Citrus Sinensis ID: 009572

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530--

MRRRGQDFRRPVRRRISHVVWWTLCGIAVLLFIVILSKESQIESRPTFPKRYDRRDRIMEGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNAATRRTPLTTRETETAIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEQMGSVNEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQMEKLTDNNLYHFCVFSDNILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH

cccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHccccccEEEEEEccccccHHHEEEHHHccccccccEEEEEEEccccHHHHHHHHHHccccccEEEEEEEEcccccccccHHHHHHHHccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHcccccEEEEEEccccccccHHHHHcccccccEEEEEEcccHHHHHHccccccccHHHHccccccccccccccccccHHHHHHHcHHHHHHHHHHHccccccccccccccHHHHccccEEEcccccccccccccccccccccccEEEEccccccccccccccccHHHHHHHHccccccHHHcccc

cccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHccccccccccHccccccEEEEEEcccHHHHEEEEHHHHHcccccccEEEEEEEccccHHHHHHHHHHccccccEEEEEEccccccccccccHHHHHHccHHHHHHEEcccccccccccccccHHHHHHHHHHHHHHHHHcHHccEEEEEcccEEEEEccHHHHcccccccEEccHHcccccHHHHHHHcccccHHHHHcccccHHHHHcccEEEcHHHHHHHcHHHHHHHHHHHccccEEEEccccccHEEEEcccccccccccEEEccccccccHHHHHccEEEEEccccccHHHHccHcccHHHHHHcccccHHHHHcccc

mrrrgqdfrrpvrRRISHVVWWTLCGIAVLLFIVILSKesqiesrptfpkrydrrDRIMEGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLsnaatrrtplttreTETAIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEqmgsvneksskygqiaaeeVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQMEkltdnnlyhfcvfsdnILATSVVVNstasnsknpdmIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEdfkwlnasyVPVLkqlqdsetqsyyfsgnsdggrtpikfrnpkylSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHkylnyshplirehfdpdacgwafgMNIFDLVEWRKRNVTGIYHYWqeknvdrtlwklgtlppglltfyglteplnpawhvlglgytnvdpqliEKGAVLhyngnskpwlKIGMEKYKPLWEkyvdynhpqlqqcnfh

mrrrgqdfrrpvrrrishvvwWTLCGIAVLLFIVILskesqiesrptfpkrydrrdRIMEGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQvllsnaatrrtplttretETAIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEQMGSVNEKSSKYGQIAAEEVPKSLYCLGVRLTtewfgnqnlqRKLKERKQMEKLTDNNLYHFCVFSDNILATSVVVNStasnsknpdMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLKQLQDSETQSYYfsgnsdggrtpIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALfsinlngnvNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWqeknvdrtLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH

MRRRGQDFRRPVRRRISHVVWWTLCGIAVLLFIVILSKESQIESRPTFPKRYDRRDRIMEGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNaatrrtplttretetaIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEQMGSVNEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQMEKLTDNNLYHFCVFSDNILatsvvvnstasnsKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPAlkkvvfldddvvvqkdlSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH

************RRRISHVVWWTLCGIAVLLFIVILSK*******************IMEGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNAATRRTPLTTRETETAIRDMALLLYQAQQFHYDSATMIMRLKAKIQG****************QIAAEEVPKSLYCLGVRLTTEWFGNQNLQRK********KLTDNNLYHFCVFSDNILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLKQLQDSETQSYYFSGN*DGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQ*******

*************RRISHVVWWTLCGIAVLLFIV**************************************SVTRQLTDQISLAKAFVVIAKE*N***F*WELSAQIRNS************************DMALLLYQAQQFHYDSATMIMRLKAKIQ**************KYGQIAAEEVPKSLYCLGVRLTTEWF********************NNLYHFCVFSDNILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCN**

**********PVRRRISHVVWWTLCGIAVLLFIVILSKESQIESRPTFPKRYDRRDRIMEGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNAATRRTPLTTRETETAIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEQMGSVNEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQMEKLTDNNLYHFCVFSDNILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH

*******FRRPVRRRISHVVWWTLCGIAVLLFIVILSKE*Q**SRPTFPKRYDRRDRIMEGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNAATRRTPLTTRETETAIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEQMGSVNEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQMEKLTDNNLYHFCVFSDNILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MRRRGQDFRRPVRRRISHVVWWTLCGIAVLLFIVILSKESQIESRPTFPKRYDRRDRIMEGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNAATRRTPLTTRETETAIRDMALLLYQAQQFHYDSATMxxxxxxxxxxxxxxxxxxxxxSSKYGQIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQMEKLTDNNLYHFCVFSDNILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		532	2.2.26 [Sep-21-2011]
Q9SKT6		536	Probable galacturonosyltr	yes	no	1.0	0.992	0.822	0.0
Q949Q1		537	Probable galacturonosyltr	no	no	0.990	0.981	0.546	1e-173
Q9LE59		673	Polygalacturonate 4-alpha	no	no	0.868	0.686	0.498	1e-141
Q93ZX7		616	Probable galacturonosyltr	no	no	0.866	0.748	0.492	1e-135
Q0WQD2		680	Probable galacturonosyltr	no	no	0.866	0.677	0.494	1e-134
Q9LSG3		559	Galacturonosyltransferase	no	no	0.753	0.717	0.491	1e-118
Q9FWA4		561	Probable galacturonosyltr	no	no	0.855	0.811	0.461	1e-110
Q9ZPZ1		528	Putative galacturonosyltr	no	no	0.800	0.806	0.432	1e-106
Q0WV13		533	Probable galacturonosyltr	no	no	0.778	0.776	0.422	6e-99
Q8GWT1		532	Probable galacturonosyltr	no	no	0.727	0.727	0.439	5e-96

>sp\|Q9SKT6\|GAUTA_ARATH Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana GN=GAUT10 PE=2 SV=2	Back alignment and function desciption

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/536 (82%), Positives = 485/536 (90%), Gaps = 4/536 (0%)

Query: 1   MRRRGQD-FRRPVRRRISHVVWWTLCGIAVLLFIVILSKESQIESRPTFPKRYDRRDRIM 59
           MRRRG D FRR  RR+IS+VVWW L GIA+LLF +ILSK   IE RP+ PKR  R D+ +
Sbjct: 1   MRRRGGDSFRRAGRRKISNVVWWVLSGIALLLFFLILSKAGHIEPRPSIPKRRYRNDKFV 60

Query: 60  EGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNAA 119
           EG+N+T+EMLS  SV RQ+ DQI+LAKAFVVIAKES NLQFAW+LSAQIRNSQ+LLS+AA
Sbjct: 61  EGMNMTEEMLSPTSVARQVNDQIALAKAFVVIAKESKNLQFAWDLSAQIRNSQLLLSSAA 120

Query: 120 TRRTPLTTRETETAIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEQMGSVNEKSSKY 179
           TRR+PLT  E+E+ IRDMA+LLYQAQQ HYDSATMIMRLKA IQ LEEQM SV+EKSSKY
Sbjct: 121 TRRSPLTVLESESTIRDMAVLLYQAQQLHYDSATMIMRLKASIQALEEQMSSVSEKSSKY 180

Query: 180 GQIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQME-KLTDNNLYHFCVFSDNILA 238
           GQIAAEEVPKSLYCLGVRLTTEWF N +LQR LKER +++ KLTDN+LYHFCVFSDNI+A
Sbjct: 181 GQIAAEEVPKSLYCLGVRLTTEWFQNLDLQRTLKERSRVDSKLTDNSLYHFCVFSDNIIA 240

Query: 239 TSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAIN--SFRGVTVEVQKFEDFKWLN 296
           TSVVVNSTA NSK P+ +VFHLVT+EINYAAMKAWFAIN  + RGVTVEVQKFEDF WLN
Sbjct: 241 TSVVVNSTALNSKAPEKVVFHLVTNEINYAAMKAWFAINMDNLRGVTVEVQKFEDFSWLN 300

Query: 297 ASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVV 356
           ASYVPVLKQLQDS+TQSYYFSG++D GRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVV
Sbjct: 301 ASYVPVLKQLQDSDTQSYYFSGHNDDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVV 360

Query: 357 FLDDDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGW 416
           FLDDDVVVQKDLS+LFSI+LN NVNGAVETCMETFHRYHKYLNYSHPLIR HFDPDACGW
Sbjct: 361 FLDDDVVVQKDLSSLFSIDLNKNVNGAVETCMETFHRYHKYLNYSHPLIRSHFDPDACGW 420

Query: 417 AFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVL 476
           AFGMN+FDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTE L  +WH+L
Sbjct: 421 AFGMNVFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEALEASWHIL 480

Query: 477 GLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH 532
           GLGYTNVD ++IEKGAVLH+NGN KPWLKIG+EKYKPLWE+YVDY  P +QQCNFH
Sbjct: 481 GLGYTNVDARVIEKGAVLHFNGNLKPWLKIGIEKYKPLWERYVDYTSPFMQQCNFH 536

May be involved in pectin and/or xylans biosynthesis in cell walls.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q949Q1\|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1	Back alignment and function description

>sp\|Q9LE59\|GAUT1_ARATH Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1	Back alignment and function description

>sp\|Q93ZX7\|GAUT4_ARATH Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana GN=GAUT4 PE=2 SV=1	Back alignment and function description

>sp\|Q0WQD2\|GAUT3_ARATH Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana GN=GAUT3 PE=2 SV=2	Back alignment and function description

>sp\|Q9LSG3\|GAUT8_ARATH Galacturonosyltransferase 8 OS=Arabidopsis thaliana GN=GAUT8 PE=1 SV=1	Back alignment and function description

>sp\|Q9FWA4\|GAUT9_ARATH Probable galacturonosyltransferase 9 OS=Arabidopsis thaliana GN=GAUT9 PE=2 SV=1	Back alignment and function description

>sp\|Q9ZPZ1\|GAUT2_ARATH Putative galacturonosyltransferase 2 OS=Arabidopsis thaliana GN=GAUT2 PE=5 SV=1	Back alignment and function description

>sp\|Q0WV13\|GAUTD_ARATH Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana GN=GAUT13 PE=2 SV=1	Back alignment and function description

>sp\|Q8GWT1\|GAUTE_ARATH Probable galacturonosyltransferase 14 OS=Arabidopsis thaliana GN=GAUT14 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		532
357446915		533	Glycosyl transferase protein A [Medicago	1.0	0.998	0.851	0.0
224126999		534	glycosyltransferase, CAZy family GT8 [Po	1.0	0.996	0.883	0.0
356543795		533	PREDICTED: probable galacturonosyltransf	1.0	0.998	0.848	0.0
356549952		533	PREDICTED: probable galacturonosyltransf	1.0	0.998	0.855	0.0
449517673		534	PREDICTED: probable galacturonosyltransf	0.971	0.968	0.838	0.0
224126773		534	glycosyltransferase, CAZy family GT8 [Po	1.0	0.996	0.859	0.0
225447266		533	PREDICTED: probable galacturonosyltransf	1.0	0.998	0.849	0.0
440583703		592	similar to galacturonosyltransferase 10	1.0	0.898	0.771	0.0
18399484		536	alpha-1,4-galacturonosyltransferase [Ara	1.0	0.992	0.822	0.0
51971923		536	unknown protein [Arabidopsis thaliana]	1.0	0.992	0.820	0.0

>gi\|357446915\|ref\|XP_003593733.1\| Glycosyl transferase protein A [Medicago truncatula] gi\|355482781\|gb\|AES63984.1\| Glycosyl transferase protein A [Medicago truncatula]	Back alignment and taxonomy information

 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/533 (85%), Positives = 496/533 (93%), Gaps = 1/533 (0%)

Query: 1   MRRRGQDFRRPVRRRISHVVWWTLCGIAVLLFIVILSKESQIESRPTFPKRYDRRDRIME 60
           MRRR  DFRRPVRR++   +WW LC   +LLFI IL++ +QIESRP   KR  + DRIME
Sbjct: 1   MRRRATDFRRPVRRKVPDALWWALCCAVILLFIYILTRGTQIESRPPLSKRTYKNDRIME 60

Query: 61  GLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNAAT 120
           GLNIT+EMLS++SVTRQL DQISLAKAFVVIAKESNNLQFAWELSAQIRNSQ+LLSNAAT
Sbjct: 61  GLNITEEMLSSDSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAAT 120

Query: 121 RRTPLTTRETETAIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEQMGSVNEKSSKYG 180
           RR+PLTTRE+++AIRDMALLLYQAQQ HYDSATMIMR KAKIQ LEEQM SV+EKSSKYG
Sbjct: 121 RRSPLTTRESDSAIRDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVSEKSSKYG 180

Query: 181 QIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQME-KLTDNNLYHFCVFSDNILAT 239
           QIAAEEVPKSLYCLGVRLTTEWF N NLQ+KLK+++Q+E K+ D NLYHFCVFSDNI+AT
Sbjct: 181 QIAAEEVPKSLYCLGVRLTTEWFKNLNLQKKLKDKRQVEMKIKDKNLYHFCVFSDNIIAT 240

Query: 240 SVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASY 299
           SVV+NSTA  SKNP+MIVFHLVTDEINYA+MKAWFA+N FRGVTVEVQK+EDF WLNASY
Sbjct: 241 SVVINSTAKTSKNPNMIVFHLVTDEINYASMKAWFAMNDFRGVTVEVQKYEDFSWLNASY 300

Query: 300 VPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLD 359
           VPVLKQLQDSE QSYYFSGNSDGG+TPIKFRNPKYLSMLNHLRFYIPEVFPALKK+VFLD
Sbjct: 301 VPVLKQLQDSEIQSYYFSGNSDGGKTPIKFRNPKYLSMLNHLRFYIPEVFPALKKIVFLD 360

Query: 360 DDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFG 419
           DDVVVQKDLS LFSI+LNGNVNGAVETCMETFHRYHKYLNYSHPLIR HFDPDACGWAFG
Sbjct: 361 DDVVVQKDLSDLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFG 420

Query: 420 MNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLG 479
           MN+FDLVEWRK+NVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPL+P+WHVLG G
Sbjct: 421 MNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFG 480

Query: 480 YTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH 532
           YTNVDPQLIE+GAVLH+NGNSKPWLKIG+EKYKPLWEK++DY+H  LQQCNFH
Sbjct: 481 YTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKHIDYSHTFLQQCNFH 533

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224126999\|ref\|XP_002329358.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi\|222870408\|gb\|EEF07539.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356543795\|ref\|XP_003540345.1\| PREDICTED: probable galacturonosyltransferase 10-like [Glycine max]	Back alignment and taxonomy information

>gi\|356549952\|ref\|XP_003543354.1\| PREDICTED: probable galacturonosyltransferase 10-like [Glycine max]	Back alignment and taxonomy information

>gi\|449517673\|ref\|XP_004165869.1\| PREDICTED: probable galacturonosyltransferase 10-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224126773\|ref\|XP_002319923.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi\|222858299\|gb\|EEE95846.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225447266\|ref\|XP_002279062.1\| PREDICTED: probable galacturonosyltransferase 10 [Vitis vinifera] gi\|297739280\|emb\|CBI28931.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|440583703\|emb\|CCH47207.1\| similar to galacturonosyltransferase 10 [Lupinus angustifolius]	Back alignment and taxonomy information

>gi|18399484|ref|NP_565485.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi|75206551|sp|Q9SKT6.2|GAUTA_ARATH RecName: Full=Probable galacturonosyltransferase 10; AltName: Full=Like glycosyl transferase 4 gi|14334692|gb|AAK59524.1| unknown protein [Arabidopsis thaliana] gi|16323394|gb|AAL15191.1| unknown protein [Arabidopsis thaliana] gi|20197691|gb|AAD20914.2| Expressed protein [Arabidopsis thaliana] gi|330251982|gb|AEC07076.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|51971923\|dbj\|BAD44626.1\| unknown protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		532
TAIR\|locus:2051426		536	GAUT10 "galacturonosyltransfer	1.0	0.992	0.75	3e-220
TAIR\|locus:2027453		537	GAUT11 "galacturonosyltransfer	0.992	0.983	0.484	1.8e-142
TAIR\|locus:2098836		673	GAUT1 "galacturonosyltransfera	0.860	0.680	0.451	1.9e-115
TAIR\|locus:2160957		616	GAUT4 "galacturonosyltransfera	0.868	0.75	0.434	2.3e-110
TAIR\|locus:2121753		680	GAUT3 "galacturonosyltransfera	0.866	0.677	0.44	7e-109
TAIR\|locus:2074572		561	GAUT9 "galacturonosyltransfera	0.740	0.702	0.461	2.8e-101
TAIR\|locus:2090210		559	QUA1 "QUASIMODO 1" [Arabidopsi	0.716	0.681	0.456	2.9e-96
TAIR\|locus:2039934		528	GAUT2 "galacturonosyltransfera	0.573	0.577	0.329	1.5e-91
TAIR\|locus:504955915		610	LGT5 "los glycosyltransferase	0.379	0.331	0.432	1.6e-75
TAIR\|locus:2102082		533	GAUT13 "galacturonosyltransfer	0.567	0.566	0.374	1.2e-56

TAIR\|locus:2051426 GAUT10 "galacturonosyltransferase 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2127 (753.8 bits), Expect = 3.0e-220, P = 3.0e-220
 Identities = 402/536 (75%), Positives = 443/536 (82%)

Query:     1 MRRRGQD-FRRPVRRRISHVVWWTLCGIAVLLFIVILSKESQIESRPTFPKRYDRRDRIM 59
             MRRRG D FRR  RR+IS+VVWW L GIA+LLF +ILSK   IE RP+ PKR  R D+ +
Sbjct:     1 MRRRGGDSFRRAGRRKISNVVWWVLSGIALLLFFLILSKAGHIEPRPSIPKRRYRNDKFV 60

Query:    60 EGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNXX 119
             EG+N+T+EMLS  SV RQ+ DQI+LAKAFVVIAKES NLQFAW+LSAQIRNSQ+LLS+  
Sbjct:    61 EGMNMTEEMLSPTSVARQVNDQIALAKAFVVIAKESKNLQFAWDLSAQIRNSQLLLSSAA 120

Query:   120 XXXXXXXXXXXXXXIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEQMGSVNEKSSKY 179
                           IRDMA+LLYQAQQ HYDSATMIMRLKA IQ LEEQM SV+EKSSKY
Sbjct:   121 TRRSPLTVLESESTIRDMAVLLYQAQQLHYDSATMIMRLKASIQALEEQMSSVSEKSSKY 180

Query:   180 GQIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQME-KLTDNNLYHFCVFSDNILX 238
             GQIAAEEVPKSLYCLGVRLTTEWF N +LQR LKER +++ KLTDN+LYHFCVFSDNI+ 
Sbjct:   181 GQIAAEEVPKSLYCLGVRLTTEWFQNLDLQRTLKERSRVDSKLTDNSLYHFCVFSDNIIA 240

Query:   239 XXXXXXXXXXXXKNPDMIVFHLVTDEINYAAMKAWFAIN--SFRGVTVEVQKFEDFKWLN 296
                         K P+ +VFHLVT+EINYAAMKAWFAIN  + RGVTVEVQKFEDF WLN
Sbjct:   241 TSVVVNSTALNSKAPEKVVFHLVTNEINYAAMKAWFAINMDNLRGVTVEVQKFEDFSWLN 300

Query:   297 ASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPAXXXXX 356
             ASYVPVLKQLQDS+TQSYYFSG++D GRTPIKFRNPKYLSMLNHLRFYIPEVFPA     
Sbjct:   301 ASYVPVLKQLQDSDTQSYYFSGHNDDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVV 360

Query:   357 XXXXXXXXXXXXSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGW 416
                         S+LFSI+LN NVNGAVETCMETFHRYHKYLNYSHPLIR HFDPDACGW
Sbjct:   361 FLDDDVVVQKDLSSLFSIDLNKNVNGAVETCMETFHRYHKYLNYSHPLIRSHFDPDACGW 420

Query:   417 AFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVL 476
             AFGMN+FDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTE L  +WH+L
Sbjct:   421 AFGMNVFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEALEASWHIL 480

Query:   477 GLGYTNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH 532
             GLGYTNVD ++IEKGAVLH+NGN KPWLKIG+EKYKPLWE+YVDY  P +QQCNFH
Sbjct:   481 GLGYTNVDARVIEKGAVLHFNGNLKPWLKIGIEKYKPLWERYVDYTSPFMQQCNFH 536

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016051 "carbohydrate biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA;ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR\|locus:2027453 GAUT11 "galacturonosyltransferase 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2098836 GAUT1 "galacturonosyltransferase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2160957 GAUT4 "galacturonosyltransferase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121753 GAUT3 "galacturonosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2074572 GAUT9 "galacturonosyltransferase 9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2090210 QUA1 "QUASIMODO 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2039934 GAUT2 "galacturonosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:504955915 LGT5 "los glycosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2102082 GAUT13 "galacturonosyltransferase 13" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SKT6	GAUTA_ARATH	2, ., 4, ., 1, ., -	0.8227	1.0	0.9925	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_scaffold_120000045	glycosyltransferase, CAZy family GT8 (EC-2.4.1.43) (534 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XIV.2235.1	hypothetical protein (287 aa)	•	0.899
	gw1.XIII.724.1	pectinesterase family protein (EC-3.1.1.11) (512 aa)	•	0.899
	gw1.X.3259.1	pectinesterase family protein (EC-3.1.1.11) (555 aa)	•	0.899
	gw1.IV.576.1	pectinesterase family protein (EC-3.1.1.11) (315 aa)	•	0.899
	grail3.0035002801	hypothetical protein (431 aa)	•	0.899
	grail3.0033029301	hypothetical protein (435 aa)	•	0.899
	fgenesh4_pm.C_LG_II000883	hypothetical protein (450 aa)	•	0.899
	fgenesh4_pg.C_LG_XIII000035	hypothetical protein (339 aa)	•	0.899
	eugene3.00880019	hypothetical protein (457 aa)	•	0.899
	eugene3.00280097	RecName- Full=Pectinesterase; EC=3.1.1.11; (520 aa)	•	0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		532
PLN02742		534	PLN02742, PLN02742, Probable galacturonosyltransfe	0.0
PLN02829		639	PLN02829, PLN02829, Probable galacturonosyltransfe	0.0
PLN02910		657	PLN02910, PLN02910, polygalacturonate 4-alpha-gala	0.0
PLN02523		559	PLN02523, PLN02523, galacturonosyltransferase	1e-176
PLN02718		603	PLN02718, PLN02718, Probable galacturonosyltransfe	1e-143
PLN02870		533	PLN02870, PLN02870, Probable galacturonosyltransfe	1e-137
PLN02659		534	PLN02659, PLN02659, Probable galacturonosyltransfe	1e-115
cd06429		257	cd06429, GT8_like_1, GT8_like_1 represents a subfa	1e-114
PLN02867		535	PLN02867, PLN02867, Probable galacturonosyltransfe	1e-108
PLN02769		629	PLN02769, PLN02769, Probable galacturonosyltransfe	8e-98
pfam01501		248	pfam01501, Glyco_transf_8, Glycosyl transferase fa	6e-60
cd04194		248	cd04194, GT8_A4GalT_like, A4GalT_like proteins cat	1e-14
cd00505		246	cd00505, Glyco_transf_8, Members of glycosyltransf	2e-12
COG1442		325	COG1442, RfaJ, Lipopolysaccharide biosynthesis pro	7e-07

>gnl\|CDD\|215395 PLN02742, PLN02742, Probable galacturonosyltransferase	Back alignment and domain information

 Score = 1057 bits (2735), Expect = 0.0
 Identities = 393/534 (73%), Positives = 453/534 (84%), Gaps = 2/534 (0%)

Query: 1   MRRRGQDFRRPVRRRISHVVWWTLCGIAVLLFIVILSKESQIESRPTFPKR-YDRRDRIM 59
           MRRR  DFRRPVRRR+S  +WW L G +VL  ++ + K S+IE RP   +R Y + +   
Sbjct: 1   MRRRPADFRRPVRRRLSQWIWWLLGGFSVLGLVLFVHKHSEIEPRPPLSERNYRKEEVNH 60

Query: 60  EGLNITDEMLSANSVTRQLTDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNAA 119
           EGLN T+EMLSA S +RQL DQI+LAKA+VVIAKE NNLQ AWELSAQIRN Q+LLS AA
Sbjct: 61  EGLNFTEEMLSATSFSRQLADQITLAKAYVVIAKEHNNLQLAWELSAQIRNCQLLLSKAA 120

Query: 120 TRRTPLTTRETETAIRDMALLLYQAQQFHYDSATMIMRLKAKIQGLEEQMGSVNEKSSKY 179
           TR  P+T  E E  IRD+A L+YQAQ  HYDSAT IM LKA IQ LEE+  +   +S+K+
Sbjct: 121 TRGEPITVEEAEPIIRDLAALIYQAQDLHYDSATTIMTLKAHIQALEERANAATVQSTKF 180

Query: 180 GQIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQMEKLTDNNLYHFCVFSDNILAT 239
           GQ+AAE +PKSLYCLGVRLTTEWF N  LQRK +E++   +L DNNLYHFCVFSDNILAT
Sbjct: 181 GQLAAEALPKSLYCLGVRLTTEWFKNPKLQRKAEEKRNSPRLVDNNLYHFCVFSDNILAT 240

Query: 240 SVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASY 299
           SVVVNST SN+K+PD +VFHLVTDE+NY AM+AWFA+N F+GVTVEVQK E+F WLNASY
Sbjct: 241 SVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASY 300

Query: 300 VPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLD 359
           VPVLKQLQDS+TQSYYFSG+ D G+T IKFRNPKYLSMLNHLRFYIPE++PAL+KVVFLD
Sbjct: 301 VPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLD 360

Query: 360 DDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYLNYSHPLIREHFDPDACGWAFG 419
           DDVVVQKDL+ LFSI+L+GNVNGAVETC+ETFHRYHKYLN+SHPLI  HFDPDACGWAFG
Sbjct: 361 DDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFG 420

Query: 420 MNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGLG 479
           MN+FDLV WRK NVT IYHYWQE+NVDRTLWKLGTLPPGLLTFYGLTEPL+  WHVLGLG
Sbjct: 421 MNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLG 480

Query: 480 Y-TNVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH 532
           Y TN+DP+LIE  AVLH+NGN KPWLK+ +E+YKPLWE+YV+Y+HP LQQCNFH
Sbjct: 481 YDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKPLWERYVNYSHPYLQQCNFH 534

Length = 534

>gnl\|CDD\|215443 PLN02829, PLN02829, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215286 PLN02523, PLN02523, galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|178320 PLN02718, PLN02718, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215468 PLN02870, PLN02870, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215356 PLN02659, PLN02659, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>gnl\|CDD\|178458 PLN02867, PLN02867, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215412 PLN02769, PLN02769, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8	Back alignment and domain information

>gnl\|CDD\|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>gnl\|CDD\|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>gnl\|CDD\|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		532
PLN02742		534	Probable galacturonosyltransferase	100.0
PLN02829		639	Probable galacturonosyltransferase	100.0
PLN02910		657	polygalacturonate 4-alpha-galacturonosyltransferas	100.0
PLN02769		629	Probable galacturonosyltransferase	100.0
PLN02718		603	Probable galacturonosyltransferase	100.0
PLN02523		559	galacturonosyltransferase	100.0
PLN02870		533	Probable galacturonosyltransferase	100.0
PLN02867		535	Probable galacturonosyltransferase	100.0
PLN02659		534	Probable galacturonosyltransferase	100.0
cd06429		257	GT8_like_1 GT8_like_1 represents a subfamily of GT	100.0
PRK15171		334	lipopolysaccharide 1,3-galactosyltransferase; Prov	100.0
cd06431		280	GT8_LARGE_C LARGE catalytic domain has closest hom	100.0
cd00505		246	Glyco_transf_8 Members of glycosyltransferase fami	100.0
cd04194		248	GT8_A4GalT_like A4GalT_like proteins catalyze the	100.0
COG1442		325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	100.0
PF01501		250	Glyco_transf_8: Glycosyl transferase family 8; Int	100.0
cd06432		248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	99.98
cd06430		304	GT8_like_2 GT8_like_2 represents a subfamily of GT	99.98
cd02537		240	GT8_Glycogenin Glycogenin belongs the GT 8 family	99.93
PLN00176		333	galactinol synthase	99.91
cd06914		278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	99.73
KOG1879		1470	consensus UDP-glucose:glycoprotein glucosyltransfe	99.26
COG5597		368	Alpha-N-acetylglucosamine transferase [Cell envelo	97.43
PLN03182		429	xyloglucan 6-xylosyltransferase; Provisional	93.43
PF03407		212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	93.21
PF11051		271	Mannosyl_trans3: Mannosyltransferase putative; Int	81.38

>PLN02742 Probable galacturonosyltransferase	Back alignment and domain information

Probab=100.00  E-value=8.4e-150  Score=1192.71  Aligned_cols=531  Identities=73%  Similarity=1.223  Sum_probs=511.9

Q ss_pred             CCCCCccCccccccccchhHHHHHHHHHHHHHHHHhhhcccc-cCCCCCCCCccchhhhc-cCCCccccccChhhHHHHh
Q 009572            1 MRRRGQDFRRPVRRRISHVVWWTLCGIAVLLFIVILSKESQI-ESRPTFPKRYDRRDRIM-EGLNITDEMLSANSVTRQL   78 (532)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   78 (532)
                      ||||++|+|||+|||+++| ||+++|+|+++|+++|+-.+++ +++||+++++.+.+++. +|+|+|||++++|+++|+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   79 (534)
T PLN02742          1 MRRRPADFRRPVRRRLSQW-IWWLLGGFSVLGLVLFVHKHSEIEPRPPLSERNYRKEEVNHEGLNFTEEMLSATSFSRQL   79 (534)
T ss_pred             CCCchhhcccchhcchhhh-HHHHHHHHHHHHHHHHHhccCCCCCCCCCccccccccccccccccchhhhcChHHHHHHH
Confidence            8999999999999999999 9999999999999999855555 55999999999888777 9999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhhhhhcCCCCCCchhHHHHHHHHHHHHHHhhccccChHHHHHHH
Q 009572           79 TDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQVLLSNAATRRTPLTTRETETAIRDMALLLYQAQQFHYDSATMIMRL  158 (532)
Q Consensus        79 ~dq~~~a~~y~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl  158 (532)
                      ||||||||||++|||++||++|++||++||||+||+||+|++|+++++++++.++|+.|+++|++||+++|||+++++||
T Consensus        80 ~dql~~Ak~y~~ia~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~~~~~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~kl  159 (534)
T PLN02742         80 ADQITLAKAYVVIAKEHNNLQLAWELSAQIRNCQLLLSKAATRGEPITVEEAEPIIRDLAALIYQAQDLHYDSATTIMTL  159 (534)
T ss_pred             HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987778999999999999999999999999999999


Q ss_pred             HHHHHhHHHHhhhhhhccccccccccccCCccccchhhhhhHHHhhCchhHhhhhhhhccccccCCCceeEEEEeCCCcc
Q 009572          159 KAKIQGLEEQMGSVNEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFGNQNLQRKLKERKQMEKLTDNNLYHFCVFSDNILA  238 (532)
Q Consensus       159 ~~~~~~~e~~~~~~~~~~~~~~~~a~~~~Pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~l~d~~~~hIa~~sDnvl~  238 (532)
                      |+|++++||+++++++||+|++||||+|+|||||||+||||+|||++++++++.++++++++++||+++|+|++||||+|
T Consensus       160 r~~l~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvlA  239 (534)
T PLN02742        160 KAHIQALEERANAATVQSTKFGQLAAEALPKSLYCLGVRLTTEWFKNPKLQRKAEEKRNSPRLVDNNLYHFCVFSDNILA  239 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchHhHHHHHhCchhhhccccccccccccCCCcceEEEEeccchh
Confidence            99999999999999999999999999999999999999999999999999887777789999999999999999999999


Q ss_pred             chhhHHHHhhhCCCCCcEEEEEEeCcccHHHHHHHHHhccCCCceEEEeeeccchhccccccchhhhccccCcceeeecC
Q 009572          239 TSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLKQLQDSETQSYYFSG  318 (532)
Q Consensus       239 ~sV~I~Sil~N~~~p~~i~FHIvtd~is~~~~~~wf~~n~~~~a~I~v~~i~~f~wl~~~y~p~l~ql~~~~~~~~~F~~  318 (532)
                      ++|+|||++.|+++|++++||||||+.++.+|+.||..|++++++|+|+++++|.|++.+|+|+++|+++++++.|||.+
T Consensus       240 asvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ql~~~~~~~~yf~~  319 (534)
T PLN02742        240 TSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVLKQLQDSDTQSYYFSG  319 (534)
T ss_pred             hhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccccchHHHHhhhhhhhhhhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCCCcccCCCCcchhhhhHHHhhhhhcCCCCeEEEEecceeeccCchHHhccCCCCCeeEeeeccchhhhhhhccc
Q 009572          319 NSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAVETCMETFHRYHKYL  398 (532)
Q Consensus       319 ~~~~~~~~lk~r~~~~lS~~ty~Rf~lPellP~ldKVLYLD~DvIV~~DLseLw~iDL~g~~iaAV~Dc~~~~~~~~~~l  398 (532)
                      +......+.++++|+|+|+++|+||+||++||+++||||||+|+||++||++||++||+|+++|||+||...|++|.+++
T Consensus       320 ~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yL  399 (534)
T PLN02742        320 SQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYL  399 (534)
T ss_pred             ccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhh
Confidence            76444477899999999999999999999999999999999999999999999999999999999999988899999999


Q ss_pred             CCCCccccccCCCCCCccccceeeeechHHHHhhHHHHHHHHHHhcCCcccccCCCCChhhhhccCceeecCCccccccC
Q 009572          399 NYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLNPAWHVLGL  478 (532)
Q Consensus       399 n~s~p~i~~~~~~~~~yfNsGVlLiNL~~wR~~nit~~~~~~~~~~~d~~l~~~~~L~~~n~~F~~~i~~L~~~WN~~~l  478 (532)
                      ||++|+++++|+++.||||+|||||||++||++++|+.++.|++.+.+..+|++|+||+++++|+|++++||.+||+.|+
T Consensus       400 nfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gL  479 (534)
T PLN02742        400 NFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGL  479 (534)
T ss_pred             cccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceecChhheeccc
Confidence            99999999999999999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             CCC-CCchhhcCCCeEEEccCCCCCcccCCCCCCHHHHHHHHhcCCcccccccCC
Q 009572          479 GYT-NVDPQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQLQQCNFH  532 (532)
Q Consensus       479 gy~-~~~~~~~~~~~IIHy~G~~KPW~~~~~~~y~~~W~kY~~~t~pfl~~cn~~  532 (532)
                      ||+ +++.+.+++|+||||+|++|||.+.+.++|+++|++|+++++|||++||||
T Consensus       480 G~~~~v~~~~i~~aaILHynG~~KPWl~~~i~~yr~~W~kYl~~s~~fl~~Cni~  534 (534)
T PLN02742        480 GYDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKPLWERYVNYSHPYLQQCNFH  534 (534)
T ss_pred             ccccccchhhccCCeEEEECCCCCcccccCCcccchHHHHHHccCCHHHHhCCCC
Confidence            997 667778999999999999999999999999999999999999999999997

>PLN02829 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>PLN02769 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02718 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02523 galacturonosyltransferase	Back alignment and domain information

>PLN02870 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02867 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02659 Probable galacturonosyltransferase	Back alignment and domain information

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional	Back alignment and domain information

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis	Back alignment and domain information

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family	Back alignment and domain information

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	Back alignment and domain information

>PLN00176 galactinol synthase	Back alignment and domain information

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family	Back alignment and domain information

>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []	Back alignment and domain information

>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		532
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	3e-57
3tzt_A		276	Glycosyl transferase family 8; structural genomics	2e-22
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311	Back alignment and structure

 Score =  192 bits (490), Expect = 3e-57
 Identities = 51/315 (16%), Positives = 101/315 (32%), Gaps = 61/315 (19%)

Query: 228 HFCVFSDN--ILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVE 285
                +D+       V   S  +   + + I FH++   I+ A   A  A     G  + 
Sbjct: 2   DIVFAADDNYAAYLCVAAKSVEAAHPDTE-IRFHVLDAGISEANRAAVAANLRGGGGNIR 60

Query: 286 VQKFEDFKWLNASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYI 345
                   +                                    N +++S+  + R  +
Sbjct: 61  FIDVNPEDFAGFPL-------------------------------NIRHISITTYARLKL 89

Query: 346 PEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAV-ETCMETFHRYHKYLNYSHPL 404
            E      KV++LD DV+V+  L+ L+  +L  N  GA  +  +E    Y + +  +   
Sbjct: 90  GEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADG- 148

Query: 405 IREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYG 464
                      +  G+ + +L +WR+ ++  +   W E+  D   ++   +  GL  F G
Sbjct: 149 --------EYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGL--FKG 198

Query: 465 LTEPLNPAWHVLGLGYTNVDPQL---------------IEKGAVLHYNGNSKPWLKIGME 509
                N  ++ +   Y  +                   +   AV HY G +KPW +    
Sbjct: 199 GVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA 258

Query: 510 KYKPLWEKYVDYNHP 524
                + +       
Sbjct: 259 WGAERFTELAGSLTT 273

PyMOL of 1g9r

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		532
3tzt_A		276	Glycosyl transferase family 8; structural genomics	100.0
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	100.0
1ll2_A		333	Glycogenin-1; protein-substrate complex, beta-alph	99.93
3u2u_A		263	Glycogenin-1, GN-1, GN1; structural genomics, stru	99.91

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0	Back alignment and structure

Probab=100.00  E-value=9.2e-46  Score=373.81  Aligned_cols=256  Identities=18%  Similarity=0.203  Sum_probs=189.2

Q ss_pred             ceeEEEEeCC--CccchhhHHHHhhhCCCCCcEEEEEEeCcccHHHHHHHHHhccCCCceEEEeeeccchhccccccchh
Q 009572          226 LYHFCVFSDN--ILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVL  303 (532)
Q Consensus       226 ~~hIa~~sDn--vl~~sV~I~Sil~N~~~p~~i~FHIvtd~is~~~~~~wf~~n~~~~a~I~v~~i~~f~wl~~~y~p~l  303 (532)
                      .+|||+++|+  +.+++|+|+|++.|+++ ++++|||++++++.+..+.+...-...+.+|++..+.+ +          
T Consensus         5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~-~----------   72 (276)
T 3tzt_A            5 ADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATD-D----------   72 (276)
T ss_dssp             CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC-------------
T ss_pred             eEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCH-H----------
Confidence            4899999997  78999999999999986 57999999999999887665443333345666554321 0          


Q ss_pred             hhccccCcceeeecCCCCCCCCCcccCCCCcchhhhhHHHhhhhhcCC-CCeEEEEecceeeccCchHHhccCCCCCeeE
Q 009572          304 KQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPA-LKKVVFLDDDVVVQKDLSALFSINLNGNVNG  382 (532)
Q Consensus       304 ~ql~~~~~~~~~F~~~~~~~~~~lk~r~~~~lS~~ty~Rf~lPellP~-ldKVLYLD~DvIV~~DLseLw~iDL~g~~ia  382 (532)
                                 .|..      .+    ..+++|..+|+||++|+++|+ ++||||||+|+||++||++||++|++|+.+|
T Consensus        73 -----------~~~~------~~----~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~a  131 (276)
T 3tzt_A           73 -----------LFSF------AK----VTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILA  131 (276)
T ss_dssp             --------------------------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEE
T ss_pred             -----------HHhc------Cc----cccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEE
Confidence                       0110      11    124688999999999999995 9999999999999999999999999999999


Q ss_pred             eeeccchh-hhhhhcccCCCCccccccCCCCCCccccceeeeechHHHHhhHHHHHHHHHHhcCCcccccCCCCChhhhh
Q 009572          383 AVETCMET-FHRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLT  461 (532)
Q Consensus       383 AV~Dc~~~-~~~~~~~ln~s~p~i~~~~~~~~~yfNsGVlLiNL~~wR~~nit~~~~~~~~~~~d~~l~~~~~L~~~n~~  461 (532)
                      ||+||... +.+....+         +++...||||||||||||++||+.++++++++|++.++...  ..++|+++|.+
T Consensus       132 av~d~~~~~~~~~~~~~---------~l~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~~--~~~DQd~LN~~  200 (276)
T 3tzt_A          132 AASHTGKTDMANNVNRI---------RLGTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHMNL--LLPDQDILNAM  200 (276)
T ss_dssp             EEEC-----------------------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHH
T ss_pred             EEEecccchHHHHHHHh---------cCCCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccccc--cCCChhHHHHH
Confidence            99999743 11111111         24444699999999999999999999999999998766432  34678999999


Q ss_pred             ccCceeecCC-ccccccCCCC-C--------Cc-hhhcCCCeEEEccCCCCCcccCCCCCCHHHHHHHHhcCCccc
Q 009572          462 FYGLTEPLNP-AWHVLGLGYT-N--------VD-PQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYNHPQL  526 (532)
Q Consensus       462 F~~~i~~L~~-~WN~~~lgy~-~--------~~-~~~~~~~~IIHy~G~~KPW~~~~~~~y~~~W~kY~~~t~pfl  526 (532)
                      |.|++++||. +||++.. +. .        .. .+..++|+||||+|+.|||...+.++|+++||+|++..+++|
T Consensus       201 f~~~~~~Lp~~~wN~~~~-~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~~~w~~Y~~~~~~~~  275 (276)
T 3tzt_A          201 YGDRIYPLDDLIYNYDAR-NYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHRNKFTSLYKHYMSLTKRYL  275 (276)
T ss_dssp             HGGGEEEEEHHHHSEETT-CHHHHHHHTTTCCSHHHHHHHCCEEECCSSCCTTSTTCCSTTHHHHHHHHHHHHHHT
T ss_pred             HhCCEEECCchheeeecc-cchhhhccccchhhhhhhccCCeEEEECCCCCCcCCCCCCchHHHHHHHHHHHHHhh
Confidence            9999999998 9999863 22 0        01 235678999999999999999999999999999999887765

PyMOL of 3tzt

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*	Back alignment and structure

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*	Back alignment and structure

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		532
d1ga8a_		282	c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri	1e-27
d1ll2a_		263	c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun	2e-04

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  110 bits (274), Expect = 1e-27
 Identities = 52/307 (16%), Positives = 100/307 (32%), Gaps = 60/307 (19%)

Query: 229 FCVFSDN-ILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQ 287
                DN      V   S  +   + + I FH++   I+ A   A  A     G  +   
Sbjct: 4   VFAADDNYAAYLCVAAKSVEAAHPDTE-IRFHVLDAGISEANRAAVAANLRGGGGNIRFI 62

Query: 288 KFEDFKWLNASYVPVLKQLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPE 347
                 +                                    N +++S+  + R  + E
Sbjct: 63  DVNPEDFAG-------------------------------FPLNIRHISITTYARLKLGE 91

Query: 348 VFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAV-ETCMETFHRYHKYLNYSHPLIR 406
                 KV++LD DV+V+  L+ L+  +L  N  GA  +  +E    Y + +  +     
Sbjct: 92  YIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGE-- 149

Query: 407 EHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLT 466
                    +  G+ + +L +WR+ ++  +   W E+  D   ++   +  GL  F G  
Sbjct: 150 -------YYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGL--FKGGV 200

Query: 467 EPLNPAWHVLGLGYTNVD---------------PQLIEKGAVLHYNGNSKPWLKIGMEKY 511
              N  ++ +   Y  +                   +   AV HY G +KPW +      
Sbjct: 201 CYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWG 260

Query: 512 KPLWEKY 518
              + + 
Sbjct: 261 AERFTEL 267

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		532
d1ga8a_		282	Galactosyltransferase LgtC {Neisseria meningitidis	100.0
d1ll2a_		263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	99.93
d1o7qa_		287	alpha-1,3-galactosyltransferase catalytic domain {	82.69

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=4.3e-42  Score=342.47  Aligned_cols=253  Identities=21%  Similarity=0.262  Sum_probs=199.6

Q ss_pred             eeEEEEeCC--CccchhhHHHHhhhCCCCCcEEEEEEeCcccHHHHHHHHHhccCCCceEEEeeeccchhccccccchhh
Q 009572          227 YHFCVFSDN--ILATSVVVNSTASNSKNPDMIVFHLVTDEINYAAMKAWFAINSFRGVTVEVQKFEDFKWLNASYVPVLK  304 (532)
Q Consensus       227 ~hIa~~sDn--vl~~sV~I~Sil~N~~~p~~i~FHIvtd~is~~~~~~wf~~n~~~~a~I~v~~i~~f~wl~~~y~p~l~  304 (532)
                      ||||+++|+  +.+++|+|+|++.|+++ .+++|||++++++.+..+.+...-...+.++.+..+++-.           
T Consensus         1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~-----------   68 (282)
T d1ga8a_           1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPED-----------   68 (282)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGG-----------
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCHHHHHHHHHHHHHcCCeEEEEECCchH-----------
Confidence            689999997  78999999999998876 4799999999999998877655433345555554332100           


Q ss_pred             hccccCcceeeecCCCCCCCCCcccCCCCcchhhhhHHHhhhhhcCCCCeEEEEecceeeccCchHHhccCCCCCeeEee
Q 009572          305 QLQDSETQSYYFSGNSDGGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSINLNGNVNGAV  384 (532)
Q Consensus       305 ql~~~~~~~~~F~~~~~~~~~~lk~r~~~~lS~~ty~Rf~lPellP~ldKVLYLD~DvIV~~DLseLw~iDL~g~~iaAV  384 (532)
                                 |..      .+.   ..+++|.++|+||++|++||+++||||||+|+||++||++||++|++++.+||+
T Consensus        69 -----------~~~------~~~---~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~  128 (282)
T d1ga8a_          69 -----------FAG------FPL---NIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGAS  128 (282)
T ss_dssp             -----------GTT------SCC---CCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEE
T ss_pred             -----------hcc------ccc---cccccCHHHHHHHHHhhhCCccceEEEecCCEEEecchHHHHhcccccceeeee
Confidence                       000      011   235788999999999999999999999999999999999999999999999999


Q ss_pred             eccchhh-hhhhcccCCCCccccccCCCCCCccccceeeeechHHHHhhHHHHHHHHHHhcCCcccccCCCCChhhhhcc
Q 009572          385 ETCMETF-HRYHKYLNYSHPLIREHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFY  463 (532)
Q Consensus       385 ~Dc~~~~-~~~~~~ln~s~p~i~~~~~~~~~yfNsGVlLiNL~~wR~~nit~~~~~~~~~~~d~~l~~~~~L~~~n~~F~  463 (532)
                      .|+.... ..+...+         ++.+..+||||||||+|+++||++++++++.++++++.....  .++|+.+|.+|.
T Consensus       129 ~d~~~~~~~~~~~~~---------~~~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~~~~~--~~DQd~LN~~f~  197 (282)
T d1ga8a_         129 IDLFVERQEGYKQKI---------GMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQ--YQDQDILNGLFK  197 (282)
T ss_dssp             ECHHHHTSTTHHHHT---------TCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCS--STHHHHHHHHHT
T ss_pred             hhhhhhhhhhhHHHh---------CCCCCCceeecceeeechhhhhhhhHHHHHHHHHHhcccCcc--cCchhHHHHHhc
Confidence            9975321 1122223         244568999999999999999999999999999987665432  356888999999


Q ss_pred             CceeecCCccccccCCCC---C----C--c------hhhcCCCeEEEccCCCCCcccCCCCCCHHHHHHHHhcC
Q 009572          464 GLTEPLNPAWHVLGLGYT---N----V--D------PQLIEKGAVLHYNGNSKPWLKIGMEKYKPLWEKYVDYN  522 (532)
Q Consensus       464 ~~i~~L~~~WN~~~lgy~---~----~--~------~~~~~~~~IIHy~G~~KPW~~~~~~~y~~~W~kY~~~t  522 (532)
                      |++..||.+||++..+|.   .    .  .      .+...+++||||+|+.|||...+.+.+.+.|++|+...
T Consensus       198 ~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~~~~~~~~~~~~~~  271 (282)
T d1ga8a_         198 GGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSL  271 (282)
T ss_dssp             TSEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCSTTTHHHHHHHTTC
T ss_pred             CCEEeCCHHHeeccccccccccccccccchhhhhhhhhccCCCEEEeeCCCCCCCCCCCCChhHHHHHHHHHhh
Confidence            999999999999854322   0    0  0      23457899999999999999999889999999998764

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure