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-108 Score=884.69 Aligned_cols=471 Identities=35% Similarity=0.605 Sum_probs=452.6
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEAD 102 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 34578999999987666 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHH-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.++ +.|+..+++.++||+++++++.+...+...++...+++++|+|||++|+|||||+.+.++++
T Consensus 103 ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 182 (498)
T 4f3x_A 103 EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKL 182 (498)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHH
Confidence 99999999999999999 89999999999999999988766655433456778999999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 183 a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~ 261 (498)
T 4f3x_A 183 APAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAK 261 (498)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999888899999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+
T Consensus 262 ~~k~---v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 262 TVKR---THLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp TTCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred hCCc---eeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCC-eEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
++++||++++.+++++.+++++++++|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 418 (498)
T 4f3x_A 339 ENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDA 418 (498)
T ss_dssp GCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCH
T ss_pred cCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHH
Confidence 9999999999999999999999999999 999999865446899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 419 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 419 VAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999887778999999999999999999999999999999875
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-108 Score=877.11 Aligned_cols=473 Identities=57% Similarity=1.023 Sum_probs=455.6
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999987889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||..+++.|+..+++.++||+..+.+..+...+...++...+++++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999988776665555455678899999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++
T Consensus 249 ~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T 3jz4_A 249 KK---VSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGV 325 (481)
T ss_dssp CE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTC
T ss_pred Cc---eEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 453 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~ 453 (533)
++||++++.+++++.+++++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 326 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 405 (481)
T 3jz4_A 326 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQ 405 (481)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999874345799999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 454 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 454 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|++++
T Consensus 406 aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~~ 481 (481)
T 3jz4_A 406 ANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481 (481)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEeC
Confidence 9999999999999999999999999999999999998877889999999999999999999999999999998763
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-108 Score=883.03 Aligned_cols=471 Identities=38% Similarity=0.635 Sum_probs=449.7
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999999865678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCC---CCCceeEEEeeeceEEEEEcCCCcchHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 208 (533)
+|++++++|+|||+.+++ .|+..+++.++||++++++..+...+.. .++...++.++|+|||++|+|||||+.+.+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 8999999999999999988776654432 223367899999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hh-cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCC
Q 009516 289 AA-GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367 (533)
Q Consensus 289 ~~-~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 367 (533)
++ +++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||
T Consensus 277 aa~~~lk~---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGd 353 (517)
T 2o2p_A 277 CALSNVKK---VSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGN 353 (517)
T ss_dssp HHHHTCCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSC
T ss_pred hHHhcCCe---EEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 99 89999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCC-
Q 009516 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT- 446 (533)
Q Consensus 368 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~- 446 (533)
|+|+++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 354 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 433 (517)
T 2o2p_A 354 PLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433 (517)
T ss_dssp TTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence 9999999999999999999999999999999999999976533579999999999999999999999999999999999
Q ss_pred -HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 447 -EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 447 -~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+||++|++++++||+.|+|
T Consensus 434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v 513 (517)
T 2o2p_A 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513 (517)
T ss_dssp CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEE
Confidence 9999999999999999999999999999999999999999999877778999999999999999999999999999999
Q ss_pred EEe
Q 009516 526 CLG 528 (533)
Q Consensus 526 ~~~ 528 (533)
+++
T Consensus 514 ~~~ 516 (517)
T 2o2p_A 514 TFE 516 (517)
T ss_dssp EEE
T ss_pred Eee
Confidence 875
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-108 Score=880.65 Aligned_cols=473 Identities=37% Similarity=0.646 Sum_probs=452.8
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 91 (497)
T 3k2w_A 12 NKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHI 91 (497)
T ss_dssp TTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||++.+++..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 171 (497)
T 3k2w_A 92 LAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGP 171 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999988877665544345678899999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l 251 (497)
T 3k2w_A 172 ALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYM 251 (497)
T ss_dssp HHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++
T Consensus 252 ~p---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 328 (497)
T 3k2w_A 252 TP---VMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADS 328 (497)
T ss_dssp CC---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred CC---eEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcc--cC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++||+++..+++++.+++++++++|+++++||.. .+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 329 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 408 (497)
T 3k2w_A 329 QMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQ 408 (497)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHH
T ss_pred ccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999973 22 2589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++.
T Consensus 409 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 409 AIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 99999999999999999999999999999999999999998887889999999999999999999999999999998864
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-107 Score=881.17 Aligned_cols=471 Identities=41% Similarity=0.663 Sum_probs=454.2
Q ss_pred ccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhh--HHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
.++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| +.|+.++..+|.++|+++++.|++++
T Consensus 23 ~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (528)
T 3u4j_A 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQ 102 (528)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999987789999999999 99999999999999999999999999 78999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
++|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 103 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 182 (528)
T 3u4j_A 103 EELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERV 182 (528)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999988776655544346778999999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 183 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 262 (528)
T 3u4j_A 183 PWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAAR 262 (528)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++
T Consensus 263 ~lk~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 339 (528)
T 3u4j_A 263 TVKR---VGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNE 339 (528)
T ss_dssp TTCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred cCCc---eEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC-CCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
++++||+++..+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 419 (528)
T 3u4j_A 340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419 (528)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHH
Confidence 999999999999999999999999999999999987542 6899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 420 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 497 (528)
T 3u4j_A 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVT 497 (528)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEE
T ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999887788999999999999999999999999999999876
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-107 Score=875.57 Aligned_cols=472 Identities=40% Similarity=0.668 Sum_probs=452.4
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-----HhccCCHHHHHHHHHHHHHHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SWSKLTAAERSKGLRKWYDLLM 128 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~ 128 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~ 86 (503)
T 3iwj_A 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVT 86 (503)
T ss_dssp CCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHH
T ss_pred CCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 35689999999887889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCccc-C--CCCCCceeEEEeeeceEEEEEcCCCcchH
Q 009516 129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-P--ATLPDRRLFVLKQPVGVAGAITPWNFPLA 205 (533)
Q Consensus 129 ~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 205 (533)
+++++|++++++|+|||+.+++.|+..+++.++||+++++++.+... + ....+...+++++|+|||++|+|||||+.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T 3iwj_A 87 EKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPML 166 (503)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHH
Confidence 99999999999999999999999999999999999999988765531 1 12235678899999999999999999999
Q ss_pred HHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHH
Q 009516 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285 (533)
Q Consensus 206 ~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 285 (533)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|
T Consensus 167 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i 246 (503)
T 3iwj_A 167 MATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKI 246 (503)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc
Q 009516 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 365 (533)
Q Consensus 286 ~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 365 (533)
++.+++++|| +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 247 ~~~aa~~l~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (503)
T 3iwj_A 247 MTAAAQLVKP---VSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKI 323 (503)
T ss_dssp HHHHGGGTCC---EEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHhcCCCC---EEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccC
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEe
Q 009516 366 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 443 (533)
Q Consensus 366 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~ 443 (533)
|+|+++++++||++++.+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 99999999999999999999999999999999999999998653 4689999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheee
Q 009516 444 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523 (533)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k 523 (533)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|
T Consensus 404 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k 483 (503)
T 3iwj_A 404 FSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVK 483 (503)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEE
T ss_pred eCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeE
Confidence 99999999999999999999999999999999999999999999998777789999999999999999999999999999
Q ss_pred EEEEe
Q 009516 524 YVCLG 528 (533)
Q Consensus 524 ~v~~~ 528 (533)
+|+++
T Consensus 484 ~v~~~ 488 (503)
T 3iwj_A 484 QVTQY 488 (503)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-107 Score=872.25 Aligned_cols=468 Identities=35% Similarity=0.581 Sum_probs=447.1
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34568999999998778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCC-C----CceeEEEeeeceEEEEEcCCCcchHHH
Q 009516 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL-P----DRRLFVLKQPVGVAGAITPWNFPLAMI 207 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~I~p~N~P~~~~ 207 (533)
+|++++++|+|||..+++.|+..+++.++||++++++..+...+... + +...+++++|+|||++|+|||||+.+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999999887665443221 2 356788999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHH
Q 009516 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287 (533)
Q Consensus 208 ~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 287 (533)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 249 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred HhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCC
Q 009516 288 GAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367 (533)
Q Consensus 288 ~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 367 (533)
.++ +|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++||
T Consensus 250 ~aa--l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 250 KAK--MIP---VVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HCC--SSC---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred Hcc--CCc---EEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 887 888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCH
Q 009516 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 447 (533)
Q Consensus 368 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~ 447 (533)
|+ +++++||+++..+++++.+++++++++|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~---g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQ---GNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE---TTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCC---CceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 99 99999999999999999999999999999999999753 799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 448 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
||||+++|+++|||++||||+|.++++++++++++|+||||++.. ..+.+||||+|+||+||++|++|+++||+.|+|+
T Consensus 401 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~ 480 (505)
T 3prl_A 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480 (505)
T ss_dssp HHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEE
Confidence 999999999999999999999999999999999999999999876 4578999999999999999999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 481 ~~~ 483 (505)
T 3prl_A 481 LNL 483 (505)
T ss_dssp EEC
T ss_pred EeC
Confidence 763
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-107 Score=870.34 Aligned_cols=466 Identities=35% Similarity=0.579 Sum_probs=441.8
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|
T Consensus 26 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 105 (497)
T 3i44_A 26 RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDM 105 (497)
T ss_dssp CCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEE-eeeceEEEEEcCCCcchHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVL-KQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
++++++|+|||+.+++ .|+..+++.++|+++..........+. .+...+++ ++|+|||++|+|||||+.+.+++++
T Consensus 106 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 183 (497)
T 3i44_A 106 AKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVI 183 (497)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 899999999999998876643322111 14446777 9999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 184 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~ 263 (497)
T 3i44_A 184 PALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNT 263 (497)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++||| |.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 264 ~k~---v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 339 (497)
T 3i44_A 264 LKR---VCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTG 339 (497)
T ss_dssp TCE---EEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCS
T ss_pred CCc---eeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 999 999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCc-ccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
+++||++++.+++++.+++++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 419 (497)
T 3i44_A 340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDE 419 (497)
T ss_dssp SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHH
Confidence 9999999999999999999999999999999994 322 2589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
||+++|+++|||+++|||+|.+++.++++++++|+||||. ....+.+||||+|.||+|+++|++++++||+.|+|+.
T Consensus 420 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~ 496 (497)
T 3i44_A 420 AVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496 (497)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEESC
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEEe
Confidence 9999999999999999999999999999999999999994 4456789999999999999999999999999999864
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-107 Score=873.82 Aligned_cols=470 Identities=39% Similarity=0.620 Sum_probs=449.5
Q ss_pred ccceecCEEeeCCCCCe-EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKT-LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~-~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 20 ~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 99 (503)
T 1a4s_A 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998766778 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||++++++..+...+.. ++...++.++|+|||++|+|||||+.+.++++++
T Consensus 100 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 178 (503)
T 1a4s_A 100 IAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178 (503)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHHHH
Confidence 999999999999999999999999999999999988766544433 3456789999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 179 ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~ 257 (503)
T 1a4s_A 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257 (503)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999987 89999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++
T Consensus 258 ~~---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 334 (503)
T 1a4s_A 258 KH---VTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTET 334 (503)
T ss_dssp CE---EEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred Cc---eEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCccc--C----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH--S----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 447 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~ 447 (533)
++||+++..+++++.+++++++++|+++++||... + ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (503)
T 1a4s_A 335 RMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTE 414 (503)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCH
Confidence 99999999999999999999999999999999764 1 24799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 448 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|++
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 494 (503)
T 1a4s_A 415 EEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494 (503)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEE
Confidence 99999999999999999999999999999999999999999987777889999999999999999999999999999987
Q ss_pred ec
Q 009516 528 GD 529 (533)
Q Consensus 528 ~~ 529 (533)
+.
T Consensus 495 ~~ 496 (503)
T 1a4s_A 495 EM 496 (503)
T ss_dssp CC
T ss_pred cc
Confidence 63
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-106 Score=868.76 Aligned_cols=471 Identities=40% Similarity=0.643 Sum_probs=449.8
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---HhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 3579999999876678999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
++|++++++|+|||+.++. .|+..+++.++||++.+++..+...+. .++...+++++|+|||++|+|||||+.+.+++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 9999999999999999875 699999999999999998877665443 23556789999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987889999999999999999999999999999999
Q ss_pred -cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 291 -GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 291 -~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
+++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 260 ~~~l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 336 (501)
T 1bxs_A 260 KSNLKR---VSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPL 336 (501)
T ss_dssp HTTCCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTT
T ss_pred hccCCc---EEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCc
Confidence 89999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
|+++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 416 (501)
T 1bxs_A 337 TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDD 416 (501)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred ccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976433579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++++++|++.|+|+++.
T Consensus 417 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~ 496 (501)
T 1bxs_A 417 VIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496 (501)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEcc
Confidence 99999999999999999999999999999999999999998766788999999999999999999999999999998863
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-106 Score=867.58 Aligned_cols=472 Identities=39% Similarity=0.641 Sum_probs=450.8
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASE 85 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34679999999876678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 165 (479)
T 2imp_A 86 ISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAP 165 (479)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999887766665444334567789999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 166 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~ 245 (479)
T 2imp_A 166 ALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNI 245 (479)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999977788999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC-CC
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG-EG 372 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~ 372 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|+|+| ++
T Consensus 246 ~~---v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 322 (479)
T 2imp_A 246 TK---VCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERND 322 (479)
T ss_dssp CE---EEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSS
T ss_pred Cc---EEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 323 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~ 402 (479)
T 2imp_A 323 IAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAIS 402 (479)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999976323479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 403 ~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 403 MANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9999999999999999999999999999999999999877678999999999999999999999999999999875
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-106 Score=872.05 Aligned_cols=471 Identities=37% Similarity=0.616 Sum_probs=450.4
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 107 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 186 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPA 186 (515)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHH
Confidence 99999999999999999999999999999999888777655442345677899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 187 LaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~ 266 (515)
T 2d4e_A 187 LAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLK 266 (515)
T ss_dssp HHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999777899999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcc
Q 009516 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 374 (533)
Q Consensus 295 ~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 374 (533)
| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 267 ~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 343 (515)
T 2d4e_A 267 R---LSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETE 343 (515)
T ss_dssp E---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred c---eEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCc
Confidence 9 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--------CCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 375 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 375 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
+||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+|
T Consensus 344 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~ 422 (515)
T 2d4e_A 344 VGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKD 422 (515)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCC
Confidence 99999999999999999999999999999997642 1589999999999 99999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|+
T Consensus 423 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~ 502 (515)
T 2d4e_A 423 EEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIA 502 (515)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEE
Confidence 99999999999999999999999999999999999999999998777789999999999999999999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 503 ~~~ 505 (515)
T 2d4e_A 503 LPL 505 (515)
T ss_dssp EES
T ss_pred EcC
Confidence 863
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-106 Score=867.30 Aligned_cols=470 Identities=36% Similarity=0.614 Sum_probs=448.1
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.+.++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 22 ~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 22 MQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456899999998655 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.+++. |+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 9999999999999999998 999999999999999887766654433235567899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999778899999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|||+|+
T Consensus 260 ~l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 336 (495)
T 1wnd_A 260 SIKR---THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDE 336 (495)
T ss_dssp GTCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTST
T ss_pred cCCc---cccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccC
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCC-CeEEeCCc-ccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++||++++.+++++.+++++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 ~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 415 (495)
T 1wnd_A 337 STELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ 415 (495)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHH
Confidence 999999999999999999999999999 99999997 53 2579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 416 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 416 VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999999999999999999999999999999999776678999999999999999999999999999999874
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-106 Score=869.22 Aligned_cols=470 Identities=39% Similarity=0.616 Sum_probs=449.2
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---HhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876778999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.++. .|+..+++.++||++.+++..+...+. .++...+++++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 999999999999999875 699999999999999988876665443 235567899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh-
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 290 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~- 290 (533)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999977889999999999999999999999999999999
Q ss_pred cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 291 ~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
+++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|
T Consensus 260 ~~l~p---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 336 (500)
T 1o04_A 260 SNLKR---VTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFD 336 (500)
T ss_dssp TTCCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTS
T ss_pred hcCce---EEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCccc
Confidence 89999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 337 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 416 (500)
T 1o04_A 337 SKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEV 416 (500)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred ccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999764335799999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
|+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++++++|++.|+|+++.
T Consensus 417 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 417 VGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 9999999999999999999999999999999999999998776788999999999999999999999999999998864
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-106 Score=872.24 Aligned_cols=472 Identities=27% Similarity=0.464 Sum_probs=449.0
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 26 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (521)
T 4e4g_A 26 ELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNE 105 (521)
T ss_dssp EECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||+++.+.+.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 185 (521)
T 4e4g_A 106 LAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAP 185 (521)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999887776654433334567889999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ .+.++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 186 ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l 264 (521)
T 4e4g_A 186 AIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNG 264 (521)
T ss_dssp HHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999995 566799999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
|| +++|||||||+||++|||++.|++.+++++|.|+||.|+|++|+|||++ ++|+|+++|+++++++++|+|++++
T Consensus 265 kp---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~ 341 (521)
T 4e4g_A 265 KR---AQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEK 341 (521)
T ss_dssp CE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTT
T ss_pred CC---eeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCcc
Confidence 99 9999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ 448 (533)
+++||+++..+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 342 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 421 (521)
T 4e4g_A 342 ADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYE 421 (521)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHH
Confidence 9999999999999999999999999999999997531 358999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCC--CCChHHHHHhhheeeEE
Q 009516 449 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYV 525 (533)
Q Consensus 449 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G--~~gg~~~l~~~~~~k~v 525 (533)
|||+++|+++|||++||||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 422 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v 501 (521)
T 4e4g_A 422 EALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTI 501 (521)
T ss_dssp HHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEE
Confidence 999999999999999999999999999999999999999998654 468999999999999 78999999999999999
Q ss_pred EEec
Q 009516 526 CLGD 529 (533)
Q Consensus 526 ~~~~ 529 (533)
+++.
T Consensus 502 ~~~~ 505 (521)
T 4e4g_A 502 TSRW 505 (521)
T ss_dssp EECC
T ss_pred EEec
Confidence 8864
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-107 Score=873.59 Aligned_cols=468 Identities=36% Similarity=0.600 Sum_probs=448.0
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 93 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDA 93 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999887889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHH----HhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
|++++++|+|||+.++ |+..+++.++||++++++ +.+...+. .++. .+++++|+|||++|+|||||+.+.++
T Consensus 94 la~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~ 169 (517)
T 3r31_A 94 LSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQIACW 169 (517)
T ss_dssp HHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHHHHH
Confidence 9999999999999999 999999999999999988 66665543 2345 89999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 170 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 248 (517)
T 3r31_A 170 KAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 788999999999999999999999999999999
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
++++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+
T Consensus 249 a~~lk~---v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 325 (517)
T 3r31_A 249 AGHLKH---VTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325 (517)
T ss_dssp HHTTCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred hcCCCc---EEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
|+++++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 326 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (517)
T 3r31_A 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDD 405 (517)
T ss_dssp STTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECC
T ss_pred CcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCC
Confidence 9999999999999999999999999999999999993121 2589999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+
T Consensus 406 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~ 485 (517)
T 3r31_A 406 EDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVY 485 (517)
T ss_dssp HHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEE
T ss_pred HHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877889999999999999999999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 486 ~~~ 488 (517)
T 3r31_A 486 VST 488 (517)
T ss_dssp ECC
T ss_pred EcC
Confidence 763
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-106 Score=869.02 Aligned_cols=469 Identities=34% Similarity=0.564 Sum_probs=448.2
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 9 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKD 88 (495)
T ss_dssp SSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999876678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.+++ .|+..+++.++||++++++..+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 89 LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 999999999999999998 8999999999999999888776654422 23467899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 88899999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+
T Consensus 247 ~l~p---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 323 (495)
T 3b4w_A 247 MLKP---CTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDP 323 (495)
T ss_dssp TTCC---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCT
T ss_pred cCCc---eeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccC
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 324 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 403 (495)
T 3b4w_A 324 AAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEED 403 (495)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHH
Confidence 99999999999999999999999999999999997643 2579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||+++|+++|||+++|||+|.+++.++++++++|+||||++. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 404 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 404 AIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 999999999999999999999999999999999999999977 6789999999999999999999999999999998753
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-106 Score=869.30 Aligned_cols=470 Identities=30% Similarity=0.497 Sum_probs=448.8
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
...++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRK 113 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3467899999997 588999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHH-HHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE-AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
++|++++++|+|||+.+++.|+..+++.++||+++ .+...+...+.. ++...++.++|+|||++|+|||||+.+.+++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 192 (538)
T 3qan_A 114 HEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGT 192 (538)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999999 666666655432 3677899999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 193 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 272 (538)
T 3qan_A 193 AVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272 (538)
T ss_dssp HHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cC------ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCc
Q 009516 291 GT------VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 364 (533)
Q Consensus 291 ~~------~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 364 (533)
++ +|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 273 ~~~~~~~~lkp---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 349 (538)
T 3qan_A 273 VVRPGQNHLKR---VIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT 349 (538)
T ss_dssp SCCTTCCSCCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred hcccccccccc---EEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence 88 888 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEee
Q 009516 365 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444 (533)
Q Consensus 365 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~ 444 (533)
+|||+|+++++||+++..+++++.+++++++.+| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 350 vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 428 (538)
T 3qan_A 350 VGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA 428 (538)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEe
Confidence 9999999999999999999999999999999999 999999875335899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEEC-CCCCC-CCCCCccCcCCCCCC-CCChHHHHHhhhe
Q 009516 445 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLE 521 (533)
Q Consensus 445 ~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN-~~~~~-~~~~PfGG~~~SG~G-~~gg~~~l~~~~~ 521 (533)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|||| ++... .+.+||||+|+||+| +++|++|+++||+
T Consensus 429 ~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~ 508 (538)
T 3qan_A 429 NDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQ 508 (538)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999 55554 789999999999999 9999999999999
Q ss_pred eeEEEEec
Q 009516 522 IKYVCLGD 529 (533)
Q Consensus 522 ~k~v~~~~ 529 (533)
.|+|+++.
T Consensus 509 ~k~v~~~~ 516 (538)
T 3qan_A 509 AKTVSEMY 516 (538)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEec
Confidence 99998864
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-106 Score=861.49 Aligned_cols=469 Identities=58% Similarity=0.986 Sum_probs=448.8
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999753 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 91 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (487)
T 2w8n_A 91 ARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAA 170 (487)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999888766654443346678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceeccc---CChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~---g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |++.++++.|++||+|++|+||||+.+|+.|++.+++
T Consensus 171 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 250 (487)
T 2w8n_A 171 LAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN 250 (487)
T ss_dssp HHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHT
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 8677889999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-CccCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFG 370 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~ 370 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.+++++ +++|||++
T Consensus 251 ~~~p---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~ 327 (487)
T 2w8n_A 251 SVKR---VSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFE 327 (487)
T ss_dssp TTCE---EEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred cCCc---EEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCccc
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCc-eeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~-~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
+++++||+++..+++++.+++++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 328 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~e 406 (487)
T 2w8n_A 328 EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEE 406 (487)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHH
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999764 2478 999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++++++||+.|+|+++.
T Consensus 407 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~~ 486 (487)
T 2w8n_A 407 AIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGG 486 (487)
T ss_dssp HHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEECC
T ss_pred HHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEec
Confidence 99999999999999999999999999999999999999998877778999999999999999999999999999998764
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-105 Score=854.70 Aligned_cols=457 Identities=38% Similarity=0.647 Sum_probs=432.8
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (533)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999985 56 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhh
Q 009516 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (533)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 216 (533)
++++|+|||..+++.|+..+++.++||++.+++..+...+.. +...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSD--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCT--TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC--CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988776655432 567899999999999999999999999999999999
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHc----CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||+||+|||+.+|+++..+++++.++ |+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 99999999999988888999999999999999999999999999887
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 235 ~~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 FKK---IALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp SSE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred CCc---eeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 788 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||+++..+++++.+++++++.+|+++++||... |+|++|||+ +++++|++++||+||||++|++|+| ||||+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~---g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~ 386 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRD---KALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID 386 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE---TTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCC---CcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence 999999999999999999999999999999999763 699999999 9999999999999999999999999 99999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 387 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 387 IANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp HHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999999865 335899999999999999999999999999999876
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-105 Score=855.44 Aligned_cols=469 Identities=32% Similarity=0.553 Sum_probs=428.1
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (485)
T 4dng_A 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDI 86 (485)
T ss_dssp CSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999998777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCC-CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
++++++|+|||+.+++.|+..+++.++|+++..+++.+...+.. .++...+++++|+|||++|+|||||+...++++++
T Consensus 87 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 166 (485)
T 4dng_A 87 IMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAP 166 (485)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999887766655433 34577899999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHH-HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 214 ALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~-~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
||++||+||+|||+.+|+++ ..|.+++.++|+|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 167 ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~ 246 (485)
T 4dng_A 167 AIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246 (485)
T ss_dssp HHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhh
Confidence 99999999999999999999 99999999999999999999998888999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|++
T Consensus 247 ~~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~ 323 (485)
T 4dng_A 247 FKR---MALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPK 323 (485)
T ss_dssp TCE---EEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTT
T ss_pred ccc---hhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCC
Confidence 998 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 324 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~ 400 (485)
T 4dng_A 324 TVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAID 400 (485)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976 379999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+|+++|++++++||+.|+|+++.
T Consensus 401 ~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 401 MANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999998754 678999999999999999999999999999998864
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-105 Score=858.21 Aligned_cols=469 Identities=34% Similarity=0.565 Sum_probs=433.1
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (508)
T 3r64_A 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREE 91 (508)
T ss_dssp TTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999887789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCC-CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||..+++.|+..+++.++||++++++..+ ..+.. .++...+++++|+|||++|+|||||+.+.+++++
T Consensus 92 la~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 170 (508)
T 3r64_A 92 IVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVA 170 (508)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 999999999999999999999999999999998877665 44432 3467789999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHH-HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 213 PALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~-~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
+||++||+||+|||+.+|+++ ..|++++.++|+|+|++|+|+|++.+.++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 171 ~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~ 250 (508)
T 3r64_A 171 PALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAIN 250 (508)
T ss_dssp HHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHS
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhc
Confidence 999999999999999999999 9999999999999999999999878999999999999999999999999999999988
Q ss_pred --CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 292 --TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 292 --~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+
T Consensus 251 ~~~l~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 327 (508)
T 3r64_A 251 GGPMKT---VALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPS 327 (508)
T ss_dssp SSSCCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred ccCCCc---eEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCc
Confidence 8888 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++++||++++.+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 328 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (508)
T 3r64_A 328 AEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAH 404 (508)
T ss_dssp SSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHH
T ss_pred cCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976 379999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 405 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~ 484 (508)
T 3r64_A 405 AAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIK 484 (508)
T ss_dssp HHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEEEEE
T ss_pred HHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999998754 67899999999999999999999999999999886
Q ss_pred c
Q 009516 529 D 529 (533)
Q Consensus 529 ~ 529 (533)
.
T Consensus 485 ~ 485 (508)
T 3r64_A 485 R 485 (508)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-105 Score=853.28 Aligned_cols=453 Identities=30% Similarity=0.492 Sum_probs=438.0
Q ss_pred eEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh
Q 009516 71 TLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV 150 (533)
Q Consensus 71 ~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 150 (533)
+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCch
Q 009516 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230 (533)
Q Consensus 151 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp 230 (533)
.|+..+++.++||++.+++..+...+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 9999999999999999988877654433 466889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEE
Q 009516 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI 310 (533)
Q Consensus 231 ~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~i 310 (533)
+++..|++++.++|+|+|++|+|+|++.++++ |+.||+|++|+||||+.+|+.|++.+++++|| +++|||||||+|
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~---v~lELGGk~p~i 239 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKK---STMELGGNDAFI 239 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCE---EEEECCCCCEEE
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCc---eEeecCCCCcce
Confidence 99999999999999999999999998888888 99999999999999999999999999999999 999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHH
Q 009516 311 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 390 (533)
Q Consensus 311 V~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 390 (533)
|++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|+++++||+++..+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009516 391 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470 (533)
Q Consensus 391 i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 470 (533)
+++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999999986444689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 471 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 471 ~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 457 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDV 457 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEEC
Confidence 9999999999999999999877788999999999999999999999999999999876
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-104 Score=849.40 Aligned_cols=462 Identities=34% Similarity=0.567 Sum_probs=441.2
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|+
T Consensus 6 ~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 83 (475)
T 1euh_A 6 KNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIG 83 (475)
T ss_dssp CEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred ceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999997633 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCC----cee-EEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD----RRL-FVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
+++++|+|||+.+++.|+..+++.++||++++++..+...+...++ ... ++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (475)
T 1euh_A 84 AILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSK 163 (475)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHH
Confidence 9999999999999999999999999999999887666544433234 466 89999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 164 ~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 243 (475)
T 1euh_A 164 IAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243 (475)
T ss_dssp HHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999977789999999999999999999999999999887
Q ss_pred cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 291 ~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|||++
T Consensus 244 --~~~---v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 318 (475)
T 1euh_A 244 --MRP---IMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318 (475)
T ss_dssp --TSC---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG
T ss_pred --CCc---EEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc
Confidence 788 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 319 -~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ea 394 (475)
T 1euh_A 319 -DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEA 394 (475)
T ss_dssp -TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHH
T ss_pred -cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHH
Confidence 999999999999999999999999999999999976 3699999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECC-CCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~-~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+++|+++|||+++|||+|.++++++++++++|+|+||+ +....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 395 i~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 395 IEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 999999999999999999999999999999999999998 666678999999999999999999999999999999875
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-104 Score=854.79 Aligned_cols=469 Identities=29% Similarity=0.495 Sum_probs=443.8
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQV 100 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999994 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++|++++++++.+...+...++...+++++|+|||++|+|||||+.++++++++
T Consensus 101 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 180 (500)
T 2j6l_A 101 LGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAI 180 (500)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHH
Confidence 99999999999999999999999999999999887776655444334555678999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHH----HcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 181 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~a 259 (500)
T 2j6l_A 181 AMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMV 259 (500)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHh
Confidence 9999999999999999999999988866 56999999999999 778999999999999999999999999999999
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
++++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.
T Consensus 260 a~~l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 336 (500)
T 2j6l_A 260 QERFGR---SLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPW 336 (500)
T ss_dssp HHTTCE---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred ccCCCc---eEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcc
Confidence 999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 416 (500)
T 2j6l_A 337 DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEE 416 (500)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHH
T ss_pred cCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHH
Confidence 99999999999999999999999999999999999976433579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHH--hhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVS--EALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a--~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
||+++|+++|||+++|||+|.+++++++ .++++|+||||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 417 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~ 496 (500)
T 2j6l_A 417 VFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCT 496 (500)
T ss_dssp HHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEE
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999 779999999998755 3468999999999999999999999999999998
Q ss_pred Ee
Q 009516 527 LG 528 (533)
Q Consensus 527 ~~ 528 (533)
++
T Consensus 497 ~~ 498 (500)
T 2j6l_A 497 IN 498 (500)
T ss_dssp EE
T ss_pred Ee
Confidence 75
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-104 Score=852.27 Aligned_cols=467 Identities=31% Similarity=0.513 Sum_probs=442.1
Q ss_pred ccceecCEEeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467999999963 6799999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccC-CCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||+.+++.|+..+++.++||++.+++..+...+ ...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 195 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195 (516)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999999888765432 223456778999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh--
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-- 290 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~-- 290 (533)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 196 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~ 275 (516)
T 1uzb_A 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRL 275 (516)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999977889999999999999999999999999999998
Q ss_pred ----cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccC
Q 009516 291 ----GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 291 ----~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 366 (533)
+++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|
T Consensus 276 ~~~~~~~~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 276 APGQTWFKR---AYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp CTTCCSCCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred cccccccce---eEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 77888 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
+| ++++++||++++.+++++.+++++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 430 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999999 89999976323579999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCcCCCCCC-CCChHHHHHhhheee
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEFLEIK 523 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~--~~~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k 523 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+| +++|.+++++||+.|
T Consensus 431 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k 510 (516)
T 1uzb_A 431 FAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMK 510 (516)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCee
Confidence 9999999999999999999999999999999999999999998654 3468999999999999 579999999999999
Q ss_pred EEEEe
Q 009516 524 YVCLG 528 (533)
Q Consensus 524 ~v~~~ 528 (533)
+|+++
T Consensus 511 ~v~~~ 515 (516)
T 1uzb_A 511 AVAER 515 (516)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99874
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-104 Score=853.70 Aligned_cols=464 Identities=31% Similarity=0.504 Sum_probs=442.4
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-HhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 96 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 96 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4579999999863 7899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCC--CC--CceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LP--DRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
|++++++|+|||+.+++.|+..+++.++||++++++..+...+.. .. +...+++++|+|||++|+|||||+.+.++
T Consensus 97 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (501)
T 1uxt_A 97 FAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVN 176 (501)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHH
Confidence 999999999999999999999999999999999888766554432 12 33678999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~a 255 (501)
T 1uxt_A 177 KITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVG 255 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999977 8999999999999999999999999999988
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
+ +|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|||+
T Consensus 256 a--l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 330 (501)
T 1uxt_A 256 G--VKQ---YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330 (501)
T ss_dssp C--SSE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred C--CCe---EEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCcc
Confidence 7 888 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCC-ceeecEEeccCC---CCCcccccccccceEEEEeeC
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVK---SEMLVSREEVFGPVAPLLCFK 445 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~-~~~~Ptvl~~~~---~~~~~~~eE~FGPv~~v~~~~ 445 (533)
|+++++||++++.+++++.+++++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+
T Consensus 331 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~ 407 (501)
T 1uxt_A 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVK 407 (501)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeC
Confidence 99999999999999999999999999999999999976 36 899999999999 999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCC-CCCCCCCCccCcCCCCCCCCChHHHHHhhheeeE
Q 009516 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524 (533)
Q Consensus 446 ~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~-~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~ 524 (533)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|++++++||+.|+
T Consensus 408 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~ 487 (501)
T 1uxt_A 408 DLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKT 487 (501)
T ss_dssp SHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeE
Confidence 999999999999999999999999999999999999999999987 5566789999999999999999999999999999
Q ss_pred EEEec
Q 009516 525 VCLGD 529 (533)
Q Consensus 525 v~~~~ 529 (533)
|+++.
T Consensus 488 v~~~~ 492 (501)
T 1uxt_A 488 IVFNY 492 (501)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98863
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-104 Score=847.54 Aligned_cols=470 Identities=32% Similarity=0.540 Sum_probs=445.0
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
++++++|+|||+.+++.|+..+++.++||+.+.+.+.+...+...++...+++++|+|||++|+|||||+.+.++++++|
T Consensus 86 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 165 (486)
T 1t90_A 86 AHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMA 165 (486)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999988777766543322235567899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 166 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~ 244 (486)
T 1t90_A 166 IALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244 (486)
T ss_dssp HHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999 46789999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCe-EEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR-VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 295 ~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
| +++|||||||+||++|||++.|++.+++++|.|+||.|++++| +|||++ +|+|+++|.++++++++|+|+++++
T Consensus 245 p---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~ 320 (486)
T 1t90_A 245 R---VQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGV 320 (486)
T ss_dssp E---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTC
T ss_pred c---EEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCC
Confidence 9 9999999999999999999999999999999999999999999 999999 9999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~ 400 (486)
T 1t90_A 321 FLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIE 400 (486)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999997432 2479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCC--CCChHHHHHhhheeeEEEEec
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G--~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|++|+++||+.|+|+++.
T Consensus 401 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 401 IANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp HHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999986543 468999999999999 899999999999999998763
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-104 Score=847.39 Aligned_cols=464 Identities=36% Similarity=0.591 Sum_probs=421.5
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 87 (478)
T 3ty7_A 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDI 87 (478)
T ss_dssp CEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46799999999878899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHH-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
++++++|+|||+.++ ..|+..+++.++||++.+++..+... +...+++++|+|||++|+|||||+.+.++++++
T Consensus 88 a~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (478)
T 3ty7_A 88 VQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAA 162 (478)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999 78999999999999999887655431 245788999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~ 242 (478)
T 3ty7_A 163 AFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDF 242 (478)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTT
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++
T Consensus 243 ~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 319 (478)
T 3ty7_A 243 KK---VSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGT 319 (478)
T ss_dssp CE---EECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred Cc---eEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 320 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eA 399 (478)
T 3ty7_A 320 QVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEA 399 (478)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHH
Confidence 999999999999999999999999999999994322 35899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|+++|+++|||+++|||+|.++++++++++++|+||||+ ....+.+||||+|+||+|+++|++++++||+.|+|+.
T Consensus 400 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 400 IQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999999 5556789999999999999999999999999999873
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-102 Score=832.48 Aligned_cols=457 Identities=35% Similarity=0.547 Sum_probs=438.6
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009516 68 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (533)
Q Consensus 68 ~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (533)
+..+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 35779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCC
Q 009516 148 EAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (533)
Q Consensus 148 ~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (533)
+++.|+..+++.++||++.+++..+.. +...++...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999999998877654 3333456788999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCC
Q 009516 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307 (533)
Q Consensus 228 ~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~ 307 (533)
.+|+++..+++++.++|+|+|++|+|+|+ .+.+..|+.||+|++|+||||+.+|+.|++.+++++|| +++||||||
T Consensus 164 ~tp~~~~~l~~~l~~aglP~gv~~vv~g~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~---v~lElGGk~ 239 (462)
T 3etf_A 164 NVTGCAQMIARILAEAGTPAGVYGWVNAN-NEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKK---CVLELGGSD 239 (462)
T ss_dssp TCHHHHHHHHHHHHHTTCCBTTEEECCCC-HHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCC---EEEECCCCE
T ss_pred CCcHHHHHHHHHHHHhCCCcCeEEEEECC-HHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCc---eEEEcCCCC
Confidence 99999999999999999999999999994 57789999999999999999999999999999999999 999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHH
Q 009516 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 387 (533)
Q Consensus 308 ~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~ 387 (533)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEc
Q 009516 388 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467 (533)
Q Consensus 388 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s 467 (533)
.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999986544689999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 468 ~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++.
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999999998877789999999999999999999999999999998865
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-102 Score=839.13 Aligned_cols=475 Identities=23% Similarity=0.348 Sum_probs=442.5
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHh
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (533)
..+.++||||+|+.+ +..+.++||.| |+++++++.++.+|+++|+++|++||+.|+.++..+|+++|++++++|+++
T Consensus 61 ~~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~ 138 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGP 138 (563)
T ss_dssp CEECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred CccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 345678999999985 45788999998 899999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHcCCCHHHHhHH-HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHH
Q 009516 131 -KEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (533)
Q Consensus 131 -~~~la~~~~~e~Gk~~~~a~~E-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 208 (533)
+++|+.++++|+|||+.+++.| +..++++++||++.++++.+.......++...+.++.|+|||++|+|||||+....
T Consensus 139 ~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~ 218 (563)
T 4e3x_A 139 RRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGN 218 (563)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHH
T ss_pred cHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHH
Confidence 9999999999999999999987 99999999999999988876532222223445677788899999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
+++++|| +||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 219 ~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 219 LAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 599999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred hhcCccc---cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc
Q 009516 289 AAGTVKK---VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 365 (533)
Q Consensus 289 ~~~~~k~---~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 365 (533)
+++++|| ..|+++|||||||+||++|||+|.|++.+++++|.|+||.|+|++|+|||+++||+|+++|+++++++++
T Consensus 298 aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 298 VAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp HHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccC
Confidence 9988874 2359999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCcccCcccCHHHHHHHHHHHHHHHH-CCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEe
Q 009516 366 GDG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 443 (533)
Q Consensus 366 G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~ 443 (533)
||| .|+++++||++++.+++++.++|+++++ +|+++++||..++..|+|++|||+.+++++|++++||+||||++|++
T Consensus 378 Gdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 457 (563)
T 4e3x_A 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYV 457 (563)
T ss_dssp SCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEE
T ss_pred CCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEE
Confidence 999 9999999999999999999999999996 89999999987544689999999999999999999999999999999
Q ss_pred eCC--HHHHHHHH-HcCCCCcEEEEEcCCHHHHHHHHhhcc--eeEEEECCCCCC--CCCCCccCcCCCCCC-CCChHHH
Q 009516 444 FKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYG 515 (533)
Q Consensus 444 ~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~V~iN~~~~~--~~~~PfGG~~~SG~G-~~gg~~~ 515 (533)
|+| +||||+++ |+++|||+++|||+|.+++.+++++++ +|+||||+.... .+.+||||+|.||+| +++|+++
T Consensus 458 ~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~ 537 (563)
T 4e3x_A 458 YPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHY 537 (563)
T ss_dssp ECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTG
T ss_pred ECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHH
Confidence 997 69999999 799999999999999999999999976 999999997643 467999999999998 8899999
Q ss_pred HHhhheeeEEEEec
Q 009516 516 MDEFLEIKYVCLGD 529 (533)
Q Consensus 516 l~~~~~~k~v~~~~ 529 (533)
|++|++.|+|..+.
T Consensus 538 l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 538 ILRWTSPQVIKETH 551 (563)
T ss_dssp GGGGBCCEEEEEEC
T ss_pred HHHhCceEEEEEeC
Confidence 99999999998764
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-100 Score=817.11 Aligned_cols=461 Identities=30% Similarity=0.456 Sum_probs=436.2
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 6 ~~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 84 (490)
T 3ju8_A 6 STHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADEL 84 (490)
T ss_dssp CCEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999986 3578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
++++++|+|||+.+++.|+..+++.++|+++..++..+...+.. .+...+++++|+|||++|+|||||+.+.++++++|
T Consensus 85 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 163 (490)
T 3ju8_A 85 ARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPA 163 (490)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999998887766543321 24456778999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 164 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~ 242 (490)
T 3ju8_A 164 LLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242 (490)
T ss_dssp HHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTT
T ss_pred HHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999 57899999999999999999999999999999999999
Q ss_pred cccee-eecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHhhcCccCC-CCCC
Q 009516 295 KVCRV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD-GFGE 371 (533)
Q Consensus 295 ~~~~~-~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~-p~~~ 371 (533)
| + ++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.|+
T Consensus 243 ~---v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~ 319 (490)
T 3ju8_A 243 K---ILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQP 319 (490)
T ss_dssp S---EEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSS
T ss_pred C---cEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8 8 7999999999999999999999999999999999999999999999996 9999999999999999999 9999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|+|+||||
T Consensus 320 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi 398 (490)
T 3ju8_A 320 APFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAI 398 (490)
T ss_dssp CCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHH
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999999997654568999999999 99999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||++ ++++||+.|+|++.
T Consensus 399 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 399 REANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYP 470 (490)
T ss_dssp HHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEE
T ss_pred HHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEe
Confidence 99999999999999999999999999999999999999765 4578999999999985 58999999998875
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-100 Score=816.55 Aligned_cols=454 Identities=29% Similarity=0.434 Sum_probs=429.7
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009516 68 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (533)
Q Consensus 68 ~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (533)
+.++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhCc-ccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecC
Q 009516 148 EAVGEVDYGAKFIEFYAEEAKRVYGE-IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226 (533)
Q Consensus 148 ~a~~Ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 226 (533)
++..|+..++..+++|+..+.+.... ..+...++......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 55689999999999999888776543 23333456667788999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCC
Q 009516 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGN 306 (533)
Q Consensus 227 ~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~ 306 (533)
+.+|+++..+++++.++|+|+|++|+++| +.+.+..|+.| +++|+||||+.+|+.|++.+++++|| +++|||||
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~---v~lElGGk 236 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAARRFIP---AYLELGGK 236 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCC---EEEECCCC
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhccccc---ccccCCCc
Confidence 99999999999999999999999999999 56788899976 89999999999999999999999999 99999999
Q ss_pred CcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHH
Q 009516 307 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 386 (533)
Q Consensus 307 ~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~ 386 (533)
||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++..+.++
T Consensus 237 ~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (474)
T 4h7n_A 237 DPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGI 316 (474)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHH
T ss_pred CccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEE
Q 009516 387 VETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465 (533)
Q Consensus 387 ~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v 465 (533)
+.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 317 v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 396 (474)
T 4h7n_A 317 INDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAV 396 (474)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEE
Confidence 99999999999999999998765 56899999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCcCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009516 466 FTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 466 ~s~d~~~~~~~a~~l~~G~V~iN~~~~~--~~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k~v~~~ 528 (533)
||+|.++++++++++++|+|+||+.... .+..||||+|.||+| +++|.+|+++|++.|+|+++
T Consensus 397 ~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~ 462 (474)
T 4h7n_A 397 FAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIK 462 (474)
T ss_dssp ECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEEC
Confidence 9999999999999999999999987653 468999999999998 78999999999999999886
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-100 Score=865.67 Aligned_cols=471 Identities=30% Similarity=0.453 Sum_probs=447.4
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
...++||||+|+.+ +++++++||+| ++++++++.++.+|+++|+++|++||+.|+.++..+|+++|++++++|++++
T Consensus 530 ~~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~ 607 (1026)
T 4f9i_A 530 KTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRL 607 (1026)
T ss_dssp EEECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 35678999999974 78999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
++|+.++++|+|||+.++..|+..++++++||+.+++++.+...+...++..++..++|+|||++|+|||||+.+.++++
T Consensus 608 ~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~ 687 (1026)
T 4f9i_A 608 FELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMA 687 (1026)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999988876544333457788899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh-
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 290 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~- 290 (533)
++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 688 a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~ 767 (1026)
T 4f9i_A 688 SAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAK 767 (1026)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred -----cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc
Q 009516 291 -----GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 365 (533)
Q Consensus 291 -----~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 365 (533)
+++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|+|++|+|||++++|+|+++|+++++++++
T Consensus 768 ~~~~~~~lkp---v~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 768 VHPGQANVKK---IISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp CCTTCCSCCE---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred ccccccCccc---eEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 35677 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeC
Q 009516 366 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 445 (533)
Q Consensus 366 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~ 445 (533)
|+|.++++++||+|++.+++++.++|++++++| ++++||..++..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999997654348999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCcCCCCCCC-CChHHHHHhhhee
Q 009516 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEI 522 (533)
Q Consensus 446 ~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~--~~~~PfGG~~~SG~G~-~gg~~~l~~~~~~ 522 (533)
|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+...+ .+.+||||+|.||+|+ +||++++++|++.
T Consensus 924 d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~ 1003 (1026)
T 4f9i_A 924 DFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDP 1003 (1026)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceE
Confidence 999999999999999999999999999999999999999999997653 3679999999999995 5999999999999
Q ss_pred eEEEEec
Q 009516 523 KYVCLGD 529 (533)
Q Consensus 523 k~v~~~~ 529 (533)
|+|+++.
T Consensus 1004 k~v~~~~ 1010 (1026)
T 4f9i_A 1004 RVVTENT 1010 (1026)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998864
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-99 Score=817.07 Aligned_cols=465 Identities=22% Similarity=0.325 Sum_probs=425.6
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.++..+|.++|+++++.|++++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45799999997643 579999999999999999988 8999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhC-------cccCCCCCCc-eeEEEeeec-eEEEEEcCCCcch
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-------EIIPATLPDR-RLFVLKQPV-GVAGAITPWNFPL 204 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~-------~~~~~~~~~~-~~~~~~~P~-GVv~~I~p~N~P~ 204 (533)
|++++++|+|||+.+++.|+..+++.++||++.++++.+ ...+...++. ..+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 999999999999999999999999999999998877643 2122222222 457889997 9999999999999
Q ss_pred HHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHH
Q 009516 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283 (533)
Q Consensus 205 ~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 283 (533)
.++++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.++++.| +++++|+||||+.+|+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~ 242 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAA 242 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 79999999998654443333 5799999999999999
Q ss_pred HHHHHhh--cCccccceeeecCCCCCcEEEccCC-----CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHH
Q 009516 284 KLMAGAA--GTVKKVCRVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356 (533)
Q Consensus 284 ~i~~~~~--~~~k~~~~~~lElgG~~~~iV~~dA-----d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l 356 (533)
.|++.++ +++|| +++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 243 ~i~~~aa~a~~~k~---v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 319 (534)
T 2y53_A 243 TLRAHPAFVQRGAR---LNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319 (534)
T ss_dssp HHHTSHHHHTTCCE---EEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred HHHHhhhhhcCCCc---EEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence 9998875 78898 99999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCccc-----C-CCCceeecEEeccCCCC--Cc
Q 009516 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-----S-LGMTFYEPTVLSNVKSE--ML 428 (533)
Q Consensus 357 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-----~-~~~~~~~Ptvl~~~~~~--~~ 428 (533)
+++++++++|||+|+++++||++++.+++++.++|+++ .+|+++++||... + ..|+|++|||+.+++++ |+
T Consensus 320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~ 398 (534)
T 2y53_A 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL 398 (534)
T ss_dssp HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSS
T ss_pred HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCH
Confidence 99999999999999999999999999999999999999 6999999999742 1 24799999999999887 68
Q ss_pred ccccccccceEEEEeeC---CH-----HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc--ceeEEEECCCCC------
Q 009516 429 VSREEVFGPVAPLLCFK---TE-----EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI------ 492 (533)
Q Consensus 429 ~~~eE~FGPv~~v~~~~---~~-----~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l--~~G~V~iN~~~~------ 492 (533)
+++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+||||++..
T Consensus 399 i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~ 478 (534)
T 2y53_A 399 LHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTG 478 (534)
T ss_dssp TTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCC
T ss_pred HHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccc
Confidence 99999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ---CCCCCCccCcCCCCCCCC-ChHHHHHhhheeeEEEEe
Q 009516 493 ---STEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 493 ---~~~~~PfGG~~~SG~G~~-gg~~~l~~~~~~k~v~~~ 528 (533)
..+.+||||+|.||+|++ +|++++++|++.|+|...
T Consensus 479 ~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 479 HGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp SSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred cCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 246899999999999999 799999999999998764
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-96 Score=784.54 Aligned_cols=445 Identities=25% Similarity=0.388 Sum_probs=402.5
Q ss_pred CCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 009516 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 148 (533)
Q Consensus 69 ~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 148 (533)
-..+++.||.||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 84 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV 84 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hh-HHHHHHHHHHHHHHHHHHHHhCcc-cCC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEe
Q 009516 149 AV-GEVDYGAKFIEFYAEEAKRVYGEI-IPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 224 (533)
Q Consensus 149 a~-~Ev~~~~~~l~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlK 224 (533)
++ .|+..+++.++|+++.+++..+.. .+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 85 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 164 (457)
T 3lns_A 85 VDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIK 164 (457)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 98 599999999999999988765431 211 12356788999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCC
Q 009516 225 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELG 304 (533)
Q Consensus 225 ps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElg 304 (533)
||+.+|+++..+++++.++ +|+|++|+|+| +.+.++.|+. ++|++|+||||+.+|+.|++.+++++|| +++|||
T Consensus 165 ps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~p---v~lElG 238 (457)
T 3lns_A 165 PSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTP---VVLELG 238 (457)
T ss_dssp CCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCC---EEEECC
T ss_pred CCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCc---eEEECC
Confidence 9999999999999999999 99999999999 6788999998 6899999999999999999999999999 999999
Q ss_pred CCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHH
Q 009516 305 GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 384 (533)
Q Consensus 305 G~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 384 (533)
||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||+++++++
T Consensus 239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~ 313 (457)
T 3lns_A 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQV 313 (457)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHH
T ss_pred CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 7776 99999999999
Q ss_pred HHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHc-CCCCcEE
Q 009516 385 EKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND-TNAGLAA 463 (533)
Q Consensus 385 ~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~-~~~gL~a 463 (533)
+++.++++++ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 314 ~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 314 QRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 9999999975 36999999764 35799999999999999999999999999999999999999999999 9999999
Q ss_pred EEEcCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 464 YIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 464 ~v~s~d~~~~~~~a~~l~~G~V~iN~~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 390 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 390 YVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999999999999999999999754 467899999999999999999999999999999864
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-95 Score=773.75 Aligned_cols=428 Identities=29% Similarity=0.446 Sum_probs=397.4
Q ss_pred CCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHH
Q 009516 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA 167 (533)
Q Consensus 89 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~ 167 (533)
.+.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++..++|+++..
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999997 59999999999988877
Q ss_pred HHHhCcccC---CCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC
Q 009516 168 KRVYGEIIP---ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 244 (533)
Q Consensus 168 ~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aG 244 (533)
.+....... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 655432111 1112456889999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHH
Q 009516 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGA 324 (533)
Q Consensus 245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i 324 (533)
+|+|++|+|+|++ +.+..|+.| +|++|+||||+.+|+.|++.+++++|| +++|||||||+||++|||+|.|++.+
T Consensus 174 lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkp---v~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 174 LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTP---VTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCC---EEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCc---eEEecCCCCceEECCCCCHHHHHHHH
Confidence 9999999999954 455678888 899999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeC
Q 009516 325 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404 (533)
Q Consensus 325 ~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 404 (533)
++++|.|+||.|++++|+|||++++|+|+++|+++++++ +|+|.++++++||++++.+++++.+++ +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 699999999999999999999999998 69999999
Q ss_pred CcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeE
Q 009516 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 484 (533)
Q Consensus 405 g~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~ 484 (533)
|... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~ 401 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGG 401 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 9875 357999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 485 VGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 485 V~iN~~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 402 V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 402 VAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred EEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 99999863 4678999999999999999999999999999998864
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-95 Score=783.44 Aligned_cols=453 Identities=25% Similarity=0.323 Sum_probs=415.4
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEE-EEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIA-NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~-~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
...++||||+|+.+. . ++||+||++++ +++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 28 ~~~~~~I~G~~~~~~--~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (528)
T 3v4c_A 28 PKGKHLVAGEWLDGA--G---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARA 102 (528)
T ss_dssp CCCCEEETTEEECCS--S---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEecCC--C---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 346789999999853 2 99999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHH--hCccc----CCC--CCCceeEEEeeeceEEEEEcCCCcc
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV--YGEII----PAT--LPDRRLFVLKQPVGVAGAITPWNFP 203 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~--~~~~~----~~~--~~~~~~~~~~~P~GVv~~I~p~N~P 203 (533)
++|++++++|+|||+.+++.|+..+++.++||++.+++. .+... +.. .++...+++++|+|||++|+|||||
T Consensus 103 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 182 (528)
T 3v4c_A 103 EAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFP 182 (528)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSST
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcch
Confidence 999999999999999999999999999999999998872 22221 111 1234578899999999999999999
Q ss_pred hHHHH--HHHHHHhhcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeC
Q 009516 204 LAMIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 277 (533)
Q Consensus 204 ~~~~~--~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftG 277 (533)
+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.++++.|+.||+|++|+|||
T Consensus 183 ~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTG 262 (528)
T 3v4c_A 183 LAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTG 262 (528)
T ss_dssp TTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEES
T ss_pred HHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEEC
Confidence 99865 99999999999999999999999999998875 5689999999999998889999999999999999999
Q ss_pred CHHHHHHHHHHhhcCc--cccceeeecCCCCCcEEEccCC---CHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHH
Q 009516 278 STAVGKKLMAGAAGTV--KKVCRVSLELGGNAPCIVFDDA---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEK 351 (533)
Q Consensus 278 s~~~g~~i~~~~~~~~--k~~~~~~lElgG~~~~iV~~dA---d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~-i~d~ 351 (533)
|+.+|+.|++.+++++ || +++|||||||+||++|| |++.|++.+++++|.|+||.|+|++|+|||++ +||+
T Consensus 263 S~~~G~~i~~~aa~~~~~~p---v~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~ 339 (528)
T 3v4c_A 263 SLAGGRALFDLCAARPEPIP---FFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADR 339 (528)
T ss_dssp CHHHHHHHHHHHHHSSSCCC---EEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHH
T ss_pred ChHHHHHHHHHHhhccCCCc---eEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHH
Confidence 9999999999999988 77 99999999999999999 88999999999999999999999999999997 9999
Q ss_pred HHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCC---Cc
Q 009516 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---ML 428 (533)
Q Consensus 352 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~---~~ 428 (533)
|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+.+++++ |+
T Consensus 340 f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~ 407 (528)
T 3v4c_A 340 FTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADH 407 (528)
T ss_dssp HHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCG
T ss_pred HHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccCh
Confidence 999999999998754 67899998888887877764 489999999975 4799999999988887 89
Q ss_pred ccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC--CHHHHHHHHhhcc--eeEEEECCCCC---CCCCCCccC
Q 009516 429 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLI---STEVAPFGG 501 (533)
Q Consensus 429 ~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~--d~~~~~~~a~~l~--~G~V~iN~~~~---~~~~~PfGG 501 (533)
+++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+||||++.. ..+.+||||
T Consensus 408 i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG 487 (528)
T 3v4c_A 408 ALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGG 487 (528)
T ss_dssp GGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCC
T ss_pred hhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCC
Confidence 9999999999999999999999999999999999999999 8999999999998 99999999654 347899999
Q ss_pred -cCCCCCCCCC--hHHHHHhhheeeEE
Q 009516 502 -VKQSGLGREG--SKYGMDEFLEIKYV 525 (533)
Q Consensus 502 -~~~SG~G~~g--g~~~l~~~~~~k~v 525 (533)
+|.||+|+++ |++|+++||+.|++
T Consensus 488 ~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 488 PYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp TTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 9999999985 99999999999975
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-92 Score=762.62 Aligned_cols=443 Identities=20% Similarity=0.252 Sum_probs=408.0
Q ss_pred CCCCeEEeecCCCCCEE-EEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 009516 67 YDGKTLEVHNPATGEVI-ANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP 145 (533)
Q Consensus 67 ~~~~~~~v~~P~tg~~l-~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~ 145 (533)
.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||
T Consensus 4 ~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 83 (510)
T 1ez0_A 4 QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 83 (510)
T ss_dssp -CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 35788999999999999 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHH--HhCccc----CCCCC-C-ceeEEEeeeceEEEEEcCCCcchHHH--HHHHHHHh
Q 009516 146 LKEAVGEVDYGAKFIEFYAEEAKR--VYGEII----PATLP-D-RRLFVLKQPVGVAGAITPWNFPLAMI--TRKVGPAL 215 (533)
Q Consensus 146 ~~~a~~Ev~~~~~~l~~~a~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~GVv~~I~p~N~P~~~~--~~~l~~AL 215 (533)
+.+++.|+..+++.++||++.+++ ..+... +...+ + ...+++++|+|||++|+|||||+.+. .+++++||
T Consensus 84 ~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~AL 163 (510)
T 1ez0_A 84 EVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASAL 163 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHH
Confidence 999999999999999999999876 333322 11111 1 24678999999999999999999985 49999999
Q ss_pred hcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 216 ACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 216 aaGN~VVlKps~~tp~~~~~l~~ll----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 243 (510)
T 1ez0_A 164 AAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 243 (510)
T ss_dssp HHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc
Confidence 9999999999999999999999988 567999999999999777899999999999999999999999999999998
Q ss_pred Cc--cccceeeecCCCCCcEEEccCCCHH--HHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHhhcCccC
Q 009516 292 TV--KKVCRVSLELGGNAPCIVFDDADLN--VAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 292 ~~--k~~~~~~lElgG~~~~iV~~dAd~d--~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G 366 (533)
++ || +++|||||||+||++|||+| .|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.++++++++
T Consensus 244 ~l~~~p---v~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~- 319 (510)
T 1ez0_A 244 RPEPIP---FYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP- 319 (510)
T ss_dssp SSSCCC---EEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC-
T ss_pred cCCCcc---EEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC-
Confidence 85 88 99999999999999999999 99999999999999999999999999999 999999999999999875
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHH-HCCCeEEeCCcccCCCCceeecEEeccCCCC---CcccccccccceEEEE
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---MLVSREEVFGPVAPLL 442 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~---~~~~~eE~FGPv~~v~ 442 (533)
||++++.+.+++.+++++++ ++|+++++||. . |+|++|||+.+++++ |++++||+||||++|+
T Consensus 320 ---------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-~---g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~ 386 (510)
T 1ez0_A 320 ---------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-E---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIV 386 (510)
T ss_dssp ---------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-C---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEE
T ss_pred ---------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-C---CCEecCEEEEecCCccccCHHHcCCccCCeEEEE
Confidence 68899999999999999998 48999999997 2 799999999988777 9999999999999999
Q ss_pred eeCCHHHHHHHHHcCCCCcEEEEEcCCH--HHHHHHHhhc--ceeEEEECCCCC---CCCCCCccC-cCCCCCCCC--Ch
Q 009516 443 CFKTEEEAIHMANDTNAGLAAYIFTNNL--QRTWRVSEAL--EYGLVGVNEGLI---STEVAPFGG-VKQSGLGRE--GS 512 (533)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~a~v~s~d~--~~~~~~a~~l--~~G~V~iN~~~~---~~~~~PfGG-~~~SG~G~~--gg 512 (533)
+|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+||||++.. ..+.+|||| +|.||+|+. +|
T Consensus 387 ~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G 466 (510)
T 1ez0_A 387 VCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVG 466 (510)
T ss_dssp EESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSS
T ss_pred EeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCcc
Confidence 9999999999999999999999999987 7999999999 799999998764 346899999 799999865 89
Q ss_pred HHHHHhhheeeEEE
Q 009516 513 KYGMDEFLEIKYVC 526 (533)
Q Consensus 513 ~~~l~~~~~~k~v~ 526 (533)
++|+++|++.|++.
T Consensus 467 ~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 467 AEAIHRWLRPVAYQ 480 (510)
T ss_dssp GGGGGGGEEEEEEE
T ss_pred HHHHHHhheEEEEc
Confidence 99999999999764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-91 Score=793.88 Aligned_cols=434 Identities=26% Similarity=0.428 Sum_probs=410.5
Q ss_pred EeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHH
Q 009516 86 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165 (533)
Q Consensus 86 v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~ 165 (533)
++.++.+|++.|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++..|+..++++++||+.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCcc--cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHc
Q 009516 166 EAKRVYGEI--IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 243 (533)
Q Consensus 166 ~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~a 243 (533)
.+++..+.. .+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.||+++..+++++.++
T Consensus 624 ~a~~~~g~~~~~~~-~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eA 702 (1001)
T 3haz_A 624 QGRKLFGSETAMPG-PTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA 702 (1001)
T ss_dssp HHHHHHSSCEECCC-CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhcCccccccC-CCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHh
Confidence 998877653 222 23677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC---ccccceeeecCCCCCcEEEccCCCHHHH
Q 009516 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---VKKVCRVSLELGGNAPCIVFDDADLNVA 320 (533)
Q Consensus 244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~---~k~~~~~~lElgG~~~~iV~~dAd~d~a 320 (533)
|+|+|++|+|+|++.+ ++.|+.||+|++|+||||+.+|+.|++.++++ +|| +++|+|||||+||++|||+|.|
T Consensus 703 GlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~p---v~lElGGknp~IV~~dADld~A 778 (1001)
T 3haz_A 703 GIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVP---LIAETGGINAMIADATALPEQV 778 (1001)
T ss_dssp TCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCC---EEEECCCCEEEEECTTSCHHHH
T ss_pred CcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCce---EEeecCCcceEEEcCCCCHHHH
Confidence 9999999999998877 99999999999999999999999999998865 566 9999999999999999999999
Q ss_pred HHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCe
Q 009516 321 VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 400 (533)
Q Consensus 321 a~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~ 400 (533)
++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++..+.+++.++|++++.+| +
T Consensus 779 a~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~ 857 (1001)
T 3haz_A 779 ADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-R 857 (1001)
T ss_dssp HHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-E
T ss_pred HHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-e
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999888 8
Q ss_pred EEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCC--HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHh
Q 009516 401 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 478 (533)
Q Consensus 401 v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~ 478 (533)
+ +||..+ .+|+|++|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+++.++++
T Consensus 858 v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~ 933 (1001)
T 3haz_A 858 L-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIID 933 (1001)
T ss_dssp E-EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHH
T ss_pred E-eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHH
Confidence 8 888765 3589999999985 7889999999999999999996 79999999999999999999999999999999
Q ss_pred hcceeEEEECCCCCCC--CCCCccCcCCCCCC-CCChHHHHHhhheeeEEEEec
Q 009516 479 ALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 479 ~l~~G~V~iN~~~~~~--~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++++|+||||++.... +.+||||+|.||+| ++||++++++|++.|+|+++.
T Consensus 934 ~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 934 RVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred hCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999999999987643 57899999999999 569999999999999999864
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-85 Score=695.82 Aligned_cols=405 Identities=16% Similarity=0.140 Sum_probs=339.9
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CCC
Q 009516 73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQ-------GKP 145 (533)
Q Consensus 73 ~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~-------Gk~ 145 (533)
-++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred HH----HHhHHHHHHHHHHHHHHHHHHHHhCcccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCC
Q 009516 146 LK----EAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 219 (533)
Q Consensus 146 ~~----~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN 219 (533)
+. ++..|+..+++.++||++.+++..+...+.. .++...++.++|+|||++|+||| |...+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 98 4678999999999999998877766543321 13456789999999999999888 88777 89999999999
Q ss_pred EEEEecCCCchHHHHHHHHHHHHc----CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccc
Q 009516 220 TVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (533)
Q Consensus 220 ~VVlKps~~tp~~~~~l~~ll~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~ 295 (533)
+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.++ +||
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~p 243 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIP 243 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSC
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCC
Confidence 999999999999999999999999 9 9999999999 6788999999999999999999999999999887 788
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCccc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 375 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 375 (533)
+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++||
T Consensus 244 ---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------- 294 (463)
T 2h5g_A 244 ---VMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------- 294 (463)
T ss_dssp ---BCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------
T ss_pred ---EEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------
Confidence 999999999999999999999999999999999 999999999999999998
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHH
Q 009516 376 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 455 (533)
Q Consensus 376 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n 455 (533)
||+ +++++++++++|++++.|+... ..++|+ +++|++++||+||||++|++|+|+||||+++|
T Consensus 295 ~p~--------~~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN 357 (463)
T 2h5g_A 295 TPL--------FDQIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIH 357 (463)
T ss_dssp SHH--------HHHHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHH
T ss_pred hHH--------HHHHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHH
Confidence 343 2345788889999998555422 223443 57899999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCC--CC--ChHHHHHhhheeeEEEEec
Q 009516 456 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--RE--GSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 456 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G--~~--gg~~~l~~~~~~k~v~~~~ 529 (533)
+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|+||+| ++ +|++|+++||+.|+|+++.
T Consensus 358 ~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 358 KYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred cCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 99999999999999999999999999999999998777788999999999999 75 9999999999999998763
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-82 Score=675.60 Aligned_cols=394 Identities=19% Similarity=0.180 Sum_probs=327.2
Q ss_pred HHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHh-HHHHH-HHHHHHHHHHH
Q 009516 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV-GEVDY-GAKFIEFYAEE 166 (533)
Q Consensus 93 dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~Ev~~-~~~~l~~~a~~ 166 (533)
.+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .+++ .|+.. ++..++|+++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999 8885 89998 99999999998
Q ss_pred HHHHh------CcccCCC-C-CCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHH
Q 009516 167 AKRVY------GEIIPAT-L-PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 238 (533)
Q Consensus 167 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ 238 (533)
+++.. +...+.. . .+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 88765 4432311 1 2456789999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEE
Q 009516 239 LAL----Q----AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI 310 (533)
Q Consensus 239 ll~----~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~i 310 (533)
++. + +|+|+|++|+|+ ++.++++.|+.||+|++|+||||+.+|+.|++.+ +|| +++|||||||+|
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kp---v~lElGGk~p~i 245 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIP---VLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSC---BTTBCSCCEEEE
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCC---EEeecCCccceE
Confidence 995 8 999999999999 6668899999999999999999999999999876 677 999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc---CCCCCCCcccCcccCHHHHHHH
Q 009516 311 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKV 387 (533)
Q Consensus 311 V~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gpli~~~~~~~~ 387 (533)
|++|||+|.|++.+++++|.|+| .|++++|+|||+++ |+|+++|.++++++++ |||.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999987 87643
Q ss_pred HHH-HHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEE
Q 009516 388 ETF-VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 466 (533)
Q Consensus 388 ~~~-i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~ 466 (533)
.++ +++++ ++++||. | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 344 56554 4667774 4 789997 78899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEECCCCCCCCCCCcc-----CcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 467 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFG-----GVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 467 s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfG-----G~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+|.++++++++++++|+||||++....+..||| |+|.||+|++ |++++++|++.|+|+++
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~ 439 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRG 439 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEEC
Confidence 9999999999999999999999987777789999 9999999999 99999999999999876
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-81 Score=666.49 Aligned_cols=417 Identities=18% Similarity=0.248 Sum_probs=370.3
Q ss_pred EEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-HHHHHHHHHHHH
Q 009516 85 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFY 163 (533)
Q Consensus 85 ~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~ 163 (533)
+++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. +...+++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 3455678999999999999999999999999999999999999999999999999999999988764 344444444333
Q ss_pred HHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHH----HH
Q 009516 164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA----EL 239 (533)
Q Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~----~l 239 (533)
.... +..+. ++ ..++...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++ ++
T Consensus 85 ~~~~-~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 IKDM-KTIGM-LK-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HTTC-CCSEE-EE-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhcc-cccce-ec-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 2211 11121 11 123567889999999999999999999999999999999999999999999999998765 45
Q ss_pred HHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCC-CCCcEEEccCCCHH
Q 009516 240 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELG-GNAPCIVFDDADLN 318 (533)
Q Consensus 240 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElg-G~~~~iV~~dAd~d 318 (533)
+.++|+|+|++|+|++++.+.++.|+.||+|++|+||||+.+ ++.+++++|| + +|+| ||+|+||++|||++
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kp---v-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTP---A-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSC---E-EEBCCCCCEEEECTTSCHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCc---E-EeeCCCCCeEEECCCCCHH
Confidence 688999999999999987899999999999999999999984 5666778888 8 7888 99999999999999
Q ss_pred HHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHh-------hcCccCCCC-CCCcccCcccCHHHHHHHHHH
Q 009516 319 VAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV-------KNLKVGDGF-GEGVVQGPLINKAALEKVETF 390 (533)
Q Consensus 319 ~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~~G~p~-~~~~~~Gpli~~~~~~~~~~~ 390 (533)
.|++.+++++|+|+||.|++++|||||+++||+|+++|+++. +++++|+|. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986 467889998 789999999999999999999
Q ss_pred HHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH----HHHHcCCCCcEEEEE
Q 009516 391 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI----HMANDTNAGLAAYIF 466 (533)
Q Consensus 391 i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai----~~~n~~~~gL~a~v~ 466 (533)
++.++.+|+++++||.. ++++++++. ||+||||++|++|+|+|||| +++|+++|||+++||
T Consensus 314 ~~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~ 378 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIH 378 (464)
T ss_dssp TTCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred hhhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 99888899999999853 456788765 89999999999999999997 799999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEECCCCC---------CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 467 TNNLQRTWRVSEALEYGLVGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 467 s~d~~~~~~~a~~l~~G~V~iN~~~~---------~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+|.++++++++++++|+||||++.. ..+.+|||| +.+|.|.++|..++++|++.|+|..+
T Consensus 379 t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 379 SEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp CSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999999864 467899998 78899999999999999999999764
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-80 Score=652.25 Aligned_cols=387 Identities=20% Similarity=0.220 Sum_probs=345.6
Q ss_pred HHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHh--------HHHHHHHH
Q 009516 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV--------GEVDYGAK 158 (533)
Q Consensus 91 ~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~Ev~~~~~ 158 (533)
-+++++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999986 5554 69999999
Q ss_pred HHHHHHHHHHHHhCcccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009516 159 FIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236 (533)
Q Consensus 159 ~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l 236 (533)
.++||++++++ .+...+.. ..+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999987654 44433321 12455788999999999999886 478999999999999999999999999999999
Q ss_pred HHHHH----HcCCCCCceecccCC-hhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEE
Q 009516 237 AELAL----QAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311 (533)
Q Consensus 237 ~~ll~----~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV 311 (533)
++++. ++|+|+|++|+|+|. ..+.++.|..||+|++|+||||+.+|+.|++.+ .|| +++|||||||+||
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~---v~lELGGk~p~iV 243 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVP---VLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSC---BCCCCCCCEEEEE
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCC---EEEecCCCceEEE
Confidence 99998 689999999999984 466888999999999999999999999999887 477 9999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHH
Q 009516 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391 (533)
Q Consensus 312 ~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 391 (533)
++|||+|.|++.+++++|.|+| .|+|++|+|||+++||+|+++|.+++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999988652
Q ss_pred HHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009516 392 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471 (533)
Q Consensus 392 ~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 471 (533)
+.||... .+ |+ ||| ++.++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 298 ----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 360 (427)
T 1o20_A 298 ----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYS 360 (427)
T ss_dssp ----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred ----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHH
Confidence 2233221 12 34 885 3467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCC----CCChHHHHHhhheeeEEEEec
Q 009516 472 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 472 ~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G----~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++.++++++++|+||||++....+.+||||.|+||+| +++|++++++||+.|+|+++.
T Consensus 361 ~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 361 NAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 9999999999999999997776778999999999997 468999999999999998864
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-79 Score=651.25 Aligned_cols=389 Identities=20% Similarity=0.203 Sum_probs=335.4
Q ss_pred HHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHh--------HHHHHHHH
Q 009516 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EAV--------GEVDYGAK 158 (533)
Q Consensus 91 ~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~Ev~~~~~ 158 (533)
.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||+.. +++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999853 554 37899999
Q ss_pred HHHHHHHHHHHHhCcccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009516 159 FIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236 (533)
Q Consensus 159 ~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l 236 (533)
.++|++++.+. .+...+.. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 105 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 99999987643 34333321 23567889999999999999998 8 58899999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCceecccCChh-hHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEE
Q 009516 237 AELA----LQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311 (533)
Q Consensus 237 ~~ll----~~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV 311 (533)
++++ .++|+|+|++|+|+|.+. ++++.|..||+|++|+||||+.+|+.+++.+ +|| +++|||||||+||
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~p---v~lELGGk~p~IV 255 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVP---MIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSC---BCCCCCCCCEEEE
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCC---EEEEcCCcCeEEE
Confidence 9997 799999999999998554 5788888999999999999999999998876 577 9999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc---CCCCCCCcccCcccCHHHHHHHH
Q 009516 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVE 388 (533)
Q Consensus 312 ~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gpli~~~~~~~~~ 388 (533)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 7653 13
Q ss_pred HHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 389 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 389 ~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
++++++. + | ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 374 (444)
T 4ghk_A 318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTE 374 (444)
T ss_dssp HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECS
T ss_pred HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 5555431 1 1 12 3467899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCC----CCChHHHHHhhheeeEEEEec
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G----~~gg~~~l~~~~~~k~v~~~~ 529 (533)
|.+++.++++++++|+|+||++....+..||||.|+||+| +++|++|+++||+.|+|+++.
T Consensus 375 d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 375 DHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp BHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999999998877788999999999998 689999999999999998863
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-77 Score=637.37 Aligned_cols=409 Identities=19% Similarity=0.248 Sum_probs=341.6
Q ss_pred EeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-HHHHHHHHH-HHH
Q 009516 86 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFI-EFY 163 (533)
Q Consensus 86 v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l-~~~ 163 (533)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.+ +||
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999986 777777776 454
Q ss_pred HHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH--
Q 009516 164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL-- 241 (533)
Q Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~-- 241 (533)
+. .+..+. ++ ..++...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.
T Consensus 81 ~~--~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--cccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 43 122221 11 1234567889999999999999999999999999999999999999999999999998888875
Q ss_pred --HcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHH
Q 009516 242 --QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNV 319 (533)
Q Consensus 242 --~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~ 319 (533)
++|+|+|++|+|++++.+.++.|+.||+|++|+||||+.++ +.+++++|| +++|+|||+|+||++|||++.
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp---~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKP---AIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSC---EEECC--CEEEEECTTSCHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCC---EEecCCCCCeEEEeCCCCHHH
Confidence 78999999999999888999999999999999999999854 456678888 999999999999999999999
Q ss_pred HHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCC
Q 009516 320 AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 399 (533)
Q Consensus 320 aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 399 (533)
|++.++.++|+|+||.|++++|+|||+++||+|+++|+++ .||++++++.+++.++++++...|+
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999999999999875 2999999999999999987666677
Q ss_pred eEEeCCcccC---CCCceeecEE-------eccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCC----CCcEEEE
Q 009516 400 KVLLGGRRHS---LGMTFYEPTV-------LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN----AGLAAYI 465 (533)
Q Consensus 400 ~v~~gg~~~~---~~~~~~~Ptv-------l~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~----~gL~a~v 465 (533)
++ +||.... ..|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++|
T Consensus 295 ~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i 372 (452)
T 3my7_A 295 KI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGL 372 (452)
T ss_dssp GG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred eE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEE
Confidence 76 4765421 2479999997 778999999875 89999999999999999999999985 9999999
Q ss_pred EcCCHHHHHH---HHhhcceeEEEECCCCCCCCCCCccCcCCC-----------CCCCCChH-----HHHHhhheeeEEE
Q 009516 466 FTNNLQRTWR---VSEALEYGLVGVNEGLISTEVAPFGGVKQS-----------GLGREGSK-----YGMDEFLEIKYVC 526 (533)
Q Consensus 466 ~s~d~~~~~~---~a~~l~~G~V~iN~~~~~~~~~PfGG~~~S-----------G~G~~gg~-----~~l~~~~~~k~v~ 526 (533)
||+|.+++++ ++.++++|+|+||++. ||||.+.. |.|..||- -+.+++.+.|+|.
T Consensus 373 ~t~d~~~a~~i~~~a~~l~~G~V~VN~~~------~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~ 446 (452)
T 3my7_A 373 YTNQDVNADRIRYFGDKMKTARILINIPT------THGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVA 446 (452)
T ss_dssp ESCTTTCHHHHHHHHHHCCCSEEEESCCC------C----------------------------CCCCCGGGGEEEEEEE
T ss_pred EcCCHHHHHHHHHHHHhCCEEEEEECCCC------CCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEE
Confidence 9999887777 9999999999999864 46655532 44455443 3556666777665
Q ss_pred Ee
Q 009516 527 LG 528 (533)
Q Consensus 527 ~~ 528 (533)
.+
T Consensus 447 ~~ 448 (452)
T 3my7_A 447 KR 448 (452)
T ss_dssp CC
T ss_pred ee
Confidence 43
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.075 Score=54.10 Aligned_cols=258 Identities=17% Similarity=0.195 Sum_probs=151.5
Q ss_pred CCCceeEEEeeeceEEEEEcCC---CcchHHHHHHHHHHhhcCCE--EEEecCCCchHHHHHHHHHHHHcCCCCCceecc
Q 009516 179 LPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCT--VVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253 (533)
Q Consensus 179 ~~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~--VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v 253 (533)
.+|.....++.|+--|++-.|. .||... +....||-.+|+. |+.-|++.. .....+.-..+.+|+.. +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EE
Confidence 4577788899999999999994 366544 4457899999996 333444322 12223344457778764 22
Q ss_pred cCChhhHHhHHhc----CCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeec-CCCCCcEEEc--cCCCHHHHHHHHHH
Q 009516 254 MGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLE-LGGNAPCIVF--DDADLNVAVNGALA 326 (533)
Q Consensus 254 ~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lE-lgG~~~~iV~--~dAd~d~aa~~i~~ 326 (533)
.-.|.+.-.+|.- -|.||+|+=.|..-+...=..-.. . +-.. .-|.+=++|. ++||.++.+.+++.
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g-~------VgIDm~AGPSEilViAD~~a~p~~vAaDLls 264 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG-Q------VGIDMVAGPSEILVISDGRTDPDWIAMDLFS 264 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT-T------BEECCCCCCCEEEEEECSCSCHHHHHHHHHH
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC-C------cCcccccccceEEEEeCCCCCHHHHHHHHHH
Confidence 2224443344443 578999999998887543322222 1 2222 2355554444 45899999999988
Q ss_pred HHhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeC
Q 009516 327 AKFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404 (533)
Q Consensus 327 ~~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 404 (533)
.+=.... .+.++|.. .+.++..+.+.+.++.+. .. +...+-++.
T Consensus 265 QAEHd~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l~---------------r~---~i~~~sl~~----------- 310 (423)
T 4gic_A 265 QAEHDED-----AQAILISPDAAHLEAVQASIERLLPGME---------------RA---EVIRTSLER----------- 310 (423)
T ss_dssp HHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHGGGCT---------------TH---HHHHHHHHH-----------
T ss_pred hhccCCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhCc---------------cH---HHHHHHHhc-----------
Confidence 8765432 33455644 444555555555555442 11 111111110
Q ss_pred CcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ee
Q 009516 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YG 483 (533)
Q Consensus 405 g~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G 483 (533)
+| .++.++|.+|+++++|..-.= -.-|.++|.. .+..+++ +|
T Consensus 311 ------------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAG 353 (423)
T 4gic_A 311 ------------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAG 353 (423)
T ss_dssp ------------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCS
T ss_pred ------------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEec
Confidence 11 245679999999999984222 4566788875 5777777 99
Q ss_pred EEEECCCCC---C------CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 484 LVGVNEGLI---S------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 484 ~V~iN~~~~---~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
.|++..++. + +..+|-+| ..|+.+..+.+.|+..-++
T Consensus 354 aIFlG~~tp~~~GDY~aG~NHvLPT~G-----~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 354 AIFMGRYTAEALGDYCAGPNHVLPTSG-----TARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp EEEEC----------------CCCCTT-----GGGTCCCCCGGGGEEEEEE
T ss_pred eeecCCCCchhhhhcCcCCCccCCCCC-----cccccCCCCHHHeeeeeeE
Confidence 999976543 1 23566555 4555555577888876544
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.18 Score=51.50 Aligned_cols=256 Identities=20% Similarity=0.246 Sum_probs=153.5
Q ss_pred CCceeEEEeeeceEEEEEcCC---CcchHHHHHHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHcCCCCCceeccc
Q 009516 180 PDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM 254 (533)
Q Consensus 180 ~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VVl--Kps~~tp~~~~~l~~ll~~aGlP~gvv~~v~ 254 (533)
+|.....++.|+--|++-.|. -||... +....||-.+|+.=|+ -|+.-.| .+.-..+.+|+.. ++. +
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~i~p----~iL~AA~l~Gv~e-Iy~-v- 184 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPPIAD----EILYAAQLCGVQD-VFN-V- 184 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTHHH-HHHHHHHHHHTCSEEEEEECSSCCH----HHHHHHHHTTCCE-EEE-C-
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchhHH-HHhhccHhhcCCCeEEEECCCCCCH----HHHHHHHHcCCCE-Eee-c-
Confidence 366667789999999999996 466544 4557899999986544 4442233 2334457788764 222 2
Q ss_pred CChhhHHhHHhc----CCCeeEEEeeCCHHHHHHHHHHhhcCccccceeee-cCCCCCcEEEc--cCCCHHHHHHHHHHH
Q 009516 255 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSL-ELGGNAPCIVF--DDADLNVAVNGALAA 327 (533)
Q Consensus 255 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~l-ElgG~~~~iV~--~dAd~d~aa~~i~~~ 327 (533)
| |.+.-.+|.- -|+||+|+=.|..-+...=..-.... .. +-. -.-|.+=++|. ++||.++.+.+++..
T Consensus 185 G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~-G~---VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQ 259 (434)
T 1kae_A 185 G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DG---AAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 259 (434)
T ss_dssp C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCT-TS---CEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhc-Cc---cccCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 3 4443334432 47899999888877643322211001 11 222 22355555544 458999999999888
Q ss_pred HhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCC
Q 009516 328 KFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405 (533)
Q Consensus 328 ~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg 405 (533)
+=...- .+.++|.. ...++..+.+.+.+..+. . . +.++.++
T Consensus 260 AEHd~~-----a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~ia~~sl---------- 302 (434)
T 1kae_A 260 AEHGPD-----SQVILLTPAADMARRVAEAVERQLAELP---------------R---A----ETARQAL---------- 302 (434)
T ss_dssp HTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHTTCT---------------T---H----HHHHHHH----------
T ss_pred hccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHH----------
Confidence 765432 33455544 444555555555554441 0 0 1112211
Q ss_pred cccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-eeE
Q 009516 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGL 484 (533)
Q Consensus 406 ~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~ 484 (533)
..- .|+.++|.||+++++|..-.= -.-|.++|.. .+..+++ +|.
T Consensus 303 ------------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGa 347 (434)
T 1kae_A 303 ------------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGS 347 (434)
T ss_dssp ------------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSE
T ss_pred ------------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccc
Confidence 112 356779999999999984332 4567788874 5677776 999
Q ss_pred EEECCCCC---------CCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 485 VGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 485 V~iN~~~~---------~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
|++..++. .+..+|-+|. .|+.|..+.+.|+..-++
T Consensus 348 IFlG~~tpe~~GDY~aG~NHvLPT~G~-----AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 348 VFLGDWSPESAGDYASGTNHVLPTYGY-----TATCSSLGLADFQKRMTV 392 (434)
T ss_dssp EEESTTCCHHHHHHTSSSCCCCCCTTG-----GGTCCCSCGGGGEEEEEE
T ss_pred hhcCCCCchhhcccccCCCcccCCCCc-----eeccCCCcHHhccceeeE
Confidence 99997654 2346776654 455555678888876554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 533 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-171 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-170 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-158 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-143 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-120 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-117 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 1e-104 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-101 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-60 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 4e-57 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-25 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 491 bits (1264), Expect = e-171
Identities = 190/485 (39%), Positives = 268/485 (55%), Gaps = 7/485 (1%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSA---FD 103
L + T+ I +W + GK V NPAT E + V ++ A+ +A F
Sbjct: 6 LTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQ 65
Query: 104 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEF 162
+ W + A+ER + L K DL+ + L + + GK + ++ K + +
Sbjct: 66 IGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRY 125
Query: 163 YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
A A ++ G IP + + +PVGV G I PWNFPL M K+GPAL+CG TVV
Sbjct: 126 CAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVV 184
Query: 223 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
VKP+E TPLTAL L +AG PPGVVN+V G P G A+ + V K+ FTGST VG
Sbjct: 185 VKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 244
Query: 283 KKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 342
K + A + K RVSLELGG +PCIVF DADL+ AV A F + GQ C+ A+R+
Sbjct: 245 KLIKEAAGKSNLK--RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRL 302
Query: 343 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 402
V+E IY++F + K +G+ GV QGP I+K EK+ +E +GAK+
Sbjct: 303 FVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLE 362
Query: 403 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 462
GG F +PTV S+V +M +++EE+FGPV ++ FK+ ++ I AN+T GL+
Sbjct: 363 CGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLS 422
Query: 463 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 522
A IFTN++ + VS AL+ G V VN + + PFGG K SG GRE +YG E+ E+
Sbjct: 423 AGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEV 482
Query: 523 KYVCL 527
K V +
Sbjct: 483 KTVTI 487
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 488 bits (1257), Expect = e-170
Identities = 185/485 (38%), Positives = 270/485 (55%), Gaps = 7/485 (1%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSA---FD 103
+ + Q I +W DA KT NP+TGEVI V+ ++ A+ +A F
Sbjct: 6 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 65
Query: 104 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEF 162
+ W ++ A+ R + L + DL+ + L L TL+ GKP + ++D K + +
Sbjct: 66 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 125
Query: 163 YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
YA A + +G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV
Sbjct: 126 YAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 184
Query: 223 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
+K +E TPLTAL A L +AG PPGVVN+V G P G A+ + V K+ FTGST +G
Sbjct: 185 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 244
Query: 283 KKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 342
+ + A + K RV+LELGG +P I+ DAD++ AV A A F N GQ +R
Sbjct: 245 RVIQVAAGSSNLK--RVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRT 302
Query: 343 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 402
VQE IY++F + K+ VG+ F QGP +++ +K+ ++ +GAK+L
Sbjct: 303 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 362
Query: 403 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 462
GG + F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLA
Sbjct: 363 CGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLA 422
Query: 463 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 522
A +FT +L + +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+
Sbjct: 423 AAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEV 482
Query: 523 KYVCL 527
K V +
Sbjct: 483 KTVTV 487
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 459 bits (1181), Expect = e-158
Identities = 185/482 (38%), Positives = 261/482 (54%), Gaps = 14/482 (2%)
Query: 59 IGGKWIDAYDGKTLE-VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
GG+ I + DG T E V PATG V+ + G +E A+ SA A+ WSK+ ERS
Sbjct: 24 WGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERS 83
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
+ + + ++ ++ + +L + GK + EA ++D + IE+YA A + G+ I
Sbjct: 84 RVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQL 143
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
+ ++P+GV I WN+P + K PALACG VV KPS TP+T + A
Sbjct: 144 P-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILA 202
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVC 297
E+ +AG+P G+VNVV G + G L P V K++FTGS GKK+M +A TVK
Sbjct: 203 EIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVK--- 258
Query: 298 RVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 357
V+LELGG +P ++F D +L AV GAL A F GQ C RV VQ I +F +
Sbjct: 259 HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVV 318
Query: 358 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----- 412
K K + VGD G LI+K L+KV FV A +GA+VL GG +
Sbjct: 319 KRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKN 378
Query: 413 -TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471
F P VL N + +M +EE+FGPV +L F TEEE + AN+T GLA+ +FT ++
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438
Query: 472 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGD 529
R RV+ LE G +N IS PFGG K SG GRE + +D + ++K V +GD
Sbjct: 439 RAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGD 498
Query: 530 MN 531
++
Sbjct: 499 VD 500
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 418 bits (1075), Expect = e-143
Identities = 170/476 (35%), Positives = 261/476 (54%), Gaps = 7/476 (1%)
Query: 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 112
++ + LI G+ + +G+ V+NPATG+V+ ++ ++ A+ +A AF W + T
Sbjct: 1 MQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTT 59
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV-DYGAKFIEFYAEEAKRVY 171
R++ L K D++ + + +L + GKPL A + F+A A+ +
Sbjct: 60 PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G L + + P+GV +I PWN+PL M K+ PALA G VV+KPSE TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
TAL AELA + P GVVN++ G +GD L P+VR ++ TGS A G+ +++ A
Sbjct: 180 TALKLAELA-KDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 238
Query: 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 351
++K R +ELGG AP IVFDDAD+ V G + N+GQ C A R+ Q+GIY+
Sbjct: 239 SIK---RTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 295
Query: 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSL 410
+ AV LK G E GPL + A LE+V VE+A + G KV+ GG +
Sbjct: 296 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 355
Query: 411 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470
+Y PT+L+ + + ++EVFGPV + F EE+ ++ AND+ GLA+ ++T ++
Sbjct: 356 NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDV 415
Query: 471 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526
R RVS L+YG VN + P GG K SG G++ S YG++++ +++V
Sbjct: 416 GRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 360 bits (924), Expect = e-120
Identities = 156/475 (32%), Positives = 243/475 (51%), Gaps = 17/475 (3%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
+ G+W + ++++ PA+G + +V M +E +SA A +W L+ ER+
Sbjct: 7 YVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERA 64
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI--- 174
L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE+
Sbjct: 65 AYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEG 124
Query: 175 --IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232
A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP ++
Sbjct: 125 GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSIS 184
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
L AE +AG+P GV N + G +IGD ++ V I FTGST +G+++ A
Sbjct: 185 GLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAGMR 244
Query: 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 352
+ LELGG IV +DADL + +A F SGQ C RVLV E + ++
Sbjct: 245 -----PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 299
Query: 353 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 412
+ + V L +G+ + PLI+ + + VE + DA KGA L +R
Sbjct: 300 VEKIREKVLALTIGNPE-DDADITPLIDTKSADYVEGLINDANDKGATALTEIKREG--- 355
Query: 413 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 472
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+ R
Sbjct: 356 NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPR 415
Query: 473 TWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526
+ ++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 416 AFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 352 bits (904), Expect = e-117
Identities = 153/510 (30%), Positives = 240/510 (47%), Gaps = 15/510 (2%)
Query: 25 MQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNP-ATGEVI 83
++++ +R+ M+ R+R+ IGG+W+D + + NP A EV+
Sbjct: 11 IETFQTEEARR---AMREALRRVREEFGRHYPLYIGGEWVDT--KERMVSLNPSAPSEVV 65
Query: 84 ANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG 143
+ G E + A+ +A+ AF +W +RS+ L K L+ K EL + E G
Sbjct: 66 GTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVG 125
Query: 144 KPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EIIPATLPDRRLFVLKQPVGVAGAITPWNF 202
K EA +V FIE+YA A R + P P+G I PWNF
Sbjct: 126 KNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNF 185
Query: 203 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGD 262
P+A+ T + +A G TV+ KP+E + E+ +AG PPGVVN + G ++G
Sbjct: 186 PVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGA 245
Query: 263 ALLTSPQVRKITFTGSTAVGKKLMAGAAGTV---KKVCRVSLELGGNAPCIVFDDADLNV 319
L+ P++R I FTGS VG K+ A R +E GG IV + AD ++
Sbjct: 246 YLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDL 305
Query: 320 AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI 379
A G + + + GQ C A+R+++ +G YE + K + L VG E GP++
Sbjct: 306 AAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVV 364
Query: 380 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVA 439
+ KV +++E ++G VL GG+R F PTV + V + +++EE+FGPV
Sbjct: 365 SAEQERKVLSYIEIGKNEGQLVL-GGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVL 423
Query: 440 PLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--A 497
++ K EA+ +ANDT GL +++ + G + N + V
Sbjct: 424 SVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQ 483
Query: 498 PFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 526
PFGG K SG + G+ + FLE+K V
Sbjct: 484 PFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 320 bits (821), Expect = e-104
Identities = 142/485 (29%), Positives = 232/485 (47%), Gaps = 15/485 (3%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SW 108
G+ + G+W + G+ +EV +P IA V +E + + F S
Sbjct: 12 GGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSA 69
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+ ER LRK D++ + + +++ + GKP AVGEV + + K
Sbjct: 70 RDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLK 129
Query: 169 RVYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 224
++ G+ IP + V ++P+GV AITP+N+PL K+ + G VVVK
Sbjct: 130 KIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVK 189
Query: 225 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 284
PS PL A A + L AG P ++ + ++ +V ++FTGST VG++
Sbjct: 190 PSISDPLPAAMAVKALLDAG-FPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGER 248
Query: 285 LMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 344
++ V + +ELGG P IV +DADL++A + + +GQ C VL
Sbjct: 249 VVKVGG-----VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLA 303
Query: 345 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404
+ +Y K + +K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL G
Sbjct: 304 ERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAG 363
Query: 405 GRRHSLGMTFYEP-TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 463
GRR ++ +M++ + EVF PVA + K ++AI +AN GL A
Sbjct: 364 GRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDA 423
Query: 464 YIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEI 522
+F ++ + R LE G + +N+ PFGG K+SG+ REG Y ++
Sbjct: 424 AVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAY 483
Query: 523 KYVCL 527
K +
Sbjct: 484 KTIVF 488
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 311 bits (797), Expect = e-101
Identities = 116/438 (26%), Positives = 195/438 (44%), Gaps = 19/438 (4%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVD 154
D + A +AFNS + R + L ++ + + + + + GK + EV
Sbjct: 4 DTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVA 63
Query: 155 YGAKFIEFYAEEAKRVYGEII---PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211
+ + ++ +E + L++ +P+GV I WN+P + + +
Sbjct: 64 HVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPM 123
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 271
A+A G V++KPSE + A A ++ L +
Sbjct: 124 VGAVAAGNAVILKPSEVSGHMADLLAT---LIPQYMDQNLYLVVKGGVPETTELLKERFD 180
Query: 272 KITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 331
I +TGSTAVGK +MA AA + V+LELGG +PC V D DL+VA KF N
Sbjct: 181 HIMYTGSTAVGKIVMAAAAKHLT---PVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMN 237
Query: 332 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391
SGQTCV + +L I + + K++K+ G+ + G +IN ++V+ +
Sbjct: 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLI 296
Query: 392 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451
++ + + G + PT+L +V + V +EE+FGPV P++C ++ EEAI
Sbjct: 297 DN------QKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAI 350
Query: 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--APFGGVKQSGLGR 509
N LA Y+F+NN + ++ G V N+ ++ V PFGGV SG+G
Sbjct: 351 QFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGA 410
Query: 510 EGSKYGMDEFLEIKYVCL 527
K + F + +
Sbjct: 411 YHGKKSFETFSHRRSCLV 428
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 204 bits (519), Expect = 4e-60
Identities = 81/479 (16%), Positives = 152/479 (31%), Gaps = 37/479 (7%)
Query: 69 GKTLEVHNPATGEVIAN-VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLL 127
N TGE + E A ++A + +L ++R+ LR L
Sbjct: 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASEL 61
Query: 128 MAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP--------ATL 179
A +++ LE P GE+ A + +A+ A L
Sbjct: 62 EARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPL 121
Query: 180 PDRRLFVLKQPVGVAGAITPWNFPL--AMITRKVGPALACGCTVVVKPSEFTPLT----A 233
P + + +G NFPL + ALA GC V+VK P T A
Sbjct: 122 PKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVA 181
Query: 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
+ Q +P + ++ GN +G AL++ P+++ + FTGS G+ L A
Sbjct: 182 ECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241
Query: 294 KKVCRVSLELGGNAPCIV-FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 352
+ + N I + +A+ GQ C V +
Sbjct: 242 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA 301
Query: 353 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 412
++++ + ++ ++ + ++ S + S +
Sbjct: 302 FIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS---------QAESPCV 352
Query: 413 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NL 470
S + EE+FGP + ++ + + + ++ L A I +
Sbjct: 353 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDY 412
Query: 471 QRTWRVSEALEY--GLVGVNEGLISTEV-------APFGGVKQSGLGREGSKYGMDEFL 520
+ ++ LE G + N EV P+ S + +L
Sbjct: 413 PQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIHRWL 470
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 194 bits (492), Expect = 4e-57
Identities = 67/455 (14%), Positives = 129/455 (28%), Gaps = 65/455 (14%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
E + +A++ T E++K ++K + L ++E+ + ++ K + V E
Sbjct: 2 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 61
Query: 153 ------------VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW 200
+D K E V I D + +
Sbjct: 62 SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIG-PIGIIY 120
Query: 201 NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP-D 259
+ AL G T++++ + A +A + +
Sbjct: 121 ESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENT 180
Query: 260 IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF-DDADLN 318
+L ++R+ G L+ + LE G I + ADL
Sbjct: 181 DRSLVLEMIRLREYLSLVIPRGGYGLI---SFVRDNATVPVLETGVGNCHIFVDESADLK 237
Query: 319 VAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 378
AV + AK + G ++ ++ I ++F + ++ V E +
Sbjct: 238 KAVPVIINAKTQRPGTCNAAEKLLVHEK-IAKEFLPVIVEELRKHGVEVRGCEKTREIVP 296
Query: 379 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPV 438
A E E +
Sbjct: 297 DVVPATEDDW------------------------------------------PTEYLDLI 314
Query: 439 APLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAP 498
+ K +EAI + G + I T N + ++ V VN T+
Sbjct: 315 IAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQ 374
Query: 499 FGGVKQSGLGREGS----KYGMDEFLEIKYVCLGD 529
FG + G+ + G+ E K+V LG+
Sbjct: 375 FGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 106 bits (266), Expect = 2e-25
Identities = 77/465 (16%), Positives = 136/465 (29%), Gaps = 65/465 (13%)
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ--LITLEQGKPLKEA 149
++ +A A N ++ RS L K +D L A+ + + I L K A
Sbjct: 3 SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA 62
Query: 150 VGEVD----YGAKFIEFYAEEAKRVY------GEIIPATLPDRRLFVLKQPVGVAGAITP 199
+ + E + K V G++ A D L + + V +
Sbjct: 63 DSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI 122
Query: 200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL-------ALQAGIPPGVVNV 252
+ +I ++ G ++K + + T A++ P
Sbjct: 123 FESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQ 182
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVF 312
++ D+ D L + + GS A+ +K+ V G +
Sbjct: 183 LIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK------IPVLGHADGICSIYLD 236
Query: 313 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372
+DADL A +L AK + I KF+ + G
Sbjct: 237 EDADLIKAKRISLDAKTNYPAGCNAMETLL-----INPKFSKWWEVLENLTLEGG----- 286
Query: 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSRE 432
V +K K + + LG + E +
Sbjct: 287 ------------------VTIHATKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDFDK 328
Query: 433 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 492
E + E AI N ++ I T N + + ++ V N
Sbjct: 329 EFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNA--- 385
Query: 493 STEVA---PFG-----GVKQSGLGREGSKYGMDEFLEIKYVCLGD 529
ST A +G G+ S + G G+D + +Y GD
Sbjct: 386 STRFADGFRYGFGAEVGISTSKIHARG-PVGLDGLVSYQYQIRGD 429
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 533 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.97 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=2.6e-107 Score=875.10 Aligned_cols=477 Identities=40% Similarity=0.635 Sum_probs=454.9
Q ss_pred ccCCccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---HhccCCHHHHHHHHHHHHH
Q 009516 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYD 125 (533)
Q Consensus 49 ~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~ 125 (533)
+..+-..+.||||+|+.+.++++++++||+||+++++++.++.+|++.|+++|++||+ .|+.++.++|.++|+++++
T Consensus 8 ~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~ 87 (494)
T d1bxsa_ 8 NLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLAD 87 (494)
T ss_dssp SCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHH
T ss_pred CCCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHH
Confidence 3344345789999999988899999999999999999999999999999999999996 6999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcch
Q 009516 126 LLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPL 204 (533)
Q Consensus 126 ~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~ 204 (533)
.|++++++|++++++|+|||..++. .|+..++++++|++.+.++..+...+.. .+...++.++|+|||++|+|||||+
T Consensus 88 ~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~ 166 (494)
T d1bxsa_ 88 LIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPL 166 (494)
T ss_dssp HHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCS-SSEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCC-CCceeEEEEccEEEEEEEeCccchh
Confidence 9999999999999999999999865 6899999999999999988777766543 3667889999999999999999999
Q ss_pred HHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHH
Q 009516 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 284 (533)
Q Consensus 205 ~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~ 284 (533)
..+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.
T Consensus 167 ~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~ 246 (494)
T d1bxsa_ 167 LMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL 246 (494)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHhhc-CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcC
Q 009516 285 LMAGAAG-TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 363 (533)
Q Consensus 285 i~~~~~~-~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 363 (533)
|++.++. ++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++
T Consensus 247 i~~~aa~~~~~~---~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~ 323 (494)
T d1bxsa_ 247 IKEAAGKSNLKR---VSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 323 (494)
T ss_dssp HHHHHHHTTCCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhcccCCCe---EEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhhe
Confidence 9998875 6888 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEe
Q 009516 364 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 443 (533)
Q Consensus 364 ~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~ 443 (533)
++|+|.++++++||++++.+++++.+++++|+++|+++++||......|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 ~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~ 403 (494)
T d1bxsa_ 324 VLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMK 403 (494)
T ss_dssp CBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred eeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEE
Confidence 99999999999999999999999999999999999999999987656689999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheee
Q 009516 444 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523 (533)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k 523 (533)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|
T Consensus 404 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k 483 (494)
T d1bxsa_ 404 FKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVK 483 (494)
T ss_dssp ECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred ECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceE
Confidence 99999999999999999999999999999999999999999999998877789999999999999999999999999999
Q ss_pred EEEEec
Q 009516 524 YVCLGD 529 (533)
Q Consensus 524 ~v~~~~ 529 (533)
+|+++.
T Consensus 484 ~i~~~~ 489 (494)
T d1bxsa_ 484 TVTIKI 489 (494)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999875
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=1.1e-106 Score=869.78 Aligned_cols=477 Identities=39% Similarity=0.615 Sum_probs=455.8
Q ss_pred hccCCccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---HhccCCHHHHHHHHHHHH
Q 009516 48 RDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWY 124 (533)
Q Consensus 48 ~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a 124 (533)
..+.+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+++.+|+++|++++
T Consensus 7 ~~p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a 86 (494)
T d1o04a_ 7 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLA 86 (494)
T ss_dssp SSCCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHH
T ss_pred CCCccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHH
Confidence 34456677899999999988899999999999999999999999999999999999985 699999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcc
Q 009516 125 DLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 203 (533)
Q Consensus 125 ~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P 203 (533)
+.|++++++|++++++|+|||..++. .|+..+++.++||++++.+..+...+.. .+...+++++|+|||++|+|||||
T Consensus 87 ~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P 165 (494)
T d1o04a_ 87 DLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFP 165 (494)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCS-SSEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccC-CCceeEEEEecccEEEEECCcccH
Confidence 99999999999999999999999985 6999999999999999988877766543 356788999999999999999999
Q ss_pred hHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHH
Q 009516 204 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283 (533)
Q Consensus 204 ~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 283 (533)
+..+++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|.||||+.+|+
T Consensus 166 ~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~ 245 (494)
T d1o04a_ 166 LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 245 (494)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHhh-cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc
Q 009516 284 KLMAGAA-GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 362 (533)
Q Consensus 284 ~i~~~~~-~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~ 362 (533)
.|++.++ +++|| +++|||||||+||++|||+|.|++.+++++|.|+||+|++++|+|||++++|+|+++|.+++++
T Consensus 246 ~i~~~aa~~~~~~---~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~ 322 (494)
T d1o04a_ 246 VIQVAAGSSNLKR---VTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKS 322 (494)
T ss_dssp HHHHHHHHTTCCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCCe---EEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhh
Confidence 9998875 67888 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEE
Q 009516 363 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 442 (533)
Q Consensus 363 ~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~ 442 (533)
+++|+|.++++++||++++.+++++.+++++|+++|+++++||......|+|++|||+.++++++++++||+||||++|+
T Consensus 323 ~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~ 402 (494)
T d1o04a_ 323 RVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQIL 402 (494)
T ss_dssp CCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred eeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEE
Confidence 99999999999999999999999999999999999999999998766668999999999999999999999999999999
Q ss_pred eeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhhee
Q 009516 443 CFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 522 (533)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~ 522 (533)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++||+.
T Consensus 403 ~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~ 482 (494)
T d1o04a_ 403 KFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEV 482 (494)
T ss_dssp EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEE
T ss_pred EeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCe
Confidence 99999999999999999999999999999999999999999999999887778899999999999999999999999999
Q ss_pred eEEEEe
Q 009516 523 KYVCLG 528 (533)
Q Consensus 523 k~v~~~ 528 (533)
|+|+++
T Consensus 483 k~v~~~ 488 (494)
T d1o04a_ 483 KTVTVK 488 (494)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999986
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.7e-105 Score=861.27 Aligned_cols=470 Identities=39% Similarity=0.619 Sum_probs=450.4
Q ss_pred ccceecCEEeeCCCCCeE-EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKTL-EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~-~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..+||||+|+.+.+++++ +++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 20 ~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~ee 99 (503)
T d1a4sa_ 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 457999999998777776 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.++..|+..+++.++|++.+.++..+...+.. .+...++.++|+|||++|+|||||+...++++++
T Consensus 100 la~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ 178 (503)
T d1a4sa_ 100 IAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178 (503)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcchhhhhhhhhhhhcccccccccccccccccccC-CCcccccccccceeeecccCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999887766544332 3667899999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 179 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 257 (503)
T d1a4sa_ 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257 (503)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 999999999999999999999999999999999999999999 5789999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|++++.+.++++++|+|.++.+
T Consensus 258 ~~---~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~ 334 (503)
T d1a4sa_ 258 KH---VTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTET 334 (503)
T ss_dssp CE---EEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred Cc---EEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeecccccccc
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC------CCCceeecEEeccCCCCCcccccccccceEEEEeeCCH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 447 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~ 447 (533)
++||++++.+++++++++++++++||++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 ~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 414 (503)
T d1a4sa_ 335 RMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTE 414 (503)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCH
Confidence 999999999999999999999999999999997532 35799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 448 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
||||+++|+++|||++||||+|.+++.++++++++|+||||++....+.+||||+|.||+||++|++++++||+.|+|++
T Consensus 415 ~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 494 (503)
T d1a4sa_ 415 EEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494 (503)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCeEEEEE
Confidence 99999999999999999999999999999999999999999988878899999999999999999999999999999998
Q ss_pred ec
Q 009516 528 GD 529 (533)
Q Consensus 528 ~~ 529 (533)
+.
T Consensus 495 ~~ 496 (503)
T d1a4sa_ 495 EM 496 (503)
T ss_dssp CC
T ss_pred cC
Confidence 73
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-104 Score=850.13 Aligned_cols=470 Identities=36% Similarity=0.615 Sum_probs=440.5
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
+.++||||+|+.+ ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~e 80 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQV 80 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Confidence 5678999999976 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||+.++.. ++..+..+++|++.......+...+...++...+++++|+|||++|+|||||+.+.+++++
T Consensus 81 la~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a 160 (474)
T d1wnda_ 81 FAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA 160 (474)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHH
Confidence 999999999999999976 5566666667766655443333333344577889999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..++++++++ +|+|++|+|+|++.++++.|++||+|++|.||||+++|+.|++.++++
T Consensus 161 ~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~ 239 (474)
T d1wnda_ 161 PALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASS 239 (474)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcC
Confidence 9999999999999999999999999998764 999999999998889999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|+|.+++
T Consensus 240 ~k~---~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~ 316 (474)
T d1wnda_ 240 IKR---THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 316 (474)
T ss_dssp TCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred CCe---EEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCe-EEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAK-VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~-v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
+++||+++..+.+++.+++++++.+|+. ++.|+...+..|+|++|||+.++++++++++||+||||++|++|+|+||||
T Consensus 317 ~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai 396 (474)
T d1wnda_ 317 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 396 (474)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred ceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHH
Confidence 9999999999999999999999999985 555655544568999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 397 ~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 397 NWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence 99999999999999999999999999999999999999887788999999999999999999999999999999985
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=8.7e-101 Score=828.04 Aligned_cols=468 Identities=32% Similarity=0.506 Sum_probs=438.4
Q ss_pred cccceecCEEeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
..++||||+|+.+ +++++++||. ||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|+++++
T Consensus 37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ 114 (516)
T d1uzba_ 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999985 5789999995 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCccc-CCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.+++.|+..++++++||++.+.+..+... ....++...+.+++|+|||++|+|||||+.++++++
T Consensus 115 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~ 194 (516)
T d1uzba_ 115 ELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMI 194 (516)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccccccc
Confidence 9999999999999999999999999999999999887765432 223346677889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh-
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 290 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~- 290 (533)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|++||+|++|.||||+.+|+.|++.++
T Consensus 195 ~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~ 274 (516)
T d1uzba_ 195 VGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR 274 (516)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTS
T ss_pred cchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988899999999999999999999999999999887
Q ss_pred -----cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc
Q 009516 291 -----GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 365 (533)
Q Consensus 291 -----~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 365 (533)
.++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++
T Consensus 275 ~~~~~~~~k~---v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~ 351 (516)
T d1uzba_ 275 LAPGQTWFKR---AYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp CCTTCCSCCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred cccchhhhhh---heeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhccc
Confidence 56777 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeC
Q 009516 366 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 445 (533)
Q Consensus 366 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~ 445 (533)
| |.++++++||+++..+++++++++++|+++|+.+ +||...+..|+|++|||+.++++++++++||+||||++|++|+
T Consensus 352 g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 429 (516)
T d1uzba_ 352 G-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp S-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred C-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeC
Confidence 9 6688999999999999999999999999888765 5665554567999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCcCCCCCCCC-ChHHHHHhhhee
Q 009516 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGRE-GSKYGMDEFLEI 522 (533)
Q Consensus 446 ~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~--~~~~PfGG~~~SG~G~~-gg~~~l~~~~~~ 522 (533)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|++ ||.+++++||+.
T Consensus 430 d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~ 509 (516)
T d1uzba_ 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509 (516)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEE
T ss_pred CHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCe
Confidence 999999999999999999999999999999999999999999987653 45899999999999998 568999999999
Q ss_pred eEEEEe
Q 009516 523 KYVCLG 528 (533)
Q Consensus 523 k~v~~~ 528 (533)
|+|+.+
T Consensus 510 k~v~~r 515 (516)
T d1uzba_ 510 KAVAER 515 (516)
T ss_dssp EEEEEE
T ss_pred eeEEEc
Confidence 999865
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.7e-95 Score=784.37 Aligned_cols=469 Identities=30% Similarity=0.488 Sum_probs=434.5
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-HhccCCHHHHHHHHHHHHHHHHHh
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERSKGLRKWYDLLMAH 130 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~ 130 (533)
+...++||||+|+. ++++++++||.||+++++++.++.+|+++|+++|++|++ .|+.+|..+|+++|+++++.|+++
T Consensus 14 ~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~ 91 (499)
T d1ky8a_ 14 VPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERN 91 (499)
T ss_dssp EEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHh
Confidence 33478999999996 578999999999999999999999999999999988888 799999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCccc----CCCCCCceeEEEeeeceEEEEEcCCCcchHH
Q 009516 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII----PATLPDRRLFVLKQPVGVAGAITPWNFPLAM 206 (533)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 206 (533)
+++|++++++|+|||..+++.|+..+++.++|++...++..+... +....+...+++|+|+|||++|+|||||+.+
T Consensus 92 ~~~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~ 171 (499)
T d1ky8a_ 92 LDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 171 (499)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchh
Confidence 999999999999999999999999999999999998877655432 2223356788999999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHH
Q 009516 207 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286 (533)
Q Consensus 207 ~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 286 (533)
+++++++||++||+||+|||+.+|+++..+.+++.++|+|+++++++.+++ +.+..|+.|++++.+.||||+.+++.++
T Consensus 172 ~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~i~ 250 (499)
T d1ky8a_ 172 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 250 (499)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceEEe
Confidence 999999999999999999999999999999999999999999999999865 5678999999999999999999999999
Q ss_pred HHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccC
Q 009516 287 AGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 287 ~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 366 (533)
+.++ .+| +++|||||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|
T Consensus 251 ~~~~--~~~---~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G 325 (499)
T d1ky8a_ 251 KVGG--VKQ---YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG 325 (499)
T ss_dssp HHHC--SSE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred eccc--ccc---eEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccC
Confidence 8765 467 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceee---cEEeccCCCCCcccccccccceEEEEe
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE---PTVLSNVKSEMLVSREEVFGPVAPLLC 443 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~---Ptvl~~~~~~~~~~~eE~FGPv~~v~~ 443 (533)
+|.|+++++||+++..+++++++++++|+.+||+++.||.... ..++. +++...+.+||++++||+||||++|++
T Consensus 326 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~ 403 (499)
T d1ky8a_ 326 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVE 403 (499)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhccccCceEEEEE
Confidence 9999999999999999999999999999999999999998763 23333 333345668999999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhhee
Q 009516 444 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEI 522 (533)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~ 522 (533)
|+|.||+|+++|+++|||+++|||+|.++++++++++++|+|+||+.... .+.+||||+|+||+|+++|.+++++||+.
T Consensus 404 ~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 483 (499)
T d1ky8a_ 404 VKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAY 483 (499)
T ss_dssp ESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEE
T ss_pred cCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCE
Confidence 99999999999999999999999999999999999999999999997764 46899999999999999999999999999
Q ss_pred eEEEEecc
Q 009516 523 KYVCLGDM 530 (533)
Q Consensus 523 k~v~~~~~ 530 (533)
|+|+++.-
T Consensus 484 k~i~~~~~ 491 (499)
T d1ky8a_ 484 KTIVFNYK 491 (499)
T ss_dssp EEEEEECT
T ss_pred EEEEEcCC
Confidence 99999753
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1.1e-92 Score=759.14 Aligned_cols=464 Identities=34% Similarity=0.559 Sum_probs=435.4
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
++++||||+|+.+ +++++++||+||+++++++.++.+|+++|+++|++|++.|+.++.++|.++|+++++.|++++++
T Consensus 3 ~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~ 80 (474)
T d1euha_ 3 QYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 80 (474)
T ss_dssp BCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3589999999874 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCc-----ccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE-----IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~-----~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 208 (533)
|++++++|+|||..+++.|+...+.++++++......... ..+....+...+++++|+|||++|+|||||+..++
T Consensus 81 la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~ 160 (474)
T d1euha_ 81 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 160 (474)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhh
Confidence 9999999999999999999999999999999877554322 12222335667889999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|++++.++++.|+.||+|+.|.||||+.+++.+++.
T Consensus 161 ~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~ 240 (474)
T d1euha_ 161 SKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240 (474)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred hhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhh
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999988
Q ss_pred hhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCC
Q 009516 289 AAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 368 (533)
Q Consensus 289 ~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 368 (533)
++ .|| +++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++++++...++.|++
T Consensus 241 a~--~k~---~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~ 315 (474)
T d1euha_ 241 AG--MRP---IMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 315 (474)
T ss_dssp TT--TSC---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred cc--cce---EEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCc
Confidence 75 567 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHH
Q 009516 369 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448 (533)
Q Consensus 369 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ 448 (533)
.+.. +++|++.....+++...+..+...++..+.++.. .|+|++|||+..++++|++++||+||||++|++|+|+|
T Consensus 316 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~d 391 (474)
T d1euha_ 316 EDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 391 (474)
T ss_dssp GGTC-SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred cccc-ccccccchHHHHHHHHHHHhhhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHH
Confidence 8765 5799999999999999999999999988876654 37999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 449 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 449 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|||+++|+++|||+++|||+|.+++++++.++++|+|+||+++. ..+.+||||+|+||+|+++|++|+++||++|+|++
T Consensus 392 eai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 471 (474)
T d1euha_ 392 EAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 471 (474)
T ss_dssp HHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEEEE
Confidence 99999999999999999999999999999999999999999765 45679999999999999999999999999999998
Q ss_pred e
Q 009516 528 G 528 (533)
Q Consensus 528 ~ 528 (533)
+
T Consensus 472 ~ 472 (474)
T d1euha_ 472 D 472 (474)
T ss_dssp E
T ss_pred e
Confidence 6
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-86 Score=704.97 Aligned_cols=423 Identities=30% Similarity=0.461 Sum_probs=387.8
Q ss_pred HHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhC
Q 009516 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYG 172 (533)
Q Consensus 94 v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~ 172 (533)
+++||++|++||++|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++...+...
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 689999999999999999999999999999999999999999999999999999996 6999999999999988766543
Q ss_pred cc---cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCc
Q 009516 173 EI---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV 249 (533)
Q Consensus 173 ~~---~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gv 249 (533)
.. ......+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.+. +|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~ 160 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNL 160 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTT
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccccc
Confidence 31 122234567789999999999999999999999999999999999999999999999999999988764 99999
Q ss_pred eecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHh
Q 009516 250 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKF 329 (533)
Q Consensus 250 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f 329 (533)
++++.+.+.+. ..+. ++.++.|.||||+.+|+.|++.+++++|| +++|||||||+||++|||+|.|++.+++++|
T Consensus 161 ~~~~~~~~~~~-~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~~---~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 161 YLVVKGGVPET-TELL-KERFDHIMYTGSTAVGKIVMAAAAKHLTP---VTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp EEECCCSHHHH-HHHT-TSCCSEEEEESCHHHHHHHHHHHHTTTCC---EEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred cccccccchhh-hhhc-ccccCceEEECcHHHHHHHHHHHHhcCCc---EEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 99999866554 3444 66799999999999999999999999999 9999999999999999999999999999999
Q ss_pred hccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC
Q 009516 330 RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 409 (533)
Q Consensus 330 ~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 409 (533)
.|+||.|++++|+|||++++|+|+++|.+.++.+ +|+|.++++++||++++.+.+++..+++. ++...|+...
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~~- 308 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTWD- 308 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCEE-
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhcccceeec-
Confidence 9999999999999999999999999999999887 89999999999999999999999888764 4555555443
Q ss_pred CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECC
Q 009516 410 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 489 (533)
Q Consensus 410 ~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~ 489 (533)
.+++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++.++++|+|+||+
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~ 388 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTAND 388 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESS
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 490 GLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 490 ~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 389 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 430 (446)
T d1ad3a_ 389 VIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKS 430 (446)
T ss_dssp SSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECC
T ss_pred CccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEcc
Confidence 754 4578999999999999999999999999999999863
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=4.7e-83 Score=686.65 Aligned_cols=441 Identities=20% Similarity=0.267 Sum_probs=379.7
Q ss_pred CCeEEeecCCCCCEEE-EEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009516 69 GKTLEVHNPATGEVIA-NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (533)
Q Consensus 69 ~~~~~v~~P~tg~~l~-~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (533)
+++|+++||+|||.|+ +++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~ 81 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 81 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 5789999999999997 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhCccc--------CCCCCCceeEEEeeeceEEEEEcCCCcchHHHH--HHHHHHhhc
Q 009516 148 EAVGEVDYGAKFIEFYAEEAKRVYGEII--------PATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT--RKVGPALAC 217 (533)
Q Consensus 148 ~a~~Ev~~~~~~l~~~a~~~~~~~~~~~--------~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~--~~l~~ALaa 217 (533)
+++.|+..++++++||++..++..+... ....++...+.+++|+|||++|+|||||+.+.+ +++++||++
T Consensus 82 ~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaa 161 (504)
T d1ez0a_ 82 RLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAA 161 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHH
Confidence 9999999999999999998877543221 112234567789999999999999999997544 699999999
Q ss_pred CCEEEEecCCCchHHHHHHH----HHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 218 GCTVVVKPSEFTPLTALAAA----ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 218 GN~VVlKps~~tp~~~~~l~----~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||+||+|||+.+|.++..+. +++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|.+.+++++
T Consensus 162 GN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~ 241 (504)
T d1ez0a_ 162 GCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241 (504)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSS
T ss_pred hccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhccc
Confidence 99999999999999887665 44567799999999999988899999999999999999999999999999999988
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHH--HHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHhhcCccCCCCC
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAV--NGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa--~~i~~~~f~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p~~ 370 (533)
+| +++++|||||||+||++|||+++|+ +.++.++|.|+||.|++++|+||+++.+ +.|++.+.+.++.. +
T Consensus 242 ~~-~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~ 314 (504)
T d1ez0a_ 242 EP-IPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------S 314 (504)
T ss_dssp SC-CCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------C
T ss_pred cc-ccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc------c
Confidence 87 3456699999999999999999874 4789999999999999999999877655 46777777665532 4
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEec---cCCCCCcccccccccceEEEEeeCCH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS---NVKSEMLVSREEVFGPVAPLLCFKTE 447 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~---~~~~~~~~~~eE~FGPv~~v~~~~~~ 447 (533)
+++.+||+++..+.+++ ++.+...|+++..||... .+..|+++. .+..++++++||+||||++|++|+|+
T Consensus 315 ~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~ 387 (504)
T d1ez0a_ 315 PSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAES----PCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENV 387 (504)
T ss_dssp CBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCCT----TSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSH
T ss_pred cccccccchhhhhhhhh---hhhhhhhhhhcccccccc----cccCCccccccccccccchhhcccccCCeeeeeecCCH
Confidence 57889999998887765 566677899998887653 334444433 34457889999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcC--CHHHHHHHHhhcc--eeEEEECCCCCCC-------CCCCccCcCCCCCCCCChHHHH
Q 009516 448 EEAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLIST-------EVAPFGGVKQSGLGREGSKYGM 516 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~--d~~~~~~~a~~l~--~G~V~iN~~~~~~-------~~~PfGG~~~SG~G~~gg~~~l 516 (533)
||+|+++|+++|||+++|||+ |..++.+++++|+ +|+|+||+++.+. ...||||.|.||.| ++|.+++
T Consensus 388 ~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i 466 (504)
T d1ez0a_ 388 ADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAI 466 (504)
T ss_dssp HHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGG
T ss_pred HHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHH
Confidence 999999999999999999996 5568999999997 8999999865421 23589999999955 5788999
Q ss_pred HhhheeeE
Q 009516 517 DEFLEIKY 524 (533)
Q Consensus 517 ~~~~~~k~ 524 (533)
++|++..+
T Consensus 467 ~~f~r~v~ 474 (504)
T d1ez0a_ 467 HRWLRPVA 474 (504)
T ss_dssp GGGEEEEE
T ss_pred HHHhchhh
Confidence 99987644
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.6e-67 Score=553.92 Aligned_cols=388 Identities=19% Similarity=0.153 Sum_probs=312.0
Q ss_pred HHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHH------------HHHHHHH
Q 009516 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE------------VDYGAKF 159 (533)
Q Consensus 92 ~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E------------v~~~~~~ 159 (533)
+|+.+++++|++||+.|+.+|..+|.++|++++++|++|+++|++++++|+||+..+++.| ++.+++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999987655 5667777
Q ss_pred HHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHH
Q 009516 160 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 239 (533)
Q Consensus 160 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~l 239 (533)
+++++.......+...+... .......++|+|++++++|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWVR-EDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEEC-TTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhhhhcccccccccc-ccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 88877655443333222222 23456788999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCc----eecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCC-cEEEccC
Q 009516 240 ALQAGIPPGV----VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA-PCIVFDD 314 (533)
Q Consensus 240 l~~aGlP~gv----v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~-~~iV~~d 314 (533)
+++++.|+++ ++.+.+.+.+....+..++. +.||||+..++.+.+.++++.++ +++|+||+| ++||++|
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~a~~~~~~---~~le~gGgn~~viv~~d 233 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRLRE---YLSLVIPRGGYGLISFVRDNATV---PVLETGVGNCHIFVDES 233 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTT---TCSEEEECSCHHHHHHHHHHCSS---CBCCCCCCCEEEEECTT
T ss_pred HHhhhhhccccccccccccccchhhhhhcccccc---cCeEEEcccHHHHHHHhhhcccc---ceecccCCCCCeecccc
Confidence 8887555544 56665555566666665444 33444444455566666666777 888888755 5788899
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHH
Q 009516 315 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 394 (533)
Q Consensus 315 Ad~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a 394 (533)
||++.|++.++.++|.| ||.|++.+|+|||+++||+|+++|.+...+..++++.++.. .
T Consensus 234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~--------------~------ 292 (414)
T d1o20a_ 234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKT--------------R------ 292 (414)
T ss_dssp SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHH--------------H------
T ss_pred cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchhh--------------h------
Confidence 99999999999999876 99999999999999999999999999888776554322111 0
Q ss_pred HHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009516 395 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 474 (533)
Q Consensus 395 ~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~ 474 (533)
++.+.+... ....++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 293 -------------------~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~ 350 (414)
T d1o20a_ 293 -------------------EIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 350 (414)
T ss_dssp -------------------HHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred -------------------hhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHH
Confidence 001111111 2234679999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCC----ChHHHHHhhheeeEEEEec
Q 009516 475 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 475 ~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~----gg~~~l~~~~~~k~v~~~~ 529 (533)
++++++++|+|+||+++.+....|||+.++||+|+. +|++|+++||+.|+|++++
T Consensus 351 ~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~ 409 (414)
T d1o20a_ 351 KFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409 (414)
T ss_dssp HHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECC
Confidence 999999999999999876555567777677776433 3899999999999998864
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.5e-53 Score=440.94 Aligned_cols=398 Identities=19% Similarity=0.164 Sum_probs=279.7
Q ss_pred HHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCHHHHh-------HHHHHHHHH
Q 009516 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPLKEAV-------GEVDYGAKF 159 (533)
Q Consensus 93 dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~~~a~-------~Ev~~~~~~ 159 (533)
.+++.++.|++|++.|+.++.++|.++|+++++.|++++++|+++ .+.+.|++..... ..+...++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 456788999999999999999999999999999999999999885 3445565533210 123444444
Q ss_pred HHHHHHHHHHHhCcccCC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHH
Q 009516 160 IEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237 (533)
Q Consensus 160 l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~ 237 (533)
++..+...+. .+..... ...+...+..+.|+||+++| ||++| ..++++.++||++||+||+||++.++.++..++
T Consensus 84 l~~i~~~~dp-vg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~ 160 (436)
T d1vlua_ 84 IKDVAELEDP-VGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMA 160 (436)
T ss_dssp HHHHHHSCCS-SSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHHhcccc-ceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHH
Confidence 4443332111 1111110 12356777899999999988 66777 667788999999999999999999999998887
Q ss_pred HHHH--------HcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcE
Q 009516 238 ELAL--------QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPC 309 (533)
Q Consensus 238 ~ll~--------~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~ 309 (533)
++++ ++|+|+++++++++ ..++++.|..|++|+.|+||||....+.+.+.+. +| ++.++||++|+
T Consensus 161 ~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~p---vi~~~~G~~~~ 233 (436)
T d1vlua_ 161 KIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IP---VLGHADGICSI 233 (436)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SC---BTTBCSCCEEE
T ss_pred HHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecccc---ce---EEEecCCccce
Confidence 7664 66999999999987 4678899999999999999999998888866542 35 99999999999
Q ss_pred EEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-CccCCCCCCCcccCcccCHHHHHHHH
Q 009516 310 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGVVQGPLINKAALEKVE 388 (533)
Q Consensus 310 iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~~~~Gpli~~~~~~~~~ 388 (533)
||++|||+|.|++.++.++|.+.|| |++.++++||+++++.|...+....+. ..+ . .++...
T Consensus 234 ~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~gv~l----------~--~~~~~~---- 296 (436)
T d1vlua_ 234 YLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEGGVTI----------H--ATKDLK---- 296 (436)
T ss_dssp EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHCCCB----------E--ECHHHH----
T ss_pred eecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhCCcEE----------E--eCHHHH----
Confidence 9999999999999999999999986 889999999999998886655444332 111 0 122222
Q ss_pred HHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 389 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 389 ~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
.......... |.. .+....|++....+.+ +.+|.|+|+++|++++|+||||+++|+.++|||++|||+
T Consensus 297 ~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~ 364 (436)
T d1vlua_ 297 TAYFDKLNEL------GKL---TEAIQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTE 364 (436)
T ss_dssp HHHHHHHHHH------TCC---CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECS
T ss_pred HHhhhhhhhc------ccc---cccccccccCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEEC
Confidence 2222111111 111 1123334443332222 579999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCC----CChHHHHHhhheeeEEEEec
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR----EGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~----~gg~~~l~~~~~~k~v~~~~ 529 (533)
|.+.+++|++++++|.|+||.++.+....+||--.+-|+.+ ..||.||++.|..|++..++
T Consensus 365 d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~ 429 (436)
T d1vlua_ 365 NKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429 (436)
T ss_dssp CHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECS
T ss_pred CHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECC
Confidence 99999999999999999999999877777777333334432 27899999999999998763
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=0.01 Score=58.53 Aligned_cols=322 Identities=18% Similarity=0.181 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----HHHHhHHHHHHH--------HHHHHHHHHHHHHhCcccCC-----
Q 009516 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKP----LKEAVGEVDYGA--------KFIEFYAEEAKRVYGEIIPA----- 177 (533)
Q Consensus 115 ~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~----~~~a~~Ev~~~~--------~~l~~~a~~~~~~~~~~~~~----- 177 (533)
+-.+..+.+.+.++.+.|.-....+....+- +.-...|+..+. +-++..++..+.+.....+.
T Consensus 28 ~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~~~e 107 (431)
T d1k75a_ 28 SITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVE 107 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCceee
Confidence 3344455666666667666555555544321 111123443332 22334444444443222221
Q ss_pred CCCCceeEEEeeeceEEEEEcCCC---cchHHHHHHHHHHhhcCCE--EEEecCCCchHHHHHHHHHHHHcCCCCCceec
Q 009516 178 TLPDRRLFVLKQPVGVAGAITPWN---FPLAMITRKVGPALACGCT--VVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252 (533)
Q Consensus 178 ~~~~~~~~~~~~P~GVv~~I~p~N---~P~~~~~~~l~~ALaaGN~--VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~ 252 (533)
..+|.....++.|+--|++-.|.- ||... +...+||-.+|+. |++-|+...|. +.-..+.+|+.. ++.
T Consensus 108 ~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsv-LM~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~~-iy~- 180 (431)
T d1k75a_ 108 TQPGVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD-VFN- 180 (431)
T ss_dssp EETTEEEEEEEEECSEEEEECCCSSSCCHHHH-HHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE-EEE-
T ss_pred ccCCceeeeeeeehhhheeeccCCCccchHHH-HHHHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCccc-eEe-
Confidence 234667778899999999999964 55544 4457899999985 44566655554 234456777764 222
Q ss_pred ccCChhhHHhHHhc----CCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEE--EccCCCHHHHHHHHHH
Q 009516 253 VMGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI--VFDDADLNVAVNGALA 326 (533)
Q Consensus 253 v~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~i--V~~dAd~d~aa~~i~~ 326 (533)
+ | |.+.-.+|.- -|+||+|+=.|+.-+...=..-......- -+=-+-|.+=++ -++++|.++++.+++.
T Consensus 181 ~-G-GaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~v---gID~~aGPSEv~viAD~~a~p~~iAaDlla 255 (431)
T d1k75a_ 181 V-G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGA---AIDMPAGPSEVLVIADSGATPDFVASDLLS 255 (431)
T ss_dssp C-C-HHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSC---EESCCCCCCEEEEEECTTSCHHHHHHHHHH
T ss_pred c-C-ChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCCcc---ccccccCCceEEEEecCCCCHHHHHHHHHh
Confidence 2 3 4443344443 56899999999988754433222211000 122234555443 4456899999999998
Q ss_pred HHhhccCCccccCCeEEEe--hhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeC
Q 009516 327 AKFRNSGQTCVCANRVLVQ--EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404 (533)
Q Consensus 327 ~~f~~~GQ~C~a~~~v~V~--~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 404 (533)
.+=....- +-++|. +...+++.+.+.+.+..++- . +..+....
T Consensus 256 QAEH~~~a-----~~ilvt~~~~l~~~v~~~i~~~l~~l~r---------------~-------~i~~~s~~-------- 300 (431)
T d1k75a_ 256 QAEHGPDS-----QVILLTPAADMARRVAEAVERQLAELPR---------------A-------ETARQALN-------- 300 (431)
T ss_dssp HHTTCTTC-----EEEEEESCHHHHHHHHHHHHHHHHTCSS---------------C-------HHHHHHHT--------
T ss_pred ccCCcccc-----eeEEEeccHHHHHHHHHHHHHHhhhchH---------------H-------HHHHhhhc--------
Confidence 88765442 335664 35556666666666655421 0 01111110
Q ss_pred CcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc-cee
Q 009516 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL-EYG 483 (533)
Q Consensus 405 g~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l-~~G 483 (533)
-.| ++.++|.+|+++++|..--= -..|.++|.. .+..++ .+|
T Consensus 301 -----------------------------~~~----ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAG 343 (431)
T d1k75a_ 301 -----------------------------ASR----LIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAG 343 (431)
T ss_dssp -----------------------------TCE----EEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCS
T ss_pred -----------------------------cce----EEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcc
Confidence 011 34578999999999984333 3667788875 466666 599
Q ss_pred EEEECCCCC---------CCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 484 LVGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 484 ~V~iN~~~~---------~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
.|++..++. .+..+|-||. +|+.|..+.+.|+..-++
T Consensus 344 sIflG~~sp~a~GDY~aGpnHvLPT~G~-----Ar~~sgLsv~dF~k~~s~ 389 (431)
T d1k75a_ 344 SVFLGDWSPESAGDYASGTNHVLPTYGY-----TATCSSLGLADFQKRMTV 389 (431)
T ss_dssp EEEESTTCCHHHHHHTSSSCCCCCCTTG-----GGTCCCCCGGGGEEEEEE
T ss_pred hhhcCCCCcchhhccccCCCccCCCCCc-----eeecCCCCHHHeeeeeeE
Confidence 999987654 2346787765 444444577788876554
|