Citrus Sinensis ID: 009674

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
Protein Sequence
MLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccEEEccHHHHcccccccEEEcccHHHHHHHcccccccccHHHHHHHHcccccccHHHHHHHHHcccccccccccccEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEEcccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHcccccEEEEEcccccEEEEEEccccHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHcccHHHcccEEEEEcccccccEEEEEcccccHHHHHccccccEEEEcccccccccccccEEEEcccccccccccccccccccccccEEEEHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccEEccHHHHHHccccHEEEccccHcHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHccccHHcccccccccEEEEEEcccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEHHHHccccEEEEEEcccccEccccHHHHHHHHHHHHHHHHHHHcccEEEEEHHHccHHHHccccEEEEEccccccEEEEEcccHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHccHHHHHHEEEEccccccccEEEEEEccccHHHHHHcccccEEEEcccccHHHHHcHcccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mlippsysnlrfwrsdGVILTILVHMGPVEFLYYWFHRALHHHYLysryhshhhssvvtepitsviHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFmnnmghcnfefipmwlftvfpplkflmytpsyhslhhtqfrtnyslfmpiydyiygtidrssdsVYEKSLkrsgeeeeesaddvdvvhlthlttpesiYHLRIGFaslaskphrytYTLSQWYLQLLWPFTASCSVLVSWIYGrtfvsesntldklklqtwVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLlnqgeelnrngeiylerqpnklkikvVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTsyaahktkiwlvgddltgkeqarapkgtifipytqipprklrkdcfyhstpamiippslsnmhsceNWLGRRVMSAWRIAGIIHALegwdlnecgqtmcDIHQVWHAslrhgfrplfpva
Flexible Loop (DISEMBL)
mlippsysnlrfWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRsgeeeeesaddvdvVHLTHLttpesiyhLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVsesntldklklqtwvVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLstsyaahktkiWLVGDDLTGKeqarapkgtifipytqipprkLRKDCFYHStpamiippslsNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Low Complexity Region (SEG)
MLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFhralhhhylysryhshhhssVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGeeeeeSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGtvtankvanavaSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Disordered region (IsUnstruct)
******YSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTID************************VDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLF***
Disordered Region (DISOPRED)
MLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDS**************ESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD************AQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLF***
Disordered Region (DISEMBL)
MLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSS*********************VDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Disordered Region (DISPRO)
MLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFP**
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	529	2.2.26 [Sep-21-2011]
F4HVY0	625	Protein ECERIFERUM 1 OS=A	yes	no	0.956	0.809	0.631	0.0
F4HVX7	627	Protein CER1-like 1 OS=Ar	no	no	0.956	0.807	0.590	1e-168
F4IR05	613	Protein CER1-like 2 OS=Ar	no	no	0.930	0.802	0.576	1e-163
Q8H1Z0	632	Protein ECERIFERUM 3 OS=A	no	no	0.948	0.794	0.371	1e-91
Q8J207	356	C-5 sterol desaturase OS=	N/A	no	0.266	0.396	0.266	6e-08
Q6ZNB7	445	Alkylglycerol monooxygena	yes	no	0.234	0.278	0.300	3e-06
Q7SBB6	344	Probable C-5 sterol desat	N/A	no	0.266	0.409	0.24	4e-05
Q8BS35	447	Alkylglycerol monooxygena	yes	no	0.234	0.277	0.274	7e-05
Q5M8F9	446	Alkylglycerol monooxygena	yes	no	0.236	0.280	0.263	8e-05
A0JPQ8	447	Alkylglycerol monooxygena	no	no	0.234	0.277	0.274	0.0001

>sp|F4HVY0|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER1 PE=1 SV=1

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/524 (63%), Positives = 419/524 (79%), Gaps = 18/524 (3%)

Query: 5   PSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS 64
           P    L +WR+DGV++  L+H GPVEFLYYW H+ALHHH+LYSRYHSHHHSS+VTEPITS
Sbjct: 114 PEAKQLPWWRTDGVLMAALIHTGPVEFLYYWLHKALHHHFLYSRYHSHHHSSIVTEPITS 173

Query: 65  VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 124
           VIHPFAEHI YF+LFAIPL+TT++ K ASI SF GYIIY+DFMNNMGHCNFE IP  LF 
Sbjct: 174 VIHPFAEHIAYFILFAIPLLTTLLTKTASIISFAGYIIYIDFMNNMGHCNFELIPKRLFH 233

Query: 125 VFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEE 184
           +FPPLKFL YTPSYHSLHHTQFRTNYSLFMP+YDYIYGT+D S+D++YEK+L+R      
Sbjct: 234 LFPPLKFLCYTPSYHSLHHTQFRTNYSLFMPLYDYIYGTMDESTDTLYEKTLERGD---- 289

Query: 185 ESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLV 244
              D VDVVHLTHLTTPESIYHLRIG AS AS P  Y     +W+++LLWPFT S S++ 
Sbjct: 290 ---DIVDVVHLTHLTTPESIYHLRIGLASFASYPFAY-----RWFMRLLWPFT-SLSMIF 340

Query: 245 SWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVI 304
           +  Y R FV+E N+ +KL LQ+WV+PRY +QY L WR+EAIN++IE+AILEAD KGVKV+
Sbjct: 341 TLFYARLFVAERNSFNKLNLQSWVIPRYNLQYLLKWRKEAINNMIEKAILEADKKGVKVL 400

Query: 305 SLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTA 364
           SLGL+NQGEELNRNGE+Y+   P+ +K+++VDGS LAAAVV+NS+PK T  V++ G +T 
Sbjct: 401 SLGLMNQGEELNRNGEVYIHNHPD-MKVRLVDGSRLAAAVVINSVPKATTSVVMTGNLT- 458

Query: 365 NKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDD 424
            KVA  +AS+LCQ G++V+T+  D+YEK++  +P E + +LV  TS A    K+WLVG+ 
Sbjct: 459 -KVAYTIASALCQRGVQVSTLRLDEYEKIRSCVPQECRDHLVYLTSEALSSNKVWLVGEG 517

Query: 425 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMS 484
            T +EQ +A KGT+FIP++Q P ++LR+DC YH+TPA+I+P SL N+HSCENWL R+ MS
Sbjct: 518 TTREEQEKATKGTLFIPFSQFPLKQLRRDCIYHTTPALIVPKSLVNVHSCENWLPRKAMS 577

Query: 485 AWRIAGIIHALEGWDLNECGQT--MCDIHQVWHASLRHGFRPLF 526
           A R+AGI+HALEGW+++ECG +  + D+ QVW A L HGF+PL 
Sbjct: 578 ATRVAGILHALEGWEMHECGTSLLLSDLDQVWEACLSHGFQPLL 621

Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex. Involved in epicuticular wax biosynthesis and pollen fertility.
Arabidopsis thaliana (taxid: 3702)

>sp|F4HVX7|CERL1_ARATH Protein CER1-like 1 OS=Arabidopsis thaliana GN=At1g02190 PE=2 SV=1

 Score =  592 bits (1526), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 312/528 (59%), Positives = 390/528 (73%), Gaps = 22/528 (4%)

Query: 5   PSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS 64
           P  S+L  WR DG IL  L+H GPVEFLYYWFHRALHHH+LYSRYHSHHHSS+VTEPITS
Sbjct: 114 PGASHLPPWRLDGAILMALLHAGPVEFLYYWFHRALHHHFLYSRYHSHHHSSIVTEPITS 173

Query: 65  VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 124
           V+HPFAEHI Y LLFAIP+VT  +    SI S +GYI Y+DFMNNMGHCNFE  P  LF 
Sbjct: 174 VVHPFAEHIAYTLLFAIPMVTASLCGILSIVSIMGYITYIDFMNNMGHCNFELFPKRLFH 233

Query: 125 VFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEE 184
           +FPPLKFL YTPS+HSLHHTQFRTNYSLFMPIYD+IYGT D  +DS+YE+SL    E EE
Sbjct: 234 LFPPLKFLCYTPSFHSLHHTQFRTNYSLFMPIYDFIYGTTDNLTDSLYERSL----EIEE 289

Query: 185 ESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQ-LLWPFTASCS-V 242
           ES    DV+HLTHLTT  SIY +R+GF SL+S P    ++   WYL   +WPFT  CS  
Sbjct: 290 ESP---DVIHLTHLTTHNSIYQMRLGFPSLSSCP---LWSRPPWYLTCFMWPFTLLCSFA 343

Query: 243 LVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVK 302
           L S I  RTFV E N L  L + + ++P++   Y      E+IN++IEEAILEAD KGVK
Sbjct: 344 LTSAIPLRTFVFERNRLRDLTVHSHLLPKFSFHYKSQRHHESINTIIEEAILEADEKGVK 403

Query: 303 VISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTV 362
           V+SLGL+N  EELN +GE+Y+++ P KLKI++VDGSS+AA VV+N++PK    ++ RG +
Sbjct: 404 VMSLGLMNNREELNGSGEMYVQKYP-KLKIRLVDGSSMAATVVINNIPKEATEIVFRGNL 462

Query: 363 TANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVG 422
           T  KVA+AV  +LCQ G+KV  + ++++ KL   I      NLVLSTS + +  K+WLVG
Sbjct: 463 T--KVASAVVFALCQKGVKVVVLREEEHSKL---IKSGVDKNLVLSTSNSYYSPKVWLVG 517

Query: 423 DDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRV 482
           D +  +EQ +A +GT+F+P++  PP KLRKDCFY STPAM +P S  N+ SCENWLGRRV
Sbjct: 518 DGIENEEQMKAKEGTLFVPFSHFPPNKLRKDCFYQSTPAMRVPKSAQNIDSCENWLGRRV 577

Query: 483 MSAWRIAGIIHALEGWDLNECGQTMCDI---HQVWHASLRHGFRPLFP 527
           MSAW+I GI+HALEGW+ ++CG T C++   H +W A+LRH F+PL P
Sbjct: 578 MSAWKIGGIVHALEGWEEHDCGNT-CNVLRLHAIWEAALRHDFQPLPP 624

Arabidopsis thaliana (taxid: 3702)

>sp|F4IR05|CERL2_ARATH Protein CER1-like 2 OS=Arabidopsis thaliana GN=At2g37700 PE=2 SV=1

 Score =  573 bits (1478), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 301/522 (57%), Positives = 375/522 (71%), Gaps = 30/522 (5%)

Query: 8   SNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIH 67
           S + FWR+DGVIL  L+H GPVEF+YYWFHRALHHH+LYSRYHSHHHSS+VTEPITSV+H
Sbjct: 113 STIPFWRTDGVILVALLHAGPVEFIYYWFHRALHHHFLYSRYHSHHHSSIVTEPITSVVH 172

Query: 68  PFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFP 127
           PFAEHI Y L+  +PL+TT +    S+ S   Y+ Y+DFMNNMGHCNFE IP +LF++ P
Sbjct: 173 PFAEHIGYTLILGLPLITTFMCGTVSVVSIALYLTYIDFMNNMGHCNFELIPKFLFSLLP 232

Query: 128 PLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESA 187
           PLKFL YTPS+HSLHHTQFRTNYSLFMP+YDYIYGT D  SDS+YE SL    E+EEE  
Sbjct: 233 PLKFLCYTPSFHSLHHTQFRTNYSLFMPMYDYIYGTTDECSDSLYETSL----EKEEEKP 288

Query: 188 DDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWI 247
              D +HLTHLT+ +SIYHLR+GFASL+S P       S+ YL L+ PF    S ++   
Sbjct: 289 ---DAIHLTHLTSLDSIYHLRLGFASLSSHPLS-----SRCYLFLMKPFALILSFILRSF 340

Query: 248 YGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLG 307
             +TFV E N    L L + ++P++   Y    ++E IN +IE AILEAD KGVKV+SLG
Sbjct: 341 SFQTFVVERNRFRDLTLHSHLLPKFSSHYMSHQQKECINKMIEAAILEADKKGVKVMSLG 400

Query: 308 LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKV 367
           LLNQGEELN  GE+Y+ R P KLKI++VDG SLAA VV++S+P  T  VL RG +T  KV
Sbjct: 401 LLNQGEELNGYGEMYVRRHP-KLKIRIVDGGSLAAEVVLHSIPVGTKEVLFRGQIT--KV 457

Query: 368 ANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTG 427
           A A+  SLCQ  IKV  + K+++  L   +  + + NL            IWLVGD L+ 
Sbjct: 458 ARAIVFSLCQNAIKVMVLRKEEHSMLAEFLDDKCKENL------------IWLVGDGLST 505

Query: 428 KEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWR 487
           KEQ  A  GT+F+P++Q PP+ LRKDCFYH+TPAMIIP S  N+ SCENWLGRRVMSAWR
Sbjct: 506 KEQKMAKDGTLFLPFSQFPPKTLRKDCFYHTTPAMIIPHSAQNIDSCENWLGRRVMSAWR 565

Query: 488 IAGIIHALEGWDLNECG---QTMCDIHQVWHASLRHGFRPLF 526
           + GI+HALEGW  +ECG    ++ +  +VW A+LR+GF+PL 
Sbjct: 566 VGGIVHALEGWKEHECGLDDNSIINPPRVWEAALRNGFQPLL 607

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H1Z0|CER3_ARATH Protein ECERIFERUM 3 OS=Arabidopsis thaliana GN=CER3 PE=1 SV=1

 Score =  337 bits (865), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 193/520 (37%), Positives = 295/520 (56%), Gaps = 18/520 (3%)

Query: 8   SNLRFWRSDGVILTILVHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVI 66
           ++L  W + G+I  I++H+   E LYY+ HR+ H ++Y ++ YHS HHSS V  P+T+  
Sbjct: 118 NSLPLWNTKGLIALIVLHVTFSEPLYYFLHRSFHRNNYFFTHYHSFHHSSPVPHPMTAGN 177

Query: 67  HPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVF 126
               E+I+  ++  +PL+   +    S+++  GY +  DFM  +GHCN E     LF + 
Sbjct: 178 ATLLENIILCVVAGVPLIGCCLFGVGSLSAIYGYAVMFDFMRCLGHCNVEIFSHKLFEIL 237

Query: 127 PPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEES 186
           P L++L+YTP+YHSLHH +  TN+ LFMP++D +  T + +S  + +K    +GE +   
Sbjct: 238 PVLRYLIYTPTYHSLHHQEMGTNFCLFMPLFDVLGDTQNPNSWELQKKIRLSAGERKRVP 297

Query: 187 ADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSW 246
               + V L H     S  H    F S AS P+      ++ +L  +WPFT  C +L  W
Sbjct: 298 ----EFVFLAHGVDVMSAMHAPFVFRSFASMPYT-----TRIFLLPMWPFTF-CVMLGMW 347

Query: 247 IYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISL 306
            + +TF+    TL     QTW VPR+  QY LP+  + IN  IE AIL AD  GVKVISL
Sbjct: 348 AWSKTFLFSFYTLRNNLCQTWGVPRFGFQYFLPFATKGINDQIEAAILRADKIGVKVISL 407

Query: 307 GLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANK 366
             LN+ E LN  G +++ + P+ L+++VV G++L AAV++  +PK    V L G  +  K
Sbjct: 408 AALNKNEALNGGGTLFVNKHPD-LRVRVVHGNTLTAAVILYEIPKDVNEVFLTGATS--K 464

Query: 367 VANAVASSLCQMGIKV--ATICKDDYEKLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGD 423
           +  A+A  LC+ G++V   T+  + ++K++   PVE Q+NLV  T Y AA   K W+VG 
Sbjct: 465 LGRAIALYLCRRGVRVLMLTLSMERFQKIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGK 524

Query: 424 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 483
            LT +EQ+ AP GT F  +   P  K R++C Y    AM +P  +  + +CE  + R V+
Sbjct: 525 WLTPREQSWAPAGTHFHQFVVPPILKFRRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVV 584

Query: 484 SAWRIAGIIHALEGWDLNECGQTMCD-IHQVWHASLRHGF 522
            A    G++H LEGW  +E G    D I  VW A++++G 
Sbjct: 585 HACHAGGVVHMLEGWKHHEVGAIDVDRIDLVWEAAMKYGL 624

Involved in cuticule membrane and wax production, and in the typhine and sopropollenin biosynthesis of pollen. May act as an aldehyde-generating acyl-CoA reductase.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8J207|ERG3_LEPMC C-5 sterol desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1

 Score = 59.7 bits (143), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 24/165 (14%)

Query: 34  YWFHRALHHHYLYSRYHSHHHSSVVTEPITS-VIHP---FAEHIVYFLL-FAIPLVTTMV 88
           YW HR LHH  +Y   H  HH  ++  P  S   HP   +A+ + Y++  F  PL     
Sbjct: 189 YWIHRGLHHPMVYKHIHKPHHKWIMPTPFASHAFHPIDGYAQGLPYYIFPFLFPLS---- 244

Query: 89  LKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRT 148
            K AS+A FV   I+   +++  + +   I              +   + H++HH  F  
Sbjct: 245 -KIASVAFFVFVNIWTVLIHDGEYAHNSPI--------------INGAACHTMHHLYFNY 289

Query: 149 NYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVV 193
           NY  F  ++D + G+  + +D ++++ LK   +E  + A  VD++
Sbjct: 290 NYGQFTTLWDRLGGSYRKPNDELFKRELKMCQDEWNKQAKAVDMM 334

Catalyzes the introduction of a C-5 double bond in the B ring of ergosterol. May contribute to the regulation of ergosterol biosynthesis.

Leptosphaeria maculans (taxid: 5022)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: -

>sp|Q6ZNB7|ALKMO_HUMAN Alkylglycerol monooxygenase OS=Homo sapiens GN=AGMO PE=1 SV=1

 Score = 53.9 bits (128), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 29/153 (18%)

Query: 29  VEFLYYWFHRALHHHYLYSRYHSHHHSS----VVTEPITSVIHPFAEHIVY--FLLFAIP 82
           V+F YYWFHR  H   +    H  HHSS    + T    SV+  +   I Y    LF  P
Sbjct: 124 VDFGYYWFHRMAHEVNIMWAGHQTHHSSEDYNLSTALRQSVLQIYTSWIFYSPLALFIPP 183

Query: 83  LVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLH 142
            V  + L+   +  F    I+ + +NN+G                PL+ ++ TPS+H +H
Sbjct: 184 SVYAVHLQFNLLYQF---WIHTEVINNLG----------------PLELILNTPSHHRVH 224

Query: 143 HTQFR----TNYSLFMPIYDYIYGTIDRSSDSV 171
           H + R     NY+  + I+D I+GT +  ++ V
Sbjct: 225 HGRNRYCIDKNYAGVLIIWDKIFGTFEAENEKV 257

Glyceryl-ether monooxygenase that cleaves the O-alkyl bond of ether lipids. Ether lipids are essential components of brain membranes.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 5

>sp|Q7SBB6|ERG3_NEUCR Probable C-5 sterol desaturase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06207 PE=3 SV=1

 Score = 50.4 bits (119), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 34/175 (19%)

Query: 29  VEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS-VIHP---FAEHIVYFLL-FAIPL 83
            +F  YW HR LHH  +Y   H  HH  ++  P  S   HP   FA+ I Y +  F  PL
Sbjct: 173 TDFGIYWIHRGLHHPLVYKHLHKPHHKWIMPTPYASHAFHPIDGFAQSIPYHIFPFIFPL 232

Query: 84  VTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTP-----SY 138
                       ++VG  ++++F   M H                 ++    P     + 
Sbjct: 233 ---------QKMAYVGLFVFINFWTIMIHDG---------------EYYANNPVINGAAC 268

Query: 139 HSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVV 193
           HS+HH  F  NY  F  ++D + G+       ++ K  K S    ++  ++++ +
Sbjct: 269 HSVHHFAFNYNYGQFTTLWDRLGGSYREPDGDMFAKEKKMSTTTWKKQVNEMEKI 323

Catalyzes the introduction of a C-5 double bond in the B ring of ergosterol. May contribute to the regulation of ergosterol biosynthesis.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: -

>sp|Q8BS35|ALKMO_MOUSE Alkylglycerol monooxygenase OS=Mus musculus GN=Agmo PE=2 SV=1

 Score = 49.3 bits (116), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 29/153 (18%)

Query: 29  VEFLYYWFHRALHHHYLYSRYHSHHHSS----VVTEPITSVIHPFAEHIVY--FLLFAIP 82
           V+F YYWFHR  H   ++   H  HHSS    + T    SV+  ++  + Y    LF  P
Sbjct: 124 VDFGYYWFHRMAHEINIFWAAHQAHHSSEDYNLSTALRQSVLQQYSSWVFYCPLALFIPP 183

Query: 83  LVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLH 142
            V  + ++   +  F    I+ + +  +G                PL+ ++ TPS+H +H
Sbjct: 184 SVFAVHIQFNLLYQF---WIHTEIIRTLG----------------PLEVILNTPSHHRVH 224

Query: 143 HTQFR----TNYSLFMPIYDYIYGTIDRSSDSV 171
           H + R     NY+  + I+D I+GT +  ++ V
Sbjct: 225 HGRNRYCIDKNYAGTLIIWDRIFGTFEAENEQV 257

Glyceryl-ether monooxygenase that cleaves the O-alkyl bond of ether lipids. Ether lipids are essential components of brain membranes.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 5

>sp|Q5M8F9|ALKMO_XENTR Alkylglycerol monooxygenase OS=Xenopus tropicalis GN=agmo PE=2 SV=1

 Score = 49.3 bits (116), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 27/152 (17%)

Query: 29  VEFLYYWFHRALHHHYLYSRYHSHHHSS----VVTEPITSVIHPFAEHIVYF-LLFAIPL 83
           V+F YYWFHR  H   +    H  HHSS    + T    S I  +   + Y+ + F IP 
Sbjct: 123 VDFGYYWFHRMAHEVNIMWAGHQTHHSSEDYNLTTALRQSFIQKYFSWMFYWPMAFCIP- 181

Query: 84  VTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHH 143
             ++   +        + I+ + +NN+G                PL++++ TPS+H +HH
Sbjct: 182 -PSVFAVHIQFNLLYQFWIHTELINNLG----------------PLEWILNTPSHHRVHH 224

Query: 144 TQ----FRTNYSLFMPIYDYIYGTIDRSSDSV 171
            +      +NY+  + I+D ++GT     + V
Sbjct: 225 GRNPYCIDSNYAGTLIIWDRMFGTFVPEKEKV 256

Glyceryl-ether monooxygenase that cleaves the O-alkyl bond of ether lipids. Ether lipids are essential components of brain membranes.

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 5

>sp|A0JPQ8|ALKMO_RAT Alkylglycerol monooxygenase OS=Rattus norvegicus GN=Agmo PE=2 SV=1

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 29/153 (18%)

Query: 29  VEFLYYWFHRALHHHYLYSRYHSHHHSS----VVTEPITSVIHPFAEHIVY--FLLFAIP 82
           V+F YYWFHR  H   +    H  HHSS    + T    SV+  ++  + Y    LF  P
Sbjct: 124 VDFGYYWFHRMAHEINIIWAAHQAHHSSEDYNLSTALRQSVLQQYSSWVFYCPLALFVPP 183

Query: 83  LVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLH 142
            V  + ++   +  F    I+ + +  +G                PL+ ++ TPS+H +H
Sbjct: 184 SVFAVHIQFNLLYQF---WIHTEVIRTLG----------------PLELVLNTPSHHRVH 224

Query: 143 HTQFR----TNYSLFMPIYDYIYGTIDRSSDSV 171
           H + R     NY+  + I+D I+GT +  ++ V
Sbjct: 225 HGRNRYCIDKNYAGTLIIWDRIFGTFEAENEQV 257

Glyceryl-ether monooxygenase that cleaves the O-alkyl bond of ether lipids. Ether lipids are essential components of brain membranes.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	529
359489252	619	PREDICTED: protein WAX2-like [Vitis vini	0.948	0.810	0.656	0.0
359489254	619	PREDICTED: protein WAX2-like [Vitis vini	0.948	0.810	0.656	0.0
297734710	631	unnamed protein product [Vitis vinifera]	0.945	0.792	0.653	0.0
356520717	624	PREDICTED: protein WAX2-like [Glycine ma	0.954	0.809	0.651	0.0
359489250	619	PREDICTED: protein WAX2-like [Vitis vini	0.954	0.815	0.643	0.0
356504497	627	PREDICTED: protein WAX2-like [Glycine ma	0.954	0.805	0.649	0.0
449432335	624	PREDICTED: protein ECERIFERUM 1-like [Cu	0.941	0.798	0.653	0.0
359489248	619	PREDICTED: protein WAX2-like [Vitis vini	0.954	0.815	0.643	0.0
225454042	620	PREDICTED: protein WAX2 [Vitis vinifera]	0.954	0.814	0.632	0.0
1209703	625	maize gl1 homolog [Arabidopsis thaliana]	0.950	0.804	0.631	0.0

>gi|359489252|ref|XP_002263787.2| PREDICTED: protein WAX2-like [Vitis vinifera]

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/521 (65%), Positives = 419/521 (80%), Gaps = 19/521 (3%)

Query: 5   PSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS 64
           P  S++  WR+DGV++TIL+H GPVEFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITS
Sbjct: 114 PGASHMPLWRADGVVVTILLHTGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITS 173

Query: 65  VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 124
           VIHPFAEHI YFLLF+IPL+T +     SI SFVGYI Y+DFMNNMGHCNFE +P WLF+
Sbjct: 174 VIHPFAEHIGYFLLFSIPLLTVIFTGTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLFS 233

Query: 125 VFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEE 184
           +FP LK+LMYTPS+HSLHHTQFRTNYSLFMP YDY+YGT+D+SSD +YEKSL R     E
Sbjct: 234 IFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYMYGTMDKSSDVLYEKSLTRP----E 289

Query: 185 ESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLV 244
           ES    DVVHLTHLTTP+SIYH+R+GFAS+ASKP+     +S+WYL+L+WP T+S  +L+
Sbjct: 290 ESP---DVVHLTHLTTPDSIYHIRLGFASVASKPY-----ISKWYLRLMWPLTSSYMMLI 341

Query: 245 SWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVI 304
            WI  RTFV E N  +KLKLQTWV+P+Y +QY L W+ E INSLIEEAIL+A+ +GV V+
Sbjct: 342 -WICSRTFVLERNHFNKLKLQTWVIPKYRIQYFLKWQNEPINSLIEEAILDAEQRGVNVL 400

Query: 305 SLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTA 364
           SLGLLNQGEELN  GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++ 
Sbjct: 401 SLGLLNQGEELNIYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS- 458

Query: 365 NKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDD 424
            KVA   A +LCQ GI+VAT  +++Y K+ +++  +    L LS +YA    KIWLVGD 
Sbjct: 459 -KVAYFTALALCQKGIQVATFHEEEYAKINMKLNTKLGGKLALSKNYAH---KIWLVGDG 514

Query: 425 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMS 484
           LT +EQ +APKGT+FIP++Q PP+++RKDCFYH+TPAM+ P S  NM SCENWL RR MS
Sbjct: 515 LTKEEQLKAPKGTLFIPFSQFPPKRMRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAMS 574

Query: 485 AWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
           AWR+AGI+HALEGW+++ECG  + DI ++W ASL+HGFRPL
Sbjct: 575 AWRVAGILHALEGWNVHECGHAIFDIEKIWEASLQHGFRPL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489254|ref|XP_002265189.2| PREDICTED: protein WAX2-like [Vitis vinifera] gi|297734711|emb|CBI16762.3| unnamed protein product [Vitis vinifera]

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/521 (65%), Positives = 421/521 (80%), Gaps = 19/521 (3%)

Query: 5   PSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS 64
           P  +++ FWR+DGV++TIL+HMGPVEFLYYWFHRALHHHYLYSRYHSHHHSS+VTEPITS
Sbjct: 114 PGGTHMPFWRADGVVITILLHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSIVTEPITS 173

Query: 65  VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 124
           VIHPFAEHI YFLLF+IPL+T +     SI SFVGYI Y+DFMNNMGHCNFE +P WLF+
Sbjct: 174 VIHPFAEHIGYFLLFSIPLLTVIFTGTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLFS 233

Query: 125 VFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEE 184
           +FP LK+LMYTPS+HSLHHTQFRTNYSLFMP YDYIYGT+D+SSD +YEKSL R     E
Sbjct: 234 IFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTVDKSSDVLYEKSLTRP----E 289

Query: 185 ESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLV 244
           ES    DVVHLTHLTTP+SIYH+R+GFAS+ASKP+     +S+WYL+L+WP T+   +L+
Sbjct: 290 ESP---DVVHLTHLTTPDSIYHMRLGFASVASKPY-----ISKWYLRLMWPLTSWYMMLI 341

Query: 245 SWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVI 304
            WI  RTFV E N  +KLKLQTWV+P+Y +QY L  + E INSLIEEAIL+AD +GVKV+
Sbjct: 342 -WICSRTFVLERNHFNKLKLQTWVIPKYRIQYFLKGQNEPINSLIEEAILDADQRGVKVL 400

Query: 305 SLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTA 364
           SLG+LNQGEELN  GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++ 
Sbjct: 401 SLGILNQGEELNIYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS- 458

Query: 365 NKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDD 424
            KVA   A +LCQ GI+VAT  +++Y  + +++  +    L LS +YA    KIWLVGD 
Sbjct: 459 -KVAYFTALALCQKGIQVATFHEEEYANINMKLNTKLGGKLALSKNYAH---KIWLVGDG 514

Query: 425 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMS 484
           LT +EQ +APKGT+FIP++Q PP+++RKDCFYH+TPAM+ P S  +M SCENWL RR MS
Sbjct: 515 LTEEEQLKAPKGTLFIPFSQFPPKRMRKDCFYHTTPAMMSPTSFEDMDSCENWLPRRAMS 574

Query: 485 AWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
           AWR+AGI+HALEGW+++ECG T+ +I ++W ASL+HGFRPL
Sbjct: 575 AWRVAGILHALEGWNVHECGHTIFNIEKIWEASLQHGFRPL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734710|emb|CBI16761.3| unnamed protein product [Vitis vinifera]

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/519 (65%), Positives = 417/519 (80%), Gaps = 19/519 (3%)

Query: 5   PSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS 64
           P  S++  WR+DGV++TIL+H GPVEFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITS
Sbjct: 114 PGASHMPLWRADGVVVTILLHTGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITS 173

Query: 65  VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 124
           VIHPFAEHI YFLLF+IPL+T +     SI SFVGYI Y+DFMNNMGHCNFE +P WLF+
Sbjct: 174 VIHPFAEHIGYFLLFSIPLLTVIFTGTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLFS 233

Query: 125 VFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEE 184
           +FP LK+LMYTPS+HSLHHTQFRTNYSLFMP YDY+YGT+D+SSD +YEKSL R     E
Sbjct: 234 IFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYMYGTMDKSSDVLYEKSLTRP----E 289

Query: 185 ESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLV 244
           ES    DVVHLTHLTTP+SIYH+R+GFAS+ASKP+     +S+WYL+L+WP T+S  +L+
Sbjct: 290 ESP---DVVHLTHLTTPDSIYHIRLGFASVASKPY-----ISKWYLRLMWPLTSSYMMLI 341

Query: 245 SWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVI 304
            WI  RTFV E N  +KLKLQTWV+P+Y +QY L W+ E INSLIEEAIL+A+ +GV V+
Sbjct: 342 -WICSRTFVLERNHFNKLKLQTWVIPKYRIQYFLKWQNEPINSLIEEAILDAEQRGVNVL 400

Query: 305 SLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTA 364
           SLGLLNQGEELN  GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++ 
Sbjct: 401 SLGLLNQGEELNIYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS- 458

Query: 365 NKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDD 424
            KVA   A +LCQ GI+VAT  +++Y K+ +++  +    L LS +YA    KIWLVGD 
Sbjct: 459 -KVAYFTALALCQKGIQVATFHEEEYAKINMKLNTKLGGKLALSKNYAH---KIWLVGDG 514

Query: 425 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMS 484
           LT +EQ +APKGT+FIP++Q PP+++RKDCFYH+TPAM+ P S  NM SCENWL RR MS
Sbjct: 515 LTKEEQLKAPKGTLFIPFSQFPPKRMRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAMS 574

Query: 485 AWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFR 523
           AWR+AGI+HALEGW+++ECG  + DI ++W ASL+HGF+
Sbjct: 575 AWRVAGILHALEGWNVHECGHAIFDIEKIWEASLQHGFQ 613

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520717|ref|XP_003529007.1| PREDICTED: protein WAX2-like [Glycine max]

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/525 (65%), Positives = 414/525 (78%), Gaps = 20/525 (3%)

Query: 1   MLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTE 60
           ML+P S S++  WR+DGV++T L+H GPVEFLYYW HRALHHH+LYSRYHSHHHSS+VTE
Sbjct: 111 MLVPES-SHMPLWRTDGVLITALLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTE 169

Query: 61  PITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPM 120
           PITSVIHPFAEHI YF+LFAIPL TT+V + ASIAS+ GY+ Y+DFMNN+GHCNFE IP 
Sbjct: 170 PITSVIHPFAEHIAYFVLFAIPLYTTVVARTASIASYAGYLAYIDFMNNLGHCNFECIPK 229

Query: 121 WLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSG 180
            +FT FP LK+LMYTPS+HSLHHTQFRTNYSLFMPIYDYIYGT+D+++D+ YE +LKR  
Sbjct: 230 AIFTAFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTMDKTTDTTYEIALKR-- 287

Query: 181 EEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASC 240
              EES+   DVVHLTHLTTPESIYHLR+GFASLAS+P       S WYL L+WP T   
Sbjct: 288 ---EESSP--DVVHLTHLTTPESIYHLRLGFASLASRPQS-----STWYLSLMWPLTL-W 336

Query: 241 SVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKG 300
           S+LV+W YG+TFV E N    L LQ+WV+PR+ VQY   W+ E +N LIEEAIL+A+   
Sbjct: 337 SILVTWFYGQTFVMERNAFKMLNLQSWVIPRFHVQYLFKWQSETLNKLIEEAILQAELSK 396

Query: 301 VKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRG 360
           VKV+SLGL NQG+  N+ GE+Y++R P +LKIK+VDGSSL  A+VVNS+PK    VLL G
Sbjct: 397 VKVLSLGLSNQGDSFNKYGELYIKRYP-ELKIKIVDGSSLVVAIVVNSIPKEARQVLLCG 455

Query: 361 TVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL 420
               NKV+ A+AS+LC+ G KV T+ KD+Y+KL+LRI  E++ NLV   SY A   KIWL
Sbjct: 456 --KPNKVSYAIASALCERGTKVTTMYKDEYDKLQLRISNESKKNLVFPGSYTA---KIWL 510

Query: 421 VGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGR 480
           VGD     EQ +APKG++FIP +Q PP+KLRKDCFYHSTPAMI PPSL N+ SCENWL R
Sbjct: 511 VGDQCDEVEQKKAPKGSLFIPISQFPPKKLRKDCFYHSTPAMIAPPSLVNVDSCENWLPR 570

Query: 481 RVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
           RVMSAWR+AGI+HALE W +NECG  M  + ++W ASL+HGFRPL
Sbjct: 571 RVMSAWRVAGILHALECWKVNECGNVMFSVEKIWQASLQHGFRPL 615

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489250|ref|XP_003633900.1| PREDICTED: protein WAX2-like [Vitis vinifera]

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/524 (64%), Positives = 419/524 (79%), Gaps = 19/524 (3%)

Query: 2   LIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEP 61
            I P  S++  WR+DGV++TIL+H GPVEFLYYW HRALHHHYLYSRYHSHHHSS+VTEP
Sbjct: 111 FILPGASHMPLWRADGVVITILLHTGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEP 170

Query: 62  ITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMW 121
           ITSVIHPFAEHI YFLLF+IPL+T +  + +S+ +F GYI Y+DFMNNMGHCNFE +P W
Sbjct: 171 ITSVIHPFAEHIGYFLLFSIPLLTMIFTRTSSVVAFFGYISYIDFMNNMGHCNFELVPKW 230

Query: 122 LFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGE 181
           LF++FP LK+LMYTPS+HSLHHTQFRTNYSLFMP YD++YGT+D+SSD +YEKSL R   
Sbjct: 231 LFSIFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDFMYGTMDKSSDVLYEKSLTRP-- 288

Query: 182 EEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCS 241
             EES    DVVHLTHLTTP SIYH+R+GFAS+ASKP+     +S+WYL+L+WP T+S  
Sbjct: 289 --EESP---DVVHLTHLTTPNSIYHIRLGFASVASKPY-----ISKWYLRLMWPLTSSYM 338

Query: 242 VLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 301
           +L+ WI  RTFV E N  +KLK QTWV+P+Y VQY L W+ E INSLIEEAIL A+ +GV
Sbjct: 339 MLI-WICSRTFVLERNHFNKLKSQTWVIPKYRVQYFLKWQNEPINSLIEEAILHAEERGV 397

Query: 302 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGT 361
           KV+SLGLLNQGEELN  G++Y+   P KLKIKVVDGSSLA AVV+NS+PK T  VL RG 
Sbjct: 398 KVLSLGLLNQGEELNLYGKLYIHLNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGK 456

Query: 362 VTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLV 421
           ++  KVA   A +LCQ GI+V T C+++++K+K+++  +    L LS +YA    KIWLV
Sbjct: 457 LS--KVAYFTAIALCQKGIQVTTFCEEEHKKIKMKLNTKLGDKLALSKNYAH---KIWLV 511

Query: 422 GDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR 481
           GD LT +EQ +APKGT+FIP++Q PP+++RKDCFYH+TPAM+ P S  NM SCENWL RR
Sbjct: 512 GDGLTEEEQLKAPKGTLFIPFSQFPPKRMRKDCFYHTTPAMMSPTSFENMDSCENWLPRR 571

Query: 482 VMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
            MSAWR+AGI+HALEGW+++ECG T+ DI ++W AS +HGFR L
Sbjct: 572 AMSAWRVAGILHALEGWNVHECGHTIFDIEKIWEASFQHGFRSL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504497|ref|XP_003521032.1| PREDICTED: protein WAX2-like [Glycine max]

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/525 (64%), Positives = 417/525 (79%), Gaps = 20/525 (3%)

Query: 1   MLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTE 60
           ML+P S S++  WR+DGV++T L+H GPVEFLYYW HRALHHH+LYSRYHSHHHSS+VTE
Sbjct: 111 MLVPES-SHMPLWRTDGVLITALLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTE 169

Query: 61  PITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPM 120
           PITSVIHPFAEHI YF+LFAIPL TT+V + ASIAS+ GY+ Y+DFMNN+GHCNFE IP 
Sbjct: 170 PITSVIHPFAEHIAYFVLFAIPLYTTVVTRTASIASYAGYLAYIDFMNNLGHCNFECIPK 229

Query: 121 WLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSG 180
            +F+ FP LK+LMYTPS+HSLHHTQFRTNYSLFMPIYDYIYGT+D+S+D+ YE +LKR  
Sbjct: 230 AIFSAFPFLKYLMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTMDKSTDTTYEIALKR-- 287

Query: 181 EEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASC 240
              EES    DVVHLTHLTTPESIYHLR+GFASLAS+P       S WYL L+WPFT   
Sbjct: 288 ---EESL--ADVVHLTHLTTPESIYHLRLGFASLASRPQS-----STWYLYLMWPFTL-W 336

Query: 241 SVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKG 300
           SVLV+W YG+TFV E N    L LQ+WV+PR+ VQY   W+ E +N LIEEAIL+A+   
Sbjct: 337 SVLVTWFYGQTFVMERNAFKMLNLQSWVIPRFHVQYLFKWQSETLNKLIEEAILQAELSK 396

Query: 301 VKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRG 360
           VKV+SLGL NQG+ LN+ GE+Y+++ P +LKIK+VDGSSL  A+V+NS+PK  + VLL G
Sbjct: 397 VKVLSLGLSNQGDLLNKYGELYIKKYP-ELKIKIVDGSSLVVAIVLNSIPKEASQVLLCG 455

Query: 361 TVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL 420
               NKV+ A+ S+LC+ G KV T+ KD+Y+KL+LRIP E++ NLV   SY A   KIWL
Sbjct: 456 --KPNKVSYAIVSALCERGTKVTTMYKDEYDKLQLRIPNESKDNLVFPGSYPA---KIWL 510

Query: 421 VGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGR 480
           +GD     +Q +APKG++FIP +Q PP+KLRKDCFYHSTPAMI PPSL N+ SCENWL R
Sbjct: 511 LGDQCNEVDQRKAPKGSLFIPISQFPPKKLRKDCFYHSTPAMIAPPSLVNVDSCENWLPR 570

Query: 481 RVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
           RVMSAWR+AGI+HALEGW++NECG  M  + ++  ASL+HGFRPL
Sbjct: 571 RVMSAWRVAGILHALEGWNVNECGNVMFSVEKIRQASLQHGFRPL 615

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432335|ref|XP_004133955.1| PREDICTED: protein ECERIFERUM 1-like [Cucumis sativus]

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/517 (65%), Positives = 414/517 (80%), Gaps = 19/517 (3%)

Query: 9   NLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHP 68
           NL  WR+DGV++T L+H GPVEFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHP
Sbjct: 118 NLPLWRTDGVVITFLLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHP 177

Query: 69  FAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPP 128
           FAEH+ YFLLFAIP++T +    +S+A ++ Y+ Y+DFMNNMGHCNFE IP  LFT+FPP
Sbjct: 178 FAEHLTYFLLFAIPMLTVLFTGISSLAVYIFYLTYIDFMNNMGHCNFEIIPNRLFTLFPP 237

Query: 129 LKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESAD 188
           LK+ +YTPS+HSLHHTQFRTNYSLFMP+YDYIYGT+D SSDS+YEKSLKR    EEE A 
Sbjct: 238 LKYFLYTPSFHSLHHTQFRTNYSLFMPLYDYIYGTLDNSSDSLYEKSLKR----EEEVA- 292

Query: 189 DVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIY 248
             DVVHLTHLTTPESIYHLR+GFA LAS+PH      S WY  LL P T   S+L++WIY
Sbjct: 293 --DVVHLTHLTTPESIYHLRLGFADLASRPHT-----STWYTWLLSPITMG-SMLLTWIY 344

Query: 249 GRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGL 308
           GRTFV E N  +KLK+QTW +P++ VQY L W+++AINS+IE+AI+EAD KG KV SLGL
Sbjct: 345 GRTFVVERNQFEKLKMQTWAIPKFNVQYFLQWQKQAINSMIEDAIVEADQKGCKVFSLGL 404

Query: 309 LNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVA 368
           LNQGEELN  G +Y++R P KL+++VVDGSSLA AVV+NS+PK+   VLLRG +T  KVA
Sbjct: 405 LNQGEELNIYGGLYVQRNP-KLRVRVVDGSSLAVAVVLNSIPKSATQVLLRGKLT--KVA 461

Query: 369 NAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGK 428
            A++ SLCQ GI+VA + +++Y KL      + + N VLS  Y+ +   IWLVGD LT +
Sbjct: 462 YALSYSLCQRGIQVAVLHEEEYRKLNKSFNTKFESNPVLSKGYSQN---IWLVGDGLTNE 518

Query: 429 EQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRI 488
           EQ +APKGT FIP++Q+PP+ +RKDCFYH TPAM  P S+ N+HSCENWL RRVMSAWRI
Sbjct: 519 EQMKAPKGTTFIPFSQLPPKIVRKDCFYHCTPAMKAPRSIENVHSCENWLPRRVMSAWRI 578

Query: 489 AGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
           AG++HA+EGW  +ECG TM +I QVW A+LRHGF+P+
Sbjct: 579 AGVVHAMEGWTEHECGYTMSNIDQVWKATLRHGFQPV 615

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489248|ref|XP_002265685.2| PREDICTED: protein WAX2-like [Vitis vinifera]

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/524 (64%), Positives = 417/524 (79%), Gaps = 19/524 (3%)

Query: 2   LIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEP 61
            I P  S++  WR DGV++TIL+H GPVEFLYYW HRALHHHYLYSRYHSHHHSS+VTEP
Sbjct: 111 FILPGASHMPLWRVDGVVITILLHTGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEP 170

Query: 62  ITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMW 121
           ITSVIHPFAEHI YFLLF+IPL+T +    + I +F GYI Y+DFMNNMGHCNFE +P W
Sbjct: 171 ITSVIHPFAEHIGYFLLFSIPLLTMIFTGTSCIVAFFGYISYIDFMNNMGHCNFELVPKW 230

Query: 122 LFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGE 181
           LF++FP LK+LMYTPSY +LHHTQFRTNYSLFMP YDY+YGT+DRSSD +YEKSL R   
Sbjct: 231 LFSIFPFLKYLMYTPSYFTLHHTQFRTNYSLFMPFYDYMYGTMDRSSDVLYEKSLTRP-- 288

Query: 182 EEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCS 241
             EES    DVVHLTHLTTP+SIYH+R+GFA +ASKP+     +S+WYL+L+WP T+S  
Sbjct: 289 --EESP---DVVHLTHLTTPDSIYHIRLGFAFVASKPY-----ISKWYLRLMWPLTSSYM 338

Query: 242 VLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 301
           +L+ WI  RTFV E N  +KLKLQTWV+P+Y +QY L W+ E INSLIEEAIL A+ +GV
Sbjct: 339 MLI-WICSRTFVLERNHFNKLKLQTWVIPKYRIQYFLKWQNEPINSLIEEAILHAEERGV 397

Query: 302 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGT 361
           KV+SLGLLNQGEELN  G++Y+   P KLKIKVVDGSSLA AVV+NS+PK T  VL RG 
Sbjct: 398 KVLSLGLLNQGEELNLYGKLYIHLNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGK 456

Query: 362 VTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLV 421
           ++  KVA   A +LCQ GI+V T  +++++K+K+++  + +  L LS +YA    KIWLV
Sbjct: 457 LS--KVAYFTAIALCQKGIQVTTFREEEHKKIKMKLNTKLRDKLALSKNYAH---KIWLV 511

Query: 422 GDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR 481
           GD LT +EQ +APKGT+FIP++Q PP+++RKDCFYH+TPAM+ P S  NM SCENWL RR
Sbjct: 512 GDGLTEEEQLKAPKGTLFIPFSQFPPKRMRKDCFYHTTPAMMSPTSFENMDSCENWLPRR 571

Query: 482 VMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
            MSAWR+AGI+HALEGW+++ECG T+ DI ++W AS +HGFRPL
Sbjct: 572 AMSAWRVAGILHALEGWNVHECGHTIFDIEKIWEASFQHGFRPL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454042|ref|XP_002262785.1| PREDICTED: protein WAX2 [Vitis vinifera] gi|297744850|emb|CBI38118.3| unnamed protein product [Vitis vinifera]

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/525 (63%), Positives = 416/525 (79%), Gaps = 20/525 (3%)

Query: 2   LIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEP 61
           +I P  +++  WR+DGV+LTIL+HMGPVEFLYYW HRALHHHYLYSRYHSHHHSS+VTEP
Sbjct: 111 MILPGVAHMPLWRTDGVLLTILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEP 170

Query: 62  ITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMW 121
           ITSVIHPFAEH+ YFLLF IPL+    ++ +S+A+  GYI Y+DFMNNMGHCNFE IP  
Sbjct: 171 ITSVIHPFAEHLAYFLLFLIPLLAGFFMRKSSMAAVFGYISYIDFMNNMGHCNFELIPKM 230

Query: 122 LFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGE 181
           LF++FPPLK+LMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGT+D+SSD++YEKSL R  +
Sbjct: 231 LFSIFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDALYEKSLIRPEQ 290

Query: 182 EEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCS 241
                     VVHLTHL TP+SIYHLR+GFASLASKP+ Y     +WY+  +WP T  CS
Sbjct: 291 LPH-------VVHLTHLVTPQSIYHLRLGFASLASKPYTY-----KWYVWAMWPVTC-CS 337

Query: 242 VLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 301
           ++++W YGRTF+ E N  +K+ +QTWVVP++ +QY L    E+I+SLIEEAIL+AD +G+
Sbjct: 338 IMLTWTYGRTFILERNQFNKVNVQTWVVPKFKIQYLLKLGNESIDSLIEEAILKADKRGI 397

Query: 302 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGT 361
           KV+SLGLLNQG+E N  GE+Y+   P KLKIKVVDGSSLA AVV+NS+PK T  VL RG 
Sbjct: 398 KVLSLGLLNQGDEFNSYGELYIHNNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGN 456

Query: 362 VTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIP-VEAQHNLVLSTSYAAHKTKIWL 420
           +T  KVA  +AS+LCQM I+VAT  KD+YE+L  ++  VE +  L+LS S+     KIW+
Sbjct: 457 LT--KVAYFIASALCQMDIQVATSRKDEYEQLNTKLKNVECESKLLLSKSFTE---KIWV 511

Query: 421 VGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGR 480
           VGD LT +EQ +A  GT+FIP++Q PP++LRKDC YH+TPAM+ P S  N+ SCENWL R
Sbjct: 512 VGDGLTKEEQMKASTGTLFIPFSQFPPKRLRKDCLYHTTPAMMPPKSFQNIDSCENWLPR 571

Query: 481 RVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
           R MSA R+AG+IHALEGW+++ECG TM ++ ++W ASL+HGFRPL
Sbjct: 572 RAMSASRVAGVIHALEGWNVHECGNTMFNVEKIWEASLQHGFRPL 616

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1209703|gb|AAB87721.1| maize gl1 homolog [Arabidopsis thaliana]

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/521 (63%), Positives = 415/521 (79%), Gaps = 18/521 (3%)

Query: 8   SNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIH 67
             L +WR+DGV++  L+H GPVEFLYYW H+ALHHH+LYSRYHSHHHSS+VTEPITSVIH
Sbjct: 117 KQLPWWRTDGVLMGALIHTGPVEFLYYWVHKALHHHFLYSRYHSHHHSSIVTEPITSVIH 176

Query: 68  PFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFP 127
           PFAEHI YF+LFAIPL+TT+V K ASI SF GYIIY+DFMNNMGHCNFE IP  LF +FP
Sbjct: 177 PFAEHIAYFILFAIPLLTTLVTKTASIISFAGYIIYIDFMNNMGHCNFELIPKRLFHLFP 236

Query: 128 PLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESA 187
           PLKFL YTPSYHSLHHTQFRTNYSLFMP+YDYIYGT+D S+D++YEK+L+R         
Sbjct: 237 PLKFLCYTPSYHSLHHTQFRTNYSLFMPLYDYIYGTMDESTDTLYEKTLERGD------- 289

Query: 188 DDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWI 247
           D VDVVHLTHLTTPESIYHLRIG  S AS P  Y     +W+++LLWPFT S S++ +  
Sbjct: 290 DRVDVVHLTHLTTPESIYHLRIGLPSFASYPFAY-----RWFMRLLWPFT-SLSMIFTLF 343

Query: 248 YGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLG 307
           Y R FV+E N+ +KL LQ+WV+PRY +QY L WR+EAIN++IE+AILEAD KGVKV+SLG
Sbjct: 344 YARLFVAERNSFNKLNLQSWVIPRYNLQYLLKWRKEAINNMIEKAILEADKKGVKVLSLG 403

Query: 308 LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKV 367
           L+NQGEELNRNGE+Y+   P+ +K+++VDGS LAAAVV+NS+PK T  V++ G +T  KV
Sbjct: 404 LMNQGEELNRNGEVYIHNHPD-MKVRLVDGSRLAAAVVINSVPKATTSVVMTGNLT--KV 460

Query: 368 ANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTG 427
           A  +AS+LCQ G++V+T+  D+YEK++  +P E + +LV  TS A    K+WLVG+  T 
Sbjct: 461 AYTIASALCQRGVQVSTLRLDEYEKIRSCVPQECRDHLVYLTSEALSSNKVWLVGEGTTR 520

Query: 428 KEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWR 487
           +EQ +A KGT+FIP++Q P ++LR DC YH+TPA+I+P SL N+HSCENWL R+ MSA R
Sbjct: 521 EEQEKATKGTLFIPFSQFPLKQLRSDCIYHTTPALIVPKSLVNVHSCENWLPRKAMSATR 580

Query: 488 IAGIIHALEGWDLNECGQT--MCDIHQVWHASLRHGFRPLF 526
           +AGI+HALEGW+ +ECG +  + D+ +VW A L HGF+PL 
Sbjct: 581 VAGILHALEGWETHECGTSLLLSDLDKVWEACLSHGFQPLL 621

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	529
TAIR|locus:2204813	627	AT1G02190 "AT1G02190" [Arabido	0.956	0.807	0.534	7.1e-148
UNIPROTKB|Q7XDI3	621	Os10g0471100 "CER1 protein, pu	0.958	0.816	0.506	2.8e-137
UNIPROTKB|Q109K1	595	LOC_Os10g33250 "CER1 protein,	0.839	0.746	0.517	9.7e-133
TAIR|locus:2040666	613	AT2G37700 "AT2G37700" [Arabido	0.725	0.626	0.508	2.1e-100
TAIR|locus:2174368	632	CER3 "ECERIFERUM 3" [Arabidops	0.947	0.792	0.346	3.1e-76
UNIPROTKB|Q6ETL8	628	P0544B02.10 "Os02g0178800 prot	0.956	0.805	0.322	1.1e-66

TAIR|locus:2204813 AT1G02190 "AT1G02190" [Arabidopsis thaliana (taxid:3702)]

 Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
 Identities = 282/528 (53%), Positives = 359/528 (67%)

Query:     5 PSYSNLRFWRSDGVILTILVHMGPVEFLYYWFXXXXXXXXXXXXXXXXXXXXVVTEPITS 64
             P  S+L  WR DG IL  L+H GPVEFLYYWF                    +VTEPITS
Sbjct:   114 PGASHLPPWRLDGAILMALLHAGPVEFLYYWFHRALHHHFLYSRYHSHHHSSIVTEPITS 173

Query:    65 VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 124
             V+HPFAEHI Y LLFAIP+VT  +    SI S +GYI Y+DFMNNMGHCNFE  P  LF 
Sbjct:   174 VVHPFAEHIAYTLLFAIPMVTASLCGILSIVSIMGYITYIDFMNNMGHCNFELFPKRLFH 233

Query:   125 VFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXX 184
             +FPPLKFL YTPS+HSLHHTQFRTNYSLFMPIYD+IYGT D  +DS+YE+SL+       
Sbjct:   234 LFPPLKFLCYTPSFHSLHHTQFRTNYSLFMPIYDFIYGTTDNLTDSLYERSLE------- 286

Query:   185 XSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQ-LLWPFTASCS-V 242
                +  DV+HLTHLTT  SIY +R+GF SL+S P    ++   WYL   +WPFT  CS  
Sbjct:   287 IEEESPDVIHLTHLTTHNSIYQMRLGFPSLSSCP---LWSRPPWYLTCFMWPFTLLCSFA 343

Query:   243 LVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVK 302
             L S I  RTFV E N L  L + + ++P++   Y      E+IN++IEEAILEAD KGVK
Sbjct:   344 LTSAIPLRTFVFERNRLRDLTVHSHLLPKFSFHYKSQRHHESINTIIEEAILEADEKGVK 403

Query:   303 VISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXX 362
             V+SLGL+N  EELN +GE+Y+++ P KLKI++VDGSS+AA VV+N++PK    ++ RG  
Sbjct:   404 VMSLGLMNNREELNGSGEMYVQKYP-KLKIRLVDGSSMAATVVINNIPKEATEIVFRGNL 462

Query:   363 XXXXXXXXXXSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVG 422
                        +LCQ G+KV  + ++++ KL   I      NLVLSTS + +  K+WLVG
Sbjct:   463 TKVASAVVF--ALCQKGVKVVVLREEEHSKL---IKSGVDKNLVLSTSNSYYSPKVWLVG 517

Query:   423 DDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRV 482
             D +  +EQ +A +GT+F+P++  PP KLRKDCFY STPAM +P S  N+ SCENWLGRRV
Sbjct:   518 DGIENEEQMKAKEGTLFVPFSHFPPNKLRKDCFYQSTPAMRVPKSAQNIDSCENWLGRRV 577

Query:   483 MSAWRIAGIIHALEGWDLNECGQTMCDI---HQVWHASLRHGFRPLFP 527
             MSAW+I GI+HALEGW+ ++CG T C++   H +W A+LRH F+PL P
Sbjct:   578 MSAWKIGGIVHALEGWEEHDCGNT-CNVLRLHAIWEAALRHDFQPLPP 624

GO:0003824 "catalytic activity" evidence=ISS

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q7XDI3 Os10g0471100 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
 Identities = 266/525 (50%), Positives = 343/525 (65%)

Query:     2 LIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFXXXXXXXXXXXXXXXXXXXXVVTEP 61
             L  P   +L  WR+DG  L  L+H GPVEFLYYWF                    +VTEP
Sbjct:   111 LYVPGGQHLPLWRTDGAGLIALLHAGPVEFLYYWFHRALHHHFLYTHYHSHHHSSIVTEP 170

Query:    62 ITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMW 121
             ITSVIHPFAE + Y LLF+IPL+   +   ASI +F  Y+IY+DFMNNMGHCNFE +P W
Sbjct:   171 ITSVIHPFAELVAYELLFSIPLIACALTGTASIIAFEMYLIYIDFMNNMGHCNFELVPSW 230

Query:   122 LFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGX 181
             LFT FPPLK+LMYTPS+HSLHHTQFRTNYSLFMP YDYIY T+D+SSD++YE SLK +  
Sbjct:   231 LFTWFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDTLYENSLKNN-- 288

Query:   182 XXXXSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCS 241
                   + VDVVHLTHLTT  SIYH+R GFA  AS+P+     +S+WY++++WP +   S
Sbjct:   289 ---EEEEAVDVVHLTHLTTLHSIYHMRPGFAEFASRPY-----VSRWYMRMMWPLSW-LS 339

Query:   242 VLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 301
             ++++W YG +F  E N + K+++Q+W +PRY   Y L W +EAIN LIE+A+ EAD  G 
Sbjct:   340 MVLTWTYGSSFTVERNVMKKIRMQSWAIPRYSFHYGLDWEKEAINDLIEKAVCEADKNGA 399

Query:   302 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGX 361
             KV+SLGLLNQ   LN++GE YL + P KL  ++VDG+SLAAAVVVNS+P+ T  V+L G 
Sbjct:   400 KVVSLGLLNQAHTLNKSGEQYLLKYP-KLGARIVDGTSLAAAVVVNSIPQGTDQVILAGN 458

Query:   362 XXXXXXXXXXXSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLV 421
                         +LC+  IKV    K DY  LK  IP     NL  S +  A K  +   
Sbjct:   459 VSKVARAVA--QALCKKNIKVTMTNKQDYHLLKPEIPETVADNLSFSKTGTA-KVWLIGD 515

Query:   422 GDDLTGKEQARAPKGTI-FIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGR 480
             G D   + +A+     I +  +   P    +  C Y +TPAM +P +L N+HSCENWL R
Sbjct:   516 GLDSAEQFRAQKGTLFIPYSQFP--PKMVRKDSCSYSTTPAMAVPKTLQNVHSCENWLPR 573

Query:   481 RVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
             RVMSAWRIAGI+HALEGW+ +ECG  + D+ +VW A++ HGF P+
Sbjct:   574 RVMSAWRIAGILHALEGWNEHECGDKVLDMDKVWSAAIMHGFCPV 618

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0010143 "cutin biosynthetic process" evidence=IDA

GO:0043668 "exine" evidence=IMP

GO:0048653 "anther development" evidence=IMP

UNIPROTKB|Q109K1 LOC_Os10g33250 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1212 (431.7 bits), Expect = 9.7e-133, Sum P(2) = 9.7e-133
 Identities = 239/462 (51%), Positives = 312/462 (67%)

Query:    65 VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 124
             VIHPFAE + Y LLF+IPL+   +   ASI +F  Y+IY+DFMNNMGHCNFE +P WLFT
Sbjct:   148 VIHPFAELVAYELLFSIPLIACALTGTASIIAFEMYLIYIDFMNNMGHCNFELVPSWLFT 207

Query:   125 VFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXX 184
              FPPLK+LMYTPS+HSLHHTQFRTNYSLFMP YDYIY T+D+SSD++YE SLK +     
Sbjct:   208 WFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDTLYENSLKNN----- 262

Query:   185 XSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLV 244
                + VDVVHLTHLTT  SIYH+R GFA  AS+P+     +S+WY++++WP +   S+++
Sbjct:   263 EEEEAVDVVHLTHLTTLHSIYHMRPGFAEFASRPY-----VSRWYMRMMWPLSW-LSMVL 316

Query:   245 SWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVI 304
             +W YG +F  E N + K+++Q+W +PRY   Y L W +EAIN LIE+A+ EAD  G KV+
Sbjct:   317 TWTYGSSFTVERNVMKKIRMQSWAIPRYSFHYGLDWEKEAINDLIEKAVCEADKNGAKVV 376

Query:   305 SLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXX 364
             SLGLLNQ   LN++GE YL + P KL  ++VDG+SLAAAVVVNS+P+ T  V+L G    
Sbjct:   377 SLGLLNQAHTLNKSGEQYLLKYP-KLGARIVDGTSLAAAVVVNSIPQGTDQVILAGNVSK 435

Query:   365 XXXXXXXXSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDD 424
                      +LC+  IKV    K DY  LK  IP     NL  S +  A K  +   G D
Sbjct:   436 VARAVA--QALCKKNIKVTMTNKQDYHLLKPEIPETVADNLSFSKTGTA-KVWLIGDGLD 492

Query:   425 LTGKEQARAPKGTI-FIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 483
                + +A+     I +  +   P    +  C Y +TPAM +P +L N+HSCENWL RRVM
Sbjct:   493 SAEQFRAQKGTLFIPYSQFP--PKMVRKDSCSYSTTPAMAVPKTLQNVHSCENWLPRRVM 550

Query:   484 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
             SAWRIAGI+HALEGW+ +ECG  + D+ +VW A++ HGF P+
Sbjct:   551 SAWRIAGILHALEGWNEHECGDKVLDMDKVWSAAIMHGFCPV 592

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0010143 "cutin biosynthetic process" evidence=IDA

GO:0043668 "exine" evidence=IMP

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2040666 AT2G37700 "AT2G37700" [Arabidopsis thaliana (taxid:3702)]

 Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
 Identities = 203/399 (50%), Positives = 259/399 (64%)

Query:     8 SNLRFWRSDGVILTILVHMGPVEFLYYWFXXXXXXXXXXXXXXXXXXXXVVTEPITSVIH 67
             S + FWR+DGVIL  L+H GPVEF+YYWF                    +VTEPITSV+H
Sbjct:   113 STIPFWRTDGVILVALLHAGPVEFIYYWFHRALHHHFLYSRYHSHHHSSIVTEPITSVVH 172

Query:    68 PFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFP 127
             PFAEHI Y L+  +PL+TT +    S+ S   Y+ Y+DFMNNMGHCNFE IP +LF++ P
Sbjct:   173 PFAEHIGYTLILGLPLITTFMCGTVSVVSIALYLTYIDFMNNMGHCNFELIPKFLFSLLP 232

Query:   128 PLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXXXSA 187
             PLKFL YTPS+HSLHHTQFRTNYSLFMP+YDYIYGT D  SDS+YE SL++         
Sbjct:   233 PLKFLCYTPSFHSLHHTQFRTNYSLFMPMYDYIYGTTDECSDSLYETSLEKE-------E 285

Query:   188 DDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWI 247
             +  D +HLTHLT+ +SIYHLR+GFASL+S P       S+ YL L+ PF    S ++   
Sbjct:   286 EKPDAIHLTHLTSLDSIYHLRLGFASLSSHP-----LSSRCYLFLMKPFALILSFILRSF 340

Query:   248 YGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLG 307
               +TFV E N    L L + ++P++   Y    ++E IN +IE AILEAD KGVKV+SLG
Sbjct:   341 SFQTFVVERNRFRDLTLHSHLLPKFSSHYMSHQQKECINKMIEAAILEADKKGVKVMSLG 400

Query:   308 LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXXX 367
             LLNQGEELN  GE+Y+ R P KLKI++VDG SLAA VV++S+P  T  VL RG       
Sbjct:   401 LLNQGEELNGYGEMYVRRHP-KLKIRIVDGGSLAAEVVLHSIPVGTKEVLFRGQITKVAR 459

Query:   368 XXXXXSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLV 406
                   SLCQ  IKV  + K+++  L   +  + + NL+
Sbjct:   460 AIVF--SLCQNAIKVMVLRKEEHSMLAEFLDDKCKENLI 496

GO:0003824 "catalytic activity" evidence=ISS

GO:0005506 "iron ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2174368 CER3 "ECERIFERUM 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
 Identities = 180/519 (34%), Positives = 272/519 (52%)

Query:     8 SNLRFWRSDGVILTILVHMGPVEFLYYWFXXXXXXXXXXXXXXXXXX-XXVVTEPITSVI 66
             ++L  W + G+I  I++H+   E LYY+                       V  P+T+  
Sbjct:   118 NSLPLWNTKGLIALIVLHVTFSEPLYYFLHRSFHRNNYFFTHYHSFHHSSPVPHPMTAGN 177

Query:    67 HPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVF 126
                 E+I+  ++  +PL+   +    S+++  GY +  DFM  +GHCN E     LF + 
Sbjct:   178 ATLLENIILCVVAGVPLIGCCLFGVGSLSAIYGYAVMFDFMRCLGHCNVEIFSHKLFEIL 237

Query:   127 PPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXXXS 186
             P L++L+YTP+YHSLHH +  TN+ LFMP++D +  T + +S  + +K    +G      
Sbjct:   238 PVLRYLIYTPTYHSLHHQEMGTNFCLFMPLFDVLGDTQNPNSWELQKKIRLSAGERKRVP 297

Query:   187 ADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSW 246
                 + V L H     S  H    F S AS P  YT   ++ +L  +WPFT  C +L  W
Sbjct:   298 ----EFVFLAHGVDVMSAMHAPFVFRSFASMP--YT---TRIFLLPMWPFTF-CVMLGMW 347

Query:   247 IYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISL 306
              + +TF+    TL     QTW VPR+  QY LP+  + IN  IE AIL AD  GVKVISL
Sbjct:   348 AWSKTFLFSFYTLRNNLCQTWGVPRFGFQYFLPFATKGINDQIEAAILRADKIGVKVISL 407

Query:   307 GLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXX 366
               LN+ E LN  G +++ + P+ L+++VV G++L AAV++  +PK    V L G      
Sbjct:   408 AALNKNEALNGGGTLFVNKHPD-LRVRVVHGNTLTAAVILYEIPKDVNEVFLTGATSKLG 466

Query:   367 XXXXXXSSLCQMGIKVA--TICKDDYEKLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGD 423
                     LC+ G++V   T+  + ++K++   PVE Q+NLV  T Y AA   K W+VG 
Sbjct:   467 RAIALY--LCRRGVRVLMLTLSMERFQKIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGK 524

Query:   424 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 483
              LT +EQ+ AP GT F  +   P  K R++C Y    AM +P  +  + +CE  + R V+
Sbjct:   525 WLTPREQSWAPAGTHFHQFVVPPILKFRRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVV 584

Query:   484 SAWRIAGIIHALEGWDLNECGQTMCD-IHQVWHASLRHG 521
              A    G++H LEGW  +E G    D I  VW A++++G
Sbjct:   585 HACHAGGVVHMLEGWKHHEVGAIDVDRIDLVWEAAMKYG 623

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=ISS

GO:0005506 "iron ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IMP

GO:0016020 "membrane" evidence=ISS

GO:0042335 "cuticle development" evidence=RCA;IMP

GO:0048235 "pollen sperm cell differentiation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006723 "cuticle hydrocarbon biosynthetic process" evidence=IMP

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0043447 "alkane biosynthetic process" evidence=IDA

UNIPROTKB|Q6ETL8 P0544B02.10 "Os02g0178800 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
 Identities = 170/527 (32%), Positives = 258/527 (48%)

Query:     2 LIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFXXXXXXXXXXXXXXXXXXXXVVTEP 61
             L+ PS      W   G  + +L+H+   E L+YW                      VT P
Sbjct:   118 LLLPSLKQA--WDPRGWAIALLLHVLVAEPLFYWAHRALHRAPLFSRYHAAHHHASVTTP 175

Query:    62 ITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMW 121
             +T+      E ++  ++  +PL    ++   S+    G+++  DF+ +MG+ N E I   
Sbjct:   176 LTAGFGTPLESLLLTVVIGVPLAGAFLMGVGSVGLVYGHVLLFDFLRSMGYSNVEVISPR 235

Query:   122 LFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGX 181
             +F   P L++L+YTP+Y SLHH +  +N+ LFMPI+D + GT++  S   +E  L++   
Sbjct:   236 VFQAVPLLRYLIYTPTYLSLHHREKDSNFCLFMPIFDLLGGTLNHKS---WE--LQKE-V 289

Query:   182 XXXXSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCS 241
                 +    D V L H+    +  H+     S +S P    + L  +     WP  A   
Sbjct:   290 YLGKNDQAPDFVFLAHVVDIMASMHVPFVLRSCSSTPFANHFVLLPF-----WP-VAFGF 343

Query:   242 VLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV 301
             +L+ W   +TF+  S  L     Q W VPRY  QY +P  ++ IN  IE AIL AD  GV
Sbjct:   344 MLLMWCCSKTFLVSSYRLRGNLHQMWTVPRYGFQYFIPAAKKGINEQIELAILRADRMGV 403

Query:   302 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGX 361
             KV+SL  LN+ E LN  G +++ + P +L+++VV G++L AAV++N +P     V L G 
Sbjct:   404 KVLSLAALNKNEALNGGGTLFVNKHP-ELRVRVVHGNTLTAAVILNEIPSNVKDVFLTGA 462

Query:   362 XXXXXXXXXXXSSLCQMGIKVA--TICKDDYEKLKLRIPVEAQHNLVLSTSYA-AHKTKI 418
                          LC+  I+V   T+  + + K++   P E Q  LV  T Y  A   K 
Sbjct:   463 TSKLGRAIALY--LCRKKIRVLMLTLSSERFLKIQREAPAEFQQYLVQVTKYQPAQNCKT 520

Query:   419 WLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWL 478
             WLVG  L+ +EQ  AP GT F  +   P    R+DC Y    AM +P  +  +  CE  +
Sbjct:   521 WLVGKWLSPREQRWAPAGTHFHQFVVPPIIGFRRDCTYGKLAAMRLPKDVQGLGYCEYTM 580

Query:   479 GRRVMSAWRIAGIIHALEGWDLNECGQTMCD-IHQVWHASLRHGFRP 524
              R V+ A    G++H LEGW+ +E G    D I  VW A+L+HG  P
Sbjct:   581 ERGVVHACHAGGVVHFLEGWEHHEVGAIDVDRIDVVWKAALKHGLTP 627


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      529       492   0.00082  119 3  11 22  0.47    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  634 (67 KB)
  Total size of DFA:  336 KB (2167 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  40.62u 0.12s 40.74t   Elapsed:  00:00:02
  Total cpu time:  40.63u 0.12s 40.75t   Elapsed:  00:00:02
  Start:  Tue May 21 05:17:40 2013   End:  Tue May 21 05:17:42 2013

GO:0010025 "wax biosynthetic process" evidence=IMP

GO:0043447 "alkane biosynthetic process" evidence=IMP

GO:0046184 "aldehyde biosynthetic process" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
F4HVY0	CER1_ARATH	No assigned EC number	0.6316	0.9565	0.8096	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	529
PLN02869	620	PLN02869, PLN02869, fatty aldehyde decarbonylase	0.0
pfam12076	164	pfam12076, Wax2_C, WAX2 C-terminal domain	2e-85
pfam04116	114	pfam04116, FA_hydroxylase, Fatty acid hydroxylase	1e-17
COG3000	271	COG3000, ERG3, Sterol desaturase [Lipid metabolism	8e-17

>gnl|CDD|166510 PLN02869, PLN02869, fatty aldehyde decarbonylase

 Score =  841 bits (2174), Expect = 0.0
 Identities = 362/522 (69%), Positives = 432/522 (82%), Gaps = 20/522 (3%)

Query: 5   PSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS 64
           P  S++  WR+DGV++TIL+HMGPVEFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITS
Sbjct: 114 PGASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITS 173

Query: 65  VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 124
           VIHPFAEHI YFLLFAIPL+TT+    ASIA+F GYI Y+DFMNNMGHCNFE IP WLF+
Sbjct: 174 VIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFS 233

Query: 125 VFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEE 184
           +FPPLK+LMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGT+D+SSD++YEKSLKR     E
Sbjct: 234 IFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLKR----PE 289

Query: 185 ESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLV 244
           E     DVVHLTHLTTP+SIYHLR+GFASLASKP+       +WYL+L+WP T S S+++
Sbjct: 290 EI---PDVVHLTHLTTPDSIYHLRLGFASLASKPYIS-----KWYLRLMWPVT-SWSMML 340

Query: 245 SWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVI 304
           +WIYGRTFV E N  +KL LQTWV+P+Y +QY L W+ E+INSLIEEAILEAD +GVKV+
Sbjct: 341 TWIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKVL 400

Query: 305 SLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTA 364
           SLGLLNQGEELNR GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++ 
Sbjct: 401 SLGLLNQGEELNRYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS- 458

Query: 365 NKVANAVASSLCQMGIKVATICKDDYEKLKLRIP-VEAQHNLVLSTSYAAHKTKIWLVGD 423
            KVA  +AS+LCQ GI+VAT  +D+YEKL  ++P  E    L+LS +Y+    KIWLVGD
Sbjct: 459 -KVAYFIASALCQRGIQVATFREDEYEKLNKKLPNTECGSKLLLSKNYS---EKIWLVGD 514

Query: 424 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 483
            LT +EQ +A KGT+FIP++Q PP++LRKDCFYH+TPAM+ P S  N+ SCENWL RR M
Sbjct: 515 GLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFYHTTPAMMSPKSFENVDSCENWLPRRAM 574

Query: 484 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 525
           SAWR+AGI+HALEGW+++ECG TM DI ++W ASL+HGFRPL
Sbjct: 575 SAWRVAGILHALEGWNVHECGYTMFDIEKIWEASLQHGFRPL 616

Length = 620

>gnl|CDD|192933 pfam12076, Wax2_C, WAX2 C-terminal domain

 Score =  261 bits (668), Expect = 2e-85
 Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 5/169 (2%)

Query: 356 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHK 415
           VLLRG  +  KVA A+A +LC+ G+KV  + K++YEKLK   P E Q NLVLSTSY A  
Sbjct: 1   VLLRGNTS--KVARAIALALCKKGVKVVMLSKEEYEKLKPEAPPEVQDNLVLSTSYTA-- 56

Query: 416 TKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCE 475
            K+WLVGD L+ +EQ +APKGT+FIP++Q PP+KLRKDCFYH+TPAM +P S  N+ SCE
Sbjct: 57  -KVWLVGDGLSPEEQMKAPKGTLFIPFSQFPPKKLRKDCFYHTTPAMKLPKSFQNLDSCE 115

Query: 476 NWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRP 524
           NWL RRVMSAWR  GI+HALEGW+ +ECG T+  I +VW A+LRHGFRP
Sbjct: 116 NWLPRRVMSAWRAGGIVHALEGWNEHECGDTVLGIDKVWEAALRHGFRP 164

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with pfam04116. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases. Length = 164

>gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily

 Score = 78.7 bits (194), Expect = 1e-17
 Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 11/124 (8%)

Query: 22  ILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS-VIHPFAEHIVYFLLFA 80
            L+ +   +F+ YW HR LH      R+H  HHS     P+T+   HP    +   LL  
Sbjct: 1   FLLGLLLFDFVEYWVHRLLHRVPFLWRFHKVHHSDESPNPLTAFRFHP----LEALLLAL 56

Query: 81  IPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHS 140
           IPL+  ++L    +   +  ++    +    H                L +L  TP YH 
Sbjct: 57  IPLLLLLLLFGLHLLVILLGLLLGTLLYLFIHSGLHLWLPP------LLSYLFVTPRYHR 110

Query: 141 LHHT 144
           LHH+
Sbjct: 111 LHHS 114

This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins. Length = 114

>gnl|CDD|225546 COG3000, ERG3, Sterol desaturase [Lipid metabolism]

 Score = 80.2 bits (198), Expect = 8e-17
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 13/138 (9%)

Query: 29  VEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSV-IHPFAEHIVYFLLFAIPLVTTM 87
           ++  YYW HR LH   L   +H  HHSS V +P+T++  HP  E ++   L  +PL+   
Sbjct: 106 LDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPL-EILLLAFLGLLPLLLLG 164

Query: 88  VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFR 147
                S  +     I++ F   + H N +              ++  TP +H LHH++  
Sbjct: 165 ----LSPVAVALLFIFLLFWAVLIHSNLDL--PLPLGWLR---YVFNTPRHHRLHHSKDP 215

Query: 148 --TNYSLFMPIYDYIYGT 163
              NY + +  +D ++GT
Sbjct: 216 YDKNYGVTLTFWDRLFGT 233

Length = 271

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	529
PLN02869	620	fatty aldehyde decarbonylase	100.0
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	100.0
COG5322	351	Predicted dehydrogenase [General function predicti	100.0
PRK14982	340	acyl-ACP reductase; Provisional	100.0
COG3000	271	ERG3 Sterol desaturase [Lipid metabolism]	99.94
KOG0873	283	consensus C-4 sterol methyl oxidase [Lipid transpo	99.89
KOG0872	312	consensus Sterol C5 desaturase [Lipid transport an	99.87
KOG0874	287	consensus Sphingolipid hydroxylase [Lipid transpor	99.72
PF04116	114	FA_hydroxylase: Fatty acid hydroxylase superfamily	99.69
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	99.37
PLN02434	237	fatty acid hydroxylase	99.04
KOG0539	240	consensus Sphingolipid fatty acid hydroxylase [Lip	98.17
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.51
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.41
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.38
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.37
PLN02601	303	beta-carotene hydroxylase	97.26
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.11
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.06
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.05
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.05
PLN00203	519	glutamyl-tRNA reductase	96.88
PRK08618	325	ornithine cyclodeaminase; Validated	96.82
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.73
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.63
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.58
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.52
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.38
PLN03209	576	translocon at the inner envelope of chloroplast su	96.35
PRK06949	258	short chain dehydrogenase; Provisional	96.28
PRK09186	256	flagellin modification protein A; Provisional	96.27
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.27
PRK06407	301	ornithine cyclodeaminase; Provisional	96.26
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	96.24
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.21
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	96.19
PRK07340	304	ornithine cyclodeaminase; Validated	96.18
CHL00194	317	ycf39 Ycf39; Provisional	96.16
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.14
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.12
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.09
PRK06482	276	short chain dehydrogenase; Provisional	96.09
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.05
PRK05867	253	short chain dehydrogenase; Provisional	96.04
PRK08339	263	short chain dehydrogenase; Provisional	96.04
PRK08265	261	short chain dehydrogenase; Provisional	96.04
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.99
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	95.96
KOG1370	434	consensus S-adenosylhomocysteine hydrolase [Coenzy	95.93
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.86
PF10520	178	Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme	95.86
PRK07454	241	short chain dehydrogenase; Provisional	95.84
PRK06141	314	ornithine cyclodeaminase; Validated	95.84
PRK06196	315	oxidoreductase; Provisional	95.8
PRK06924	251	short chain dehydrogenase; Provisional	95.79
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.75
PRK06046	326	alanine dehydrogenase; Validated	95.74
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.72
PRK07478	254	short chain dehydrogenase; Provisional	95.71
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.7
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.69
PRK07326	237	short chain dehydrogenase; Provisional	95.69
PRK08267	260	short chain dehydrogenase; Provisional	95.69
PRK06823	315	ornithine cyclodeaminase; Validated	95.68
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.65
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.65
PRK07067	257	sorbitol dehydrogenase; Provisional	95.63
PRK08643	256	acetoin reductase; Validated	95.6
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.59
PLN02780	320	ketoreductase/ oxidoreductase	95.59
PRK07890	258	short chain dehydrogenase; Provisional	95.57
PRK06194	287	hypothetical protein; Provisional	95.57
PRK07109	334	short chain dehydrogenase; Provisional	95.56
PRK07589	346	ornithine cyclodeaminase; Validated	95.55
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.54
PRK06180	277	short chain dehydrogenase; Provisional	95.46
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.44
PRK05717	255	oxidoreductase; Validated	95.42
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.41
PRK06500	249	short chain dehydrogenase; Provisional	95.41
PRK06101	240	short chain dehydrogenase; Provisional	95.41
PRK06139	330	short chain dehydrogenase; Provisional	95.39
PRK09291	257	short chain dehydrogenase; Provisional	95.37
PRK05866	293	short chain dehydrogenase; Provisional	95.36
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.36
PRK06199	379	ornithine cyclodeaminase; Validated	95.34
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.33
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.33
PRK07774	250	short chain dehydrogenase; Provisional	95.32
PRK10538	248	malonic semialdehyde reductase; Provisional	95.32
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.32
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.29
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	95.28
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.23
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.21
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.2
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.19
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.19
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.16
PRK07102	243	short chain dehydrogenase; Provisional	95.15
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.14
PRK08251	248	short chain dehydrogenase; Provisional	95.12
PRK07825	273	short chain dehydrogenase; Provisional	95.12
PRK07063	260	short chain dehydrogenase; Provisional	95.1
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.08
PRK07677	252	short chain dehydrogenase; Provisional	95.05
PRK06947	248	glucose-1-dehydrogenase; Provisional	95.03
PRK09072	263	short chain dehydrogenase; Provisional	95.03
PRK07024	257	short chain dehydrogenase; Provisional	95.02
PRK05854	313	short chain dehydrogenase; Provisional	95.02
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	95.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.98
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.97
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.96
KOG1208	314	consensus Dehydrogenases with different specificit	94.96
PRK07074	257	short chain dehydrogenase; Provisional	94.95
PRK05876	275	short chain dehydrogenase; Provisional	94.95
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.95
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.94
PRK12746	254	short chain dehydrogenase; Provisional	94.94
PRK06138	252	short chain dehydrogenase; Provisional	94.91
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.91
PRK12939	250	short chain dehydrogenase; Provisional	94.91
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.9
PRK06172	253	short chain dehydrogenase; Provisional	94.88
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.87
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.87
PRK05993	277	short chain dehydrogenase; Provisional	94.84
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.84
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	94.82
PRK05872	296	short chain dehydrogenase; Provisional	94.82
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	94.8
PRK05884	223	short chain dehydrogenase; Provisional	94.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	94.8
PRK08589	272	short chain dehydrogenase; Validated	94.79
PRK06125	259	short chain dehydrogenase; Provisional	94.78
PRK07831	262	short chain dehydrogenase; Provisional	94.77
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	94.77
PRK05650	270	short chain dehydrogenase; Provisional	94.75
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.74
PRK08017	256	oxidoreductase; Provisional	94.73
PRK07814	263	short chain dehydrogenase; Provisional	94.71
PRK09135	249	pteridine reductase; Provisional	94.69
PRK07062	265	short chain dehydrogenase; Provisional	94.65
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.65
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.6
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.6
PRK07775	274	short chain dehydrogenase; Provisional	94.59
PRK12829	264	short chain dehydrogenase; Provisional	94.59
PRK06484	520	short chain dehydrogenase; Validated	94.53
PRK05599	246	hypothetical protein; Provisional	94.53
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.5
PRK07832	272	short chain dehydrogenase; Provisional	94.47
PRK06057	255	short chain dehydrogenase; Provisional	94.47
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.47
PLN02253	280	xanthoxin dehydrogenase	94.44
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	94.42
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.42
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.41
COG2910	211	Putative NADH-flavin reductase [General function p	94.41
PRK06182	273	short chain dehydrogenase; Validated	94.4
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.39
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	94.39
PRK08862	227	short chain dehydrogenase; Provisional	94.37
PRK06181	263	short chain dehydrogenase; Provisional	94.37
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.36
PRK07576	264	short chain dehydrogenase; Provisional	94.35
PRK05875	276	short chain dehydrogenase; Provisional	94.34
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.33
PRK12828	239	short chain dehydrogenase; Provisional	94.32
PRK12742	237	oxidoreductase; Provisional	94.28
PRK08703	239	short chain dehydrogenase; Provisional	94.27
PRK07806	248	short chain dehydrogenase; Provisional	94.26
PLN00198	338	anthocyanidin reductase; Provisional	94.25
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	94.24
PLN02583	297	cinnamoyl-CoA reductase	94.18
PRK08628	258	short chain dehydrogenase; Provisional	94.17
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	94.14
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	94.11
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	94.1
PRK08263	275	short chain dehydrogenase; Provisional	94.08
PRK08303	305	short chain dehydrogenase; Provisional	94.08
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.04
PRK08177	225	short chain dehydrogenase; Provisional	94.04
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	93.97
PRK07904	253	short chain dehydrogenase; Provisional	93.96
PRK07035	252	short chain dehydrogenase; Provisional	93.95
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	93.91
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.91
PRK09134	258	short chain dehydrogenase; Provisional	93.91
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.91
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	93.9
PRK06197	306	short chain dehydrogenase; Provisional	93.89
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.88
PRK05693	274	short chain dehydrogenase; Provisional	93.83
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	93.82
PLN02427	386	UDP-apiose/xylose synthase	93.82
PRK06953	222	short chain dehydrogenase; Provisional	93.81
PRK06914	280	short chain dehydrogenase; Provisional	93.8
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.78
PLN02650	351	dihydroflavonol-4-reductase	93.76
PRK08278	273	short chain dehydrogenase; Provisional	93.74
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	93.73
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	93.73
PRK12937	245	short chain dehydrogenase; Provisional	93.68
PRK07060	245	short chain dehydrogenase; Provisional	93.68
PRK12827	249	short chain dehydrogenase; Provisional	93.67
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.67
PRK09242	257	tropinone reductase; Provisional	93.66
PRK07985	294	oxidoreductase; Provisional	93.65
PRK08291	330	ectoine utilization protein EutC; Validated	93.59
PRK12743	256	oxidoreductase; Provisional	93.59
PRK06123	248	short chain dehydrogenase; Provisional	93.57
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	93.56
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	93.54
PLN02686	367	cinnamoyl-CoA reductase	93.54
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	93.49
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	93.43
PRK06128	300	oxidoreductase; Provisional	93.39
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.32
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	93.32
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.32
TIGR01746	367	Thioester-redct thioester reductase domain. It has	93.3
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	93.3
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.3
PRK06484	520	short chain dehydrogenase; Validated	93.29
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.29
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.28
PRK06198	260	short chain dehydrogenase; Provisional	93.28
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	93.26
PLN03139	386	formate dehydrogenase; Provisional	93.23
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.23
PRK08264	238	short chain dehydrogenase; Validated	93.22
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	93.19
PRK09496	453	trkA potassium transporter peripheral membrane com	93.14
PLN02214	342	cinnamoyl-CoA reductase	93.09
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	93.06
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	93.06
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	93.05
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	93.04
PRK08936	261	glucose-1-dehydrogenase; Provisional	93.03
PRK06841	255	short chain dehydrogenase; Provisional	93.01
PRK07201	657	short chain dehydrogenase; Provisional	92.97
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	92.96
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.94
PLN02494	477	adenosylhomocysteinase	92.93
PRK07023	243	short chain dehydrogenase; Provisional	92.92
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	92.91
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	92.89
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.86
PRK07069	251	short chain dehydrogenase; Validated	92.82
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	92.8
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	92.79
KOG0725	270	consensus Reductases with broad range of substrate	92.79
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	92.78
PRK08219	227	short chain dehydrogenase; Provisional	92.73
PRK06114	254	short chain dehydrogenase; Provisional	92.72
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	92.69
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	92.62
PRK06179	270	short chain dehydrogenase; Provisional	92.61
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	92.57
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.55
PRK05855	582	short chain dehydrogenase; Validated	92.54
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	92.49
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	92.46
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	92.45
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	92.42
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.39
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.35
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.34
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.31
PRK12747	252	short chain dehydrogenase; Provisional	92.31
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.27
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	92.22
PRK12744	257	short chain dehydrogenase; Provisional	92.2
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	92.17
PRK07791	286	short chain dehydrogenase; Provisional	92.16
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.16
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	92.14
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	92.13
PRK12938	246	acetyacetyl-CoA reductase; Provisional	92.13
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.1
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	92.09
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	92.07
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.07
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	92.06
PRK07041	230	short chain dehydrogenase; Provisional	92.05
PRK06701	290	short chain dehydrogenase; Provisional	91.95
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	91.92
PRK12935	247	acetoacetyl-CoA reductase; Provisional	91.87
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.86
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	91.84
PRK06483	236	dihydromonapterin reductase; Provisional	91.82
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	91.69
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	91.68
TIGR00658	304	orni_carb_tr ornithine carbamoyltransferase. Most	91.68
PRK06720	169	hypothetical protein; Provisional	91.65
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	91.63
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.62
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	91.6
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.54
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	91.54
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	91.54
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.53
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	91.52
PRK08655	437	prephenate dehydrogenase; Provisional	91.43
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	91.36
PRK07856	252	short chain dehydrogenase; Provisional	91.28
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	91.26
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	91.26
PRK07577	234	short chain dehydrogenase; Provisional	91.21
PRK06940	275	short chain dehydrogenase; Provisional	91.21
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	91.13
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	91.08
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	91.01
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	90.98
PRK08226	263	short chain dehydrogenase; Provisional	90.97
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.93
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	90.8
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	90.72
PRK07417	279	arogenate dehydrogenase; Reviewed	90.71
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.69
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	90.66
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	90.66
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.66
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	90.53
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	90.5
PRK06523	260	short chain dehydrogenase; Provisional	90.47
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	90.4
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.39
PRK12824	245	acetoacetyl-CoA reductase; Provisional	90.37
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	90.31
PRK01713	334	ornithine carbamoyltransferase; Provisional	90.3
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.28
COG3268	382	Uncharacterized conserved protein [Function unknow	90.18
PLN02778	298	3,5-epimerase/4-reductase	90.17
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	90.15
PRK08324	681	short chain dehydrogenase; Validated	90.11
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.07
PRK00779	304	ornithine carbamoyltransferase; Provisional	90.05
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	90.02
PRK06398	258	aldose dehydrogenase; Validated	89.99
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	89.98
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.93
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	89.86
PLN02653	340	GDP-mannose 4,6-dehydratase	89.77
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	89.73
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	89.72
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.6
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	89.58
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.54
PLN00015	308	protochlorophyllide reductase	89.51
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	89.47
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	89.47
PRK07574	385	formate dehydrogenase; Provisional	89.36
PRK13243	333	glyoxylate reductase; Reviewed	89.29
PLN02928	347	oxidoreductase family protein	89.18
PLN02695	370	GDP-D-mannose-3',5'-epimerase	89.13
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	89.0
KOG0409	327	consensus Predicted dehydrogenase [General functio	88.91
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	88.86
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	88.83
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	88.83
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	88.81
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	88.75
PRK08309	177	short chain dehydrogenase; Provisional	88.58
PRK12562	334	ornithine carbamoyltransferase subunit F; Provisio	88.55
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	88.54
PRK10675	338	UDP-galactose-4-epimerase; Provisional	88.5
PRK02255	338	putrescine carbamoyltransferase; Provisional	88.45
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	88.41
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	88.33
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	88.32
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	88.26
PLN00112	444	malate dehydrogenase (NADP); Provisional	88.0
PRK02102	331	ornithine carbamoyltransferase; Validated	87.9
PLN02240	352	UDP-glucose 4-epimerase	87.74
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	87.66
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.63
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	87.58
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	87.48
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.39
PRK09496	453	trkA potassium transporter peripheral membrane com	87.35
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	87.3
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	87.07
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	87.05
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	86.88
PRK12367	245	short chain dehydrogenase; Provisional	86.88
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	86.74
COG1028	251	FabG Dehydrogenases with different specificities (	86.69
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	86.67
COG0569	225	TrkA K+ transport systems, NAD-binding component [	86.63
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	86.6
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	86.58
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	86.44
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	86.38
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	86.28
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	86.24
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	85.94
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	85.82
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	85.82
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	85.71
PRK12480	330	D-lactate dehydrogenase; Provisional	85.69
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	85.69
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	85.66
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	85.65
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	85.64
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	85.63
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	85.62
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	85.57
PRK05442	326	malate dehydrogenase; Provisional	85.47
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	85.41
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	85.32
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	85.08
PLN02858	1378	fructose-bisphosphate aldolase	85.07
PRK10669	558	putative cation:proton antiport protein; Provision	85.04
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	85.0
PLN02996	491	fatty acyl-CoA reductase	84.97
KOG3011	293	consensus Ubiquitin-conjugating enzyme [Posttransl	84.96
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	84.94
PLN02527	306	aspartate carbamoyltransferase	84.91
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	84.78
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	84.78
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	84.67
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	84.6
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	84.27
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	84.11
PLN00016	378	RNA-binding protein; Provisional	83.92
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	83.91
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	83.68
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	83.67
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	83.63
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	83.42
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	83.29
PRK06223	307	malate dehydrogenase; Reviewed	83.29
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	83.15
PRK04284	332	ornithine carbamoyltransferase; Provisional	83.07
PRK11730	715	fadB multifunctional fatty acid oxidation complex	82.9
PRK11891	429	aspartate carbamoyltransferase; Provisional	82.75
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	82.6
PLN02342	348	ornithine carbamoyltransferase	82.55
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	82.36
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	82.28
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	82.22
PLN02306	386	hydroxypyruvate reductase	82.22
PLN02602	350	lactate dehydrogenase	82.07
KOG2380	480	consensus Prephenate dehydrogenase (NADP+) [Amino	82.02
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	81.83
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	81.77
PRK00856	305	pyrB aspartate carbamoyltransferase catalytic subu	81.58
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	81.52
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	81.48
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	81.41
PRK06436	303	glycerate dehydrogenase; Provisional	81.25
PLN02206	442	UDP-glucuronate decarboxylase	81.16
COG1484	254	DnaC DNA replication protein [DNA replication, rec	80.99
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	80.95
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	80.91
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	80.88
PRK07201	657	short chain dehydrogenase; Provisional	80.87
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	80.84
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	80.76
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	80.74
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	80.7
COG1250	307	FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo	80.68
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	80.6
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	80.57
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	80.57
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	80.52
PRK03562	621	glutathione-regulated potassium-efflux system prot	80.47
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	80.41
PTZ00117	319	malate dehydrogenase; Provisional	80.4
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	80.35
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	80.3
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	80.1
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	80.07
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	80.05
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	80.03
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	80.03

>PLN02869 fatty aldehyde decarbonylase

Probab=100.00  E-value=2.4e-168  Score=1350.57  Aligned_cols=506  Identities=71%  Similarity=1.253  Sum_probs=488.0

Q ss_pred             CCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHH
Q 009674            3 IPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIP   82 (529)
Q Consensus         3 ~~p~~~~lP~W~~~g~i~~lll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iP   82 (529)
                      ++|+++++|.|+++|+++.+++|+++.|++|||+||++|++++||++|++||++.+|+|+++.++++.|.+.+.+++.+|
T Consensus       112 ~~p~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~HkvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IP  191 (620)
T PLN02869        112 ILPGASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIP  191 (620)
T ss_pred             hhhhhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCCCCCchhhhcCcHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999866667888888888899


Q ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcCCCCCccCCcchhhhhcC
Q 009674           83 LVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYG  162 (529)
Q Consensus        83 ll~~~~lg~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~~~~NYG~~~~lWDrLFG  162 (529)
                      +++..+++..++.++++|+++.++.++++|||+|++|+++++.+|+++|+++||++|++||+++++|||.+|++||++||
T Consensus       192 Lllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPsfHdlHHs~fd~NYGlfF~~WDrLFG  271 (620)
T PLN02869        192 LLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYG  271 (620)
T ss_pred             HHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchheecCchHHhHHhccCCcCcccchHHHHhccC
Confidence            99887777778899999999999999999999999999888888999999999999999999999999999999999999


Q ss_pred             CCCCCCchHHHHhhhcCCccccccCCCCceeeecccCCccccccccchhhhhccCCccccccCcchhhcchhhHHHHHHH
Q 009674          163 TIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSV  242 (529)
Q Consensus       163 T~~~~~~~~~~~~~~~~~~~~~~~~~~pd~V~l~H~~~~~s~~h~~~~~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~~  242 (529)
                      |+++++++++++...  +.++     +||||||||+||++|+||+||||||+||+||+     ++||||||||+|+++|+
T Consensus       272 T~d~~s~~l~e~~~~--~~~~-----~pd~V~l~H~t~~~s~~h~~~~~~s~as~p~~-----~~~~l~~~wp~~~~~m~  339 (620)
T PLN02869        272 TMDKSSDTLYEKSLK--RPEE-----IPDVVHLTHLTTPDSIYHLRLGFASLASKPYI-----SKWYLRLMWPVTSWSMM  339 (620)
T ss_pred             CCCCCchhHHHHhhc--Cccc-----CCCEEEEeccCCHHHhhccchHHHHhccCCcc-----chhHHHHHHHHHHHHHH
Confidence            999999999999988  4343     99999999999999999999999999999999     99999999999999999


Q ss_pred             HHHHHhcceEEEeecccCcccceeEEeeccCcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCcee
Q 009674          243 LVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIY  322 (529)
Q Consensus       243 ~~~~~~~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~  322 (529)
                      ++ |+|||||++|+|+|||+++|||+||||||||++|+++|+||++||+||++|||+|+||+|||+|||+|+|||+|++|
T Consensus       340 ~~-w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad~~Gvkv~sLg~LNk~~~LN~~G~l~  418 (620)
T PLN02869        340 LT-WIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKVLSLGLLNQGEELNRYGELY  418 (620)
T ss_pred             HH-HHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHHhcCCEEEechhcchhhhhcCCceEe
Confidence            99 79999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCcc-cc
Q 009674          323 LERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPV-EA  401 (529)
Q Consensus       323 ~~k~p~~L~irvv~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~-~~  401 (529)
                      |+|||+ ||||||||||||||||+|+||++++|||++|||+  |||||||.+|||||||++..++|||++||+|++. ++
T Consensus       419 v~k~p~-L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~s--K~~raia~~lc~r~i~~~t~~~~~~~~~~~~~~~~~~  495 (620)
T PLN02869        419 IHRNPK-LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYFIASALCQRGIQVATFREDEYEKLNKKLPNTEC  495 (620)
T ss_pred             eecCCC-cceEEEeCCchHHHHHHHhcCCCCceEEEecCcc--HHHHHHHHHHHhcCCeEeecCHHHHHHHHHhccchhh
Confidence            999999 9999999999999999999999999999999996  9999999999999999655899999999999888 89


Q ss_pred             ccceeeecccccCcceEEEEcCcCChhhhhcCCCCceeecccccCccCCCCCceeecCCccccCCCCccccccccccCcc
Q 009674          402 QHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR  481 (529)
Q Consensus       402 ~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r  481 (529)
                      |+||+++|++   +||+|||||+++++||+||||||+||||||+|+++.||||+|.++|||++|+++||++|||||||||
T Consensus       496 ~~~l~~~~~~---~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~R~dC~Y~~~pam~~p~~~~~~~sce~~l~r~  572 (620)
T PLN02869        496 GSKLLLSKNY---SEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFYHTTPAMMSPKSFENVDSCENWLPRR  572 (620)
T ss_pred             hhhEEEeecc---CceeEEecCCCCHHHHhhCCCCCeecccccCCchhhhccccccCCccccCChhhcccchhhccccch
Confidence            9999999998   9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHhhHhhhhcCCCCCccchh-hhhHHHHHHHHHhcCCccCCCC
Q 009674          482 VMSAWRIAGIIHALEGWDLNECGQT-MCDIHQVWHASLRHGFRPLFPV  528 (529)
Q Consensus       482 ~~~Ac~a~~~v~alEgw~~~e~G~i-v~~id~i~~aa~kHGF~p~~~~  528 (529)
                      +|+||||||||||||||++|||| | |++||++|+||+||||+|+...
T Consensus       573 v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~  619 (620)
T PLN02869        573 AMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP  619 (620)
T ss_pred             hhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence            99999999999999999999999 8 9999999999999999998754

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=3.2e-67  Score=484.54  Aligned_cols=164  Identities=61%  Similarity=1.106  Sum_probs=160.0

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccccCcceEEEEcCcCChhhhhcCCC
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPK  435 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~  435 (529)
                      |||+|+++  |||||||.+||||||||+|.++|+|++||++++.++++||++++++   ++|+|||||+||++||++|||
T Consensus         1 V~L~G~~s--KvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~---~~K~WlVGd~l~~~EQ~~Ap~   75 (164)
T PF12076_consen    1 VFLTGNTS--KVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSY---QAKTWLVGDGLTEEEQKWAPK   75 (164)
T ss_pred             Ceeccccc--HHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCC---CceeEEeCCCCCHHHHhcCCC
Confidence            79999995  9999999999999999999999999999999999999999999998   679999999999999999999


Q ss_pred             CceeecccccCccCCCCCceeecCCccccCCCCccccccccccCcchhHHHHHhhHhhhhcCCCCCccchhhhhHHHHHH
Q 009674          436 GTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWH  515 (529)
Q Consensus       436 G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEgw~~~e~G~iv~~id~i~~  515 (529)
                      ||+|||||||||+++||||+|+++|||++|++++|+||||||||||+|+||||||||||||||++||||.-|++||++|+
T Consensus        76 Gt~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~  155 (164)
T PF12076_consen   76 GTHFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWE  155 (164)
T ss_pred             CCEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999933999999999


Q ss_pred             HHHhcCCcc
Q 009674          516 ASLRHGFRP  524 (529)
Q Consensus       516 aa~kHGF~p  524 (529)
                      ||++|||+|
T Consensus       156 AAl~HGF~P  164 (164)
T PF12076_consen  156 AALKHGFRP  164 (164)
T ss_pred             HHHHcCCCC
Confidence            999999998

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=100.00  E-value=7.8e-39  Score=317.34  Aligned_cols=234  Identities=21%  Similarity=0.242  Sum_probs=189.3

Q ss_pred             cchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccC-CceeeecCCCCcc-eeeecCChhHHHHHHhcCcC----
Q 009674          278 LPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRN-GEIYLERQPNKLK-IKVVDGSSLAAAVVVNSLPK----  351 (529)
Q Consensus       278 ~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~-g~~~~~k~p~~L~-irvv~Gnsltaavv~~~i~~----  351 (529)
                      +-++.|++.|.+.+|++.|+|.|++|++||+|+|   +.++ |...+.|+|. +. +|+|||||+||+++|+++.+    
T Consensus        85 ~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e-~t~~~~ttgns~Tayaa~r~Vl~~~~~  160 (351)
T COG5322          85 LRSRPKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVE-LTFTRFTTGNSHTAYAACRQVLKHFAQ  160 (351)
T ss_pred             HhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceE-EEEEecccCCccchHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999   5553 3355679999 98 99999999999999999977    


Q ss_pred             -----CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe------cchhhHHHHHhhCccccccceeeeccccc--Ccce
Q 009674          352 -----TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT------ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTK  417 (529)
Q Consensus       352 -----~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l------~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~  417 (529)
                           ..++|.+|||||  +||++||+||+ +-++++++      +++++++.||++++.+.    +-+++++.  .+..
T Consensus       161 lGidlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~----i~s~d~~~~~e~i~  234 (351)
T COG5322         161 LGIDLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGK----IMSLDYALPQEDIL  234 (351)
T ss_pred             hCcCHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCe----eeeccccccccceE
Confidence                 488999999999  99999999999 88888887      67778888888888777    22335554  4557


Q ss_pred             EEEE----cCcCChhhhhcCCCCceeecccc---cCcc-CCCCCceeecCCccccCCC--CccccccccccCcchhHHHH
Q 009674          418 IWLV----GDDLTGKEQARAPKGTIFIPYTQ---IPPR-KLRKDCFYHSTPAMIIPPS--LSNMHSCENWLGRRVMSAWR  487 (529)
Q Consensus       418 vwiv----g~~~~~~~q~~a~~G~~f~~~~~---~~~~-~~R~dc~y~~~~a~~~P~~--~~~~~~~e~~~p~r~~~Ac~  487 (529)
                      +|++    |-.|.|+.+   +||...+|=..   +++. +-|.|+..++++.+.-|.+  |..+...+|  |.|+++||.
T Consensus       235 v~vAs~~~g~~I~pq~l---kpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~~~~~--p~~~l~aCl  309 (351)
T COG5322         235 VWVASMPKGVEIFPQHL---KPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMKIVGM--PVRQLFACL  309 (351)
T ss_pred             EEEeecCCCceechhhc---cCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHHHccc--chhhHHHHH
Confidence            7995    444555555   66666666552   3333 4445666777777766665  666665555  999999999


Q ss_pred             HhhHhhhhcCCCCC-ccch-h-hhhHHHHHHHHHhcCCccCC
Q 009674          488 IAGIIHALEGWDLN-ECGQ-T-MCDIHQVWHASLRHGFRPLF  526 (529)
Q Consensus       488 a~~~v~alEgw~~~-e~G~-i-v~~id~i~~aa~kHGF~p~~  526 (529)
                      ||+||+++|||++| +||| | +|||++|.++|.||||+|+.
T Consensus       310 AEtlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~  351 (351)
T COG5322         310 AETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD  351 (351)
T ss_pred             HHHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999 5999 8 99999999999999999964

>PRK14982 acyl-ACP reductase; Provisional

Probab=100.00  E-value=3.1e-38  Score=327.63  Aligned_cols=263  Identities=15%  Similarity=0.195  Sum_probs=205.8

Q ss_pred             HhcceEEEeecccCcc---cceeEEe--eccCcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCce
Q 009674          247 IYGRTFVSESNTLDKL---KLQTWVV--PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI  321 (529)
Q Consensus       247 ~~~~~f~~~~~~~~~~---~~~~w~~--pr~~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~  321 (529)
                      ....+|++++-.++--   ..+-|.|  |-.+=|- ...+.|.+.|+|++|+..|+|.|++|++||++++   +.+++ .
T Consensus        35 ~~~~p~~~~~~~v~S~~g~~~eg~~i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~-~  109 (340)
T PRK14982         35 CSAPPQLVDHIEVTSATGQTIEGKYIESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFEN-F  109 (340)
T ss_pred             hhCCCeEeeeEEEEeCCCCEEEEEEEeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCC-c
Confidence            4346899999888544   4477876  3333233 4446666767799999999999999999999999   66555 3


Q ss_pred             eeecCCC--Ccce---eeecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhc-cCc-EEEe-
Q 009674          322 YLERQPN--KLKI---KVVDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQ-MGI-KVAT-  384 (529)
Q Consensus       322 ~~~k~p~--~L~i---rvv~Gnsltaavv~~~i~~---------~~~~V~~~Gatg~~kig~ava~~L~~-~~~-~v~l-  384 (529)
                      .+.++.+  .+++   +|||||||||++.+++++.         ..++|+|+||+|  +||+.+|+.|++ .|+ ++++ 
T Consensus       110 ~~~~~~~~r~i~ie~~~~TtGNs~T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv  187 (340)
T PRK14982        110 NLLQHKQVRNTTLEWERFTTGNTHTAYVICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLV  187 (340)
T ss_pred             ccccccccccceeccccccCCchhHHHHHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEE
Confidence            3332211  1445   8999999999999998875         368999999999  999999999984 454 6666 


Q ss_pred             -cchhhHHHHHhhCccccccceeeeccccc--CcceE--EEEcC----cCChhhhhcCCCCceeecccccCcc----CCC
Q 009674          385 -ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKI--WLVGD----DLTGKEQARAPKGTIFIPYTQIPPR----KLR  451 (529)
Q Consensus       385 -~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~v--wivg~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R  451 (529)
                       |++++++.+++++..+.      +.++.+  +.+++  ++.+.    .+++++.   ++|.++||.+ +|+.    .-|
T Consensus       188 ~R~~~rl~~La~el~~~~------i~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l---~~~~~viDiA-vPRDVd~~v~~  257 (340)
T PRK14982        188 ARQQERLQELQAELGGGK------ILSLEEALPEADIVVWVASMPKGVEIDPETL---KKPCLMIDGG-YPKNLDTKVQG  257 (340)
T ss_pred             cCCHHHHHHHHHHhcccc------HHhHHHHHccCCEEEECCcCCcCCcCCHHHh---CCCeEEEEec-CCCCCCcccCC
Confidence             88899999998865332      233432  44444  44443    4888877   8999999999 5554    445


Q ss_pred             CCceeecCCccccCCCCc-cc-cccccccCcchhHHHHHhhHhhhhcCCCCC-ccch--h-hhhHHHHHHHHHhcCCccC
Q 009674          452 KDCFYHSTPAMIIPPSLS-NM-HSCENWLGRRVMSAWRIAGIIHALEGWDLN-ECGQ--T-MCDIHQVWHASLRHGFRPL  525 (529)
Q Consensus       452 ~dc~y~~~~a~~~P~~~~-~~-~~~e~~~p~r~~~Ac~a~~~v~alEgw~~~-e~G~--i-v~~id~i~~aa~kHGF~p~  525 (529)
                      +|+++.+++.+++|.+++ ++ ...|+++|+|+++||+||+||++||||++| ++||  | ++||++|.++|+||||+|+
T Consensus       258 ~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~  337 (340)
T PRK14982        258 PGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPL  337 (340)
T ss_pred             CCEEEEeCCccccCCCcCccHHHHHhccchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCccc
Confidence            999999999999999977 33 346799999999999999999999999999 5997  8 9999999999999999996


Q ss_pred             C
Q 009674          526 F  526 (529)
Q Consensus       526 ~  526 (529)
                      -
T Consensus       338 ~  338 (340)
T PRK14982        338 L  338 (340)
T ss_pred             c
Confidence            4

>COG3000 ERG3 Sterol desaturase [Lipid metabolism]

Probab=99.94  E-value=8.5e-27  Score=235.73  Aligned_cols=151  Identities=27%  Similarity=0.437  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 009674           18 VILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASF   97 (529)
Q Consensus        18 ~i~~lll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~si~~v   97 (529)
                      +++++++.+++.|+++||.||+.|+.++||++|+.||++.+++++|+.+.||+|.++......+|+.++.    .++.++
T Consensus        95 ~~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~~----~~~~~~  170 (271)
T COG3000          95 FALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLLG----LSPVAV  170 (271)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHhc----CCHHHH
Confidence            5677888899999999999999999999999999999999999999999999999999877667766542    466777


Q ss_pred             HHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcCC--CCCccCCcchhhhhcCCCCCCCchHHHHh
Q 009674           98 VGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEKS  175 (529)
Q Consensus        98 ~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~~--~~NYG~~~~lWDrLFGT~~~~~~~~~~~~  175 (529)
                      ..+.++..+...++|||++. | +.   .+++++++.+|++|++||+++  ++|||.++++|||+|||+.++.++..+++
T Consensus       171 ~~~~~~~~~~~~~~H~~~~~-~-~~---~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~~  245 (271)
T COG3000         171 ALLFIFLLFWAVLIHSNLDL-P-LP---LGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDKI  245 (271)
T ss_pred             HHHHHHHHHHHHHHhcCccc-c-CC---cccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCcccc
Confidence            77777788899999999986 3 22   356677889999999999997  49999999999999999999988877775


Q ss_pred             hh
Q 009674          176 LK  177 (529)
Q Consensus       176 ~~  177 (529)
                      ..
T Consensus       246 ~~  247 (271)
T COG3000         246 GV  247 (271)
T ss_pred             cc
Confidence            54

>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]

Probab=99.89  E-value=2.6e-23  Score=208.58  Aligned_cols=161  Identities=24%  Similarity=0.343  Sum_probs=133.7

Q ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHH-HHHHH
Q 009674            5 PSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPL   83 (529)
Q Consensus         5 p~~~~lP~W~~~g~i~~lll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l-~~iPl   83 (529)
                      |.-..+|.|-.  ++..+++++++.|+++||.||++|++++|+.+|++||....|...++.+.||+|+++.++. +..|+
T Consensus       109 ~~~~plPt~~~--~l~~l~i~~liEd~~fY~~HRL~H~~~~Yk~iHKvHHe~taPf~~sa~YaHp~E~~~lg~~~~~~p~  186 (283)
T KOG0873|consen  109 PSGAPLPSWKE--MLAQLVVFFLIEDIGFYWSHRLFHHKWLYKYIHKVHHEYTAPFGLSAEYAHPLEHLFLGLGTVMGPA  186 (283)
T ss_pred             CcCCCCCcHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhhhhcccCchhHhhhhcCHHHHHHcCChhhhhhH
Confidence            33355888888  9999999999999999999999999999999999999999999999999999999987752 33343


Q ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcCCCCCccCCcchhhhhcCC
Q 009674           84 VTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGT  163 (529)
Q Consensus        84 l~~~~lg~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~~~~NYG~~~~lWDrLFGT  163 (529)
                      +    ++ +++.+.+++.++..+.....||||++ |+++.+.+|+    -.+.++|++||..+.+||+..|..||+|+||
T Consensus       187 ~----~~-~H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pf----y~ga~~HD~HH~~f~~n~~~~f~~~D~i~GT  256 (283)
T KOG0873|consen  187 L----LC-GHVITLWIWIALRILETVESHSGYDF-PWSLSKLIPF----YGGAEHHDYHHLVFIGNFASVFGYLDRIHGT  256 (283)
T ss_pred             H----hh-hHHHHHHHHHHHHHHHHhhccCCCCC-CccccccCcc----cCCCcccchhhhhccccccchhHHHHHHhcc
Confidence            3    33 38888888888888888899999997 8887776664    3589999999999999999999999999999


Q ss_pred             CCCCC--chHHHHhhh
Q 009674          164 IDRSS--DSVYEKSLK  177 (529)
Q Consensus       164 ~~~~~--~~~~~~~~~  177 (529)
                      .....  .+..++..+
T Consensus       257 d~~~~~~k~~~~~~~~  272 (283)
T KOG0873|consen  257 DSTYRALKELKEAIKK  272 (283)
T ss_pred             CccHhhhhhHHHHHHH
Confidence            76433  334444443

>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]

Probab=99.87  E-value=8.4e-23  Score=202.69  Aligned_cols=144  Identities=21%  Similarity=0.365  Sum_probs=120.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 009674           16 DGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIA   95 (529)
Q Consensus        16 ~g~i~~lll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~si~   95 (529)
                      +..++.+.++++..||.+||.||.+|++.+||+.|+.||+++..+|+++.++||++.++.+    +|-.+..+..+.+..
T Consensus       126 ~~~~~~i~~flfF~Df~iYw~HR~lH~~~vy~~LH~~HH~~~~~tpfAslafhpidg~lqa----ip~~I~~Fi~Plh~~  201 (312)
T KOG0872|consen  126 FLLFVSIFLFLFFTDFGIYWAHRELHHRGVYKRLHKPHHIWNICTPFASLAFHPIDGFLQA----IPYHIYPFIFPLHKV  201 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcchhhhhhccCchhhhhcCcchhHhhh----chhHheeeeecchHH
Confidence            3478888888999999999999999999999999999999999999999999999998765    455555544455666


Q ss_pred             HHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcCCCCCccCCcchhhhhcCCCCCCCchHHH
Q 009674           96 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYE  173 (529)
Q Consensus        96 ~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~~~~NYG~~~~lWDrLFGT~~~~~~~~~~  173 (529)
                      +.+....+..++..+.|.+.-.          -+...+++|++|..||.+++.|||.++.+|||+|||++.|.++.++
T Consensus       202 t~L~l~~f~~iwt~~IHd~~~~----------~l~~~ingaahHtvHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d  269 (312)
T KOG0872|consen  202 TYLSLFTFVNIWTISIHDGIYG----------SLNPPINGAAHHTVHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFD  269 (312)
T ss_pred             HHHHHHHHHHhHheeeeccccc----------cccCccccccccceeeeeEecCCCcEEEeHHhccCcccCccccccc
Confidence            6665556668888899998632          1233578999999999999999999999999999999988776555

>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]

Probab=99.72  E-value=5.4e-19  Score=171.05  Aligned_cols=147  Identities=20%  Similarity=0.348  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhch-hhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHH-HHHHHHHHHHhhhhhHH
Q 009674           18 VILTILVHMGPVEFLYYWFHRALHH-HYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIA   95 (529)
Q Consensus        18 ~i~~lll~llv~Df~~Yw~HRllH~-~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l-~~iPll~~~~lg~~si~   95 (529)
                      ....++..+++.|.|.|++||.+|. +.||+.+|++||+-.+|....+.+.||+|.++...+ -++..++   .| .|+-
T Consensus       122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~gla~l~---sg-lspr  197 (287)
T KOG0874|consen  122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGGLAFLL---SG-LSPR  197 (287)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhchHHHHHH---cC-CCcc
Confidence            3456777788999999999999996 789999999999999999999999999999987643 2222222   12 2333


Q ss_pred             HHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcC--CCCCcc-CCcchhhhhcCCCCCCCchHH
Q 009674           96 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYS-LFMPIYDYIYGTIDRSSDSVY  172 (529)
Q Consensus        96 ~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~--~~~NYG-~~~~lWDrLFGT~~~~~~~~~  172 (529)
                      ...++..+..+-..-.|||+- .|..+|+++     +-+...||++||..  .++||+ .||.+||+++|||.+.+-|..
T Consensus       198 ~aiifFtfaTiKTVDDHCGy~-lP~dpfqm~-----F~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~  271 (287)
T KOG0874|consen  198 TAIIFFTFATIKTVDDHCGYW-LPGDPFQMF-----FPNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR  271 (287)
T ss_pred             ceEEEEEeeeeeeeccccccc-cCCCceeEe-----ccCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence            322222222333456999995 488766642     34689999999998  689998 589999999999988776554


Q ss_pred             HH
Q 009674          173 EK  174 (529)
Q Consensus       173 ~~  174 (529)
                      .+
T Consensus       272 ~e  273 (287)
T KOG0874|consen  272 LE  273 (287)
T ss_pred             cc
Confidence            44

>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases

Probab=99.69  E-value=4.8e-17  Score=141.47  Aligned_cols=113  Identities=28%  Similarity=0.437  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 009674           23 LVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYII  102 (529)
Q Consensus        23 ll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~~lg~~si~~v~~y~i  102 (529)
                      ++.+++.|+++||+||++|..+++|++|+.||++++++++++.+.+|+|.++..++   ++++...++..+...++++.+
T Consensus         2 ~~~~l~~d~~~Y~~HRl~H~~~~l~~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   78 (114)
T PF04116_consen    2 LLGFLLWDFWEYWMHRLLHKIPFLWRIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA   78 (114)
T ss_pred             eeeHHHHHHHHHHHHHHHhcCchHHHHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence            34567899999999999995444449999999999999999999999999987653   332222334456777777888


Q ss_pred             HHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhc
Q 009674          103 YVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT  144 (529)
Q Consensus       103 ~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~  144 (529)
                      +..+.+.++|+|+.. +     ..+.++++..+|++|++||+
T Consensus        79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~  114 (114)
T PF04116_consen   79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS  114 (114)
T ss_pred             HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence            888999999999821 1     12456778899999999995

Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=99.37  E-value=3e-12  Score=122.68  Aligned_cols=166  Identities=14%  Similarity=0.083  Sum_probs=117.1

Q ss_pred             ecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccc
Q 009674          335 VDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH  403 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~---------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~  403 (529)
                      |+||++|||++++.+.+         ..++|+++|+||  .+|+++++.|+++|.+|.+  |+.++.+++.+++....+.
T Consensus         1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~   78 (194)
T cd01078           1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE   78 (194)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence            68999999999988875         246999999999  9999999999999999988  8889999888776433222


Q ss_pred             cee--eeccc---cc--CcceEEE----EcCcCChhhhhcCC-CCceeecccccCcc-----CCCCCceeecCCccccCC
Q 009674          404 NLV--LSTSY---AA--HKTKIWL----VGDDLTGKEQARAP-KGTIFIPYTQIPPR-----KLRKDCFYHSTPAMIIPP  466 (529)
Q Consensus       404 ~l~--~~~~~---~~--~~~~vwi----vg~~~~~~~q~~a~-~G~~f~~~~~~~~~-----~~R~dc~y~~~~a~~~P~  466 (529)
                      .+.  ...+.   ++  ++++++|    .|.. .+.+..+.+ +|.+++|+...|+.     +.|+|.++.+++...-| 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~-~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~-  156 (194)
T cd01078          79 GVGAVETSDDAARAAAIKGADVVFAAGAAGVE-LLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA-  156 (194)
T ss_pred             cEEEeeCCCHHHHHHHHhcCCEEEECCCCCce-echhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe-
Confidence            212  12222   22  5677776    3332 122222233 48999999954443     56899999998733212 


Q ss_pred             CCccccccccccCcchhHHHHHhhHhhhhcCCCCCccchhhhhHHHHHHHHHhc
Q 009674          467 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRH  520 (529)
Q Consensus       467 ~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEgw~~~e~G~iv~~id~i~~aa~kH  520 (529)
                            ...+++|+++.+||++|.|.  +|++..+        .++|-+.|+||
T Consensus       157 ------~~~~g~~~~~~~~~~ae~~~--~~~~~~~--------~~~~~~~~~~~  194 (194)
T cd01078         157 ------IGVGGLKMKTHRACIAKLFE--SNPLVLD--------AEEIYDLAKEM  194 (194)
T ss_pred             ------eccchhHHHHHHHHHHHHhh--cCCeeec--------hHHHHHHHhcC
Confidence                  13478999999999999998  4765443        55666666665

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN02434 fatty acid hydroxylase

Probab=99.04  E-value=1.9e-09  Score=107.68  Aligned_cols=136  Identities=20%  Similarity=0.270  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHh-hch-------hhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHH--
Q 009674           18 VILTILVHMGPVEFLYYWFHRA-LHH-------HYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM--   87 (529)
Q Consensus        18 ~i~~lll~llv~Df~~Yw~HRl-lH~-------~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~--   87 (529)
                      .+..+++.+++..+.+|.+||. +|.       ..+....|..||..  |.......++|.-.++....+..++..++  
T Consensus        83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~--P~D~~rLv~PP~~~~~l~~~~~~l~~~~~~~  160 (237)
T PLN02434         83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKH--PMDGLRLVFPPAATAILCVPFWNLIALFATP  160 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcC--CCCCCCeecCcHHHHHHHHHHHHHHHHHcch
Confidence            3455667788899999999997 685       12334679999977  44444455777665444332222111110  


Q ss_pred             Hhh-hhhHHHHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcC-CCCCccCCcchhhhhcCCCC
Q 009674           88 VLK-NASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID  165 (529)
Q Consensus        88 ~lg-~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~-~~~NYG~~~~lWDrLFGT~~  165 (529)
                      ..+ ..-...+.+|+. .+......|.+   .|+.     ++++   .--++|..||-+ .+.|||...++||++|||+-
T Consensus       161 ~~a~~~~~G~l~gYl~-Yd~~Hy~lH~~---~p~~-----~~~r---~lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~  228 (237)
T PLN02434        161 ATAPALFGGGLLGYVM-YDCTHYFLHHG---QPST-----DVLR---NLKKYHLNHHFRDQDKGFGITSSLWDRVFGTLP  228 (237)
T ss_pred             hHHHHHHHHHHHHHHH-HHHHHHHHHhc---Ccch-----HHHH---HHHHHHHHHcCCCCCCCCCcCchHHHHhcCCCC
Confidence            000 011123455654 45666677764   2421     1222   246999999977 79999999999999999984


Q ss_pred             CC
Q 009674          166 RS  167 (529)
Q Consensus       166 ~~  167 (529)
                      ++
T Consensus       229 ~~  230 (237)
T PLN02434        229 PS  230 (237)
T ss_pred             Cc
Confidence            43

>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]

Probab=98.17  E-value=6.1e-06  Score=80.68  Aligned_cols=136  Identities=19%  Similarity=0.272  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHh-hchhh---------hhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHHH--
Q 009674           20 LTILVHMGPVEFLYYWFHRA-LHHHY---------LYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM--   87 (529)
Q Consensus        20 ~~lll~llv~Df~~Yw~HRl-lH~~~---------Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~--   87 (529)
                      .-+++.++...+.+|.+||+ +|..+         +---+|..||..  |..-.-..++|.-..+....+..++..+.  
T Consensus        85 ~~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hfl~HGcHHk~--P~D~~RLVfPP~~~~il~~pfy~~~~~vl~~  162 (240)
T KOG0539|consen   85 GLFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHFLIHGCHHKL--PMDGYRLVFPPTPFAILAAPFYLILSLVLPH  162 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHHHHhcccccC--CCCCceEecCCchHHHHHHHHHHHHHHhcCc
Confidence            34556677899999999998 57641         112469999977  22233356777766655544433333221  


Q ss_pred             Hhh-hhhHHHHHHHHHHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcC-CCCCccCCcchhhhhcCCCC
Q 009674           88 VLK-NASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID  165 (529)
Q Consensus        88 ~lg-~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~-~~~NYG~~~~lWDrLFGT~~  165 (529)
                      ..+ ..-...+++|+.|....=.+.|.+-   |+.     +.+   -..-++|.-||-+ .+..||....+||++|||+-
T Consensus       163 ~~~~a~faG~l~GYV~YDmtHYyLHhg~p---~~~-----~~~---~~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl~  231 (240)
T KOG0539|consen  163 PVAPAGFAGGLLGYVCYDMTHYYLHHGSP---PKR-----PYL---KHLKKYHLNHHFKHQDLGFGITSSLWDYVFGTLG  231 (240)
T ss_pred             chhhhhhccchhhhhhhhhhhhhhhcCCC---CCc-----hHH---HHHHHHHhhhhhhccccCccccHHHHHHHhccCC
Confidence            000 0111345677765433333444431   221     222   2346899999976 89999999999999999986


Q ss_pred             CCC
Q 009674          166 RSS  168 (529)
Q Consensus       166 ~~~  168 (529)
                      ...
T Consensus       232 ~~~  234 (240)
T KOG0539|consen  232 PLK  234 (240)
T ss_pred             CCc
Confidence            654

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.51  E-value=0.0002  Score=65.42  Aligned_cols=92  Identities=21%  Similarity=0.241  Sum_probs=64.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE----Ec
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VG  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg  422 (529)
                      ..++|+++||.   ..|++++.+|.+.|.+ +++  |+.+|.++|.++.+... -..+...++.+  .+++++|    +|
T Consensus        11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~-~~~~~~~~~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVN-IEAIPLEDLEEALQEADIVINATPSG   86 (135)
T ss_dssp             TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCS-EEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred             CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccc-cceeeHHHHHHHHhhCCeEEEecCCC
Confidence            57899999995   7999999999988988 777  99999999999873322 11122334443  5678877    44


Q ss_pred             -CcCChhhhhcCCCCc-eeecccccCcc
Q 009674          423 -DDLTGKEQARAPKGT-IFIPYTQIPPR  448 (529)
Q Consensus       423 -~~~~~~~q~~a~~G~-~f~~~~~~~~~  448 (529)
                       ..++++.....++.. +++|.+ +|+.
T Consensus        87 ~~~i~~~~~~~~~~~~~~v~Dla-~Pr~  113 (135)
T PF01488_consen   87 MPIITEEMLKKASKKLRLVIDLA-VPRD  113 (135)
T ss_dssp             STSSTHHHHTTTCHHCSEEEES--SS-S
T ss_pred             CcccCHHHHHHHHhhhhceeccc-cCCC
Confidence             356677775554444 899998 6665

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.41  E-value=0.00049  Score=74.28  Aligned_cols=140  Identities=19%  Similarity=0.164  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHHHHHhhchhhhhhhhcccCCCCCCCCccc---------ccccCcHHHHHHHHHHHHHHHHHHHh-hhh
Q 009674           23 LVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPIT---------SVIHPFAEHIVYFLLFAIPLVTTMVL-KNA   92 (529)
Q Consensus        23 ll~llv~Df~~Yw~HRllH~~~Ly~r~H~~HHss~~p~p~t---------a~~~hplE~ll~~~l~~iPll~~~~l-g~~   92 (529)
                      +..+++.|..+=.+|-+.|....+.|.|..||....++..-         ..++.+.|.++...+..+|..+.... ...
T Consensus        13 ~~~~~~~~~~~d~~h~~~h~~~~l~~~h~~hh~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   92 (406)
T PRK07424         13 LGSILWVEIVRDSYHALAHQWNPLYRLHNWHHRVFRPDLSVVSEEIYRKAHWYNDVPEALVMLLFGTLPVLLLQQWNVPY   92 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHHhHHhhcCCcCCcccHHHHhhhhhhcCCHHHHHHHHHhhHHHHHHhhhcccc
Confidence            34456677777778888887666679999999998765332         45888999776654433333322211 000


Q ss_pred             hHHH--HHHHHHHHH---HH---HHhcc-ccee--ecccccccccCcchhcccChhhhhhhhcCCC-CCccCCcchhhhh
Q 009674           93 SIAS--FVGYIIYVD---FM---NNMGH-CNFE--FIPMWLFTVFPPLKFLMYTPSYHSLHHTQFR-TNYSLFMPIYDYI  160 (529)
Q Consensus        93 si~~--v~~y~i~~~---~~---~~l~H-sn~e--~~P~~~f~~lp~L~yli~tP~~H~lHH~~~~-~NYG~~~~lWDrL  160 (529)
                      .+..  -..|.+.+.   +.   ..... ++-+  -.|+. +...|  +..+..+.||..||-..+ .-||..+++.|+.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~d~~h~~~~-~~~~~--~~~~v~~~~h~rh~~~~~~~~~~~~~~~~d~~  169 (406)
T PRK07424         93 GWLAWLGVLYTLTFLFGAIARGLGLPNADELTDLTHLPGP-FETLP--SQWFVNRPYHWRHHFDNQNAYYCGTFTLVDKL  169 (406)
T ss_pred             cchhhhhhHHHHHHHHHHHHHhcccccccccccccCCCCc-ccCCC--ccCeecCceeEEEEeccccceeeeeEEEeehh
Confidence            0000  011222121   11   11112 1011  11321 22221  224678899999998754 7889999999999


Q ss_pred             cCCCC
Q 009674          161 YGTID  165 (529)
Q Consensus       161 FGT~~  165 (529)
                      .||..
T Consensus       170 ~~ta~  174 (406)
T PRK07424        170 MGTAL  174 (406)
T ss_pred             cCccc
Confidence            99964

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.38  E-value=0.00035  Score=71.40  Aligned_cols=50  Identities=16%  Similarity=0.240  Sum_probs=45.6

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  402 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~  402 (529)
                      ...+.++++||++  -||+++|+.|+++|..|+|  |++||+++|++++....+
T Consensus         4 ~~~~~~lITGASs--GIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~   55 (265)
T COG0300           4 MKGKTALITGASS--GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG   55 (265)
T ss_pred             CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC
Confidence            3567899999997  9999999999999999999  999999999999887663

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.37  E-value=0.00025  Score=71.49  Aligned_cols=44  Identities=25%  Similarity=0.323  Sum_probs=41.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +-|+++||++  -||.|+|+.|++.|.+|.+  |++||+++|+++++.
T Consensus         7 kv~lITGASS--GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~   52 (246)
T COG4221           7 KVALITGASS--GIGEATARALAEAGAKVVLAARREERLEALADEIGA   52 (246)
T ss_pred             cEEEEecCcc--hHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence            6789999996  9999999999999999999  999999999999886

>PLN02601 beta-carotene hydroxylase

Probab=97.26  E-value=0.002  Score=65.60  Aligned_cols=132  Identities=21%  Similarity=0.323  Sum_probs=73.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhcccCCCCCCCCcccccccCcHHHHHHHHHHHHHHHHH
Q 009674            8 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRA-LHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTT   86 (529)
Q Consensus         8 ~~lP~W~~~g~i~~lll~llv~Df~~Yw~HRl-lH~~~Ly~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~   86 (529)
                      .++|.-..-+.+..++..++.+|++-+|.||. +|-  +.|..|+-||.... .++-  ..+     ++++++++|.+.+
T Consensus       126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG--~LW~lH~sHH~Pr~-g~FE--~ND-----lFaVifAvpAIaL  195 (303)
T PLN02601        126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD--SLWNMHESHHKPRE-GAFE--LND-----VFAIVNAVPAIGL  195 (303)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cchhhhhhcCCCCC-CCcc--ccc-----chhhhhHHHHHHH
Confidence            34554222223444456677899999999997 676  34788999998764 2222  111     1223344444444


Q ss_pred             HHhhhhh------H-----HHHHHHH-HHHHHHHHhcccceeecccccccccCcchhcccChhhhhhhhcC--CCCCccC
Q 009674           87 MVLKNAS------I-----ASFVGYI-IYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL  152 (529)
Q Consensus        87 ~~lg~~s------i-----~~v~~y~-i~~~~~~~l~Hsn~e~~P~~~f~~lp~L~yli~tP~~H~lHH~~--~~~NYG~  152 (529)
                      ++.|..+      .     ..+.+|. +|+...+.+.|--+.+.|   ..+-|+++.   -..-|.+||+.  ...+||.
T Consensus       196 ~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHDgLVHqRfp~~~---~a~~~Y~rr---l~~AHklHHa~Ke~Gv~FGf  269 (303)
T PLN02601        196 LYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGP---IANVPYLRK---VAAAHQLHHTDKFKGVPYGL  269 (303)
T ss_pred             HHHhhccccccHHHHHHHHHhHHHHHHHHHHHhhhhhccccccCC---CCCCHHHHH---HHHHHHhhccCCcCCccceE
Confidence            4333210      0     1122232 355556667776433221   122244444   56899999984  5789998


Q ss_pred             Ccc
Q 009674          153 FMP  155 (529)
Q Consensus       153 ~~~  155 (529)
                      ++.
T Consensus       270 ll~  272 (303)
T PLN02601        270 FLG  272 (303)
T ss_pred             Eec
Confidence            754

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.11  E-value=0.00062  Score=70.68  Aligned_cols=47  Identities=17%  Similarity=0.283  Sum_probs=42.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  402 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~  402 (529)
                      .=.+|+|||.  +||++-|+-|||||.+|.|  |+++||+.+++|+.+...
T Consensus        50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~   98 (312)
T KOG1014|consen   50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK   98 (312)
T ss_pred             CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC
Confidence            4567889997  9999999999999999999  999999999999877664

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.06  E-value=0.0011  Score=71.69  Aligned_cols=153  Identities=17%  Similarity=0.231  Sum_probs=97.0

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--c-
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G-  422 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g-  422 (529)
                      ...++|+++|+ |  .+|+.++++|...|. +|++  |+.++.+.++++++...    +...++.+  ..++++|.  | 
T Consensus       180 ~~~~~vlViGa-G--~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIGA-G--EMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEA----IPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEECc-h--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcE----eeHHHHHHHhccCCEEEECCCC
Confidence            35679999998 6  999999999998897 6776  88889888888865321    22233332  56677662  2 


Q ss_pred             --CcCChhhhhcC-----CCCceeecccccCcc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhh
Q 009674          423 --DDLTGKEQARA-----PKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAG  490 (529)
Q Consensus       423 --~~~~~~~q~~a-----~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~  490 (529)
                        -.+++++...+     .++.+++|.+ +|+. +  +.  +++.+.      .=++++.  .++.....|.-.+-.|+.
T Consensus       253 ~~~~i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~------~vDdl~~--~~~~n~~~r~~~~~~a~~  323 (423)
T PRK00045        253 PHPIIGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLY------DVDDLQE--IVEENLAQRQEAAEKAEA  323 (423)
T ss_pred             CCcEEcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEE------EHHHHHH--HHHhhHHHHHHHHHHHHH
Confidence              24556665443     3568899998 6554 1  11  233211      1112221  244566678888899999


Q ss_pred             Hhh----hhcCCCCC-ccch-h--h-hhHHHHHHHHHh
Q 009674          491 IIH----ALEGWDLN-ECGQ-T--M-CDIHQVWHASLR  519 (529)
Q Consensus       491 ~v~----alEgw~~~-e~G~-i--v-~~id~i~~aa~k  519 (529)
                      ||-    .|+.|... .... |  + +++++|-+.-++
T Consensus       324 ii~~~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el~  361 (423)
T PRK00045        324 IVEEEVAEFMEWLRSLEVVPTIRALREQAEEIREEELE  361 (423)
T ss_pred             HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence            986    67778655 5666 5  4 777666554443

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.05  E-value=0.0017  Score=65.80  Aligned_cols=124  Identities=17%  Similarity=0.194  Sum_probs=78.6

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  412 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~  412 (529)
                      |||-....+.--.......+.|+++|+ |  -+|+++|..|++.|.+|.+  |+.++.+++.+++....  . +...++.
T Consensus        99 TD~~G~~~~l~~~~~~~~~k~vliiGa-G--g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~--~-~~~~~~~  172 (270)
T TIGR00507        99 TDGIGLVSDLERLIPLRPNQRVLIIGA-G--GAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG--E-IQAFSMD  172 (270)
T ss_pred             CCHHHHHHHHHhcCCCccCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC--c-eEEechh
Confidence            667776666321122334578999999 6  8999999999999999888  88889998888764321  1 1111222


Q ss_pred             --c-CcceEEE----Ec--CcCC--hhhhhcCCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674          413 --A-HKTKIWL----VG--DDLT--GKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       413 --~-~~~~vwi----vg--~~~~--~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  464 (529)
                        . .+++++|    +|  ..++  +-+....++|.+++|.+=.|++     +.| +.|.+..+..|-+
T Consensus       173 ~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~  241 (270)
T TIGR00507       173 ELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAKSLGTKTIDGLGMLV  241 (270)
T ss_pred             hhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeeeCCHHHHH
Confidence              2 4567777    22  1111  1112345788899999865554     223 6788888777754

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.05  E-value=0.0018  Score=66.14  Aligned_cols=125  Identities=15%  Similarity=0.121  Sum_probs=78.0

Q ss_pred             eecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeee-
Q 009674          334 VVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLS-  408 (529)
Q Consensus       334 vv~Gnsltaavv~-~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~-  408 (529)
                      =|||-...++.-- .......++|+|+|+ |  -+|++++.+|.+.| .+|++  |+.++.+++++++.....   +.+ 
T Consensus       103 NTD~~G~~~~l~~~~~~~~~~k~vlVlGa-G--g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~---~~~~  176 (278)
T PRK00258        103 NTDGIGFVRALEERLGVDLKGKRILILGA-G--GAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK---AELD  176 (278)
T ss_pred             cccHHHHHHHHHhccCCCCCCCEEEEEcC-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc---eeec
Confidence            3667666666542 123345678999998 6  89999999999999 67888  999999999888653211   112 


Q ss_pred             cccc-c-CcceEEE----EcC----cCChhhhhcCCCCceeecccccCcc-C----CC-CCceeecCCcccc
Q 009674          409 TSYA-A-HKTKIWL----VGD----DLTGKEQARAPKGTIFIPYTQIPPR-K----LR-KDCFYHSTPAMII  464 (529)
Q Consensus       409 ~~~~-~-~~~~vwi----vg~----~~~~~~q~~a~~G~~f~~~~~~~~~-~----~R-~dc~y~~~~a~~~  464 (529)
                      .+.. . ..++++|    +|-    ..+|-+....++++.++|++--|.. .    .| +-|.+..+..|-+
T Consensus       177 ~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~  248 (278)
T PRK00258        177 LELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAKAQGARTIDGLGMLV  248 (278)
T ss_pred             ccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCcCeecCCHHHHH
Confidence            1222 2 4567777    332    1223333455778888888743322 1    12 5566666666643

>PLN00203 glutamyl-tRNA reductase

Probab=96.88  E-value=0.0036  Score=69.72  Aligned_cols=210  Identities=15%  Similarity=0.207  Sum_probs=125.8

Q ss_pred             HHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcC----cC---CCcEEEE
Q 009674          287 SLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSL----PK---TTAHVLL  358 (529)
Q Consensus       287 ~~I~~Ai~~A~k~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i----~~---~~~~V~~  358 (529)
                      .+|-+|...|++.|.-    | .||.   |=.. .+.+.|.-. =+.++-.|..=.+.++++-.    +.   ..++|+|
T Consensus       201 gQVK~A~~~A~~~g~~----g~~L~~---LF~~-Ai~~~KrVR-teT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkVlV  271 (519)
T PLN00203        201 AQVKQVVKVGQGVDGF----GRNLSG---LFKH-AITAGKRVR-TETNIASGAVSVSSAAVELALMKLPESSHASARVLV  271 (519)
T ss_pred             HHHHHHHHHHHHcCCc----cHHHHH---HHHH-HHHHHHHHh-hccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEEEE
Confidence            4578888899888742    2 2222   1111 244444422 22445555443333333332    32   3689999


Q ss_pred             ecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cC-cCChh
Q 009674          359 RGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD-DLTGK  428 (529)
Q Consensus       359 ~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~-~~~~~  428 (529)
                      +|+ |  ++|+++++.|..+|. +|++  |+.++.+.++++.+. .........++.+  .+++++|.    ++ .++++
T Consensus       272 IGA-G--~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~e  347 (519)
T PLN00203        272 IGA-G--KMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKPLDEMLACAAEADVVFTSTSSETPLFLKE  347 (519)
T ss_pred             EeC-H--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeecHhhHHHHHhcCCEEEEccCCCCCeeCHH
Confidence            999 6  999999999998886 5777  899999999988642 1111011223332  66777662    22 57777


Q ss_pred             hhhcCCC-------CceeecccccCcc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhHhh---
Q 009674          429 EQARAPK-------GTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH---  493 (529)
Q Consensus       429 ~q~~a~~-------G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~---  493 (529)
                      ..+.+++       ..+|+|.+ +|+. +  +.  +++.+..      -+|++.  .++-.+..|.-.+=.|+.||-   
T Consensus       348 ~l~~~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lyd------iDdL~~--i~~~n~~~R~~~~~~Ae~II~ee~  418 (519)
T PLN00203        348 HVEALPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYN------VDDLKE--VVAANKEDRLRKAMEAQTIIREES  418 (519)
T ss_pred             HHHHhhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEE------eccHHH--HHHHhHHHHHHHHHHHHHHHHHHH
Confidence            7777654       25899999 8876 2  21  2222111      123332  245567777777777888875   


Q ss_pred             -hhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 009674          494 -ALEGWDLN-ECGQ-T--M-CDIHQVWHASL  518 (529)
Q Consensus       494 -alEgw~~~-e~G~-i--v-~~id~i~~aa~  518 (529)
                       +|+.|... +... |  + ++.+.|-+.-+
T Consensus       419 ~~F~~w~~~~~~~p~I~~lr~~~~~i~~~El  449 (519)
T PLN00203        419 KNFEAWRDSLETVPTIKKLRSYAERIRAAEL  449 (519)
T ss_pred             HHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence             78888766 6777 5  4 77776655443

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.82  E-value=0.0081  Score=62.75  Aligned_cols=140  Identities=14%  Similarity=0.114  Sum_probs=88.8

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  369 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~  369 (529)
                      .|+|+++-=-=|....+-.-.+..+.-+|+ +.-+-+.||+.+|+       |++.+-+ +++.++|.++|+-   .+|+
T Consensus        64 ~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a~  140 (325)
T PRK08618         64 LGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQAK  140 (325)
T ss_pred             EEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHHH
Confidence            588887752222212222111245555544 45599999999985       3334555 5678899999998   7999


Q ss_pred             HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCC-hh-hhhcCCCCceeec
Q 009674          370 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-GK-EQARAPKGTIFIP  441 (529)
Q Consensus       370 ava~~L~-~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~~-~q~~a~~G~~f~~  441 (529)
                      +.+.+|+ .+++ +|.+  |++++.+++.+++..+.+.......++++  ++++++|....-. |. + .+.++|++++.
T Consensus       141 ~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~  219 (325)
T PRK08618        141 GQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKKGVHINA  219 (325)
T ss_pred             HHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCCCcEEEe
Confidence            9999887 4454 4444  99999999988765443333223446664  7788877433222 21 2 56799999987


Q ss_pred             c
Q 009674          442 Y  442 (529)
Q Consensus       442 ~  442 (529)
                      +
T Consensus       220 i  220 (325)
T PRK08618        220 V  220 (325)
T ss_pred             c
Confidence            7

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.73  E-value=0.0031  Score=58.70  Aligned_cols=35  Identities=26%  Similarity=0.307  Sum_probs=32.5

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~  392 (529)
                      |+|+||||  .+|+.+++.|.++|.+|..  |++++.++
T Consensus         1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~~~~~   37 (183)
T PF13460_consen    1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPSKAED   37 (183)
T ss_dssp             EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred             eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence            78999999  9999999999999999999  88887775

...

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.63  E-value=0.0072  Score=55.17  Aligned_cols=123  Identities=15%  Similarity=0.140  Sum_probs=72.9

Q ss_pred             cCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 009674          336 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  412 (529)
Q Consensus       336 ~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~  412 (529)
                      ||-.+..|.--.++....++|.++|+ |  .+|+++++.|++.| .+|.+  |+.++.+++.+++.... .. ....+.+
T Consensus         2 d~~g~~~a~~~~~~~~~~~~i~iiG~-G--~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~   76 (155)
T cd01065           2 DGLGFVRALEEAGIELKGKKVLILGA-G--GAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IA-IAYLDLE   76 (155)
T ss_pred             CHHHHHHHHHhhCCCCCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cc-eeecchh
Confidence            44444444443344455678999998 7  99999999999885 67777  88888888877754321 00 1123443


Q ss_pred             c--CcceEEEE--cCcC---Chh--hhhcCCCCceeecccccCcc-----CCC-CCceeecCCccc
Q 009674          413 A--HKTKIWLV--GDDL---TGK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMI  463 (529)
Q Consensus       413 ~--~~~~vwiv--g~~~---~~~--~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~  463 (529)
                      +  .+++++|.  ....   ++.  ....+++|+.++|.+-+|+.     +.| ..+.+..+..|-
T Consensus        77 ~~~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~  142 (155)
T cd01065          77 ELLAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEML  142 (155)
T ss_pred             hccccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHH
Confidence            2  56667662  1111   110  11235788888888766552     233 456665555553

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.58  E-value=0.012  Score=60.77  Aligned_cols=125  Identities=16%  Similarity=0.189  Sum_probs=77.5

Q ss_pred             HHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHH
Q 009674          295 EADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVA  372 (529)
Q Consensus       295 ~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava  372 (529)
                      .|+++|++|+.+-..+.   +.      + .|.    +.+   -..+.+.+++..+  -..++|.++|. |  .+|+++|
T Consensus       108 ~a~~~gi~v~~~~~~~~---va------~-~n~----~~~---Ae~ai~~al~~~~~~l~gk~v~IiG~-G--~iG~avA  167 (287)
T TIGR02853       108 LAADAGVKLIELFERDD---VA------I-YNS----IPT---AEGAIMMAIEHTDFTIHGSNVMVLGF-G--RTGMTIA  167 (287)
T ss_pred             HHHHCCCeEEEEEeccc---eE------E-Ecc----HhH---HHHHHHHHHHhcCCCCCCCEEEEEcC-h--HHHHHHH
Confidence            67788888887665321   21      1 110    000   1123334444432  24679999999 4  8999999


Q ss_pred             HHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc---CcCChhhhhcCCCCceeecccc
Q 009674          373 SSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---DDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       373 ~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg---~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                      +.|...|.+|++  |+.++.+.+++. ....    +...++++  ++++++|.-   ..++.+...++++|++++|.+-
T Consensus       168 ~~L~~~G~~V~v~~R~~~~~~~~~~~-g~~~----~~~~~l~~~l~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas  241 (287)
T TIGR02853       168 RTFSALGARVFVGARSSADLARITEM-GLIP----FPLNKLEEKVAEIDIVINTIPALVLTADVLSKLPKHAVIIDLAS  241 (287)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHC-CCee----ecHHHHHHHhccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCc
Confidence            999999999998  777766655432 1110    11224443  566776632   2356777888999999999993

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.52  E-value=0.0033  Score=68.08  Aligned_cols=210  Identities=11%  Similarity=0.111  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 009674          285 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR  359 (529)
Q Consensus       285 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~-----~~~~V~~~  359 (529)
                      |=.+|-+|...|++.|.-=--   ||.   |=.. .+.+.|.-. =+.++-.|..=.+.++++-..+     ..++|+|+
T Consensus       116 IlgQVK~A~~~A~~~g~~g~~---L~~---lf~~-A~~~aKrVr-teT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi  187 (414)
T PRK13940        116 ILGQVKDSYTLSKKNHAIGKE---LDR---VFQK-VFATAKRVR-SETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII  187 (414)
T ss_pred             HHHHHHHHHHHHHHcCCchHH---HHH---HHHH-HHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence            444588899999888863211   222   1111 244445533 3356666665555555555433     45789999


Q ss_pred             cccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC-----cCChhh
Q 009674          360 GTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKE  429 (529)
Q Consensus       360 Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~  429 (529)
                      |+ |  .+|+++|.+|+..|+ ++++  |+.++-++|.++.+...   .+...++.+  .+++++|...     .|+.++
T Consensus       188 Ga-G--~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~---~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~  261 (414)
T PRK13940        188 GA-G--QTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS---AHYLSELPQLIKKADIIIAAVNVLEYIVTCKY  261 (414)
T ss_pred             cC-c--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe---EecHHHHHHHhccCCEEEECcCCCCeeECHHH
Confidence            99 5  899999999999986 4666  88899999998865311   111224433  5677877322     345544


Q ss_pred             hhcCCCCceeecccccCcc-C--CC--CCceeecCCccccCCCCccccccccccCcchhHHHHHhhHhh----hhcCCCC
Q 009674          430 QARAPKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDL  500 (529)
Q Consensus       430 q~~a~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~----alEgw~~  500 (529)
                      .+  .+..+++|.+ +|+. +  +.  +++.+..--      +++.  .++-.+..|...+=.|+.||-    .++.|..
T Consensus       262 ~~--~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iD------dl~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~  330 (414)
T PRK13940        262 VG--DKPRVFIDIS-IPQALDPKLGELEQNVYYCVD------DINA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEK  330 (414)
T ss_pred             hC--CCCeEEEEeC-CCCCCCccccCcCCeEEEeHH------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            32  3567999999 7766 2  21  222222111      1111  133345566666667777765    6777865


Q ss_pred             C-ccch-h--h-hhHHHHHHHHHh
Q 009674          501 N-ECGQ-T--M-CDIHQVWHASLR  519 (529)
Q Consensus       501 ~-e~G~-i--v-~~id~i~~aa~k  519 (529)
                      . .+.. |  + ++.++|-+..++
T Consensus       331 ~~~~~p~I~~lr~~~~~i~~~el~  354 (414)
T PRK13940        331 AIISNSAIKELFQKADGLVDLSLE  354 (414)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHH
Confidence            5 5666 5  4 777777554443

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.38  E-value=0.0083  Score=62.01  Aligned_cols=139  Identities=21%  Similarity=0.245  Sum_probs=88.9

Q ss_pred             ecCChhHHHHHHhcCcCC--CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec
Q 009674          335 VDGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST  409 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~--~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~  409 (529)
                      |||-.+.-+-.=+.++.+  .++|++.||-|   -++||+..|.+.|+ ++++  |+.+|.++|++..++... . ++..
T Consensus       106 TD~~G~~~~L~~~~~~~~~~~~~vlilGAGG---AarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~-~~~~  180 (283)
T COG0169         106 TDGIGFLRALKEFGLPVDVTGKRVLILGAGG---AARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-A-VEAA  180 (283)
T ss_pred             CCHHHHHHHHHhcCCCcccCCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-c-cccc
Confidence            677776666655565544  48999999998   48999999999995 5777  999999999998665432 1 1122


Q ss_pred             ---ccccC-cceEEE----EcCcCCh----hhhhcCCCCceeecccccCcc-----CCC-CCceeecCCccccCCCCccc
Q 009674          410 ---SYAAH-KTKIWL----VGDDLTG----KEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNM  471 (529)
Q Consensus       410 ---~~~~~-~~~vwi----vg~~~~~----~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~~  471 (529)
                         +++.. +.+++|    +|-.-.+    -+-.-.++++++.|+.=.|.+     ..| +=|.+.++..|-+-   |+.
T Consensus       181 ~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~---Qaa  257 (283)
T COG0169         181 ALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVH---QAA  257 (283)
T ss_pred             cccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHH---HHH
Confidence               23223 467777    2221111    001234888888888855544     223 56778888777664   444


Q ss_pred             cccccccCcc
Q 009674          472 HSCENWLGRR  481 (529)
Q Consensus       472 ~~~e~~~p~r  481 (529)
                      .++|-|.+.+
T Consensus       258 ~aF~lwtg~~  267 (283)
T COG0169         258 EAFELWTGVE  267 (283)
T ss_pred             HHHHHHhCCC
Confidence            4555555443

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.35  E-value=0.011  Score=66.62  Aligned_cols=59  Identities=19%  Similarity=0.363  Sum_probs=48.7

Q ss_pred             CChhHHHHHHhcCcC-----CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          337 GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       337 Gnsltaavv~~~i~~-----~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      |.+.....+.+.+|+     +.+.|+|+||+|  .||+++++.|+++|.+|.+  |+.++.+.+.+++
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l  124 (576)
T PLN03209         59 GATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV  124 (576)
T ss_pred             cchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence            556666777777875     356899999999  9999999999999999987  8988888776654

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.0091  Score=58.34  Aligned_cols=46  Identities=22%  Similarity=0.255  Sum_probs=40.4

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +...+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++
T Consensus         6 ~~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l   53 (258)
T PRK06949          6 NLEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRAEI   53 (258)
T ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            34567899999998  9999999999999999988  8889988887765

>PRK09186 flagellin modification protein A; Provisional

Probab=96.27  E-value=0.0091  Score=58.28  Aligned_cols=45  Identities=18%  Similarity=0.231  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus         4 ~k~vlItGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~   50 (256)
T PRK09186          4 GKTILITGAGG--LIGSALVKAILEAGGIVIAADIDKEALNELLESLGK   50 (256)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHh
Confidence            46899999998  9999999999999999998  888888877776543

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.27  E-value=0.01  Score=56.62  Aligned_cols=88  Identities=19%  Similarity=0.270  Sum_probs=61.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec--CcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDL  425 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~  425 (529)
                      .-++|+|+|--   ++|+.||+.|...|.+|++...|....||... .++     ++.++++  .+++++|  -|  +.|
T Consensus        22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf-----~v~~~~~a~~~adi~vtaTG~~~vi   92 (162)
T PF00670_consen   22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGF-----EVMTLEEALRDADIFVTATGNKDVI   92 (162)
T ss_dssp             TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT------EEE-HHHHTTT-SEEEE-SSSSSSB
T ss_pred             CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCc-----EecCHHHHHhhCCEEEECCCCcccc
Confidence            56789999987   99999999999999999996667777776663 333     2445553  5667766  34  568


Q ss_pred             ChhhhhcCCCCceeecccccCcc
Q 009674          426 TGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       426 ~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      +.|+...+|.|++++....++-+
T Consensus        93 ~~e~~~~mkdgail~n~Gh~d~E  115 (162)
T PF00670_consen   93 TGEHFRQMKDGAILANAGHFDVE  115 (162)
T ss_dssp             -HHHHHHS-TTEEEEESSSSTTS
T ss_pred             CHHHHHHhcCCeEEeccCcCcee
Confidence            99999999999999998876655

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=96.26  E-value=0.026  Score=58.66  Aligned_cols=132  Identities=13%  Similarity=0.045  Sum_probs=89.7

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcCcCCCcEEEEecccCchhhHHH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVANA  370 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i~~~~~~V~~~Gatg~~kig~a  370 (529)
                      .|+|+++-+   .    |+-.++.+.-+|+ +.-..+.||+.+|+       |+..+-..++.+.+.++|+-   ..|+.
T Consensus        62 ~g~K~~~~~---~----~~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~~  131 (301)
T PRK06407         62 AGLKTYIAG---R----NGARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAET  131 (301)
T ss_pred             eEEEEEecC---C----CCccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHHH
Confidence            577776642   1    2222355555555 44589999999986       45556566788999999987   89999


Q ss_pred             HHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE----EcCc-CChhhhhcCCCCcee
Q 009674          371 VASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDD-LTGKEQARAPKGTIF  439 (529)
Q Consensus       371 va~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~-~~~~~q~~a~~G~~f  439 (529)
                      -++++|  +.-.+|.+  |++++.+++.+++....+..+.-+.+.++  ++++|++    ..+. ++.+   |.+||+|+
T Consensus       132 ~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~---~l~pg~hV  208 (301)
T PRK06407        132 QLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRK---YLGDEYHV  208 (301)
T ss_pred             HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHH---HcCCCceE
Confidence            999999  55555666  99999999988876544334223346664  7888877    2222 3444   34789998


Q ss_pred             eccc
Q 009674          440 IPYT  443 (529)
Q Consensus       440 ~~~~  443 (529)
                      ..+-
T Consensus       209 ~aiG  212 (301)
T PRK06407        209 NLAG  212 (301)
T ss_pred             EecC
Confidence            8873

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=96.24  E-value=0.022  Score=59.36  Aligned_cols=140  Identities=18%  Similarity=0.101  Sum_probs=85.9

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674          298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  368 (529)
Q Consensus       298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig  368 (529)
                      -.|+|+++.--=|....+..-.++.+.-+++ +.-+-+.||+.+|+       |+..+-+ |++...+.++|+-   ..|
T Consensus        64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~QA  140 (313)
T PF02423_consen   64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQA  140 (313)
T ss_dssp             EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HHH
T ss_pred             EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HHH
Confidence            5788888854434433333333455555544 34488999999984       3333333 6678899999987   999


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cC---cCChhhhhcCCC
Q 009674          369 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD---DLTGKEQARAPK  435 (529)
Q Consensus       369 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~---~~~~~~q~~a~~  435 (529)
                      +.-+++|+  +.-.+|.+  |++++.+++.+++.. .+.....+.+.++  ++++|++.    .+   .++.+   |.++
T Consensus       141 ~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~---~l~~  216 (313)
T PF02423_consen  141 RWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAE---WLKP  216 (313)
T ss_dssp             HHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GG---GS-T
T ss_pred             HHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHH---HcCC
Confidence            99999998  55445555  999999999999777 4445335557774  88888772    22   34444   4589


Q ss_pred             Cceeecccc
Q 009674          436 GTIFIPYTQ  444 (529)
Q Consensus       436 G~~f~~~~~  444 (529)
                      |+++..+.-
T Consensus       217 g~hi~~iGs  225 (313)
T PF02423_consen  217 GTHINAIGS  225 (313)
T ss_dssp             T-EEEE-S-
T ss_pred             CcEEEEecC
Confidence            999888875

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.21  E-value=0.014  Score=55.74  Aligned_cols=85  Identities=15%  Similarity=0.142  Sum_probs=56.8

Q ss_pred             hhHHHHHHhcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccC
Q 009674          339 SLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH  414 (529)
Q Consensus       339 sltaavv~~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~  414 (529)
                      ++++.-.++++..  ..++|+|+|+..  -+|..+|.+|.++|.+|++  |+.+   ++++.+                +
T Consensus        28 ~~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~~---~l~~~l----------------~   86 (168)
T cd01080          28 PAGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKTK---NLKEHT----------------K   86 (168)
T ss_pred             HHHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCch---hHHHHH----------------h
Confidence            4444445555543  689999999963  4699999999999999888  4322   222211                2


Q ss_pred             cceEEE----EcCcCChhhhhcCCCCceeecccccCcc
Q 009674          415 KTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       415 ~~~vwi----vg~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      +++++|    ..+.+++++.   ++|++++|++ +|+.
T Consensus        87 ~aDiVIsat~~~~ii~~~~~---~~~~viIDla-~prd  120 (168)
T cd01080          87 QADIVIVAVGKPGLVKGDMV---KPGAVVIDVG-INRV  120 (168)
T ss_pred             hCCEEEEcCCCCceecHHHc---cCCeEEEEcc-CCCc
Confidence            344544    2235677655   7899999999 7775

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=96.19  E-value=0.05  Score=57.02  Aligned_cols=140  Identities=17%  Similarity=0.153  Sum_probs=91.0

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674          298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  368 (529)
Q Consensus       298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig  368 (529)
                      -.|+|+++.--=|....|-.-.++.+.-+|. +.-+-+.||+.+|+       |++.+-+ +++.++|.++|+-   ..|
T Consensus        64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~qA  140 (325)
T TIGR02371        64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQA  140 (325)
T ss_pred             eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHH
Confidence            4688888753333323333334456666655 45599999999985       2333545 5678899999987   899


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-c---Cc-CChhhhhcCCCCc
Q 009674          369 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-G---DD-LTGKEQARAPKGT  437 (529)
Q Consensus       369 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-g---~~-~~~~~q~~a~~G~  437 (529)
                      ++-+++|+  +...+|.+  |++++.+.+.+++.+ .+.....+.+.++  ++++|++. -   +. ++++   +.+||+
T Consensus       141 ~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~-~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~---~l~~g~  216 (325)
T TIGR02371       141 WTQLEALSRVFDLEEVSVYCRTPSTREKFALRASD-YEVPVRAATDPREAVEGCDILVTTTPSRKPVVKAD---WVSEGT  216 (325)
T ss_pred             HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh-hCCcEEEeCCHHHHhccCCEEEEecCCCCcEecHH---HcCCCC
Confidence            99888877  66667777  999999998887642 2222112336664  78877662 1   22 2333   459999


Q ss_pred             eeecccc
Q 009674          438 IFIPYTQ  444 (529)
Q Consensus       438 ~f~~~~~  444 (529)
                      +++.+..
T Consensus       217 ~v~~vGs  223 (325)
T TIGR02371       217 HINAIGA  223 (325)
T ss_pred             EEEecCC
Confidence            9998863

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.18  E-value=0.038  Score=57.35  Aligned_cols=139  Identities=12%  Similarity=0.091  Sum_probs=91.3

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674          298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  368 (529)
Q Consensus       298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig  368 (529)
                      -.|+|+++.--=|..+.|..-.+..+.-+|+ +.-.-+.||+.+|+       |+..+-+ +++.++|.++|+-   ..|
T Consensus        61 ~~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa  137 (304)
T PRK07340         61 LAITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQA  137 (304)
T ss_pred             ccEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence            3588887743333323333334466666655 45599999999985       3445555 5678899999994   899


Q ss_pred             HHHHHHHhc-cC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE----EcCcCChhhhhcCCCCce
Q 009674          369 NAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLTGKEQARAPKGTI  438 (529)
Q Consensus       369 ~ava~~L~~-~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~~~~q~~a~~G~~  438 (529)
                      ++.+++||. ++ .++.+  |++++.+++.+++... ... +...+.++  ++++|+|    ..+.+=++   +.+||++
T Consensus       138 ~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~-~~~-~~~~~~~~av~~aDiVitaT~s~~Pl~~~---~~~~g~h  212 (304)
T PRK07340        138 RAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL-GPT-AEPLDGEAIPEAVDLVVTATTSRTPVYPE---AARAGRL  212 (304)
T ss_pred             HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-CCe-eEECCHHHHhhcCCEEEEccCCCCceeCc---cCCCCCE
Confidence            999999983 55 45666  9999999998887532 112 12345653  7788877    22222222   3489999


Q ss_pred             eecccc
Q 009674          439 FIPYTQ  444 (529)
Q Consensus       439 f~~~~~  444 (529)
                      +..+.-
T Consensus       213 i~~iGs  218 (304)
T PRK07340        213 VVAVGA  218 (304)
T ss_pred             EEecCC
Confidence            988863

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.16  E-value=0.013  Score=60.09  Aligned_cols=61  Identities=16%  Similarity=0.102  Sum_probs=43.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCcceEEEEcCcCChhhhhc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR  432 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~  432 (529)
                      +|+|+||||  -||+.+++.|.++|.+|..  |+.++...++..                  + ..++.||..+++++..
T Consensus         2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~------------------~-v~~v~~Dl~d~~~l~~   60 (317)
T CHL00194          2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW------------------G-AELVYGDLSLPETLPP   60 (317)
T ss_pred             EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc------------------C-CEEEECCCCCHHHHHH
Confidence            699999999  9999999999999999887  766554333211                  1 1245666666666655


Q ss_pred             CCCC
Q 009674          433 APKG  436 (529)
Q Consensus       433 a~~G  436 (529)
                      +-+|
T Consensus        61 al~g   64 (317)
T CHL00194         61 SFKG   64 (317)
T ss_pred             HHCC
Confidence            5555

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.14  E-value=0.016  Score=59.70  Aligned_cols=127  Identities=15%  Similarity=0.102  Sum_probs=73.6

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcccccc-ceeeecc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQH-NLVLSTS  410 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~-~l~~~~~  410 (529)
                      |||-....+.--.......++|++.|+-   -.|+|+|..|++.|+ ++++  |+.++.++|.+++...... ......+
T Consensus       109 TD~~G~~~~l~~~~~~~~~k~vlIlGaG---Gaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~  185 (284)
T PRK12549        109 TDWSGFAESFRRGLPDASLERVVQLGAG---GAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD  185 (284)
T ss_pred             CCHHHHHHHHHhhccCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc
Confidence            5555555444211122345789999997   589999999999998 6777  8999999998876443211 1111123


Q ss_pred             cc-c-CcceEEE----EcCcC---ChhhhhcCCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674          411 YA-A-HKTKIWL----VGDDL---TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       411 ~~-~-~~~~vwi----vg~~~---~~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  464 (529)
                      +. + ++++++|    +|-.-   .|-+....+++..+.|++--|++     ..| +-|....+..|-+
T Consensus       186 ~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~ML~  254 (284)
T PRK12549        186 LAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETELLRAARALGCRTLDGGGMAV  254 (284)
T ss_pred             hHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCHHHHHHHHCCCeEecCHHHHH
Confidence            33 2 5677777    33110   11122335677777777732322     112 4566666666644

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.12  E-value=0.018  Score=59.63  Aligned_cols=87  Identities=17%  Similarity=0.213  Sum_probs=60.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--c-Cc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G-DD  424 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g-~~  424 (529)
                      ..++|+++|+ |  .+|++++..|.+.|.+|++  |+.++.+..++ .+...    +...++++  ++++++|.  . ..
T Consensus       151 ~g~kvlViG~-G--~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~----~~~~~l~~~l~~aDiVI~t~p~~~  222 (296)
T PRK08306        151 HGSNVLVLGF-G--RTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSP----FHLSELAEEVGKIDIIFNTIPALV  222 (296)
T ss_pred             CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCee----ecHHHHHHHhCCCCEEEECCChhh
Confidence            4689999997 5  8999999999999999998  66666554432 32211    11223433  56677662  2 23


Q ss_pred             CChhhhhcCCCCceeecccccCc
Q 009674          425 LTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       425 ~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                      ++.+....+++|++++|++ ..|
T Consensus       223 i~~~~l~~~~~g~vIIDla-~~p  244 (296)
T PRK08306        223 LTKEVLSKMPPEALIIDLA-SKP  244 (296)
T ss_pred             hhHHHHHcCCCCcEEEEEc-cCC
Confidence            6777778899999999999 444

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.09  E-value=0.012  Score=61.02  Aligned_cols=148  Identities=16%  Similarity=0.205  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 009674          285 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR  359 (529)
Q Consensus       285 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~-----~~~~V~~~  359 (529)
                      |=.++.+|...|++.|.-=   ..||.   |=.. -+.+.|.-. -+..+-.|..=++..+++...+     ..++|+++
T Consensus       113 IlgQvk~A~~~a~~~g~~~---~~L~~---lf~~-a~~~~k~vr-~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~Vi  184 (311)
T cd05213         113 ILGQVKNAYKLAKEAGTSG---KLLNR---LFQK-AIKVGKRVR-TETGISRGAVSISSAAVELAEKIFGNLKGKKVLVI  184 (311)
T ss_pred             HHHHHHHHHHHHHHcCCch---HHHHH---HHHH-HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEE
Confidence            3344889999999988621   12222   1111 133333322 2244444443333334444433     47889999


Q ss_pred             cccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCC-h----hh
Q 009674          360 GTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-G----KE  429 (529)
Q Consensus       360 Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~----~~  429 (529)
                      |+ |  .+|+.+++.|+++| .+|++  |+.++.++++++++...    +...++++  ..++++|.-..-. +    ++
T Consensus       185 Ga-G--~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVi~at~~~~~~~~~~~  257 (311)
T cd05213         185 GA-G--EMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNA----VPLDELLELLNEADVVISATGAPHYAKIVER  257 (311)
T ss_pred             Cc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeE----EeHHHHHHHHhcCCEEEECCCCCchHHHHHH
Confidence            98 6  99999999999766 56666  88899999988876421    22224443  5677766322211 1    11


Q ss_pred             hh-cC-CCCceeecccccCcc
Q 009674          430 QA-RA-PKGTIFIPYTQIPPR  448 (529)
Q Consensus       430 q~-~a-~~G~~f~~~~~~~~~  448 (529)
                      .. .. .+|.+++|.+ +|+.
T Consensus       258 ~~~~~~~~~~~viDla-vPrd  277 (311)
T cd05213         258 AMKKRSGKPRLIVDLA-VPRD  277 (311)
T ss_pred             HHhhCCCCCeEEEEeC-CCCC
Confidence            11 11 2578999998 6655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.014  Score=58.02  Aligned_cols=43  Identities=21%  Similarity=0.271  Sum_probs=38.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ++|+|+|++|  -||+++|+.|+++|.+|.+  |++++.++++++.+
T Consensus         3 k~vlVtGasg--~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~   47 (276)
T PRK06482          3 KTWFITGASS--GFGRGMTERLLARGDRVAATVRRPDALDDLKARYG   47 (276)
T ss_pred             CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence            5799999998  9999999999999999988  88888888877654

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.05  E-value=0.018  Score=59.31  Aligned_cols=62  Identities=16%  Similarity=0.190  Sum_probs=43.8

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhCcc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRIPV  399 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~---~~~~~l~~~~~~  399 (529)
                      |||.-...+.--.......+.|+++|| |  -+|+|+|..|.+.|.+ |.+  |+.   ++.+++.+++..
T Consensus       108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-G--GagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~  175 (289)
T PRK12548        108 TDGLGFVRNLREHGVDVKGKKLTVIGA-G--GAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ  175 (289)
T ss_pred             cCHHHHHHHHHhcCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh
Confidence            555555444432233334578999999 5  7999999999999987 877  775   678887777643

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.013  Score=57.63  Aligned_cols=45  Identities=29%  Similarity=0.320  Sum_probs=39.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   54 (253)
T PRK05867          8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIG   54 (253)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  88888888877754

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.011  Score=58.89  Aligned_cols=45  Identities=16%  Similarity=0.193  Sum_probs=39.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         8 ~k~~lItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (263)
T PRK08339          8 GKLAFTTASSK--GIGFGVARVLARAGADVILLSRNEENLKKAREKIKS   54 (263)
T ss_pred             CCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            45789999997  9999999999999999998  888898888777543

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.016  Score=57.49  Aligned_cols=44  Identities=25%  Similarity=0.307  Sum_probs=39.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++.+++.
T Consensus         6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (261)
T PRK08265          6 GKVAIVTGGAT--LIGAAVARALVAAGARVAIVDIDADNGAAVAASLG   51 (261)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            46899999998  9999999999999999998  88888888877763

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.99  E-value=0.013  Score=56.87  Aligned_cols=42  Identities=21%  Similarity=0.306  Sum_probs=35.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  .||+++|+.|+++|.+|.+   |+.++.+++.+++
T Consensus         5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~   49 (250)
T PRK08063          5 KVALVTGSSR--GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI   49 (250)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            5799999998  9999999999999999765   7777777766654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.96  E-value=0.033  Score=62.32  Aligned_cols=122  Identities=17%  Similarity=0.216  Sum_probs=79.3

Q ss_pred             HHHHHHcCCc--EEEecccccc------cccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-------------
Q 009674          293 ILEADAKGVK--VISLGLLNQG------EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-------------  351 (529)
Q Consensus       293 i~~A~k~G~k--v~~LG~ln~~------e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~-------------  351 (529)
                      ...+++.+++  +++...+++.      +.+|..| +.+..-|+ +.. +++    . +.-++.|.-             
T Consensus       170 ~~~v~~~~~~~iiiAips~~~~~~~~i~~~l~~~~-~~v~~lP~-~~~-l~~----~-~~~lreI~ieDLLgR~pV~~d~  241 (588)
T COG1086         170 ERVVEELGIQLILIAIPSASQEERRRILLRLARTG-IAVRILPQ-LTD-LKD----L-NGQLREIEIEDLLGRPPVALDT  241 (588)
T ss_pred             HHHHHHcCCceEEEecCCCCHHHHHHHHHHHHhcC-CcEEecCc-HHH-HHH----h-ccccccCCHHHHhCCCCCCCCH
Confidence            3456777777  7777777766      5677777 77777777 441 111    1 111444421             


Q ss_pred             -------CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeecccccCcceE-EE
Q 009674          352 -------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKI-WL  420 (529)
Q Consensus       352 -------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~v-wi  420 (529)
                             +.++|+++||+|  +||+.+|+-+++.+.+.++   +++-.+..+++++.+..+ +           .++ -+
T Consensus       242 ~~i~~~~~gK~vLVTGagG--SiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~-----------~~~~~~  307 (588)
T COG1086         242 ELIGAMLTGKTVLVTGGGG--SIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-E-----------LKLRFY  307 (588)
T ss_pred             HHHHhHcCCCEEEEeCCCC--cHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-C-----------cceEEE
Confidence                   378999999999  9999999999987877766   777777777777666442 1           122 44


Q ss_pred             EcCcCChhhhhcCCCC
Q 009674          421 VGDDLTGKEQARAPKG  436 (529)
Q Consensus       421 vg~~~~~~~q~~a~~G  436 (529)
                      .||.-+.+-...+-.|
T Consensus       308 igdVrD~~~~~~~~~~  323 (588)
T COG1086         308 IGDVRDRDRVERAMEG  323 (588)
T ss_pred             ecccccHHHHHHHHhc
Confidence            5666666655544444

>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]

Probab=95.93  E-value=0.019  Score=59.87  Aligned_cols=151  Identities=17%  Similarity=0.194  Sum_probs=108.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE----EcCcCC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLT  426 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~  426 (529)
                      -+.++++|-.   ++|.-||.+|--.|-+|.+..-|..-.||.... ++     +++.+++  +..+|.|    --|+|+
T Consensus       214 GKv~Vv~GYG---dVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMe-G~-----~V~tm~ea~~e~difVTtTGc~dii~  284 (434)
T KOG1370|consen  214 GKVAVVCGYG---DVGKGCAQALKGFGARVIVTEIDPICALQAAME-GY-----EVTTLEEAIREVDIFVTTTGCKDIIT  284 (434)
T ss_pred             ccEEEEeccC---ccchhHHHHHhhcCcEEEEeccCchHHHHHHhh-cc-----EeeeHHHhhhcCCEEEEccCCcchhh
Confidence            4455666654   999999999999999999977788888877632 22     3777775  6777877    347889


Q ss_pred             hhhhhcCCCCceeecccccCcc----CCCCC-------------ceeecCCcccc--CCCCccccccccccCcchhHHHH
Q 009674          427 GKEQARAPKGTIFIPYTQIPPR----KLRKD-------------CFYHSTPAMII--PPSLSNMHSCENWLGRRVMSAWR  487 (529)
Q Consensus       427 ~~~q~~a~~G~~f~~~~~~~~~----~~R~d-------------c~y~~~~a~~~--P~~~~~~~~~e~~~p~r~~~Ac~  487 (529)
                      .+...+||.++++|-.-.|+-+    -+|.+             ...+++-.+.+  -+-+-|+. |-.+.|.=+||-.+
T Consensus       285 ~~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~-CatghpSFvmS~sf  363 (434)
T KOG1370|consen  285 GEHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLG-CATGHPSFVMSNSF  363 (434)
T ss_pred             HHHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecc-cccCCCceEEecch
Confidence            9999999999999988775544    22211             11222222221  12366787 99999999999999


Q ss_pred             HhhHhhhhcCCCCCc----cch-h-hhhHHHH
Q 009674          488 IAGIIHALEGWDLNE----CGQ-T-MCDIHQV  513 (529)
Q Consensus       488 a~~~v~alEgw~~~e----~G~-i-v~~id~i  513 (529)
                      .--++.-+|=|++.+    .|- + ..++|+-
T Consensus       364 tnQvlAqIeLwt~p~~kY~~~V~~LPKklDE~  395 (434)
T KOG1370|consen  364 TNQVLAQIELWTAPEGKYKVGVYVLPKKLDEY  395 (434)
T ss_pred             HHHHHHHHHHhcCCCCccccceEecchhhHHH
Confidence            999999999999885    343 3 4788764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.86  E-value=0.019  Score=56.34  Aligned_cols=45  Identities=20%  Similarity=0.213  Sum_probs=38.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..++|+++|++|  .||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         9 ~~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~   55 (255)
T PRK07523          9 TGRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK   55 (255)
T ss_pred             CCCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  88888777766653

>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1

Probab=95.86  E-value=0.014  Score=56.55  Aligned_cols=56  Identities=18%  Similarity=0.349  Sum_probs=41.1

Q ss_pred             HHHHHHhcccceeeccccc--ccccCcchhcccChhhhhhhhcC-CCCCccCCcchhhhhcCCC
Q 009674          104 VDFMNNMGHCNFEFIPMWL--FTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTI  164 (529)
Q Consensus       104 ~~~~~~l~Hsn~e~~P~~~--f~~lp~L~yli~tP~~H~lHH~~-~~~NYG~~~~lWDrLFGT~  164 (529)
                      ......+.|.... .|.+.  .++.+    ++.+|+.|..||.. +++|||....+|+.+....
T Consensus        98 tnq~HkWsH~~~~-~P~~V~~LQ~~g----illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~~  156 (178)
T PF10520_consen   98 TNQFHKWSHTYKS-LPPWVRFLQDAG----ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDKI  156 (178)
T ss_pred             HHHHHHHHcCCCC-CCHHHHHHHHCC----cccCchhhhccccCcccCCeEeecccchHHHHHh
Confidence            3444567888665 46541  12223    56799999999999 9999999999999987654

UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.017  Score=55.99  Aligned_cols=44  Identities=20%  Similarity=0.341  Sum_probs=37.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.++++|++|  .||+++|+.|+++|.+|.+  |++++.+.+.+++.
T Consensus         6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (241)
T PRK07454          6 MPRALITGASS--GIGKATALAFAKAGWDLALVARSQDALEALAAELR   51 (241)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888777766643

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.84  E-value=0.068  Score=55.69  Aligned_cols=137  Identities=21%  Similarity=0.195  Sum_probs=86.5

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  369 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~  369 (529)
                      .|+|+++.--=|....+-.--++.+.-+++ +.-+-+.||+.+|+       |+..+-+ +++.++|.++|+ |  ..|+
T Consensus        62 ~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G--~~a~  138 (314)
T PRK06141         62 IGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-G--RLAS  138 (314)
T ss_pred             eEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-c--HHHH
Confidence            589988843323222222222355666665 35599999999984       2333333 567889999996 5  9999


Q ss_pred             HHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeee-ccccc--CcceEEEE----cCc-CChhhhhcCCCCc
Q 009674          370 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLS-TSYAA--HKTKIWLV----GDD-LTGKEQARAPKGT  437 (529)
Q Consensus       370 ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~-~~~~~--~~~~vwiv----g~~-~~~~~q~~a~~G~  437 (529)
                      .++++|+  +...+|.+  |++++.+++.+++... +.. +.+ .+.++  ++++|++.    .+. ++.   .+.++|+
T Consensus       139 ~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~-g~~-~~~~~~~~~av~~aDIVi~aT~s~~pvl~~---~~l~~g~  213 (314)
T PRK06141        139 LLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ-GFD-AEVVTDLEAAVRQADIISCATLSTEPLVRG---EWLKPGT  213 (314)
T ss_pred             HHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc-CCc-eEEeCCHHHHHhcCCEEEEeeCCCCCEecH---HHcCCCC
Confidence            9999888  44466777  9999999998886432 112 222 35553  67777662    111 333   3458999


Q ss_pred             eeeccc
Q 009674          438 IFIPYT  443 (529)
Q Consensus       438 ~f~~~~  443 (529)
                      ++..+.
T Consensus       214 ~i~~ig  219 (314)
T PRK06141        214 HLDLVG  219 (314)
T ss_pred             EEEeeC
Confidence            766554

>PRK06196 oxidoreductase; Provisional

Probab=95.80  E-value=0.018  Score=58.95  Aligned_cols=56  Identities=16%  Similarity=0.126  Sum_probs=45.7

Q ss_pred             HHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          341 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       341 taavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ++..+++.++...+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        14 ~~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~   71 (315)
T PRK06196         14 TAEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPARRPDVAREALAGID   71 (315)
T ss_pred             cHHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh
Confidence            35555666665567899999998  9999999999999999998  88888887766653

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.021  Score=55.67  Aligned_cols=41  Identities=24%  Similarity=0.372  Sum_probs=34.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~  396 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|++  |++ ++++++.++
T Consensus         2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   45 (251)
T PRK06924          2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISISRTENKELTKLAEQ   45 (251)
T ss_pred             cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc
Confidence            4799999998  9999999999999999988  655 566655544

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.75  E-value=0.02  Score=55.66  Aligned_cols=42  Identities=17%  Similarity=0.249  Sum_probs=37.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  .||+++|+.|.++|.+|.+  |++++.+++++++
T Consensus         5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~   48 (258)
T PRK12429          5 KVALVTGAAS--GIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL   48 (258)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence            6899999998  9999999999999999988  8888888777665

>PRK06046 alanine dehydrogenase; Validated

Probab=95.74  E-value=0.085  Score=55.24  Aligned_cols=141  Identities=16%  Similarity=0.196  Sum_probs=88.8

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674          298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  368 (529)
Q Consensus       298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig  368 (529)
                      ..|+|+++.--=|..+.+..-.++.+.-+++ +.-..+.||+.+|+       |++.+-+ +++.+.|.++|+-   ..|
T Consensus        65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~qa  141 (326)
T PRK06046         65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQA  141 (326)
T ss_pred             eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence            4678888754334333333322355555544 35589999999985       2333555 6688899999987   789


Q ss_pred             HHHHHHHh-ccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc-CcceEEEEcC-----cCChhhhhcCCCCce
Q 009674          369 NAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGD-----DLTGKEQARAPKGTI  438 (529)
Q Consensus       369 ~ava~~L~-~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~-----~~~~~~q~~a~~G~~  438 (529)
                      ++.++.|+ .++++...   |++++.+++++++.+..........++++ ..+++++.-.     .++.+   +.++|++
T Consensus       142 ~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~aDiVv~aTps~~P~~~~~---~l~~g~h  218 (326)
T PRK06046        142 RTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAE---WIKEGTH  218 (326)
T ss_pred             HHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhhCCEEEEecCCCCcEecHH---HcCCCCE
Confidence            99999998 44555544   89999999888865433322112336664 2277755211     12333   4589999


Q ss_pred             eecccc
Q 009674          439 FIPYTQ  444 (529)
Q Consensus       439 f~~~~~  444 (529)
                      +..+.-
T Consensus       219 V~~iGs  224 (326)
T PRK06046        219 INAIGA  224 (326)
T ss_pred             EEecCC
Confidence            988763

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.72  E-value=0.028  Score=60.90  Aligned_cols=152  Identities=19%  Similarity=0.200  Sum_probs=92.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----  421 (529)
                      ..++|+++|+ |  .+|+.++++|.+.| .+|++  |+.++.+++.++++...    +...++.+  ..++++|.     
T Consensus       179 ~~~~VlViGa-G--~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~----i~~~~l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       179 KGKKALLIGA-G--EMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA----VKFEDLEEYLAEADIVISSTGAP  251 (417)
T ss_pred             cCCEEEEECC-h--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE----eeHHHHHHHHhhCCEEEECCCCC
Confidence            4578999998 7  99999999999989 56777  88888888888765421    11224433  56677662     


Q ss_pred             cCcCChhhhhcCC----CCceeecccccCcc-C--C--CCCceeecCCccccCCCCccccccccccCcchhHHHHHhhHh
Q 009674          422 GDDLTGKEQARAP----KGTIFIPYTQIPPR-K--L--RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGII  492 (529)
Q Consensus       422 g~~~~~~~q~~a~----~G~~f~~~~~~~~~-~--~--R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v  492 (529)
                      .-.+++++...+.    ++.+++|.+ +|+. .  .  -+++.+.      .-++++.+  ++-....|.-.+=.|+.||
T Consensus       252 ~~ii~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~------~vDdl~~~--~~~n~~~r~~~~~~a~~ii  322 (417)
T TIGR01035       252 HPIVSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLY------DVDDLQPV--VEENLAERREEAEKAEEIV  322 (417)
T ss_pred             CceEcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEE------EHHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence            2235666665442    356889998 6554 1  1  1222211      11122211  3334555666667888887


Q ss_pred             h----hhcCCCCC-ccch-h--h-hhHHHHHHHHHh
Q 009674          493 H----ALEGWDLN-ECGQ-T--M-CDIHQVWHASLR  519 (529)
Q Consensus       493 ~----alEgw~~~-e~G~-i--v-~~id~i~~aa~k  519 (529)
                      -    +|+.|... ..-. |  + +++++|-+.-++
T Consensus       323 ~~~~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el~  358 (417)
T TIGR01035       323 EEETAEFKQWLRSLEVEPTIKALRSLAEIVREKELE  358 (417)
T ss_pred             HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence            6    77777655 5555 4  3 666666544433

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.021  Score=56.03  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~~lItGas~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~   51 (254)
T PRK07478          6 GKVAIITGASS--GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR   51 (254)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  88888888877653

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.70  E-value=0.014  Score=63.34  Aligned_cols=89  Identities=21%  Similarity=0.272  Sum_probs=68.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG----  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg----  422 (529)
                      ..++|+++||.   ++|.-+|.+|+++|++.++   |+.+|-++|.++++.+.    +...++.+  .++||+|.+    
T Consensus       177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~----~~l~el~~~l~~~DvVissTsa~  249 (414)
T COG0373         177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA----VALEELLEALAEADVVISSTSAP  249 (414)
T ss_pred             ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee----ecHHHHHHhhhhCCEEEEecCCC
Confidence            68899999998   9999999999999966555   99999999999988333    22335554  677888844    


Q ss_pred             -CcCChhhhhcC---CCCceeecccccCcc
Q 009674          423 -DDLTGKEQARA---PKGTIFIPYTQIPPR  448 (529)
Q Consensus       423 -~~~~~~~q~~a---~~G~~f~~~~~~~~~  448 (529)
                       -+|+.++...+   +++.+++|++ +|+.
T Consensus       250 ~~ii~~~~ve~a~~~r~~~livDia-vPRd  278 (414)
T COG0373         250 HPIITREMVERALKIRKRLLIVDIA-VPRD  278 (414)
T ss_pred             ccccCHHHHHHHHhcccCeEEEEec-CCCC
Confidence             34666665554   4447899999 8887

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.69  E-value=0.0071  Score=56.71  Aligned_cols=102  Identities=25%  Similarity=0.311  Sum_probs=66.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--E------
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V------  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--v------  421 (529)
                      ++|-++|- |  .+|+++|+.|.+.|.+|..  |++++.++++++- ..      ...+.++  +.+++++  +      
T Consensus         2 ~~Ig~IGl-G--~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-~~------~~~s~~e~~~~~dvvi~~v~~~~~v   71 (163)
T PF03446_consen    2 MKIGFIGL-G--NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-AE------VADSPAEAAEQADVVILCVPDDDAV   71 (163)
T ss_dssp             BEEEEE---S--HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-EE------EESSHHHHHHHBSEEEE-SSSHHHH
T ss_pred             CEEEEEch-H--HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-hh------hhhhhhhHhhcccceEeecccchhh
Confidence            47889998 4  9999999999999999999  8899999988772 11      1224553  4555544  2      


Q ss_pred             cCcCChhh-hhcCCCCceeecccccCcc-------CCC-CCceeecCCccccC
Q 009674          422 GDDLTGKE-QARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIP  465 (529)
Q Consensus       422 g~~~~~~~-q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P  465 (529)
                      .+.+..++ ...+++|++|++.+-.+|+       .++ +.+.|.+.|.+--|
T Consensus        72 ~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~  124 (163)
T PF03446_consen   72 EAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGP  124 (163)
T ss_dssp             HHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHH
T ss_pred             hhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeeccc
Confidence            12222211 2346899999999998887       222 67889888876544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07326 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.024  Score=54.63  Aligned_cols=45  Identities=22%  Similarity=0.240  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+++|++|  .||+++|+.|.++|.+|.+  |+.++.+++.+++..
T Consensus         6 ~~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~   52 (237)
T PRK07326          6 GKVALITGGSK--GIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN   52 (237)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc
Confidence            36799999998  9999999999999999988  888888877776543

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.024  Score=55.73  Aligned_cols=43  Identities=16%  Similarity=0.299  Sum_probs=38.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus         2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   46 (260)
T PRK08267          2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYDINEAGLAALAAELG   46 (260)
T ss_pred             cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence            5799999998  9999999999999999998  88999988877765

>PRK06823 ornithine cyclodeaminase; Validated

Probab=95.68  E-value=0.11  Score=54.48  Aligned_cols=138  Identities=17%  Similarity=0.085  Sum_probs=88.8

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-Ccceeee-cCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  368 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv-~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig  368 (529)
                      .|+|+++.--=|....+-.-.++.+.-+|. +.-+.+. ||+.+|+       |+..+-+ +++.+++.++|+-   ..|
T Consensus        64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G---~qA  140 (315)
T PRK06823         64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG---IQA  140 (315)
T ss_pred             EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---HHH
Confidence            677777643323322232223355555655 3346675 9999985       3334444 6788999999987   899


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cCc-CChhhhhcCCCCc
Q 009674          369 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GDD-LTGKEQARAPKGT  437 (529)
Q Consensus       369 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~~-~~~~~q~~a~~G~  437 (529)
                      +.-++++|  +.-.+|.+  |++++.+++++++.+. +....-+.+.++  ++++|++.    .+. ++.+   |.++|+
T Consensus       141 ~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~---~l~~G~  216 (315)
T PRK06823        141 RMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL-GFAVNTTLDAAEVAHAANLIVTTTPSREPLLQAE---DIQPGT  216 (315)
T ss_pred             HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc-CCcEEEECCHHHHhcCCCEEEEecCCCCceeCHH---HcCCCc
Confidence            99999999  66667777  9999999988776432 233112336664  78888772    222 3344   448999


Q ss_pred             eeeccc
Q 009674          438 IFIPYT  443 (529)
Q Consensus       438 ~f~~~~  443 (529)
                      ++..+.
T Consensus       217 hi~~iG  222 (315)
T PRK06823        217 HITAVG  222 (315)
T ss_pred             EEEecC
Confidence            998886

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.65  E-value=0.021  Score=55.45  Aligned_cols=42  Identities=19%  Similarity=0.241  Sum_probs=36.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  .||+++|+.|+++|.+|.+  |+.++.+++.+++
T Consensus         2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~   45 (255)
T TIGR01963         2 KTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA   45 (255)
T ss_pred             CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            4699999998  9999999999999999988  8888887777664

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.65  E-value=0.058  Score=57.63  Aligned_cols=92  Identities=14%  Similarity=0.169  Sum_probs=66.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-----cC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----GD  423 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----g~  423 (529)
                      .++|+|+|+ |  .+|+.+|+.|.+.|.+|.+  ++.++.+.++++.+........+..++++  +.+|++|-     |+
T Consensus       167 ~~~VlViGa-G--~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       167 PGDVTIIGG-G--VVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CceEEEEcC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence            345999999 6  9999999999999999888  78888888877654321101001113332  56677663     32


Q ss_pred             ----cCChhhhhcCCCCceeecccccCcc
Q 009674          424 ----DLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       424 ----~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                          .++.+..+++++|.+++|++ +++-
T Consensus       244 ~~p~lit~~~l~~mk~g~vIvDva-~d~G  271 (370)
T TIGR00518       244 KAPKLVSNSLVAQMKPGAVIVDVA-IDQG  271 (370)
T ss_pred             CCCcCcCHHHHhcCCCCCEEEEEe-cCCC
Confidence                26889999999999999999 7776

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.63  E-value=0.027  Score=55.28  Aligned_cols=44  Identities=25%  Similarity=0.258  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         6 ~~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~   51 (257)
T PRK07067          6 GKVALLTGAAS--GIGEAVAERYLAEGARVVIADIKPARARLAALEIG   51 (257)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence            45799999998  9999999999999999988  88888888877754

>PRK08643 acetoin reductase; Validated

Probab=95.60  E-value=0.025  Score=55.39  Aligned_cols=43  Identities=21%  Similarity=0.264  Sum_probs=37.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++.
T Consensus         3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   47 (256)
T PRK08643          3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS   47 (256)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            5789999998  9999999999999999988  88888888877754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.59  E-value=0.03  Score=55.24  Aligned_cols=44  Identities=18%  Similarity=0.279  Sum_probs=39.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |++++.+++.++++
T Consensus         6 ~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (263)
T PRK06200          6 GQVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQRFG   51 (263)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            35799999997  9999999999999999988  88899998887764

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.59  E-value=0.015  Score=60.39  Aligned_cols=45  Identities=16%  Similarity=0.248  Sum_probs=40.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+++||+|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        53 g~~~lITGAs~--GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~   99 (320)
T PLN02780         53 GSWALVTGPTD--GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS   99 (320)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
Confidence            36789999997  9999999999999999998  999999998887643

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.023  Score=55.50  Aligned_cols=44  Identities=14%  Similarity=0.209  Sum_probs=38.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         5 ~k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (258)
T PRK07890          5 GKVVVVSGVGP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEID   50 (258)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            36799999998  9999999999999999998  88888888877654

>PRK06194 hypothetical protein; Provisional

Probab=95.57  E-value=0.025  Score=56.54  Aligned_cols=43  Identities=14%  Similarity=0.251  Sum_probs=37.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus         7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (287)
T PRK06194          7 KVAVITGAAS--GFGLAFARIGAALGMKLVLADVQQDALDRAVAELR   51 (287)
T ss_pred             CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  77777777766643

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.024  Score=59.03  Aligned_cols=45  Identities=24%  Similarity=0.313  Sum_probs=39.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus         7 ~~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~   53 (334)
T PRK07109          7 GRQVVVITGASA--GVGRATARAFARRGAKVVLLARGEEGLEALAAEIR   53 (334)
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            346899999998  9999999999999999988  88899888877753

>PRK07589 ornithine cyclodeaminase; Validated

Probab=95.55  E-value=0.093  Score=55.77  Aligned_cols=139  Identities=14%  Similarity=0.005  Sum_probs=91.7

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 009674          298 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  368 (529)
Q Consensus       298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig  368 (529)
                      -.|+|+++.=-=|....+-.--+..+.-+++ +.-+-+.||+.+|+       |+..+-+ +++.+++.++|+-   ..|
T Consensus        65 ~~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGaG---~QA  141 (346)
T PRK07589         65 LYSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGNG---AQS  141 (346)
T ss_pred             ceEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HHH
Confidence            3678887643324333343333445555554 35589999999984       3344555 6788899999987   899


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC-------cCChhhhhcCCC
Q 009674          369 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-------DLTGKEQARAPK  435 (529)
Q Consensus       369 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-------~~~~~~q~~a~~  435 (529)
                      +.-++++|  +.-.+|.+  |++++.+++.+++... +.+..-+.+.++  ++++|++-=.       .++.   +|.++
T Consensus       142 ~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~---~~lkp  217 (346)
T PRK07589        142 EFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP-GLRIVACRSVAEAVEGADIITTVTADKTNATILTD---DMVEP  217 (346)
T ss_pred             HHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhcCCEEEEecCCCCCCceecH---HHcCC
Confidence            99999888  66666666  9999999998887542 223222346664  7888877311       1333   35599


Q ss_pred             Cceeeccc
Q 009674          436 GTIFIPYT  443 (529)
Q Consensus       436 G~~f~~~~  443 (529)
                      |+++..+-
T Consensus       218 G~hV~aIG  225 (346)
T PRK07589        218 GMHINAVG  225 (346)
T ss_pred             CcEEEecC
Confidence            99988764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.54  E-value=0.033  Score=53.95  Aligned_cols=44  Identities=14%  Similarity=0.273  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|++  |+.++.+.+.+++.
T Consensus         5 ~~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (251)
T PRK07231          5 GKVAIVTGASS--GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL   50 (251)
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            35899999998  9999999999999999988  88888887776654

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.036  Score=55.42  Aligned_cols=43  Identities=14%  Similarity=0.142  Sum_probs=37.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.+.+++..
T Consensus         4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~   48 (277)
T PRK06180          4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTVRSEAARADFEALH   48 (277)
T ss_pred             CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc
Confidence            35799999998  9999999999999999998  8888888877653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.44  E-value=0.034  Score=54.49  Aligned_cols=45  Identities=16%  Similarity=0.316  Sum_probs=38.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.++++|++|  .||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~   54 (254)
T PRK08085          8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIINDITAERAELAVAKLR   54 (254)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999999  88888887776654

>PRK05717 oxidoreductase; Validated

Probab=95.42  E-value=0.044  Score=53.85  Aligned_cols=45  Identities=16%  Similarity=0.195  Sum_probs=37.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         9 ~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~   55 (255)
T PRK05717          9 NGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG   55 (255)
T ss_pred             CCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC
Confidence            456899999998  9999999999999999988  77777777665543

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.41  E-value=0.023  Score=61.05  Aligned_cols=138  Identities=13%  Similarity=0.092  Sum_probs=75.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCccccccceeeecccc--c-CcceEEE--EcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL--VGD  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi--vg~  423 (529)
                      ...+|+++||||  -+|+.+.+.|.++ +.+++.  ++++.-+.+...-+.-.+..+..+.+++  + +++|+++  +|.
T Consensus        37 ~~~kVaIvGATG--~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~  114 (381)
T PLN02968         37 EKKRIFVLGASG--YTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH  114 (381)
T ss_pred             cccEEEEECCCC--hHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence            456999999999  9999999999955 888777  3322222222221111111111122333  1 5677766  455


Q ss_pred             cCChhhhhcCCCCceeecccccCcc-CCCCCceeecC--CccccCCCCccccccccccC---------cc-hhHH-HHHh
Q 009674          424 DLTGKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHST--PAMIIPPSLSNMHSCENWLG---------RR-VMSA-WRIA  489 (529)
Q Consensus       424 ~~~~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~~~--~a~~~P~~~~~~~~~e~~~p---------~r-~~~A-c~a~  489 (529)
                      ..+.+--..+.+|..+||.|-   . .+++|..|.+-  -....|+-.+.   +-+++|         ++ +.-+ |.+-
T Consensus       115 ~~s~~i~~~~~~g~~VIDlSs---~fRl~~~~~y~~~y~~p~~~pe~~~~---~~yglpE~~r~~i~~~~iIAnPgC~~t  188 (381)
T PLN02968        115 GTTQEIIKALPKDLKIVDLSA---DFRLRDIAEYEEWYGHPHRAPELQKE---AVYGLTELQREEIKSARLVANPGCYPT  188 (381)
T ss_pred             HHHHHHHHHHhCCCEEEEcCc---hhccCCcccchhccCCCCCCcccchh---hhcccchhCHHHhcCCCEEECCCCHHH
Confidence            444444444567988888872   2 34455665554  22233432221   124443         12 2222 9999


Q ss_pred             hHhhhhcC
Q 009674          490 GIIHALEG  497 (529)
Q Consensus       490 ~~v~alEg  497 (529)
                      +++++|--
T Consensus       189 ~~~laL~P  196 (381)
T PLN02968        189 GIQLPLVP  196 (381)
T ss_pred             HHHHHHHH
Confidence            99987743

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.038  Score=53.55  Aligned_cols=44  Identities=16%  Similarity=0.190  Sum_probs=38.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus         6 ~k~vlItGasg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~   51 (249)
T PRK06500          6 GKTALITGGTS--GIGLETARQFLAEGARVAITGRDPASLEAARAELG   51 (249)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence            35799999998  9999999999999999988  88888888877764

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.023  Score=55.51  Aligned_cols=41  Identities=17%  Similarity=0.313  Sum_probs=36.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++
T Consensus         2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATS--GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence            4689999998  9999999999999999988  888888888765

>PRK06139 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.028  Score=58.78  Aligned_cols=44  Identities=14%  Similarity=0.243  Sum_probs=39.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         7 ~k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~   52 (330)
T PRK06139          7 GAVVVITGASS--GIGQATAEAFARRGARLVLAARDEEALQAVAEECR   52 (330)
T ss_pred             CCEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46899999997  9999999999999999999  99999998887753

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.034  Score=54.31  Aligned_cols=41  Identities=20%  Similarity=0.260  Sum_probs=35.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +.|+|+|++|  -||+++++.|+++|.+|..  |+.++.+++++.
T Consensus         3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~   45 (257)
T PRK09291          3 KTILITGAGS--GFGREVALRLARKGHNVIAGVQIAPQVTALRAE   45 (257)
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            4799999998  9999999999999999988  777777766654

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.037  Score=56.42  Aligned_cols=43  Identities=23%  Similarity=0.346  Sum_probs=38.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++
T Consensus        40 ~k~vlItGasg--gIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l   84 (293)
T PRK05866         40 GKRILLTGASS--GIGEAAAEQFARRGATVVAVARREDLLDAVADRI   84 (293)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  8888888887765

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.36  E-value=0.053  Score=56.24  Aligned_cols=148  Identities=22%  Similarity=0.286  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns  339 (529)
                      .+-+.-+..-.+.|++.|++..-  |.       +++.++++|.|.   ++.++.= |++++.          +=|||=+
T Consensus        44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~  123 (286)
T PRK14175         44 GASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFH  123 (286)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence            34455566667788999987643  33       344447788873   3555522 322331          2234432


Q ss_pred             ----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          340 ----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       340 ----------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                                      -|++.|++-+.     -..++|+|+|+.+  -+|+.+|..|.++|..|++ .++.  .      
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~~s~t--~------  193 (286)
T PRK14175        124 PINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTILHSRS--K------  193 (286)
T ss_pred             ccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCc--h------
Confidence                            36666666554     3578999999996  7999999999999999999 2211  1      


Q ss_pred             ccccccceeeeccccc--CcceEEE--EcCc--CChhhhhcCCCCceeecccccCcc---CCCCCcee
Q 009674          398 PVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  456 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y  456 (529)
                                  ++++  ++++++|  +|+-  ++++..   ++|++++|+. +++.   ++--||-+
T Consensus       194 ------------~l~~~~~~ADIVIsAvg~p~~i~~~~v---k~gavVIDvG-i~~~~~gkl~GDvd~  245 (286)
T PRK14175        194 ------------DMASYLKDADVIVSAVGKPGLVTKDVV---KEGAVIIDVG-NTPDENGKLKGDVDY  245 (286)
T ss_pred             ------------hHHHHHhhCCEEEECCCCCcccCHHHc---CCCcEEEEcC-CCcCCCCCeecCccH
Confidence                        1221  3556655  4544  777654   8999999999 7763   34455553

>PRK06199 ornithine cyclodeaminase; Validated

Probab=95.34  E-value=0.11  Score=55.73  Aligned_cols=155  Identities=13%  Similarity=0.091  Sum_probs=100.9

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  369 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~  369 (529)
                      .|+|+++.=-=|....+..-.++.+.-+|+ +.-.-+.||+.+|+       |+..+-+ +++.+.+.++|+-   -.|+
T Consensus        92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~QA~  168 (379)
T PRK06199         92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VMGK  168 (379)
T ss_pred             eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HHHH
Confidence            678887753334333444445566666665 35589999999985       4455656 6788899999987   8999


Q ss_pred             HHHHHHh--cc-CcEEEe--cchhhHHHHHhhCccccccce-ee-eccccc--CcceEEEEcC-----------cCChhh
Q 009674          370 AVASSLC--QM-GIKVAT--ICKDDYEKLKLRIPVEAQHNL-VL-STSYAA--HKTKIWLVGD-----------DLTGKE  429 (529)
Q Consensus       370 ava~~L~--~~-~~~v~l--~~~~~~~~l~~~~~~~~~~~l-~~-~~~~~~--~~~~vwivg~-----------~~~~~~  429 (529)
                      .-++++|  +. -.+|.+  |++++.+++.+++........ +. +.+.++  ++++|++.-.           .++.+ 
T Consensus       169 ~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~~~-  247 (379)
T PRK06199        169 TILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVKRE-  247 (379)
T ss_pred             HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEecHH-
Confidence            9999998  33 346666  999999999888765432111 33 347764  8888877322           23344 


Q ss_pred             hhcCCCCceeecccc--cCccCCCCC-ceeecC
Q 009674          430 QARAPKGTIFIPYTQ--IPPRKLRKD-CFYHST  459 (529)
Q Consensus       430 q~~a~~G~~f~~~~~--~~~~~~R~d-c~y~~~  459 (529)
                        |.++|+|+.-...  +|+..++.| ..|-+.
T Consensus       248 --~lkpG~hv~~ig~~eld~~~l~~~a~vvvD~  278 (379)
T PRK06199        248 --WVKPGAFLLMPAACRIDEGMEQGDVRKVVDN  278 (379)
T ss_pred             --HcCCCcEEecCCcccCCHHHHhCCCcEEEcC
Confidence              4489999865432  555555553 444444

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.33  E-value=0.043  Score=54.27  Aligned_cols=43  Identities=19%  Similarity=0.281  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++.
T Consensus         5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~   49 (262)
T TIGR03325         5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH   49 (262)
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc
Confidence            46899999998  9999999999999999998  8888888887653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.33  E-value=0.036  Score=54.47  Aligned_cols=43  Identities=16%  Similarity=0.249  Sum_probs=37.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++.+.+++
T Consensus        12 ~k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i   56 (259)
T PRK08213         12 GKTALVTGGSR--GLGLQIAEALGEAGARVVLSARKAEELEEAAAHL   56 (259)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  8888887776654

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.039  Score=53.66  Aligned_cols=43  Identities=21%  Similarity=0.338  Sum_probs=36.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+++..+++++++
T Consensus         6 ~k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~   50 (250)
T PRK07774          6 DKVAIVTGAAG--GIGQAYAEALAREGASVVVADINAEGAERVAKQI   50 (250)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            36799999998  9999999999999999998  7777777776664

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.32  E-value=0.04  Score=53.98  Aligned_cols=42  Identities=21%  Similarity=0.313  Sum_probs=37.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .|+++|++|  -||+++|+.|+++|.+|.+  |++++.+.++++++
T Consensus         2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   45 (248)
T PRK10538          2 IVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG   45 (248)
T ss_pred             EEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence            589999998  9999999999999999998  88888888877654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.32  E-value=0.039  Score=54.09  Aligned_cols=46  Identities=15%  Similarity=0.149  Sum_probs=39.2

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ...+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         9 ~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   56 (256)
T PRK06124          9 LAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR   56 (256)
T ss_pred             CCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence            3457899999998  9999999999999999999  88888877766653

>TIGR02415 23BDH acetoin reductases

Probab=95.29  E-value=0.035  Score=54.10  Aligned_cols=43  Identities=19%  Similarity=0.304  Sum_probs=36.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ++++++|++|  -||+++++.|+++|.+|++  |+.++.+++.+++.
T Consensus         1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~   45 (254)
T TIGR02415         1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVADLNEETAKETAKEIN   45 (254)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            4689999998  9999999999999999988  77777777766543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.28  E-value=0.035  Score=54.46  Aligned_cols=38  Identities=24%  Similarity=0.269  Sum_probs=35.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      .|+|+||||  .||+++|+.|.++|.+|..  |+.++...+.
T Consensus         2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~   41 (275)
T COG0702           2 KILVTGATG--FVGGAVVRELLARGHEVRAAVRNPEAAAALA   41 (275)
T ss_pred             eEEEEeccc--chHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence            689999999  9999999999999999999  9999999887

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.23  E-value=0.082  Score=58.38  Aligned_cols=141  Identities=18%  Similarity=0.184  Sum_probs=92.4

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec-
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-  422 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-  422 (529)
                      .-..++|.|+|.-   .||+++|+.|...|.+|+.  ++..+.  ++... .+.     +..++++  +.+|++|  .| 
T Consensus       251 ~LaGKtVgVIG~G---~IGr~vA~rL~a~Ga~ViV~e~dp~~a--~~A~~-~G~-----~~~~leell~~ADIVI~atGt  319 (476)
T PTZ00075        251 MIAGKTVVVCGYG---DVGKGCAQALRGFGARVVVTEIDPICA--LQAAM-EGY-----QVVTLEDVVETADIFVTATGN  319 (476)
T ss_pred             CcCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhH--HHHHh-cCc-----eeccHHHHHhcCCEEEECCCc
Confidence            3457799999966   8999999999999999988  343332  22111 111     2234543  5667765  33 


Q ss_pred             -CcCChhhhhcCCCCceeecccccCcc----CCC--CC--ceee--cCCccccCC----------CCccccccccccCcc
Q 009674          423 -DDLTGKEQARAPKGTIFIPYTQIPPR----KLR--KD--CFYH--STPAMIIPP----------SLSNMHSCENWLGRR  481 (529)
Q Consensus       423 -~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R--~d--c~y~--~~~a~~~P~----------~~~~~~~~e~~~p~r  481 (529)
                       ..|+.+....|++|++++.+++++.+    .++  .|  ..-.  ......+|.          .+-|+. |-.+.|..
T Consensus       320 ~~iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~-~~~GhP~~  398 (476)
T PTZ00075        320 KDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLG-CATGHPSF  398 (476)
T ss_pred             ccccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccC-CCCCCCee
Confidence             46888999999999999999997633    122  11  1111  111122442          356677 88899999


Q ss_pred             hhHHHHHhhHhhhhcCCCCCc
Q 009674          482 VMSAWRIAGIIHALEGWDLNE  502 (529)
Q Consensus       482 ~~~Ac~a~~~v~alEgw~~~e  502 (529)
                      +|+-.++--.+-.+|=|..++
T Consensus       399 vMd~sfa~Q~la~~~l~~~~~  419 (476)
T PTZ00075        399 VMSNSFTNQVLAQIELWENRD  419 (476)
T ss_pred             EeeHHHHHHHHHHHHHHhccC
Confidence            999988877776666665544

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.21  E-value=0.083  Score=54.62  Aligned_cols=126  Identities=13%  Similarity=0.127  Sum_probs=76.3

Q ss_pred             chhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHh-----cCcCCC
Q 009674          279 PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN-----SLPKTT  353 (529)
Q Consensus       279 ~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~-----~i~~~~  353 (529)
                      |.-.....+.+.+++..|..       .|++|.   +| +|.++..+.   +-..=      |...+++     +++-..
T Consensus       100 Plp~~i~~~~~ld~I~~aKD-------Vdg~n~---~n-~G~l~~~~~---~~~p~------T~~gii~~L~~~~i~l~G  159 (283)
T PRK14192        100 PVPAQIDERACFDAISLAKD-------VDGVTC---LG-FGRMAMGEA---AYGSA------TPAGIMRLLKAYNIELAG  159 (283)
T ss_pred             CCccccCHHHHHhccCHHHh-------cCCCCc---cc-cCccccCCC---cccCC------cHHHHHHHHHHcCCCCCC
Confidence            33334444557777754444       356777   55 555554332   22222      3344444     344567


Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeecccccCcceEEEEc----CcCChhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVG----DDLTGKE  429 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg----~~~~~~~  429 (529)
                      ++|+++|+.|  -+|+++|..|.++|..|++-+. +-++|++.+                ++++++|..    +.++++.
T Consensus       160 k~vvViG~gg--~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~----------------~~aDIvI~AtG~~~~v~~~~  220 (283)
T PRK14192        160 KHAVVVGRSA--ILGKPMAMMLLNANATVTICHS-RTQNLPELV----------------KQADIIVGAVGKPELIKKDW  220 (283)
T ss_pred             CEEEEECCcH--HHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh----------------ccCCEEEEccCCCCcCCHHH
Confidence            7999999997  8999999999999999998111 223333332                245565522    2455554


Q ss_pred             hhcCCCCceeecccccCc
Q 009674          430 QARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       430 q~~a~~G~~f~~~~~~~~  447 (529)
                         .++|++++|+. +.|
T Consensus       221 ---lk~gavViDvg-~n~  234 (283)
T PRK14192        221 ---IKQGAVVVDAG-FHP  234 (283)
T ss_pred             ---cCCCCEEEEEE-Eee
Confidence               49999999998 555

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.20  E-value=0.04  Score=53.24  Aligned_cols=43  Identities=26%  Similarity=0.371  Sum_probs=36.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         7 ~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~   51 (251)
T PRK12826          7 RVALVTGAAR--GIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE   51 (251)
T ss_pred             CEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  88777776666543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.19  E-value=0.037  Score=54.73  Aligned_cols=44  Identities=14%  Similarity=0.290  Sum_probs=36.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+   +++++.+++.+++.
T Consensus         8 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   54 (260)
T PRK08416          8 GKTLVISGGTR--GIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLE   54 (260)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            46899999997  9999999999999999987   46677777665543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.19  E-value=0.045  Score=54.23  Aligned_cols=49  Identities=14%  Similarity=0.135  Sum_probs=40.8

Q ss_pred             cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          348 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       348 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+...+.++++|++|  -||+++|+.|+++|.+|.+  |+.++++++++++.
T Consensus         5 ~~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~   55 (265)
T PRK07097          5 LFSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR   55 (265)
T ss_pred             ccCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence            3344567899999998  9999999999999999988  78888877766653

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.16  E-value=0.073  Score=49.57  Aligned_cols=74  Identities=15%  Similarity=0.144  Sum_probs=52.8

Q ss_pred             cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec
Q 009674          348 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG  422 (529)
Q Consensus       348 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg  422 (529)
                      +++-..++|.++|.+.  .+|+.+|..|.++|..|++ .++.                    .++++  +.+||+|  +|
T Consensus        23 ~~~~~gk~v~VvGrs~--~vG~pla~lL~~~gatV~~~~~~t--------------------~~l~~~v~~ADIVvsAtg   80 (140)
T cd05212          23 GVRLDGKKVLVVGRSG--IVGAPLQCLLQRDGATVYSCDWKT--------------------IQLQSKVHDADVVVVGSP   80 (140)
T ss_pred             CCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeCCCC--------------------cCHHHHHhhCCEEEEecC
Confidence            4455788999999998  9999999999999999999 2110                    02232  4566655  33


Q ss_pred             --CcCChhhhhcCCCCceeecccccCc
Q 009674          423 --DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       423 --~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                        ..++++.+   ++|++++|+. .+.
T Consensus        81 ~~~~i~~~~i---kpGa~Vidvg-~~~  103 (140)
T cd05212          81 KPEKVPTEWI---KPGATVINCS-PTK  103 (140)
T ss_pred             CCCccCHHHc---CCCCEEEEcC-CCc
Confidence              33555554   9999999987 443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.041  Score=53.60  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=36.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ++|+++|++|  -||+++|+.|+++|.+|++  |++++.+.+.+++
T Consensus         2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~   45 (243)
T PRK07102          2 KKILIIGATS--DIARACARRYAAAGARLYLAARDVERLERLADDL   45 (243)
T ss_pred             cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence            4799999998  9999999999999999988  8888777665553

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.14  E-value=0.043  Score=52.61  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=36.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  .||+.+|+.|.++|.+|.+  |++++.+.+.+++
T Consensus         6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~   49 (246)
T PRK05653          6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDSNEEAAEALAAEL   49 (246)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Confidence            5799999998  9999999999999999888  8888777665553

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.051  Score=52.86  Aligned_cols=44  Identities=20%  Similarity=0.330  Sum_probs=38.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++++++..
T Consensus         3 k~vlItGas~--giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   48 (248)
T PRK08251          3 QKILITGASS--GLGAGMAREFAAKGRDLALCARRTDRLEELKAELLA   48 (248)
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence            5799999998  9999999999999999988  888888888766443

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.031  Score=55.45  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  .||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         5 ~~~ilVtGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   50 (273)
T PRK07825          5 GKVVAITGGAR--GIGLATARALAALGARVAIGDLDEALAKETAAELG   50 (273)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence            35799999998  9999999999999999988  88888888877654

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.027  Score=55.36  Aligned_cols=45  Identities=20%  Similarity=0.226  Sum_probs=39.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         7 ~k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~   53 (260)
T PRK07063          7 GKVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAAIAR   53 (260)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999988  888888888877643

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.08  E-value=0.059  Score=56.03  Aligned_cols=48  Identities=15%  Similarity=0.078  Sum_probs=37.7

Q ss_pred             hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          347 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       347 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ++......+|+|+|++|  -||+.+++.|.++|.+|..  |+.++.+.+.++
T Consensus         4 ~~~~~~~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~   53 (353)
T PLN02896          4 EGRESATGTYCVTGATG--YIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK   53 (353)
T ss_pred             cccccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh
Confidence            34444567899999999  9999999999999999987  666655555444

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.047  Score=53.52  Aligned_cols=43  Identities=26%  Similarity=0.392  Sum_probs=37.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++.
T Consensus         2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   46 (252)
T PRK07677          2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE   46 (252)
T ss_pred             CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            5789999998  9999999999999999988  88888888777654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=95.03  E-value=0.049  Score=52.98  Aligned_cols=42  Identities=19%  Similarity=0.133  Sum_probs=35.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++.+++
T Consensus         3 k~ilItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   47 (248)
T PRK06947          3 KVVLITGASR--GIGRATAVLAAARGWSVGINYARDAAAAEETADAV   47 (248)
T ss_pred             cEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            5799999998  9999999999999999876   5667776665554

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.03  E-value=0.056  Score=53.35  Aligned_cols=43  Identities=26%  Similarity=0.394  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++++++
T Consensus         5 ~~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (263)
T PRK09072          5 DKRVLLTGASG--GIGQALAEALAAAGARLLLVGRNAEKLEALAARL   49 (263)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  8888888888776

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.02  E-value=0.04  Score=54.33  Aligned_cols=44  Identities=18%  Similarity=0.363  Sum_probs=39.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.++++++++.
T Consensus         3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~   48 (257)
T PRK07024          3 LKVFITGASS--GIGQALAREYARQGATLGLVARRTDALQAFAARLPK   48 (257)
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc
Confidence            5799999998  9999999999999999998  888888888877643

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.02  E-value=0.03  Score=57.59  Aligned_cols=44  Identities=16%  Similarity=0.150  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  |+.++.++..+++.
T Consensus        14 gk~~lITGas~--GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~   59 (313)
T PRK05854         14 GKRAVVTGASD--GLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIR   59 (313)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999997  9999999999999999998  88888887776653

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=95.00  E-value=0.13  Score=54.54  Aligned_cols=158  Identities=16%  Similarity=0.128  Sum_probs=104.9

Q ss_pred             HHcCCcEEEecccccc-cccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchh
Q 009674          297 DAKGVKVISLGLLNQG-EELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANK  366 (529)
Q Consensus       297 ~k~G~kv~~LG~ln~~-e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~k  366 (529)
                      +-.|+|+++ |-.... ..|..-.++.+--.|+ +..+-+.||+.+|+       |++.+-+ +++.+.+.++|+-   .
T Consensus        65 ~~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGaG---~  140 (330)
T COG2423          65 DVAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGAG---A  140 (330)
T ss_pred             CeEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---H
Confidence            345777776 222221 3444444555555555 45599999999985       3445544 6689999999997   9


Q ss_pred             hHHHHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE-----EcCcCChhhhhcCCC
Q 009674          367 VANAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL-----VGDDLTGKEQARAPK  435 (529)
Q Consensus       367 ig~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi-----vg~~~~~~~q~~a~~  435 (529)
                      .++.-+++++  +.-.++.+  |+++.-+++.+.+..........+.+.++  ..++|++     -.-.++.+.+   +|
T Consensus       141 qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l---~~  217 (330)
T COG2423         141 QARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWL---KP  217 (330)
T ss_pred             HHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhc---CC
Confidence            9999999999  55555666  99999998887766655444234556664  6777777     2234455544   79


Q ss_pred             Cceeecccc-------cCcc-CCCCCceeecCCc
Q 009674          436 GTIFIPYTQ-------IPPR-KLRKDCFYHSTPA  461 (529)
Q Consensus       436 G~~f~~~~~-------~~~~-~~R~dc~y~~~~a  461 (529)
                      |+|+.-+..       ++++ -.|-||.+-+.+.
T Consensus       218 G~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~  251 (330)
T COG2423         218 GTHINAIGADAPGKRELDPEVLARADRVVVDSLE  251 (330)
T ss_pred             CcEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence            999998874       5555 3445576665554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.98  E-value=0.058  Score=51.79  Aligned_cols=43  Identities=23%  Similarity=0.291  Sum_probs=33.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~  397 (529)
                      .+.|+++|++|  .||+++|+.|+++|.+|.+  |+. ++.+++.+++
T Consensus         5 ~~~vlItG~sg--~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~   50 (248)
T PRK05557          5 GKVALVTGASR--GIGRAIAERLAAQGANVVINYASSEAGAEALVAEI   50 (248)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence            46899999998  9999999999999999966  433 3455554443

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.97  E-value=0.047  Score=49.72  Aligned_cols=43  Identities=19%  Similarity=0.261  Sum_probs=35.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cc--hhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--IC--KDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~--~~~~~~l~~~~~  398 (529)
                      +.|+++|+++  -||+++|+.|+++ +.+|.+  |+  .++.+++.++++
T Consensus         1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~   48 (167)
T PF00106_consen    1 KTVLITGASS--GIGRALARALARRGARVVILTSRSEDSEGAQELIQELK   48 (167)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCC--HHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence            5789999997  9999999999988 556566  77  678888877755

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.96  E-value=0.046  Score=53.25  Aligned_cols=39  Identities=21%  Similarity=0.299  Sum_probs=32.5

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhh
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLR  396 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~--~~~~~l~~~  396 (529)
                      |+|+||||  ++|+.++++|.+.+.+|..  |+.  ++.++|++.
T Consensus         1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~   43 (233)
T PF05368_consen    1 ILVTGATG--NQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL   43 (233)
T ss_dssp             EEEETTTS--HHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT
T ss_pred             CEEECCcc--HHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc
Confidence            78999999  9999999999999998888  653  456666654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.96  E-value=0.03  Score=58.65  Aligned_cols=53  Identities=19%  Similarity=0.203  Sum_probs=44.7

Q ss_pred             HHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          345 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       345 v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.+.++-....++|+|+|+  -||+++|+.|+++|.+|.|  ||.++-++.++++..
T Consensus        27 ~~~~~~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~   81 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQK   81 (314)
T ss_pred             eeccccCCCcEEEEECCCC--chHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            3344444557899999996  9999999999999999999  999999988888665

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.059  Score=52.80  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=37.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~   47 (257)
T PRK07074          3 RTALVTGAAG--GIGQALARRFLAAGDRVLALDIDAAALAAFADALG   47 (257)
T ss_pred             CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            5799999998  9999999999999999988  88888888877663

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.052  Score=54.65  Aligned_cols=44  Identities=11%  Similarity=0.203  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~   51 (275)
T PRK05876          6 GRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR   51 (275)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  88888887766653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.95  E-value=0.057  Score=55.41  Aligned_cols=44  Identities=18%  Similarity=0.183  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~   51 (322)
T PRK07453          6 KGTVIITGASS--GVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG   51 (322)
T ss_pred             CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence            46799999998  9999999999999999988  88888888877763

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.94  E-value=0.047  Score=55.75  Aligned_cols=38  Identities=21%  Similarity=0.136  Sum_probs=32.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  393 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l  393 (529)
                      +.|+|+|+||  -||+++++.|.++|.+|..  |+.++.+++
T Consensus         6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   45 (322)
T PLN02986          6 KLVCVTGASG--YIASWIVKLLLLRGYTVKATVRDLTDRKKT   45 (322)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence            6899999999  9999999999999999975  766554443

>PRK12746 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.056  Score=52.77  Aligned_cols=42  Identities=24%  Similarity=0.237  Sum_probs=35.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  -||+++|+.|.++|.+|.+   |++++.+++.+++
T Consensus         7 ~~ilItGasg--~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~   51 (254)
T PRK12746          7 KVALVTGASR--GIGRAIAMRLANDGALVAIHYGRNKQAADETIREI   51 (254)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            6899999998  9999999999999999865   7777776665554

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.064  Score=52.08  Aligned_cols=44  Identities=16%  Similarity=0.231  Sum_probs=37.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.++++|++|  .||+++|+.|.++|.+|.+  |+.++.+.+++++.
T Consensus         5 ~k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   50 (252)
T PRK06138          5 GRVAIVTGAGS--GIGRATAKLFAREGARVVVADRDAEAAERVAAAIA   50 (252)
T ss_pred             CcEEEEeCCCc--hHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh
Confidence            46899999998  9999999999999999988  88887777766653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.91  E-value=0.054  Score=53.16  Aligned_cols=43  Identities=16%  Similarity=0.231  Sum_probs=36.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~   47 (259)
T PRK12384          3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVADINSEKAANVAQEIN   47 (259)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  77777777766543

>PRK12939 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.063  Score=51.95  Aligned_cols=43  Identities=21%  Similarity=0.265  Sum_probs=37.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+.+.+++
T Consensus         7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (250)
T PRK12939          7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFNDGLAAEARELAAAL   51 (250)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999888  7888777776654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.90  E-value=0.057  Score=52.79  Aligned_cols=43  Identities=19%  Similarity=0.317  Sum_probs=37.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |++++.+++.+++
T Consensus         7 ~~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (262)
T PRK13394          7 GKTAVVTGAAS--GIGKEIALELARAGAAVAIADLNQDGANAVADEI   51 (262)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence            46899999998  9999999999999999988  8887777776664

>PRK06172 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.054  Score=52.98  Aligned_cols=43  Identities=21%  Similarity=0.170  Sum_probs=37.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus         7 ~k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (253)
T PRK06172          7 GKVALVTGGAA--GIGRATALAFAREGAKVVVADRDAAGGEETVALI   51 (253)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  8888877776654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.87  E-value=0.063  Score=52.85  Aligned_cols=44  Identities=14%  Similarity=0.220  Sum_probs=35.9

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ...+.|+++|++|  -||+++|+.|+++|.+|.+  |+ ++.+++++++
T Consensus        13 l~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~   58 (258)
T PRK06935         13 LDGKVAIVTGGNT--GLGQGYAVALAKAGADIIITTHG-TNWDETRRLI   58 (258)
T ss_pred             CCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence            3457899999998  9999999999999999988  55 5556665553

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.87  E-value=0.055  Score=53.89  Aligned_cols=44  Identities=23%  Similarity=0.256  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        10 ~k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   55 (278)
T PRK08277         10 GKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK   55 (278)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888777753

>PRK05993 short chain dehydrogenase; Provisional

Probab=94.84  E-value=0.041  Score=55.11  Aligned_cols=41  Identities=20%  Similarity=0.271  Sum_probs=36.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++.++++
T Consensus         5 k~vlItGasg--giG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~   47 (277)
T PRK05993          5 RSILITGCSS--GIGAYCARALQSDGWRVFATCRKEEDVAALEAE   47 (277)
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence            5799999998  9999999999999999998  888888888764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.84  E-value=0.038  Score=54.56  Aligned_cols=42  Identities=21%  Similarity=0.286  Sum_probs=37.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   45 (259)
T PRK08340          2 NVLVTASSR--GIGFNVARELLKKGARVVISSRNEENLEKALKELK   45 (259)
T ss_pred             eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            689999998  9999999999999999998  88888888877764

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=94.82  E-value=0.083  Score=58.88  Aligned_cols=181  Identities=15%  Similarity=0.154  Sum_probs=106.3

Q ss_pred             HHHcCCcEEEecccc------------cccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccC
Q 009674          296 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT  363 (529)
Q Consensus       296 A~k~G~kv~~LG~ln------------~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~~~~~V~~~Gatg  363 (529)
                      ..++|+.++++=...            ++-++.|+......-|  .|.-++ +|.+-++.    .+|  .++|+|.|+- 
T Consensus       104 l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~--~lgr~~-~g~~taag----~vp--~akVlViGaG-  173 (511)
T TIGR00561       104 LAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAH--EFGRFF-TGQITAAG----KVP--PAKVLVIGAG-  173 (511)
T ss_pred             HHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHH--Hhhhhc-CCceecCC----CCC--CCEEEEECCC-
Confidence            356778888876444            3345555554444433  033333 45544432    344  4899999984 


Q ss_pred             chhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc------------ccceeeec-c--------ccc--CcceE
Q 009674          364 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA------------QHNLVLST-S--------YAA--HKTKI  418 (529)
Q Consensus       364 ~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~------------~~~l~~~~-~--------~~~--~~~~v  418 (529)
                        -+|.+.+..+...|.+|..  ++.++++..++ ++.+.            ..+-...+ +        +.+  +++||
T Consensus       174 --~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DI  250 (511)
T TIGR00561       174 --VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDI  250 (511)
T ss_pred             --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCE
Confidence              8999999999999998887  77778776664 33322            01100111 1        222  45677


Q ss_pred             EE--E---cC----cCChhhhhcCCCCceeecccccCcc----CCCCCceeecCCccccCCCCccccccccccCcc---h
Q 009674          419 WL--V---GD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR---V  482 (529)
Q Consensus       419 wi--v---g~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r---~  482 (529)
                      +|  +   |+    .++.++++.|++|.+++|++ .++-    -.|.+.+|.+.      +.+.  +.|--.+|.+   +
T Consensus       251 VI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA-~d~GGn~E~t~p~~~~~~~------~GV~--~~gv~nlPs~~p~~  321 (511)
T TIGR00561       251 IITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA-AEQGGNCEYTKPGEVYTTE------NQVK--VIGYTDLPSRLPTQ  321 (511)
T ss_pred             EEECcccCCCCCCeeehHHHHhhCCCCCEEEEee-eCCCCCEEEecCceEEEec------CCEE--EEeeCCccccCHHH
Confidence            66  2   43    38999999999999999999 6654    22333333221      1122  3355666665   3


Q ss_pred             hHHHHHhhHhhhhcCC
Q 009674          483 MSAWRIAGIIHALEGW  498 (529)
Q Consensus       483 ~~Ac~a~~~v~alEgw  498 (529)
                      .+--.+..++.-||.-
T Consensus       322 AS~l~s~nl~~~l~~l  337 (511)
T TIGR00561       322 SSQLYGTNLVNLLKLL  337 (511)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3445566666555553

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05872 short chain dehydrogenase; Provisional

Probab=94.82  E-value=0.05  Score=55.29  Aligned_cols=46  Identities=17%  Similarity=0.244  Sum_probs=41.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.++++.
T Consensus         8 ~gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~   55 (296)
T PRK05872          8 AGKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAELGG   55 (296)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC
Confidence            356899999998  9999999999999999988  899999999888754

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=94.80  E-value=0.099  Score=53.69  Aligned_cols=127  Identities=13%  Similarity=0.053  Sum_probs=77.2

Q ss_pred             ecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeee-
Q 009674          335 VDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLS-  408 (529)
Q Consensus       335 v~Gnsltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~-  408 (529)
                      |||.-...+.--..+  +...++|+|+||-   -.|+|++.+|.+.|+ ++++  |+.+|.++|.+++........+.. 
T Consensus       105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~  181 (282)
T TIGR01809       105 TDWDGIAGALANIGKFEPLAGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGD  181 (282)
T ss_pred             CCHHHHHHHHHhhCCccccCCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccch
Confidence            666666666543332  2245689999996   579999999999997 5777  999999999887643211000011 


Q ss_pred             ccccc--CcceEEE----EcCcCChhhhhc---------CCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674          409 TSYAA--HKTKIWL----VGDDLTGKEQAR---------APKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       409 ~~~~~--~~~~vwi----vg~~~~~~~q~~---------a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  464 (529)
                      .++++  .+++++|    +|..++++++..         .+++..+.|..=-|.+     ..| +-|....+..|-+
T Consensus       182 ~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv  258 (282)
T TIGR01809       182 SGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPTPLVAIVSAAGWRVISGLQMLL  258 (282)
T ss_pred             hhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCCHHHHHHHHCCCEEECcHHHHH
Confidence            12222  4567777    676666655421         2456677777732222     112 4466666666654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.042  Score=53.50  Aligned_cols=41  Identities=27%  Similarity=0.348  Sum_probs=37.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus         2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~   44 (223)
T PRK05884          2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL   44 (223)
T ss_pred             eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence            589999998  9999999999999999988  8888888887765

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=94.80  E-value=0.044  Score=56.64  Aligned_cols=29  Identities=21%  Similarity=0.229  Sum_probs=27.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+|+||+|  =||+++++.|.++|.+|..
T Consensus         1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~   29 (343)
T TIGR01472         1 KIALITGITG--QDGSYLAEFLLEKGYEVHG   29 (343)
T ss_pred             CeEEEEcCCC--cHHHHHHHHHHHCCCEEEE
Confidence            4799999999  9999999999999999987

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK08589 short chain dehydrogenase; Validated

Probab=94.79  E-value=0.055  Score=54.06  Aligned_cols=43  Identities=23%  Similarity=0.278  Sum_probs=36.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+  |+ ++.+++.+++.
T Consensus         6 ~k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~   50 (272)
T PRK08589          6 NKVAVITGAST--GIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIK   50 (272)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHH
Confidence            45799999998  9999999999999999998  76 77777766653

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.78  E-value=0.058  Score=53.15  Aligned_cols=45  Identities=20%  Similarity=0.265  Sum_probs=39.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         7 ~k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   53 (259)
T PRK06125          7 GKRVLITGASK--GIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA   53 (259)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence            47899999998  9999999999999999988  888888887776543

>PRK07831 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.06  Score=53.13  Aligned_cols=45  Identities=16%  Similarity=0.178  Sum_probs=37.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.++++|++| +-||+++|+.|+++|.+|.+  |+.+++++..+++.
T Consensus        17 ~k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~   63 (262)
T PRK07831         17 GKVVLVTAAAG-TGIGSATARRALEEGARVVISDIHERRLGETADELA   63 (262)
T ss_pred             CCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999996 35999999999999999998  77777777666543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=94.77  E-value=0.039  Score=57.35  Aligned_cols=78  Identities=14%  Similarity=0.193  Sum_probs=48.1

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeecccccCcce-EEEEcCcCChhhhh
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IWLVGDDLTGKEQA  431 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-vwivg~~~~~~~q~  431 (529)
                      |+++||+|  +||+.+|+.|++.+.+ +.+  +++..+-.+++++.......     ++   ... +-++||.-+.+...
T Consensus         1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~-----~v---~~~~~~vigDvrd~~~l~   70 (293)
T PF02719_consen    1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDP-----KV---RFEIVPVIGDVRDKERLN   70 (293)
T ss_dssp             EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--T-----TC---EEEEE--CTSCCHHHHHH
T ss_pred             CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccccc-----Cc---ccccCceeecccCHHHHH
Confidence            78999999  9999999999988864 555  88889999999975433221     00   111 24567777776654


Q ss_pred             cC----CCCceeeccc
Q 009674          432 RA----PKGTIFIPYT  443 (529)
Q Consensus       432 ~a----~~G~~f~~~~  443 (529)
                      .+    .+-.+||--+
T Consensus        71 ~~~~~~~pdiVfHaAA   86 (293)
T PF02719_consen   71 RIFEEYKPDIVFHAAA   86 (293)
T ss_dssp             HHTT--T-SEEEE---
T ss_pred             HHHhhcCCCEEEEChh
Confidence            44    4555555444

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.75  E-value=0.064  Score=53.28  Aligned_cols=41  Identities=17%  Similarity=0.296  Sum_probs=36.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++.+++
T Consensus         2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l   44 (270)
T PRK05650          2 RVMITGAAS--GLGRAIALRWAREGWRLALADVNEEGGEETLKLL   44 (270)
T ss_pred             EEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            689999998  9999999999999999988  8888877766654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.74  E-value=0.068  Score=51.85  Aligned_cols=43  Identities=21%  Similarity=0.326  Sum_probs=37.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.++++|++|  -||+++|+.|.++|.+|.+  |++++.+++.+++
T Consensus         3 ~~~ilItGas~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~   47 (250)
T TIGR03206         3 DKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI   47 (250)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  7887777776654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08017 oxidoreductase; Provisional

Probab=94.73  E-value=0.046  Score=53.32  Aligned_cols=40  Identities=23%  Similarity=0.295  Sum_probs=35.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++++.+++
T Consensus         3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~   44 (256)
T PRK08017          3 KSVLITGCSS--GIGLEAALELKRRGYRVLAACRKPDDVARMNS   44 (256)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence            4799999998  9999999999999999988  88888776654

>PRK07814 short chain dehydrogenase; Provisional

Probab=94.71  E-value=0.072  Score=52.76  Aligned_cols=44  Identities=14%  Similarity=0.243  Sum_probs=38.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|.++|.+|.+  |+.++++++.+++
T Consensus         9 ~~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l   54 (263)
T PRK07814          9 DDQVAVVTGAGR--GLGAAIALAFAEAGADVLIAARTESQLDEVAEQI   54 (263)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  8888888777664

>PRK09135 pteridine reductase; Provisional

Probab=94.69  E-value=0.069  Score=51.55  Aligned_cols=43  Identities=21%  Similarity=0.363  Sum_probs=35.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+.+|+.|+++|.+|.+  | ++++.+.+++++
T Consensus         6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~   51 (249)
T PRK09135          6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL   51 (249)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  4 455566665543

>PRK07062 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.043  Score=54.13  Aligned_cols=46  Identities=15%  Similarity=0.161  Sum_probs=39.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.++++|++|  .||+++|+.|+++|.+|.+  |+.++++++.+++..
T Consensus         7 ~~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (265)
T PRK07062          7 EGRVAVVTGGSS--GIGLATVELLLEAGASVAICGRDEERLASAEARLRE   54 (265)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999988  888888887776543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.65  E-value=0.077  Score=51.41  Aligned_cols=43  Identities=19%  Similarity=0.339  Sum_probs=37.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++
T Consensus         7 ~~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~   51 (239)
T PRK07666          7 GKNALITGAGR--GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV   51 (239)
T ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            36799999998  9999999999999999988  8888877776664

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.60  E-value=0.049  Score=56.42  Aligned_cols=147  Identities=22%  Similarity=0.259  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh-
Q 009674          284 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS-  339 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns-  339 (529)
                      +-+.-+...++.|++.|++..  -|.       +++.+++||.|-   |+.++.= |++++          .+=|||=+ 
T Consensus        45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~  124 (284)
T PRK14179         45 ASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHP  124 (284)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCH
Confidence            444445666778888888764  344       233336777764   3444421 22233          12234433 


Q ss_pred             ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 009674          340 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP  398 (529)
Q Consensus       340 ---------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~  398 (529)
                                     -|++.|++=+     +-.-++|.++|..|  -+|+.+|..|.++|..|++ .++.+         
T Consensus       125 ~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~--ivG~Pla~lL~~~gatVtv~~s~t~---------  193 (284)
T PRK14179        125 MNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSN--IVGKPMAQLLLDKNATVTLTHSRTR---------  193 (284)
T ss_pred             hhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHHCCCEEEEECCCCC---------
Confidence                           3666666644     34678999999998  9999999999999999999 21111         


Q ss_pred             cccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCcee
Q 009674          399 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  456 (529)
Q Consensus       399 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y  456 (529)
                                 ++++  ++++|+|  +|  +.++++.   .++|+++||++ +.+.   ++.-|+-+
T Consensus       194 -----------~l~~~~~~ADIVI~avg~~~~v~~~~---ik~GavVIDvg-in~~~~gkl~GDVdf  245 (284)
T PRK14179        194 -----------NLAEVARKADILVVAIGRGHFVTKEF---VKEGAVVIDVG-MNRDENGKLIGDVDF  245 (284)
T ss_pred             -----------CHHHHHhhCCEEEEecCccccCCHHH---ccCCcEEEEec-ceecCCCCeecCccH
Confidence                       2332  4556655  33  3455543   69999999999 6662   44455553

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.60  E-value=0.09  Score=50.74  Aligned_cols=43  Identities=19%  Similarity=0.247  Sum_probs=36.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|..|.+  |+.++++++.+++
T Consensus         6 ~~~vlItGa~g--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~   50 (245)
T PRK12936          6 GRKALVTGASG--GIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL   50 (245)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            46899999998  9999999999999999887  7777887776654

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.59  E-value=0.08  Score=52.94  Aligned_cols=44  Identities=25%  Similarity=0.288  Sum_probs=37.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++
T Consensus         9 ~~~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~   54 (274)
T PRK07775          9 DRRPALVAGASS--GIGAATAIELAAAGFPVALGARRVEKCEELVDKI   54 (274)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999877  7777777666553

>PRK12829 short chain dehydrogenase; Provisional

Probab=94.59  E-value=0.053  Score=53.05  Aligned_cols=45  Identities=20%  Similarity=0.420  Sum_probs=38.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..++|+++|++|  .||+++|+.|+++|.+|.+  |++++.++++++.+
T Consensus        10 ~~~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~   56 (264)
T PRK12829         10 DGLRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP   56 (264)
T ss_pred             CCCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            346899999998  9999999999999999988  88888887776654

>PRK06484 short chain dehydrogenase; Validated

Probab=94.53  E-value=0.082  Score=57.73  Aligned_cols=46  Identities=17%  Similarity=0.184  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus       268 ~~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~  315 (520)
T PRK06484        268 SPRVVAITGGAR--GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGD  315 (520)
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            356899999998  9999999999999999998  888999988877643

>PRK05599 hypothetical protein; Provisional

Probab=94.53  E-value=0.062  Score=52.98  Aligned_cols=42  Identities=21%  Similarity=0.369  Sum_probs=36.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .|+++|+++  -||+++|+.|++ |.+|.+  |++++++++++++..
T Consensus         2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l~~   45 (246)
T PRK05599          2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASDLRQ   45 (246)
T ss_pred             eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHh
Confidence            589999997  999999999995 999999  999999988887643

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.50  E-value=0.1  Score=48.71  Aligned_cols=63  Identities=16%  Similarity=0.218  Sum_probs=46.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-cc------cccceeeec-cccc--CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-VE------AQHNLVLST-SYAA--HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~-~~------~~~~l~~~~-~~~~--~~~~vwiv  421 (529)
                      +|.++|+-   ..|.|+|..|+++|.+|+|  |+++..+.|+++-. ..      ...+ +.++ |+++  ++++++|+
T Consensus         1 KI~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~-i~~t~dl~~a~~~ad~Iii   75 (157)
T PF01210_consen    1 KIAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPEN-IKATTDLEEALEDADIIII   75 (157)
T ss_dssp             EEEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETT-EEEESSHHHHHTT-SEEEE
T ss_pred             CEEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcc-cccccCHHHHhCcccEEEe
Confidence            58899998   8999999999999999999  89999999987621 11      1123 3445 7874  77877664

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07832 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.063  Score=53.45  Aligned_cols=43  Identities=14%  Similarity=0.161  Sum_probs=36.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.+..+++.+++.
T Consensus         1 k~vlItGas~--giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~   45 (272)
T PRK07832          1 KRCFVTGAAS--GIGRATALRLAAQGAELFLTDRDADGLAQTVADAR   45 (272)
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            3689999998  9999999999999999888  78888777766643

>PRK06057 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.062  Score=52.79  Aligned_cols=44  Identities=16%  Similarity=0.122  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         7 ~~~vlItGasg--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~   52 (255)
T PRK06057          7 GRVAVITGGGS--GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG   52 (255)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Confidence            36899999998  9999999999999999988  88888887777654

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.47  E-value=0.17  Score=55.27  Aligned_cols=138  Identities=14%  Similarity=0.148  Sum_probs=86.1

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec-
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-  422 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-  422 (529)
                      ....++|+|+|. |  .||+.+|+.|...|.+|++  +++.+.......   +.     ++.++++  ..++++|  .| 
T Consensus       209 ~l~Gk~VlViG~-G--~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~---G~-----~v~~l~eal~~aDVVI~aTG~  277 (425)
T PRK05476        209 LIAGKVVVVAGY-G--DVGKGCAQRLRGLGARVIVTEVDPICALQAAMD---GF-----RVMTMEEAAELGDIFVTATGN  277 (425)
T ss_pred             CCCCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc---CC-----EecCHHHHHhCCCEEEECCCC
Confidence            335678999997 5  9999999999999999999  455443322111   11     1223343  5667766  33 


Q ss_pred             -CcCChhhhhcCCCCceeecccccCcc--------------CCCCCceeecCCc---ccc--CCCCccccccccccCcch
Q 009674          423 -DDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MII--PPSLSNMHSCENWLGRRV  482 (529)
Q Consensus       423 -~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~~~--P~~~~~~~~~e~~~p~r~  482 (529)
                       +.++.+....+++|++++-+..++.+              +.|+.+.-...|.   +.+  -+..-|+- |..+.|..+
T Consensus       278 ~~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~-~~~ghp~~v  356 (425)
T PRK05476        278 KDVITAEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLG-AATGHPSEV  356 (425)
T ss_pred             HHHHHHHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccC-CCCCCccee
Confidence             35777888899999999998876642              2233332111111   111  12355566 889999999


Q ss_pred             hHHHHHhhHhhhhcCCC
Q 009674          483 MSAWRIAGIIHALEGWD  499 (529)
Q Consensus       483 ~~Ac~a~~~v~alEgw~  499 (529)
                      |.--+|.=.+-+++=|.
T Consensus       357 md~sfa~q~l~~~~l~~  373 (425)
T PRK05476        357 MDMSFANQALAQIELFT  373 (425)
T ss_pred             eCHHHHHHHHHHHHHHh
Confidence            97766655555555443

>PLN02253 xanthoxin dehydrogenase

Probab=94.44  E-value=0.082  Score=52.70  Aligned_cols=45  Identities=16%  Similarity=0.163  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.+..+++.+++..
T Consensus        18 ~k~~lItGas~--gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   64 (280)
T PLN02253         18 GKVALVTGGAT--GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG   64 (280)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Confidence            46899999998  9999999999999999988  777777777777643

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.42  E-value=0.053  Score=56.15  Aligned_cols=43  Identities=21%  Similarity=0.303  Sum_probs=37.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+-|+++||++  =||.++|..|+++|.++.+  |..+|++.+++++
T Consensus        12 ~kvVvITGASs--GIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l   56 (282)
T KOG1205|consen   12 GKVVLITGASS--GIGEALAYELAKRGAKLVLVARRARRLERVAEEL   56 (282)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHH
Confidence            56789999995  9999999999999999777  8888888886663

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.42  E-value=0.13  Score=53.32  Aligned_cols=168  Identities=17%  Similarity=0.190  Sum_probs=90.2

Q ss_pred             CcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCC
Q 009674          273 IVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT  352 (529)
Q Consensus       273 ~~~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~~  352 (529)
                      |+--.+|.-.+++ +++.+.=..|++.|       +-|-.  ++.+|.+ .--|        |||--...+.--..+...
T Consensus        63 G~nVTiP~K~~~~-~~~D~l~~~A~~iG-------AVNTv--~~~~g~l-~G~N--------TD~~Gf~~~l~~~~~~~~  123 (288)
T PRK12749         63 GTGVSMPNKQLAC-EYVDELTPAAKLVG-------AINTI--VNDDGYL-RGYN--------TDGTGHIRAIKESGFDIK  123 (288)
T ss_pred             EEEECcCCHHHHH-HHhccCCHHHHHhC-------ceeEE--EccCCEE-EEEe--------cCHHHHHHHHHhcCCCcC
Confidence            4455667644333 33555555566554       44542  1233321 2223        556555555543344444


Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cch---hhHHHHHhhCccccccceeeeccc------c-c-CcceE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICK---DDYEKLKLRIPVEAQHNLVLSTSY------A-A-HKTKI  418 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~---~~~~~l~~~~~~~~~~~l~~~~~~------~-~-~~~~v  418 (529)
                      .++|+|.||-|  . ||||+..|++.|+ ++++  |++   ++.++|.+++....... +.+.++      + + .++++
T Consensus       124 ~k~vlvlGaGG--a-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~-~~~~~~~~~~~l~~~~~~aDi  199 (288)
T PRK12749        124 GKTMVLLGAGG--A-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTVTDLADQQAFAEALASADI  199 (288)
T ss_pred             CCEEEEECCcH--H-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCce-EEEechhhhhhhhhhcccCCE
Confidence            56899999987  3 8999999998887 5666  773   58888888765433221 112222      2 2 35677


Q ss_pred             EE----EcCcC--C---hhhhhcCCCCceeecccccCcc------CCC-CCceeecCCcccc
Q 009674          419 WL----VGDDL--T---GKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       419 wi----vg~~~--~---~~~q~~a~~G~~f~~~~~~~~~------~~R-~dc~y~~~~a~~~  464 (529)
                      +|    +|-.=  +   +.+....+++..+.|+. ..|.      ..| +-|....+..|-+
T Consensus       200 vINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v-Y~P~~T~ll~~A~~~G~~~~~Gl~ML~  260 (288)
T PRK12749        200 LTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGMLL  260 (288)
T ss_pred             EEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEec-CCCccCHHHHHHHHCCCeEECCHHHHH
Confidence            77    33210  0   01222346677777776 3333      112 4566666665543

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.41  E-value=0.17  Score=52.70  Aligned_cols=138  Identities=18%  Similarity=0.257  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCccee----------eecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKIK----------VVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~ir----------vv~Gns  339 (529)
                      .+-+.-+..-++.|++.|+++.-.  .       +++.++++|.|-   ++.+..= |++++.+          =|||=+
T Consensus        43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~  122 (295)
T PRK14174         43 PASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFH  122 (295)
T ss_pred             hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence            345555677788999999987654  3       444557888884   3555522 3324321          133322


Q ss_pred             ------------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhH
Q 009674          340 ------------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDY  390 (529)
Q Consensus       340 ------------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~l--~~~~~~  390 (529)
                                        -|++.|++-+.     -.-++|+++|...  -||+-+|..|.+    ++..|++  .++.  
T Consensus       123 ~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~atVt~~hs~t~--  198 (295)
T PRK14174        123 PENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN--IVGKPMANLMLQKLKESNCTVTICHSATK--  198 (295)
T ss_pred             hhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHhccccCCCEEEEEeCCch--
Confidence                              57777776554     3578999999997  999999999986    7888888  2111  


Q ss_pred             HHHHhhCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          391 EKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       391 ~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                         ++++  +.+|++|  +|  +.++++..   ++|++++|++ ++.
T Consensus       199 -------------------~l~~~~~~ADIvI~Avg~~~li~~~~v---k~GavVIDVg-i~~  238 (295)
T PRK14174        199 -------------------DIPSYTRQADILIAAIGKARFITADMV---KPGAVVIDVG-INR  238 (295)
T ss_pred             -------------------hHHHHHHhCCEEEEecCccCccCHHHc---CCCCEEEEee-ccc
Confidence                               1221  3556666  23  45677666   9999999998 654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=94.41  E-value=0.096  Score=51.41  Aligned_cols=139  Identities=16%  Similarity=0.167  Sum_probs=88.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Cccccccceeeeccccc--CcceEEE--EcCcCCh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLTG  427 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~~~  427 (529)
                      +|+++||+|  ++|+.++.-..+||.+|+-  ||..+...+|.. +.+   ..+...+++.+  ...+++|  .|.+...
T Consensus         2 KIaiIgAsG--~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q---~Difd~~~~a~~l~g~DaVIsA~~~~~~~   76 (211)
T COG2910           2 KIAIIGASG--KAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQ---KDIFDLTSLASDLAGHDAVISAFGAGASD   76 (211)
T ss_pred             eEEEEecCc--hhHHHHHHHHHhCCCeeEEEEeChHhccccccceeec---ccccChhhhHhhhcCCceEEEeccCCCCC
Confidence            689999999  9999999999999999998  999888654322 111   11111222221  3334444  4444333


Q ss_pred             hhh-----------------------------hcCCCCceeecccccCcc-------------CCC----CCceeecCCc
Q 009674          428 KEQ-----------------------------ARAPKGTIFIPYTQIPPR-------------KLR----KDCFYHSTPA  461 (529)
Q Consensus       428 ~~q-----------------------------~~a~~G~~f~~~~~~~~~-------------~~R----~dc~y~~~~a  461 (529)
                      +|.                             .-+-+|+..+|.-+||.+             .+|    -|-+|.+-++
T Consensus        77 ~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa  156 (211)
T COG2910          77 NDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAA  156 (211)
T ss_pred             hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHH
Confidence            322                             123456777777777753             122    5778999999


Q ss_pred             cccCCCCcc--------ccccccccCcchhHHHHHhhHhhhhcCCC
Q 009674          462 MIIPPSLSN--------MHSCENWLGRRVMSAWRIAGIIHALEGWD  499 (529)
Q Consensus       462 ~~~P~~~~~--------~~~~e~~~p~r~~~Ac~a~~~v~alEgw~  499 (529)
                      +-.|++=.|        +- .|-.=..|-.+|=-|.+|+-++|.=.
T Consensus       157 ~f~PGerTg~yrlggD~ll-~n~~G~SrIS~aDYAiA~lDe~E~~~  201 (211)
T COG2910         157 FFEPGERTGNYRLGGDQLL-VNAKGESRISYADYAIAVLDELEKPQ  201 (211)
T ss_pred             hcCCccccCceEeccceEE-EcCCCceeeeHHHHHHHHHHHHhccc
Confidence            999974111        11 22223467888899999999999733

>PRK06182 short chain dehydrogenase; Validated

Probab=94.40  E-value=0.066  Score=53.27  Aligned_cols=41  Identities=24%  Similarity=0.266  Sum_probs=35.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      .+.|+++|++|  .||+++|+.|+++|.+|.+  |+.++++++.+
T Consensus         3 ~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~l~~~~~   45 (273)
T PRK06182          3 KKVALVTGASS--GIGKATARRLAAQGYTVYGAARRVDKMEDLAS   45 (273)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence            36799999998  9999999999999999998  88888777654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.39  E-value=0.11  Score=50.48  Aligned_cols=44  Identities=23%  Similarity=0.323  Sum_probs=36.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+   |++++.+.+.++++
T Consensus         5 ~k~ilItGas~--gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~   51 (253)
T PRK08642          5 EQTVLVTGGSR--GLGAAIARAFAREGARVVVNYHQSEDAAEALADELG   51 (253)
T ss_pred             CCEEEEeCCCC--cHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence            36799999998  9999999999999999976   45666777766543

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=94.39  E-value=0.067  Score=56.74  Aligned_cols=138  Identities=17%  Similarity=0.193  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHH---hcCc-CCCcEEEEec
Q 009674          285 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVV---NSLP-KTTAHVLLRG  360 (529)
Q Consensus       285 in~~I~~Ai~~A~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~---~~i~-~~~~~V~~~G  360 (529)
                      |=-+|.+|...|.+.|.-=--   ||.   |-.. .+.+.|.-. -+.++-+|..=.++++.   +..+ -+.++|+|+|
T Consensus       110 IlGQVK~Ay~~A~~~g~~g~~---L~~---lf~~-A~~~aKrVR-teT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvIG  181 (338)
T PRK00676        110 IQGQVKRAYLKAARERKLPFA---LHF---LFQK-ALKEGKVFR-SKGGAPYAEVTIESVVQQELRRRQKSKKASLLFIG  181 (338)
T ss_pred             HHHHHHHHHHHHHHcCCchHH---HHH---HHHH-HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEEc
Confidence            334588999999998853111   121   1111 244444433 23444444332222233   3332 2578999999


Q ss_pred             ccCchhhHHHHHHHHhccCcE-EEe--cchhh--HHHHH-hhCccccccceeeecccccCcceEEEEcC--------cCC
Q 009674          361 TVTANKVANAVASSLCQMGIK-VAT--ICKDD--YEKLK-LRIPVEAQHNLVLSTSYAAHKTKIWLVGD--------DLT  426 (529)
Q Consensus       361 atg~~kig~ava~~L~~~~~~-v~l--~~~~~--~~~l~-~~~~~~~~~~l~~~~~~~~~~~~vwivg~--------~~~  426 (529)
                      | |  ++|+-+|++|.++|++ +++  |+.++  |+.+. +.+.-.             ..+||+|.+.        .++
T Consensus       182 a-G--em~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~-------------~~~DvVIs~t~~Tas~~p~i~  245 (338)
T PRK00676        182 Y-S--EINRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQ-------------DPYDVIFFGSSESAYAFPHLS  245 (338)
T ss_pred             c-c--HHHHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcc-------------cCCCEEEEcCCcCCCCCceee
Confidence            9 5  9999999999999854 666  55432  22211 000000             2446666542        445


Q ss_pred             hhhhhcCCCCceeecccccCcc
Q 009674          427 GKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       427 ~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      .++....++ -.|+|.+ +|+.
T Consensus       246 ~~~~~~~~~-r~~iDLA-vPRd  265 (338)
T PRK00676        246 WESLADIPD-RIVFDFN-VPRT  265 (338)
T ss_pred             HHHHhhccC-cEEEEec-CCCC
Confidence            555444443 4899999 7766

>PRK08862 short chain dehydrogenase; Provisional

Probab=94.37  E-value=0.056  Score=53.12  Aligned_cols=43  Identities=5%  Similarity=0.156  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus         5 ~k~~lVtGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i   49 (227)
T PRK08862          5 SSIILITSAGS--VLGRTISCHFARLGATLILCDQDQSALKDTYEQC   49 (227)
T ss_pred             CeEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence            46899999997  9999999999999999999  8999888877664

>PRK06181 short chain dehydrogenase; Provisional

Probab=94.37  E-value=0.092  Score=51.65  Aligned_cols=42  Identities=17%  Similarity=0.287  Sum_probs=35.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.|+|+|++|  .||+++|+.|+++|.+|++  |+.++.+++.+++
T Consensus         2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l   45 (263)
T PRK06181          2 KVVIITGASE--GIGRALAVRLARAGAQLVLAARNETRLASLAQEL   45 (263)
T ss_pred             CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            4689999998  9999999999999999998  7777777666554

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.36  E-value=0.071  Score=47.59  Aligned_cols=98  Identities=11%  Similarity=0.106  Sum_probs=54.1

Q ss_pred             EEEEecccCchhhHHHHHHHHh-ccCcEEEe---cchhhHHHHHhhCccccccceeeecc--ccc-CcceEEE--EcCcC
Q 009674          355 HVLLRGTVTANKVANAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTS--YAA-HKTKIWL--VGDDL  425 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~-~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~--~~~-~~~~vwi--vg~~~  425 (529)
                      +|+++||||  -+|+.+++.|. .....+..   ++++.-+.+....+.-.+..-+.+.+  .++ .++++++  .++..
T Consensus         1 rV~IvGAtG--~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~   78 (121)
T PF01118_consen    1 RVAIVGATG--YVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA   78 (121)
T ss_dssp             EEEEESTTS--HHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH
T ss_pred             CEEEECCCC--HHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH
Confidence            589999999  99999999999 55666555   33312233333322111111122333  223 6778866  33332


Q ss_pred             Chhh-hhcCCCCceeecccccCcc-CCCCCceee
Q 009674          426 TGKE-QARAPKGTIFIPYTQIPPR-KLRKDCFYH  457 (529)
Q Consensus       426 ~~~~-q~~a~~G~~f~~~~~~~~~-~~R~dc~y~  457 (529)
                      +.+- ..-+++|..++|.|   .. .+.+||.|.
T Consensus        79 ~~~~~~~~~~~g~~ViD~s---~~~R~~~~~~~~  109 (121)
T PF01118_consen   79 SKELAPKLLKAGIKVIDLS---GDFRLDDDVPYG  109 (121)
T ss_dssp             HHHHHHHHHHTTSEEEESS---STTTTSTTSEEE
T ss_pred             HHHHHHHHhhCCcEEEeCC---HHHhCCCCCCEE
Confidence            2222 22248999888887   22 333566664

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK07576 short chain dehydrogenase; Provisional

Probab=94.35  E-value=0.099  Score=51.99  Aligned_cols=44  Identities=14%  Similarity=0.288  Sum_probs=37.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++
T Consensus         8 ~~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   53 (264)
T PRK07576          8 AGKNVVVVGGTS--GINLGIAQAFARAGANVAVASRSQEKVDAAVAQL   53 (264)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  7888777665554

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.34  E-value=0.067  Score=53.08  Aligned_cols=44  Identities=20%  Similarity=0.222  Sum_probs=37.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+.+++++
T Consensus         6 ~~k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l   51 (276)
T PRK05875          6 QDRTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI   51 (276)
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence            357899999998  9999999999999999998  7777777766654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.33  E-value=0.09  Score=50.40  Aligned_cols=41  Identities=22%  Similarity=0.266  Sum_probs=33.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~  396 (529)
                      ++|+++|++|  .||+++|+.|+++|.+|++   ++.++.+.+.++
T Consensus         7 ~~vlItGasg--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~   50 (249)
T PRK12825          7 RVALVTGAAR--GLGRAIALRLARAGADVVVHYRSDEEAAEELVEA   50 (249)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence            5899999998  9999999999999999876   445555555554

>PRK12828 short chain dehydrogenase; Provisional

Probab=94.32  E-value=0.066  Score=51.22  Aligned_cols=42  Identities=19%  Similarity=0.119  Sum_probs=34.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      .+.|+++|++|  .||+++|+.|+++|.+|.+  |+.++.++..++
T Consensus         7 ~k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~   50 (239)
T PRK12828          7 GKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQTLPG   50 (239)
T ss_pred             CCEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH
Confidence            45799999998  9999999999999999888  766665544333

>PRK12742 oxidoreductase; Provisional

Probab=94.28  E-value=0.073  Score=51.30  Aligned_cols=44  Identities=23%  Similarity=0.240  Sum_probs=36.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+   +++++.+++.++++
T Consensus         6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~   52 (237)
T PRK12742          6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG   52 (237)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC
Confidence            46899999998  9999999999999999876   46677777766543

>PRK08703 short chain dehydrogenase; Provisional

Probab=94.27  E-value=0.061  Score=52.21  Aligned_cols=44  Identities=20%  Similarity=0.250  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+.+.+++.
T Consensus         6 ~k~vlItG~sg--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~   51 (239)
T PRK08703          6 DKTILVTGASQ--GLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIV   51 (239)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHH
Confidence            36899999998  9999999999999999998  88888888777653

>PRK07806 short chain dehydrogenase; Provisional

Probab=94.26  E-value=0.098  Score=50.88  Aligned_cols=43  Identities=21%  Similarity=0.224  Sum_probs=34.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+. ++.+++.+++
T Consensus         6 ~k~vlItGasg--giG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l   51 (248)
T PRK07806          6 GKTALVTGSSR--GIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI   51 (248)
T ss_pred             CcEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence            36799999998  9999999999999999877  654 4556555543

>PLN00198 anthocyanidin reductase; Provisional

Probab=94.25  E-value=0.098  Score=53.89  Aligned_cols=42  Identities=21%  Similarity=0.184  Sum_probs=34.2

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~  392 (529)
                      .|...++|+++|++|  -||+.+++.|.++|.+|..  |+.+....
T Consensus         5 ~~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~~~r~~~~~~~   48 (338)
T PLN00198          5 TPTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNTTVRDPENQKK   48 (338)
T ss_pred             cCCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEEEECCCCCHHH
Confidence            366678899999999  9999999999999999854  66554443

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=94.24  E-value=0.12  Score=53.31  Aligned_cols=44  Identities=16%  Similarity=0.117  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|+++  -||+++|+.|+++| .+|.+  |++++.+++++++.
T Consensus         3 ~k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~   49 (314)
T TIGR01289         3 KPTVIITGASS--GLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG   49 (314)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            45889999997  99999999999999 99888  88888888887764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PLN02583 cinnamoyl-CoA reductase

Probab=94.18  E-value=0.13  Score=52.30  Aligned_cols=31  Identities=16%  Similarity=0.111  Sum_probs=28.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..+.|+|+|++|  -||+++++.|.++|.+|..
T Consensus         5 ~~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~   35 (297)
T PLN02583          5 SSKSVCVMDASG--YVGFWLVKRLLSRGYTVHA   35 (297)
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            356899999999  9999999999999999987

>PRK08628 short chain dehydrogenase; Provisional

Probab=94.17  E-value=0.1  Score=51.13  Aligned_cols=42  Identities=14%  Similarity=0.189  Sum_probs=34.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ..+.++++||+|  -||+++|+.|+++|.+|.+  |+++.. ++.++
T Consensus         6 ~~~~ilItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~   49 (258)
T PRK08628          6 KDKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE   49 (258)
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH
Confidence            456899999998  9999999999999999988  666655 44344

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=94.14  E-value=0.13  Score=53.95  Aligned_cols=117  Identities=15%  Similarity=0.086  Sum_probs=75.4

Q ss_pred             ceeeecCCCCcc--eee-ecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHHHHHHHHh-ccCc-EEEe--
Q 009674          320 EIYLERQPNKLK--IKV-VDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVANAVASSLC-QMGI-KVAT--  384 (529)
Q Consensus       320 ~~~~~k~p~~L~--irv-v~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~ava~~L~-~~~~-~v~l--  384 (529)
                      +..+.-.|+ -.  ..+ .||+.+|+       ++....+ +++.++|.++|+-   ..|++.+++|+ .+++ +|.+  
T Consensus        86 g~i~l~d~~-tG~~~ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGaG---~qA~~~~~al~~~~~i~~v~V~~  161 (326)
T TIGR02992        86 GMMVLLSSR-TGLLQALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGAG---MQARLQLEALTLVRDIRSARIWA  161 (326)
T ss_pred             EEEEEEECC-CCCceEEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCC---HHHHHHHHHHHHhCCccEEEEEC
Confidence            355555554 22  344 47877764       1222222 5677899999996   79999999998 4664 4666  


Q ss_pred             cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC-----cCChhhhhcCCCCceeeccc
Q 009674          385 ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       385 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~q~~a~~G~~f~~~~  443 (529)
                      |+.++.+++.+++..+.+.......++++  ++++|++.-.     .++++.   .++|+++..+.
T Consensus       162 R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p~i~~~~---l~~g~~i~~vg  224 (326)
T TIGR02992       162 RDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETPILHAEW---LEPGQHVTAMG  224 (326)
T ss_pred             CCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCcEecHHH---cCCCcEEEeeC
Confidence            99999999988875443333122336664  7788877322     244444   48999988775

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=94.11  E-value=0.083  Score=53.57  Aligned_cols=34  Identities=24%  Similarity=0.204  Sum_probs=29.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      ++|+|+|+||  -||+.+++.|.++|.+|..  |+.++
T Consensus         5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          5 KVVCVTGASG--YIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CEEEEECChH--HHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            6899999999  9999999999999999876  66554

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=94.10  E-value=0.12  Score=53.52  Aligned_cols=42  Identities=14%  Similarity=0.107  Sum_probs=33.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.|+|+|++|  -||+++++.|+++|  .+|.+  |+..+.+++++++
T Consensus         5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~   50 (324)
T TIGR03589         5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF   50 (324)
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh
Confidence            5799999999  99999999999876  67776  6665555665554

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.08  E-value=0.085  Score=52.62  Aligned_cols=43  Identities=12%  Similarity=0.079  Sum_probs=37.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+++|++|  -||+++|+.|.++|.+|.+  |+.+++++++++.+
T Consensus         4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~   48 (275)
T PRK08263          4 KVWFITGASR--GFGRAWTEAALERGDRVVATARDTATLADLAEKYG   48 (275)
T ss_pred             CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc
Confidence            5799999998  9999999999999999888  88888888876653

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.08  E-value=0.095  Score=53.99  Aligned_cols=43  Identities=16%  Similarity=0.175  Sum_probs=35.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~----------~~~~~~l~~~~  397 (529)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+  |+          +++.+++++++
T Consensus         8 ~k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l   62 (305)
T PRK08303          8 GKVALVAGATR--GAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELV   62 (305)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHH
Confidence            46899999997  8999999999999999988  65          35666666554

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.04  E-value=0.086  Score=50.64  Aligned_cols=39  Identities=18%  Similarity=0.333  Sum_probs=31.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +|.|+|+ |  .+|+.+|..+++.|.+|.+  ++++.+++.+++
T Consensus         1 ~V~ViGa-G--~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    1 KVAVIGA-G--TMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EEEEES--S--HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             CEEEEcC-C--HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            5899999 5  9999999999999999999  777766655444

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK08177 short chain dehydrogenase; Provisional

Probab=94.04  E-value=0.073  Score=51.40  Aligned_cols=40  Identities=15%  Similarity=0.183  Sum_probs=34.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +.|+++|++|  .||+++|+.|+++|.+|++  |+.++.+++++
T Consensus         2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~   43 (225)
T PRK08177          2 RTALIIGASR--GLGLGLVDRLLERGWQVTATVRGPQQDTALQA   43 (225)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh
Confidence            5799999998  9999999999999999998  77777666643

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=93.97  E-value=0.058  Score=56.39  Aligned_cols=68  Identities=19%  Similarity=0.315  Sum_probs=46.5

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc---ccceeeeccccc-CcceEEEE
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~---~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      |...+|.++|| |  .||+++|..|+.+|+  ++.|  +++++++-...++....   ...-+...++++ ++++|+|+
T Consensus         4 ~~~~ki~iiGa-G--~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIi   79 (315)
T PRK00066          4 KQHNKVVLVGD-G--AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVI   79 (315)
T ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEE
Confidence            33459999999 8  999999999998888  5666  66777665555433221   111123337777 89988775

>PRK07904 short chain dehydrogenase; Provisional

Probab=93.96  E-value=0.098  Score=51.96  Aligned_cols=45  Identities=13%  Similarity=0.222  Sum_probs=36.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhh-HHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDD-YEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~-~~~l~~~~~~  399 (529)
                      .+.|+++|++|  -||+++|+.|+++| .+|.+  |+.++ ++++.+++..
T Consensus         8 ~~~vlItGas~--giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~   56 (253)
T PRK07904          8 PQTILLLGGTS--EIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKA   56 (253)
T ss_pred             CcEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHh
Confidence            34799999998  99999999999885 89888  87775 7777666533

>PRK07035 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.089  Score=51.39  Aligned_cols=44  Identities=23%  Similarity=0.228  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++.
T Consensus         8 ~k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   53 (252)
T PRK07035          8 GKIALVTGASR--GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIV   53 (252)
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888777653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=93.91  E-value=0.071  Score=52.02  Aligned_cols=45  Identities=16%  Similarity=0.200  Sum_probs=38.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~   57 (247)
T PRK08945         11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGRTEEKLEAVYDEIE   57 (247)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  88777777766644

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.91  E-value=0.12  Score=53.70  Aligned_cols=148  Identities=22%  Similarity=0.262  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 009674          283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS-  338 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn-  338 (529)
                      .+-+.-+....+.|++.|++..-  |.       +++.++++|.|-   |+.+..= |++++.          +=|||= 
T Consensus        44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~  123 (284)
T PRK14190         44 PASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFH  123 (284)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence            34455566777889999998754  44       334447788885   3555422 332431          123332 


Q ss_pred             ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          339 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       339 ---------------sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                                     .-|+..|++=+     +-.-++|+|+|.+.  -||+-+|..|.++|-.|++ .++.  .      
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~atVt~chs~t--~------  193 (284)
T PRK14190        124 PINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSN--IVGKPVGQLLLNENATVTYCHSKT--K------  193 (284)
T ss_pred             HhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEEeCCc--h------
Confidence                           23666666543     44688999999998  9999999999999999998 2111  1      


Q ss_pred             ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCcee
Q 009674          398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  456 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y  456 (529)
                                  ++++  +.+||+|  +|  +.++++..   ++|+++||+. +++.   ++--|+-+
T Consensus       194 ------------~l~~~~~~ADIvI~AvG~p~~i~~~~i---k~gavVIDvG-i~~~~~gkl~GDvd~  245 (284)
T PRK14190        194 ------------NLAELTKQADILIVAVGKPKLITADMV---KEGAVVIDVG-VNRLENGKLCGDVDF  245 (284)
T ss_pred             ------------hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-ccccCCCCeeccCcH
Confidence                        2322  3556655  33  35777777   9999999998 6652   44455553

>PRK09134 short chain dehydrogenase; Provisional

Probab=93.91  E-value=0.14  Score=50.34  Aligned_cols=44  Identities=27%  Similarity=0.437  Sum_probs=35.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   ++.++.+.+.+++
T Consensus         8 ~~k~vlItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   54 (258)
T PRK09134          8 APRAALVTGAAR--RIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI   54 (258)
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999976   4556666665553

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.91  E-value=0.23  Score=51.33  Aligned_cols=63  Identities=21%  Similarity=0.159  Sum_probs=45.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~  400 (529)
                      |||.-...+.--+..+...++|++.||-|   .|||++-.|++.|++ +.+  |+.+|-++|.+++...
T Consensus       109 TD~~Gf~~~L~~~~~~~~~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~  174 (283)
T PRK14027        109 TDVSGFGRGMEEGLPNAKLDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_pred             CCHHHHHHHHHhcCcCcCCCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence            66666655553222233457899999986   589999999999974 555  8999999998876543

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=93.90  E-value=0.18  Score=51.89  Aligned_cols=120  Identities=18%  Similarity=0.170  Sum_probs=69.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  411 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~  411 (529)
                      |||-....+.--..++. .++|++.||-|   .|||++.+|.+.|++ +.+  |+.++-++|.+++..+...      ++
T Consensus       105 TD~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~~------~~  174 (272)
T PRK12550        105 TDYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEWRP------DL  174 (272)
T ss_pred             cCHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcchh------hc
Confidence            66666655543333433 35899999976   589999999998975 777  9999999998875422210      11


Q ss_pred             ccCcceEEE----EcCc--C----ChhhhhcCCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674          412 AAHKTKIWL----VGDD--L----TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       412 ~~~~~~vwi----vg~~--~----~~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  464 (529)
                      ....++++|    +|-.  .    .|-+....+++..+.|..--|++     +.| +-|.+..+..|-+
T Consensus       175 ~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~i~Gl~MLi  243 (272)
T PRK12550        175 GGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAETPLIRYARARGKTVITGAEVIA  243 (272)
T ss_pred             ccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccCHHHHHHHHCcCeEeCCHHHHH
Confidence            112345555    2211  0    01112234667777777733332     222 5566666666644

>PRK06197 short chain dehydrogenase; Provisional

Probab=93.89  E-value=0.077  Score=53.95  Aligned_cols=44  Identities=20%  Similarity=0.201  Sum_probs=36.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.++..+++
T Consensus        15 ~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l   60 (306)
T PRK06197         15 SGRVAVVTGANT--GLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI   60 (306)
T ss_pred             CCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            457899999998  9999999999999999877  8877766554443

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.88  E-value=0.094  Score=50.56  Aligned_cols=42  Identities=19%  Similarity=0.233  Sum_probs=37.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  .||+++|+.|+++|.+|.+  |+.++.+.+.+++
T Consensus         6 ~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (238)
T PRK05786          6 KKVAIIGVSE--GLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL   49 (238)
T ss_pred             cEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            5899999998  9999999999999999998  8888887775554

>PRK05693 short chain dehydrogenase; Provisional

Probab=93.83  E-value=0.093  Score=52.21  Aligned_cols=41  Identities=24%  Similarity=0.306  Sum_probs=35.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+.++++
T Consensus         2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~   44 (274)
T PRK05693          2 PVVLITGCSS--GIGRALADAFKAAGYEVWATARKAEDVEALAAA   44 (274)
T ss_pred             CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC
Confidence            4789999998  9999999999999999988  888887777543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=93.82  E-value=0.1  Score=51.84  Aligned_cols=44  Identities=16%  Similarity=0.290  Sum_probs=36.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~  399 (529)
                      ..|+++|++|  -||+++|+.|+++|.+|.+   +++++++.+.+++..
T Consensus         2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~   48 (267)
T TIGR02685         2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNA   48 (267)
T ss_pred             CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHh
Confidence            4689999998  8999999999999999988   456778777766543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN02427 UDP-apiose/xylose synthase

Probab=93.82  E-value=0.14  Score=53.94  Aligned_cols=43  Identities=16%  Similarity=0.210  Sum_probs=33.8

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~  394 (529)
                      |-...+|+|+|+||  =||+.+++.|.++ |.+|..  |+.++.+.+.
T Consensus        11 ~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~   56 (386)
T PLN02427         11 PIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALDVYNDKIKHLL   56 (386)
T ss_pred             cccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEecCchhhhhhh
Confidence            44566899999999  9999999999987 588876  5555555443

>PRK06953 short chain dehydrogenase; Provisional

Probab=93.81  E-value=0.091  Score=50.61  Aligned_cols=40  Identities=15%  Similarity=0.161  Sum_probs=35.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +.|+|+|++|  .||+++|+.|+++|.+|.+  |+.++.+++++
T Consensus         2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~   43 (222)
T PRK06953          2 KTVLIVGASR--GIGREFVRQYRADGWRVIATARDAAALAALQA   43 (222)
T ss_pred             ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            4689999998  9999999999999999988  77777777764

>PRK06914 short chain dehydrogenase; Provisional

Probab=93.80  E-value=0.099  Score=52.00  Aligned_cols=42  Identities=14%  Similarity=0.135  Sum_probs=36.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.++++|++|  -||+++|+.|.++|.+|.+  |+.++.+++++++
T Consensus         4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   47 (280)
T PRK06914          4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA   47 (280)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence            5689999998  9999999999999999988  8888887776653

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.78  E-value=0.39  Score=50.11  Aligned_cols=140  Identities=15%  Similarity=0.209  Sum_probs=90.2

Q ss_pred             hHHHHHHHHHHHHHHHHcCCcE--EEeccccc-------ccccccCC---ceeeecC-CCCcce----------eeecCC
Q 009674          282 REAINSLIEEAILEADAKGVKV--ISLGLLNQ-------GEELNRNG---EIYLERQ-PNKLKI----------KVVDGS  338 (529)
Q Consensus       282 ~~~in~~I~~Ai~~A~k~G~kv--~~LG~ln~-------~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn  338 (529)
                      ..+-+.-+....+.|++.|++.  .-|..-.+       ++++|.|-   ++.++.= |++++.          +=|||=
T Consensus        42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl  121 (293)
T PRK14185         42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF  121 (293)
T ss_pred             CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence            3445555667788999999998  45554332       25788874   3555532 333432          123332


Q ss_pred             h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 009674          339 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK  392 (529)
Q Consensus       339 s----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~l-~~~~~~~~  392 (529)
                      +                -|++.|++=+     +-.-++|+++|...  -||+-+|..|.++    +..|++ .++-    
T Consensus       122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T----  195 (293)
T PRK14185        122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSN--IVGKPMAQLMMQKAYPGDCTVTVCHSRS----  195 (293)
T ss_pred             CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHcCCCCCCCEEEEecCCC----
Confidence            2                2677776644     44678999999997  9999999999987    678888 2111    


Q ss_pred             HHhhCccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 009674          393 LKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       393 l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                      .++++  +.+||+|  +|+  .++++..   ++|+++||+. +.+
T Consensus       196 ----------------~nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~  236 (293)
T PRK14185        196 ----------------KNLKKECLEADIIIAALGQPEFVKADMV---KEGAVVIDVG-TTR  236 (293)
T ss_pred             ----------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence                            12332  3566766  443  4676655   9999999998 654

>PLN02650 dihydroflavonol-4-reductase

Probab=93.76  E-value=0.13  Score=53.43  Aligned_cols=42  Identities=17%  Similarity=0.163  Sum_probs=34.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ..++|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.++.
T Consensus         4 ~~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~   47 (351)
T PLN02650          4 QKETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPANVKKVKH   47 (351)
T ss_pred             CCCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH
Confidence            356899999999  9999999999999999976  66666555443

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.74  E-value=0.11  Score=51.90  Aligned_cols=34  Identities=12%  Similarity=0.221  Sum_probs=29.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.+
T Consensus         6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~   41 (273)
T PRK08278          6 GKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAE   41 (273)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecccc
Confidence            36799999998  9999999999999999988  5543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=93.73  E-value=0.13  Score=49.03  Aligned_cols=86  Identities=16%  Similarity=0.157  Sum_probs=58.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      ..++|.++|.-   .||+++|+.|..-|.+|..  |+.+.-+.... ..       +...++++  +.++++++      
T Consensus        35 ~g~tvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~-------~~~~~l~ell~~aDiv~~~~plt~  103 (178)
T PF02826_consen   35 RGKTVGIIGYG---RIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FG-------VEYVSLDELLAQADIVSLHLPLTP  103 (178)
T ss_dssp             TTSEEEEESTS---HHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TT-------EEESSHHHHHHH-SEEEE-SSSST
T ss_pred             CCCEEEEEEEc---CCcCeEeeeeecCCceeEEecccCChhhhccc-cc-------ceeeehhhhcchhhhhhhhhcccc
Confidence            46789999985   9999999999999999999  43333221111 11       12335554  55666541      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                        -..|+.++..+||+|++|+-++|   |+.+
T Consensus       104 ~T~~li~~~~l~~mk~ga~lvN~aRG~~vde~  135 (178)
T PF02826_consen  104 ETRGLINAEFLAKMKPGAVLVNVARGELVDED  135 (178)
T ss_dssp             TTTTSBSHHHHHTSTTTEEEEESSSGGGB-HH
T ss_pred             ccceeeeeeeeeccccceEEEeccchhhhhhh
Confidence              35688899999999999999999   5554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=93.73  E-value=0.14  Score=49.89  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         4 ~~k~vlItGas~--gIG~~ia~~l~~~G~~vi~   34 (248)
T TIGR01832         4 EGKVALVTGANT--GLGQGIAVGLAEAGADIVG   34 (248)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence            346899999998  9999999999999999998

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12937 short chain dehydrogenase; Provisional

Probab=93.68  E-value=0.16  Score=49.04  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=33.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.++++  + ++++.+++.+++
T Consensus         5 ~~~vlItG~~~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   50 (245)
T PRK12937          5 NKVAIVTGASR--GIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI   50 (245)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999877  3 344455554443

>PRK07060 short chain dehydrogenase; Provisional

Probab=93.68  E-value=0.13  Score=49.74  Aligned_cols=44  Identities=23%  Similarity=0.316  Sum_probs=38.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.++++|++|  -||+++|+.|.++|.+|.+  |+.++.+++.++.
T Consensus         8 ~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~   53 (245)
T PRK07060          8 SGKSVLVTGASS--GIGRACAVALAQRGARVVAAARNAAALDRLAGET   53 (245)
T ss_pred             CCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            446899999998  9999999999999999988  8888888777664

>PRK12827 short chain dehydrogenase; Provisional

Probab=93.67  E-value=0.16  Score=48.99  Aligned_cols=43  Identities=21%  Similarity=0.291  Sum_probs=34.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe------cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT------ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l------~~~~~~~~l~~~~  397 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+      ++++..+++.+++
T Consensus         6 ~~~ilItGasg--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~   54 (249)
T PRK12827          6 SRRVLITGGSG--GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGI   54 (249)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHH
Confidence            36799999998  9999999999999999877      3455666665554

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.67  E-value=0.073  Score=54.72  Aligned_cols=88  Identities=15%  Similarity=0.141  Sum_probs=56.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-------------cc---ccceeeec-cccc-
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-------------EA---QHNLVLST-SYAA-  413 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~-------------~~---~~~l~~~~-~~~~-  413 (529)
                      ++|.|+|+-   .+|+.+|..|++.|.+|++  ++++.++..++++..             +.   ....+..+ ++++ 
T Consensus         6 ~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~   82 (286)
T PRK07819          6 QRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF   82 (286)
T ss_pred             cEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence            579999995   9999999999999999999  788877763322111             10   01112233 7765 


Q ss_pred             CcceEEE--EcCcCChh-----hhhcC--CCCceeecccc
Q 009674          414 HKTKIWL--VGDDLTGK-----EQARA--PKGTIFIPYTQ  444 (529)
Q Consensus       414 ~~~~vwi--vg~~~~~~-----~q~~a--~~G~~f~~~~~  444 (529)
                      ++++++|  |-+.++-+     +..++  ++|++++.-+-
T Consensus        83 ~~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS  122 (286)
T PRK07819         83 ADRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS  122 (286)
T ss_pred             CCCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            7887766  32322222     12243  88999987665

>PRK09242 tropinone reductase; Provisional

Probab=93.66  E-value=0.095  Score=51.46  Aligned_cols=44  Identities=16%  Similarity=0.228  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         9 ~k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~   54 (257)
T PRK09242          9 GQTALITGASK--GIGLAIAREFLGLGADVLIVARDADALAQARDELA   54 (257)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  88888888777643

>PRK07985 oxidoreductase; Provisional

Probab=93.65  E-value=0.13  Score=52.38  Aligned_cols=42  Identities=21%  Similarity=0.296  Sum_probs=33.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~--~~~~~~l~~~  396 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+  +++.+++++.
T Consensus        49 ~k~vlITGas~--gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~   94 (294)
T PRK07985         49 DRKALVTGGDS--GIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKI   94 (294)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHH
Confidence            36899999998  9999999999999999988  32  3455555544

>PRK08291 ectoine utilization protein EutC; Validated

Probab=93.59  E-value=0.21  Score=52.44  Aligned_cols=117  Identities=11%  Similarity=0.049  Sum_probs=71.6

Q ss_pred             ceeeecCCCCcc--eee-ecCChhHHH-----HHH--hcC-cCCCcEEEEecccCchhhHHHHHHHHhc-cC-cEEEe--
Q 009674          320 EIYLERQPNKLK--IKV-VDGSSLAAA-----VVV--NSL-PKTTAHVLLRGTVTANKVANAVASSLCQ-MG-IKVAT--  384 (529)
Q Consensus       320 ~~~~~k~p~~L~--irv-v~Gnsltaa-----vv~--~~i-~~~~~~V~~~Gatg~~kig~ava~~L~~-~~-~~v~l--  384 (529)
                      +..+.-+++ ..  .-+ .+|+.+|+.     ..+  ... +++.++|.++|+-   ..|++.+.+|+. ++ .+|.+  
T Consensus        89 g~i~l~d~~-tG~~~ai~~d~~~lt~~rT~a~~~~a~~~la~~~~~~v~IiGaG---~~a~~~~~al~~~~~~~~V~v~~  164 (330)
T PRK08291         89 GLMVVLSAR-TGLVEALLLDNGYLTDVRTAAAGAVAARHLAREDASRAAVIGAG---EQARLQLEALTLVRPIREVRVWA  164 (330)
T ss_pred             EEEEEEeCC-CCceEEEEcCCchHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEc
Confidence            355555554 22  233 378777641     111  212 4567899999997   679999999983 55 45666  


Q ss_pred             cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cC-cCChhhhhcCCCCceeeccc
Q 009674          385 ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD-DLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       385 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~-~~~~~~q~~a~~G~~f~~~~  443 (529)
                      |++++.+++.+++..+.+.......++++  +++++++.    .+ .++.+   +.++|+++..+.
T Consensus       165 R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p~i~~~---~l~~g~~v~~vg  227 (330)
T PRK08291        165 RDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEPILKAE---WLHPGLHVTAMG  227 (330)
T ss_pred             CCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCcEecHH---HcCCCceEEeeC
Confidence            99999999998865443333112336664  67777662    22 23332   347888877653

>PRK12743 oxidoreductase; Provisional

Probab=93.59  E-value=0.15  Score=50.17  Aligned_cols=42  Identities=12%  Similarity=0.179  Sum_probs=35.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   +++++.+.+.+++
T Consensus         3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~   47 (256)
T PRK12743          3 QVAIVTASDS--GIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV   47 (256)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence            5799999997  9999999999999999977   4666777666654

>PRK06123 short chain dehydrogenase; Provisional

Probab=93.57  E-value=0.15  Score=49.49  Aligned_cols=42  Identities=19%  Similarity=0.213  Sum_probs=33.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      +.++++|++|  -||+++|+.|+++|.+|.+   +++++.+.+.+++
T Consensus         3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l   47 (248)
T PRK06123          3 KVMIITGASR--GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI   47 (248)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH
Confidence            4789999998  9999999999999988877   4555666555544

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=93.56  E-value=0.06  Score=53.86  Aligned_cols=101  Identities=19%  Similarity=0.194  Sum_probs=63.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCcceEEEEcCcCChhhhhc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR  432 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~  432 (529)
                      .|+|+|+||  -||+++++.|.++|.+|..  |+.+....+.        .            -..|+.++..+.+....
T Consensus         2 ~ILVtG~tG--fiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~------------~~~~~~~d~~~~~~~~~   59 (314)
T COG0451           2 RILVTGGAG--FIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------S------------GVEFVVLDLTDRDLVDE   59 (314)
T ss_pred             eEEEEcCcc--cHHHHHHHHHHhCCCeEEEEeCCCccccccc--------c------------ccceeeecccchHHHHH
Confidence            399999999  9999999999999999998  3333222111        0            01255555555433322


Q ss_pred             CCCCceeecccccCccCCCCCceeecCCccccCCCCcc----ccccccccCcchhHHHHHhhH
Q 009674          433 APKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSN----MHSCENWLGRRVMSAWRIAGI  491 (529)
Q Consensus       433 a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~----~~~~e~~~p~r~~~Ac~a~~~  491 (529)
                      +..+             .+ |+.++-......+....+    +..-|....++++.||.++++
T Consensus        60 ~~~~-------------~~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~  108 (314)
T COG0451          60 LAKG-------------VP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV  108 (314)
T ss_pred             HHhc-------------CC-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            2222             11 777777777666665432    445677778888888888444

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.54  E-value=0.16  Score=50.61  Aligned_cols=32  Identities=19%  Similarity=0.388  Sum_probs=27.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~   37 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGAELAF   37 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE
Confidence            35799999853247999999999999999988

>PLN02686 cinnamoyl-CoA reductase

Probab=93.54  E-value=0.16  Score=53.62  Aligned_cols=42  Identities=26%  Similarity=0.321  Sum_probs=35.0

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      ...+.|+|+|++|  -||+++++.|.++|.+|.+  |+.++.+.++
T Consensus        51 ~~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         51 AEARLVCVTGGVS--FLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            3567899999999  9999999999999999875  7766665553

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=93.49  E-value=0.13  Score=55.61  Aligned_cols=88  Identities=17%  Similarity=0.138  Sum_probs=60.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeecccc---c--CcceEEE--EcC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA---A--HKTKIWL--VGD  423 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~---~--~~~~vwi--vg~  423 (529)
                      ..|++.|+ |  .||+++|..|++++ .+|++  |+.+...+++.....+.+-..+.+.+.+   +  ++.+++|  +.-
T Consensus         2 ~~ilviGa-G--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~   78 (389)
T COG1748           2 MKILVIGA-G--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP   78 (389)
T ss_pred             CcEEEECC-c--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence            47899999 7  99999999999888 88888  9999999998875333322223444443   2  5557766  222


Q ss_pred             cCChhh-hhcCCCCceeecccc
Q 009674          424 DLTGKE-QARAPKGTIFIPYTQ  444 (529)
Q Consensus       424 ~~~~~~-q~~a~~G~~f~~~~~  444 (529)
                      .++..= +.=++.|+.++|.|-
T Consensus        79 ~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          79 FVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             hhhHHHHHHHHHhCCCEEEccc
Confidence            222221 124578999999995

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=93.43  E-value=0.17  Score=48.87  Aligned_cols=42  Identities=26%  Similarity=0.196  Sum_probs=34.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  -||+++++.|+++|.+|.+   |+.++.+++.+++
T Consensus         2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~   46 (247)
T PRK09730          2 AIALVTGGSR--GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLI   46 (247)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence            4689999998  9999999999999999865   6666666555553

>PRK06128 oxidoreductase; Provisional

Probab=93.39  E-value=0.15  Score=51.95  Aligned_cols=43  Identities=19%  Similarity=0.285  Sum_probs=33.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~--~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  ++  .++.+++.+++
T Consensus        55 ~k~vlITGas~--gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~  101 (300)
T PRK06128         55 GRKALITGADS--GIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLI  101 (300)
T ss_pred             CCEEEEecCCC--cHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHH
Confidence            46899999998  9999999999999999988  32  23444444443

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.32  E-value=0.18  Score=49.12  Aligned_cols=41  Identities=15%  Similarity=0.229  Sum_probs=31.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~  396 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+ .+..+++.++
T Consensus         3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~   46 (256)
T PRK12745          3 PVALVTGGRR--GIGLGIARALAAAGFDLAINDRPDDEELAATQQE   46 (256)
T ss_pred             cEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Confidence            5799999998  9999999999999999888  43 3444444333

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=93.32  E-value=0.12  Score=51.19  Aligned_cols=39  Identities=18%  Similarity=0.242  Sum_probs=33.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  393 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l  393 (529)
                      .++|+++||+|  .||+++++.|.++|.+|+.  |+.++.+.+
T Consensus        17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~   57 (251)
T PLN00141         17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAGVRDVDKAKTS   57 (251)
T ss_pred             CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence            56899999999  9999999999999999876  777776544

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.32  E-value=0.29  Score=50.72  Aligned_cols=139  Identities=19%  Similarity=0.239  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 009674          283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS-  338 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn-  338 (529)
                      .+-+.-+..-++.|++.|++..-  |-       ++..+++||.|-   |+.++.= |++++.          +=|||= 
T Consensus        38 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~  117 (279)
T PRK14178         38 PASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFH  117 (279)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCC
Confidence            34455566677889999998744  42       344446788775   3555422 333431          112332 


Q ss_pred             ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          339 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       339 ---------------sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                                     .-|++.|++=+     +-.-++|.|+|...  -+|+.+|..|.++|-.|++ .++.  +      
T Consensus       118 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~--~vGrpla~lL~~~~atVtv~hs~t--~------  187 (279)
T PRK14178        118 PLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSI--DVGRPMAALLLNADATVTICHSKT--E------  187 (279)
T ss_pred             hhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--cccHHHHHHHHhCCCeeEEEecCh--h------
Confidence                           24666666544     33578999999997  9999999999999999998 2111  1      


Q ss_pred             ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                  ++++  +++|++|  +|  +.++++..   ++|++++|++ ++.
T Consensus       188 ------------~L~~~~~~ADIvI~Avgk~~lv~~~~v---k~GavVIDVg-i~~  227 (279)
T PRK14178        188 ------------NLKAELRQADILVSAAGKAGFITPDMV---KPGATVIDVG-INQ  227 (279)
T ss_pred             ------------HHHHHHhhCCEEEECCCcccccCHHHc---CCCcEEEEee-ccc
Confidence                        1221  3566666  44  44676665   9999999999 665

>TIGR01746 Thioester-redct thioester reductase domain

Probab=93.30  E-value=0.13  Score=52.24  Aligned_cols=32  Identities=22%  Similarity=0.209  Sum_probs=26.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC--cEEEe--cchh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKD  388 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~  388 (529)
                      +|+|+||||  -||+.+++.|.++|  .+|..  |+.+
T Consensus         1 ~vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l~R~~~   36 (367)
T TIGR01746         1 TVLLTGATG--FLGAYLLEELLRRSTQAKVICLVRAAS   36 (367)
T ss_pred             CEEEeccch--HHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence            489999999  99999999999888  56665  6554

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=93.30  E-value=0.13  Score=50.62  Aligned_cols=44  Identities=16%  Similarity=0.251  Sum_probs=38.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.++.+  |+.++.+++.+++
T Consensus        10 ~~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l   55 (255)
T PRK06113         10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEI   55 (255)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence            457899999998  9999999999999999988  7778877776654

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.30  E-value=0.14  Score=52.38  Aligned_cols=92  Identities=15%  Similarity=0.214  Sum_probs=60.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc----------------cceeeec-cccc-
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ----------------HNLVLST-SYAA-  413 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~----------------~~l~~~~-~~~~-  413 (529)
                      ++|.++|+-   .+|+++|..|++.|.+|++  +++++.+++++++.....                ...+..+ ++++ 
T Consensus         2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~   78 (288)
T PRK09260          2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA   78 (288)
T ss_pred             cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence            479999995   9999999999999999999  888888887654221100                0112233 6653 


Q ss_pred             -CcceEEE--EcCcCChh-----h-hhcCCCCcee-ecccccCcc
Q 009674          414 -HKTKIWL--VGDDLTGK-----E-QARAPKGTIF-IPYTQIPPR  448 (529)
Q Consensus       414 -~~~~vwi--vg~~~~~~-----~-q~~a~~G~~f-~~~~~~~~~  448 (529)
                       ++++++|  +.+..+-+     + ...+++|+++ ++-|-++|.
T Consensus        79 ~~~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~~~~  123 (288)
T PRK09260         79 VADADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMSPT  123 (288)
T ss_pred             hcCCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCCHH
Confidence             7787766  33322211     1 1246889866 677778877

>PRK06484 short chain dehydrogenase; Validated

Probab=93.29  E-value=0.19  Score=54.86  Aligned_cols=46  Identities=13%  Similarity=0.143  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.++|+|+++  -||+++|+.|.++|.+|.+  |+.++++++.++++.
T Consensus         4 ~~k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   51 (520)
T PRK06484          4 QSRVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSLGP   51 (520)
T ss_pred             CCeEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            346889999997  9999999999999999988  899999988887754

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.29  E-value=0.2  Score=48.22  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=35.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      .+.++++|++|  .||+.+|+.|+++|.+|.+   |+.++.+++.+++
T Consensus         5 ~~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~   50 (247)
T PRK05565          5 GKVAIVTGASG--GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI   50 (247)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            35799999998  9999999999999999877   5566666665553

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.28  E-value=0.2  Score=52.46  Aligned_cols=160  Identities=24%  Similarity=0.290  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns  339 (529)
                      ++-+.-+..-++.|++.|++..  -|.       +++.++++|.|-   |+.++.= |++++.          +=|||=+
T Consensus        45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~  124 (301)
T PRK14194         45 PASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFH  124 (301)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccC
Confidence            3445556666778899998764  343       334446677764   3555421 222331          2244433


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                                      -|++.|++=+     +-.-++|.++|..|  -+|+.+|..|.++|..|++  +..+        
T Consensus       125 ~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~--ivG~PmA~~L~~~gatVtv~~~~t~--------  194 (301)
T PRK14194        125 SENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSN--IVGKPMAALLLQAHCSVTVVHSRST--------  194 (301)
T ss_pred             hhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEECCCCC--------
Confidence                            3666666544     33688999999998  9999999999999999999  2211        


Q ss_pred             Cccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCcc------CCCCCceeec-----C
Q 009674          397 IPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR------KLRKDCFYHS-----T  459 (529)
Q Consensus       397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~------~~R~dc~y~~-----~  459 (529)
                                   ++++  +.++|+|  +|+  .++++   ++++|+++||++ +++.      ++.-|+-|.+     .
T Consensus       195 -------------~l~e~~~~ADIVIsavg~~~~v~~~---~ik~GaiVIDvg-in~~~~~g~~kl~GDvdf~~~~~~a~  257 (301)
T PRK14194        195 -------------DAKALCRQADIVVAAVGRPRLIDAD---WLKPGAVVIDVG-INRIDDDGRSRLVGDVDFDSALPVVS  257 (301)
T ss_pred             -------------CHHHHHhcCCEEEEecCChhcccHh---hccCCcEEEEec-ccccCCCCCcceecccchHHHHhhcc
Confidence                         2222  3445544  443  34443   369999999999 5542      3346665422     1


Q ss_pred             CccccCCCCc
Q 009674          460 PAMIIPPSLS  469 (529)
Q Consensus       460 ~a~~~P~~~~  469 (529)
                      ..+.||+.+-
T Consensus       258 ~iTPVPGGVG  267 (301)
T PRK14194        258 AITPVPGGVG  267 (301)
T ss_pred             eecCCCCchh
Confidence            1244676543

>PRK06198 short chain dehydrogenase; Provisional

Probab=93.28  E-value=0.18  Score=49.42  Aligned_cols=43  Identities=14%  Similarity=0.191  Sum_probs=35.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+ |.+  |+.++.+.+.+++
T Consensus         6 ~k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l   51 (260)
T PRK06198          6 GKVALVTGGTQ--GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL   51 (260)
T ss_pred             CcEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence            46799999998  8999999999999999 777  7777666555543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=93.26  E-value=0.16  Score=50.15  Aligned_cols=31  Identities=16%  Similarity=0.298  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..+.|+++|+++  -||+++|+.|+++|.+|.+
T Consensus         7 ~~k~~lItGas~--gIG~aia~~l~~~G~~vv~   37 (251)
T PRK12481          7 NGKVAIITGCNT--GLGQGMAIGLAKAGADIVG   37 (251)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            346899999997  9999999999999999998

>PLN03139 formate dehydrogenase; Provisional

Probab=93.23  E-value=0.051  Score=58.59  Aligned_cols=154  Identities=17%  Similarity=0.149  Sum_probs=85.4

Q ss_pred             HHHcCCcEEEecccccc--cccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHH
Q 009674          296 ADAKGVKVISLGLLNQG--EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVAS  373 (529)
Q Consensus       296 A~k~G~kv~~LG~ln~~--e~ln~~g~~~~~k~p~~L~irvv~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~  373 (529)
                      |.++|+.|..-...|..  -|..-.--|...|+-......+..|.=-.......+..-..++|.++|. |  .||+++|+
T Consensus       140 a~~~gI~V~n~~g~na~sVAE~al~liL~l~R~~~~~~~~~~~g~W~~~~~~~~~~~L~gktVGIVG~-G--~IG~~vA~  216 (386)
T PLN03139        140 AAAAGLTVAEVTGSNVVSVAEDELMRILILLRNFLPGYHQVVSGEWNVAGIAYRAYDLEGKTVGTVGA-G--RIGRLLLQ  216 (386)
T ss_pred             HHHCCeEEEECCCcCcHHHHHHHHHHHHHHHcCcHHHHHHHHhCCCccccccCCCcCCCCCEEEEEee-c--HHHHHHHH
Confidence            55688888877665553  1121111233334411011122222211000011222335678999994 6  99999999


Q ss_pred             HHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------cCcCChhhhhcCCCCceeec
Q 009674          374 SLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------GDDLTGKEQARAPKGTIFIP  441 (529)
Q Consensus       374 ~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g~~~~~~~q~~a~~G~~f~~  441 (529)
                      .|..-|.+|..  ++..+-+ ..++.+..      ...++++  +.++++++        -..++.+...+|++|+.+|.
T Consensus       217 ~L~afG~~V~~~d~~~~~~~-~~~~~g~~------~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN  289 (386)
T PLN03139        217 RLKPFNCNLLYHDRLKMDPE-LEKETGAK------FEEDLDAMLPKCDVVVINTPLTEKTRGMFNKERIAKMKKGVLIVN  289 (386)
T ss_pred             HHHHCCCEEEEECCCCcchh-hHhhcCce------ecCCHHHHHhhCCEEEEeCCCCHHHHHHhCHHHHhhCCCCeEEEE
Confidence            99999999988  3221111 11111111      1235554  56766552        23356788899999999999


Q ss_pred             ccc---cCcc---------CCC---CCceeecC
Q 009674          442 YTQ---IPPR---------KLR---KDCFYHST  459 (529)
Q Consensus       442 ~~~---~~~~---------~~R---~dc~y~~~  459 (529)
                      ++|   ++.+         +++   -|++.++-
T Consensus       290 ~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EP  322 (386)
T PLN03139        290 NARGAIMDTQAVADACSSGHIGGYGGDVWYPQP  322 (386)
T ss_pred             CCCCchhhHHHHHHHHHcCCceEEEEcCCCCCC
Confidence            999   4433         444   68887774

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.23  E-value=0.18  Score=52.41  Aligned_cols=146  Identities=27%  Similarity=0.328  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 009674          284 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS-  339 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns-  339 (529)
                      +-+.-+...++.|++.|++..-.  .       .+..+++||.|.   |+.++.= |++++.          +=|||=+ 
T Consensus        45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~  124 (285)
T PRK14189         45 ASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHV  124 (285)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCCh
Confidence            34444666777899999887543  2       233346788874   2554422 333441          2245543 


Q ss_pred             ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 009674          340 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP  398 (529)
Q Consensus       340 ---------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~  398 (529)
                                     -|+..|++=+     +-..++|.|+|.++  -||+-+|..|.++|..|++ .++           
T Consensus       125 ~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVt~~hs~-----------  191 (285)
T PRK14189        125 ANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSN--IVGKPMAMLLLQAGATVTICHSK-----------  191 (285)
T ss_pred             hhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEecCC-----------
Confidence                           2666666543     44688999999997  8899999999999999998 111           


Q ss_pred             cccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674          399 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  455 (529)
Q Consensus       399 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  455 (529)
                               ..++++  +++|++|  +|  ..++++.   .++|+++||+. +++.   ++--|+-
T Consensus       192 ---------t~~l~~~~~~ADIVV~avG~~~~i~~~~---ik~gavVIDVG-in~~~~gkl~GDVd  244 (285)
T PRK14189        192 ---------TRDLAAHTRQADIVVAAVGKRNVLTADM---VKPGATVIDVG-MNRDDAGKLCGDVD  244 (285)
T ss_pred             ---------CCCHHHHhhhCCEEEEcCCCcCccCHHH---cCCCCEEEEcc-ccccCCCCeeCCcc
Confidence                     012332  3555655  33  2456644   49999999998 6652   3445554

>PRK08264 short chain dehydrogenase; Validated

Probab=93.22  E-value=0.11  Score=50.11  Aligned_cols=38  Identities=21%  Similarity=0.211  Sum_probs=32.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEK  392 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~  392 (529)
                      .+.|+++|++|  .||+++|+.|+++|. +|++  |+.++.++
T Consensus         6 ~~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~   46 (238)
T PRK08264          6 GKVVLVTGANR--GIGRAFVEQLLARGAAKVYAAARDPESVTD   46 (238)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCcccEEEEecChhhhhh
Confidence            46799999998  999999999999998 8888  76666543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.19  E-value=0.17  Score=50.32  Aligned_cols=44  Identities=16%  Similarity=0.137  Sum_probs=32.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~~  397 (529)
                      +.++++|+++++-||+|+|+.|+++|.+|.+  |+.   +..++++++.
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~   57 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI   57 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc
Confidence            5789999995335999999999999999988  552   2344454443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=93.14  E-value=0.34  Score=52.04  Aligned_cols=85  Identities=18%  Similarity=0.210  Sum_probs=57.3

Q ss_pred             HHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHH----------HHHHhcCcCCCcEEEEecccCchh
Q 009674          297 DAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAA----------AVVVNSLPKTTAHVLLRGTVTANK  366 (529)
Q Consensus       297 ~k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnslta----------avv~~~i~~~~~~V~~~Gatg~~k  366 (529)
                      .+.|+.|+++-  .       +|. .+  .|. -+.++-.|..+.+          ...+...+...++|+++|. |  +
T Consensus       178 ~~~~~~vi~i~--r-------~~~-~~--~p~-~~~~l~~gD~l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~-G--~  241 (453)
T PRK09496        178 PDIDVRVVAIF--R-------GGR-LI--IPR-GDTVIEAGDEVYFIGAREHIRAVMSEFGRLEKPVKRVMIVGG-G--N  241 (453)
T ss_pred             CCCceEEEEEE--E-------CCE-EE--cCC-CCcEecCCCEEEEEeCHHHHHHHHHHhCccCCCCCEEEEECC-C--H
Confidence            35788888773  2       222 11  244 4444444444432          2223333335789999999 5  9


Q ss_pred             hHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          367 VANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       367 ig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +|+.+++.|.++|.++++  +++++.++++++.
T Consensus       242 ~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~  274 (453)
T PRK09496        242 IGYYLAKLLEKEGYSVKLIERDPERAEELAEEL  274 (453)
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence            999999999999999988  8888999888764

>PLN02214 cinnamoyl-CoA reductase

Probab=93.09  E-value=0.23  Score=51.82  Aligned_cols=35  Identities=23%  Similarity=0.209  Sum_probs=30.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      .++|+|+|++|  -||+++++.|.++|.+|..  |+.++
T Consensus        10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214         10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            45799999999  9999999999999999987  66554

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.06  E-value=0.14  Score=50.99  Aligned_cols=46  Identities=17%  Similarity=0.277  Sum_probs=35.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-----~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|+++++-||+|+|+.|+++|.+|.+     |++++++++.++++
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~   56 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG   56 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC
Confidence            46799999753247999999999999999987     33566666666553

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=93.06  E-value=0.13  Score=50.84  Aligned_cols=43  Identities=19%  Similarity=0.255  Sum_probs=37.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhHHHHHhhCcc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~----~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .|+++|+++  -||+++|+.|++    .|.+|.+  |++++.+++++++..
T Consensus         2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~   50 (256)
T TIGR01500         2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGA   50 (256)
T ss_pred             EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHh
Confidence            588999997  999999999996    7999888  899999888877643

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=93.05  E-value=0.18  Score=50.18  Aligned_cols=32  Identities=19%  Similarity=0.317  Sum_probs=27.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~   37 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGI   37 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence            46789999973248999999999999999987

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.04  E-value=0.16  Score=51.18  Aligned_cols=35  Identities=20%  Similarity=0.258  Sum_probs=29.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  387 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~  387 (529)
                      .+.++++|+++++-||+++|+.|+++|.+|.+  |++
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~   43 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE   43 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence            46799999994236999999999999999998  554

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=93.03  E-value=0.21  Score=49.23  Aligned_cols=43  Identities=19%  Similarity=0.195  Sum_probs=34.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~  397 (529)
                      .+.++++|++|  -||+++|+.|+++|.++.+  | +++..+++.+++
T Consensus         7 ~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l   52 (261)
T PRK08936          7 GKVVVITGGST--GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI   52 (261)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999987  4 445555555554

>PRK06841 short chain dehydrogenase; Provisional

Probab=93.01  E-value=0.17  Score=49.45  Aligned_cols=36  Identities=19%  Similarity=0.306  Sum_probs=31.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      ..+.|+++|++|  .||+++|+.|+++|.+|.+  |+.+.
T Consensus        14 ~~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~~~~   51 (255)
T PRK06841         14 SGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSEDV   51 (255)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            356899999998  9999999999999999998  66553

>PRK07201 short chain dehydrogenase; Provisional

Probab=92.97  E-value=0.18  Score=56.63  Aligned_cols=43  Identities=21%  Similarity=0.278  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus       371 ~k~vlItGas~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~  415 (657)
T PRK07201        371 GKVVLITGASS--GIGRATAIKVAEAGATVFLVARNGEALDELVAEI  415 (657)
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  8888888887765

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.96  E-value=0.23  Score=49.33  Aligned_cols=45  Identities=22%  Similarity=0.305  Sum_probs=35.8

Q ss_pred             CcEEEEecc--cCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCcc
Q 009674          353 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Ga--tg~~kig~ava~~L~~~~~~v~l--~~~--~~~~~l~~~~~~  399 (529)
                      .+.|+++|+  ++  -||+++|+.|+++|.+|.+  |++  +..++++++++.
T Consensus         7 ~k~~lItGa~~s~--GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~   57 (256)
T PRK07889          7 GKRILVTGVITDS--SIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE   57 (256)
T ss_pred             CCEEEEeCCCCcc--hHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC
Confidence            357899999  54  8999999999999999998  443  556777776643

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.94  E-value=0.23  Score=50.81  Aligned_cols=44  Identities=18%  Similarity=0.247  Sum_probs=35.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~  397 (529)
                      +.+.++|+|++|  -||+++|+.|+++|.+|.+  + +.++.+++.+++
T Consensus        11 ~~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i   57 (306)
T PRK07792         11 SGKVAVVTGAAA--GLGRAEALGLARLGATVVVNDVASALDASDVLDEI   57 (306)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH
Confidence            456899999998  9999999999999999998  3 345566666554

>PLN02494 adenosylhomocysteinase

Probab=92.93  E-value=0.77  Score=50.89  Aligned_cols=156  Identities=15%  Similarity=0.133  Sum_probs=97.0

Q ss_pred             eeeecCChhHHHHHHhcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 009674          332 IKVVDGSSLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL  407 (529)
Q Consensus       332 irvv~Gnsltaavv~~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~  407 (529)
                      -|.=||.|. .-.+++....  .-++|.|+|.-   +||+.+|+.|...|.+|+.  ++..+...-... +.+       
T Consensus       232 n~yGtgqS~-~d~i~r~t~i~LaGKtVvViGyG---~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~-G~~-------  299 (477)
T PLN02494        232 NLYGCRHSL-PDGLMRATDVMIAGKVAVICGYG---DVGKGCAAAMKAAGARVIVTEIDPICALQALME-GYQ-------  299 (477)
T ss_pred             ccccccccH-HHHHHHhcCCccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhc-CCe-------
Confidence            455567775 3344444332  56789999987   9999999999999999998  454443221111 111       


Q ss_pred             eccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---------------CCCCCceeecCC----cc
Q 009674          408 STSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---------------KLRKDCFYHSTP----AM  462 (529)
Q Consensus       408 ~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---------------~~R~dc~y~~~~----a~  462 (529)
                      +.++++  +.++++|  .|  ..+..+....+++|++++-+++++++               +.|..+..-+.+    .+
T Consensus       300 vv~leEal~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i  379 (477)
T PLN02494        300 VLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGI  379 (477)
T ss_pred             eccHHHHHhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEE
Confidence            112332  4566666  33  23578899999999999999985422               222222211211    12


Q ss_pred             c--cCCCCccccccccccCcchhHHHHHhhHhhhhcCCCC
Q 009674          463 I--IPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL  500 (529)
Q Consensus       463 ~--~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEgw~~  500 (529)
                      .  --+.+-|+- |-.+.|..+|.-.++--.+-..|-|..
T Consensus       380 ~ll~eGrlvNl~-~~~GhP~evmd~sFa~Q~la~~~l~~~  418 (477)
T PLN02494        380 IVLAEGRLMNLG-CATGHPSFVMSCSFTNQVIAQLELWNE  418 (477)
T ss_pred             EEEeCCcccccc-CCCCCCcceeeHHHHHHHHHHHHHHhc
Confidence            1  222466687 889999999999887766655555544

>PRK07023 short chain dehydrogenase; Provisional

Probab=92.92  E-value=0.2  Score=48.69  Aligned_cols=33  Identities=24%  Similarity=0.336  Sum_probs=29.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      ..|+++|++|  -||+++|+.|+++|.+|++  |+.+
T Consensus         2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~r~~~   36 (243)
T PRK07023          2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVARSRH   36 (243)
T ss_pred             ceEEEecCCc--chHHHHHHHHHhCCCEEEEEecCcc
Confidence            3689999998  9999999999999999988  6544

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=92.91  E-value=0.15  Score=52.94  Aligned_cols=47  Identities=13%  Similarity=0.199  Sum_probs=38.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~  398 (529)
                      ..+.++++|+.+.+-||+|+|+.|++.|-+|.+ |+.++++.++.++.
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~   55 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLR   55 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhh
Confidence            456899999931148999999999999999999 88899988876654

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=92.89  E-value=0.58  Score=45.75  Aligned_cols=84  Identities=13%  Similarity=0.144  Sum_probs=58.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCcceEEE---EcCcCC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT  426 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi---vg~~~~  426 (529)
                      ..++|.+.|..   ++|+++|+.|.+.|.+|+.  ++.++.++++++...+.    +...++-+.+++|.+   .|..|+
T Consensus        27 ~gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~----v~~~~l~~~~~Dv~vp~A~~~~I~   99 (200)
T cd01075          27 EGKTVAVQGLG---KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV----VAPEEIYSVDADVFAPCALGGVIN   99 (200)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE----EcchhhccccCCEEEecccccccC
Confidence            45789999994   9999999999999999999  77788888877653211    111111114677766   567899


Q ss_pred             hhhhhcCCCCceeeccc
Q 009674          427 GKEQARAPKGTIFIPYT  443 (529)
Q Consensus       427 ~~~q~~a~~G~~f~~~~  443 (529)
                      .+...+++.. .++.-+
T Consensus       100 ~~~~~~l~~~-~v~~~A  115 (200)
T cd01075         100 DDTIPQLKAK-AIAGAA  115 (200)
T ss_pred             HHHHHHcCCC-EEEECC
Confidence            9888777644 344443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.86  E-value=0.19  Score=52.18  Aligned_cols=161  Identities=19%  Similarity=0.195  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns  339 (529)
                      .+-+.-+..-.+.|++.|++.  .-|.       +++.+++||.|-   ++.++.= |++++.          +=|||=+
T Consensus        44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~  123 (284)
T PRK14193         44 PGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLH  123 (284)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCC
Confidence            344555667778899999986  4444       333446788774   3555422 332331          2244432


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhc--cCcEEEe-cchhhHHHHHh
Q 009674          340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT-ICKDDYEKLKL  395 (529)
Q Consensus       340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~--~~~~v~l-~~~~~~~~l~~  395 (529)
                                      -|+..|++=+     +-.-++|+|+|.+.  -||+-+|..|.+  ++..|++ .++        
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~~~atVtvchs~--------  193 (284)
T PRK14193        124 PTNLGRLVLNEPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGV--TVGRPIGLLLTRRSENATVTLCHTG--------  193 (284)
T ss_pred             hhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHhhccCCCEEEEeCCC--------
Confidence                            3666666544     44678999999998  999999999997  7888988 221        


Q ss_pred             hCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce----eecCCcc
Q 009674          396 RIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF----YHSTPAM  462 (529)
Q Consensus       396 ~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~----y~~~~a~  462 (529)
                                  ..++++  +.+||+|  +|  +.++++..   ++|+++||+. +++.   ++.-|+-    ..-...+
T Consensus       194 ------------T~~l~~~~k~ADIvV~AvGkp~~i~~~~i---k~GavVIDvG-in~~~~gkl~GDvd~~v~~~a~~iT  257 (284)
T PRK14193        194 ------------TRDLAAHTRRADIIVAAAGVAHLVTADMV---KPGAAVLDVG-VSRAGDGKLVGDVHPDVWEVAGAVS  257 (284)
T ss_pred             ------------CCCHHHHHHhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-ccccCCCcEEeecCHhHHhhCCEEe
Confidence                        012332  3566655  34  35777777   9999999998 6662   3334444    2222335


Q ss_pred             ccCCCCc
Q 009674          463 IIPPSLS  469 (529)
Q Consensus       463 ~~P~~~~  469 (529)
                      .||+.+-
T Consensus       258 PVPGGVG  264 (284)
T PRK14193        258 PNPGGVG  264 (284)
T ss_pred             CCCCChh
Confidence            5777654

>PRK07069 short chain dehydrogenase; Validated

Probab=92.82  E-value=0.13  Score=49.87  Aligned_cols=41  Identities=20%  Similarity=0.331  Sum_probs=35.2

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCc
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIP  398 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~~~  398 (529)
                      |+++|++|  -||+++|+.|+++|.+|.+  |+ .++++.+++++.
T Consensus         2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~   45 (251)
T PRK07069          2 AFITGAAG--GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEIN   45 (251)
T ss_pred             EEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH
Confidence            79999998  9999999999999999988  66 677777776654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.80  E-value=0.17  Score=50.33  Aligned_cols=46  Identities=17%  Similarity=0.232  Sum_probs=36.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c---chhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---CKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~---~~~~~~~l~~~~~  398 (529)
                      .+.++++|+++.+-||+++|+.|+++|.+|.+  |   ++++++++++++.
T Consensus         7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~   57 (257)
T PRK08594          7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE   57 (257)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC
Confidence            46789999971027999999999999999998  3   3467788877764

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=92.79  E-value=0.13  Score=53.01  Aligned_cols=102  Identities=15%  Similarity=0.170  Sum_probs=68.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCc----
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD----  424 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~----  424 (529)
                      +|.++|.-   .+|.++|+.|.+.|.+|.+  |++++.++++++- ..      ...+.++  ++++++|  +-+.    
T Consensus         3 ~Ig~IGlG---~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-~~------~~~s~~~~~~~aDvVi~~vp~~~~~~   72 (296)
T PRK15461          3 AIAFIGLG---QMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-AT------PAASPAQAAAGAEFVITMLPNGDLVR   72 (296)
T ss_pred             eEEEEeeC---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-Cc------ccCCHHHHHhcCCEEEEecCCHHHHH
Confidence            68889866   9999999999999999988  8888888887651 10      1223332  5555544  2111    


Q ss_pred             --CChh-h-hhcCCCCceeecccccCccCC--------CCCceeecCCccccCC
Q 009674          425 --LTGK-E-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMIIPP  466 (529)
Q Consensus       425 --~~~~-~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~~P~  466 (529)
                        +... . ...+++|+++++.|.++|...        .+.+.|.+.|.+..|.
T Consensus        73 ~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~  126 (296)
T PRK15461         73 SVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSD  126 (296)
T ss_pred             HHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHH
Confidence              1111 1 123589999999999988722        1567788888877655

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=92.79  E-value=0.24  Score=50.76  Aligned_cols=45  Identities=20%  Similarity=0.279  Sum_probs=39.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.++++|++.  -||+|+|+.|++.|-+|.+  |+++++++.++++.
T Consensus         7 ~gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~   53 (270)
T KOG0725|consen    7 AGKVALVTGGSS--GIGKAIALLLAKAGAKVVITGRSEERLEETAQELG   53 (270)
T ss_pred             CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            356788999996  8999999999999999999  99999888877733

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=92.78  E-value=0.2  Score=51.06  Aligned_cols=39  Identities=18%  Similarity=0.129  Sum_probs=32.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  393 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l  393 (529)
                      .+.|+|+|++|  -||+++++.|.++|.+|.+  |+.++.++.
T Consensus         5 ~k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~   45 (325)
T PLN02989          5 GKVVCVTGASG--YIASWIVKLLLFRGYTINATVRDPKDRKKT   45 (325)
T ss_pred             CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCCcchhhH
Confidence            36899999999  9999999999999999876  666554443

>PRK08219 short chain dehydrogenase; Provisional

Probab=92.73  E-value=0.16  Score=48.39  Aligned_cols=41  Identities=15%  Similarity=0.243  Sum_probs=34.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.|+|+|++|  .||+++|+.|+++ .+|..  |+.++.++++++.
T Consensus         4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~   46 (227)
T PRK08219          4 PTALITGASR--GIGAAIARELAPT-HTLLLGGRPAERLDELAAEL   46 (227)
T ss_pred             CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh
Confidence            5799999998  9999999999988 88877  8888877776553

>PRK06114 short chain dehydrogenase; Provisional

Probab=92.72  E-value=0.29  Score=48.11  Aligned_cols=44  Identities=20%  Similarity=0.279  Sum_probs=34.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~  397 (529)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+  |+. +.++++.+++
T Consensus         7 ~~k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l   53 (254)
T PRK06114          7 DGQVAFVTGAGS--GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI   53 (254)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence            346899999998  9999999999999999998  543 3455555443

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=92.69  E-value=0.25  Score=41.57  Aligned_cols=58  Identities=16%  Similarity=0.225  Sum_probs=44.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC---cEEEe---cchhhHHHHHhhCccccccceeeec-cccc--CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwiv  421 (529)
                      +|.++|+-   ++|.|+++.|.+.|   .++.+   |++|+.++++++.+.+.      .. +.++  ++++++|+
T Consensus         1 kI~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~advvil   67 (96)
T PF03807_consen    1 KIGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQA------TADDNEEAAQEADVVIL   67 (96)
T ss_dssp             EEEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEE------ESEEHHHHHHHTSEEEE
T ss_pred             CEEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccc------ccCChHHhhccCCEEEE
Confidence            46777665   99999999999999   88885   99999999999977443      22 3443  66777663

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=92.62  E-value=0.78  Score=45.91  Aligned_cols=78  Identities=17%  Similarity=0.143  Sum_probs=48.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEE-e--c----------chhhHHHHHhhCccccccceeeeccc--cc---
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA-T--I----------CKDDYEKLKLRIPVEAQHNLVLSTSY--AA---  413 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~-l--~----------~~~~~~~l~~~~~~~~~~~l~~~~~~--~~---  413 (529)
                      ..++|++.| .|  +||+.+|+.|.+.|.+|+ +  .          +.+++.+++++-..-.  ++-..+.+  ++   
T Consensus        30 ~~~~v~I~G-~G--~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~--~~~~~~~~~~~~i~~  104 (227)
T cd01076          30 AGARVAIQG-FG--NVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVL--GFPGAERITNEELLE  104 (227)
T ss_pred             cCCEEEEEC-CC--HHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcc--cCCCceecCCcccee
Confidence            467999999 46  999999999999999999 5  2          4455555555421100  00000111  11   


Q ss_pred             CcceEEE---EcCcCChhhhhcCC
Q 009674          414 HKTKIWL---VGDDLTGKEQARAP  434 (529)
Q Consensus       414 ~~~~vwi---vg~~~~~~~q~~a~  434 (529)
                      .+|||.|   .++.|+++...+.+
T Consensus       105 ~~~Dvlip~a~~~~i~~~~~~~l~  128 (227)
T cd01076         105 LDCDILIPAALENQITADNADRIK  128 (227)
T ss_pred             ecccEEEecCccCccCHHHHhhce
Confidence            4667766   56777776665444

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK06179 short chain dehydrogenase; Provisional

Probab=92.61  E-value=0.14  Score=50.60  Aligned_cols=36  Identities=19%  Similarity=0.235  Sum_probs=31.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+
T Consensus         5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~   42 (270)
T PRK06179          5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSRNPARAA   42 (270)
T ss_pred             CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCChhhcc
Confidence            5799999998  9999999999999999998  6655443

>TIGR00936 ahcY adenosylhomocysteinase

Probab=92.57  E-value=0.47  Score=51.60  Aligned_cols=157  Identities=13%  Similarity=0.099  Sum_probs=93.0

Q ss_pred             ceeeecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee
Q 009674          331 KIKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV  406 (529)
Q Consensus       331 ~irvv~Gnsltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~  406 (529)
                      +-|.=+|.|.. -.+.+..  ....++|+|+|.-   .||+.+|+.|...|.+|+.  +++.+.......   +.     
T Consensus       172 Dn~yg~g~s~~-~~i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~---G~-----  239 (406)
T TIGR00936       172 DNRYGTGQSTI-DGILRATNLLIAGKTVVVAGYG---WCGKGIAMRARGMGARVIVTEVDPIRALEAAMD---GF-----  239 (406)
T ss_pred             hcccccchhHH-HHHHHhcCCCCCcCEEEEECCC---HHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhc---CC-----
Confidence            34566777744 3345443  3456799999976   9999999999999999988  455543222211   11     


Q ss_pred             eeccccc--CcceEEEE----cCcCChhhhhcCCCCceeecccccCcc--------------CCCCCce---eecCCcc-
Q 009674          407 LSTSYAA--HKTKIWLV----GDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCF---YHSTPAM-  462 (529)
Q Consensus       407 ~~~~~~~--~~~~vwiv----g~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~---y~~~~a~-  462 (529)
                      ++.++++  +.++++|.    -+.++.+....+++|++++-+.+++.+              +.|.-..   .+++-.+ 
T Consensus       240 ~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~  319 (406)
T TIGR00936       240 RVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIY  319 (406)
T ss_pred             EeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEE
Confidence            1223332  56677662    234566677899999999998886541              2231111   1111111 


Q ss_pred             cc-CCCCccccccccccCcchhHHHHHhhHhhhhcCCCC
Q 009674          463 II-PPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL  500 (529)
Q Consensus       463 ~~-P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEgw~~  500 (529)
                      .+ -+..-|+- |..+.|..+|.--+|-=.+-+++=|.+
T Consensus       320 ll~~GrlvNl~-~~~ghp~~vmd~sfa~q~la~~~l~~~  357 (406)
T TIGR00936       320 LLAEGRLVNLA-AAEGHPSEVMDMSFANQALAAEYLWKN  357 (406)
T ss_pred             EEeCCceeccc-CCCCCcceeeCHHHHHHHHHHHHHHhc
Confidence            11 11355566 888899999976665444444444443

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.55  E-value=0.19  Score=49.34  Aligned_cols=41  Identities=22%  Similarity=0.361  Sum_probs=33.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL  395 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~  395 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+   ++++..+++++
T Consensus         7 ~k~~lItGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~   50 (255)
T PRK06463          7 GKVALITGGTR--GIGRAIAEAFLREGAKVAVLYNSAENEAKELRE   50 (255)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh
Confidence            46899999998  9999999999999999987   34455555654

>PRK05855 short chain dehydrogenase; Validated

Probab=92.54  E-value=0.25  Score=53.88  Aligned_cols=44  Identities=18%  Similarity=0.214  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ...++|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus       315 ~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~  360 (582)
T PRK05855        315 GKLVVVTGAGS--GIGRETALAFAREGAEVVASDIDEAAAERTAELIR  360 (582)
T ss_pred             CCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46789999998  9999999999999999988  88888888777653

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=92.49  E-value=0.15  Score=46.77  Aligned_cols=66  Identities=17%  Similarity=0.223  Sum_probs=43.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE---cCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV---GDD  424 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv---g~~  424 (529)
                      +-+|-++|+ |  |+|.+++++|.+.|..|.-   |+.+.-++++.+++...      +.++++  .+++++++   ||.
T Consensus        10 ~l~I~iIGa-G--rVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~------~~~~~~~~~~aDlv~iavpDda   80 (127)
T PF10727_consen   10 RLKIGIIGA-G--RVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGA------ILDLEEILRDADLVFIAVPDDA   80 (127)
T ss_dssp             --EEEEECT-S--CCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CCH
T ss_pred             ccEEEEECC-C--HHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccc------ccccccccccCCEEEEEechHH
Confidence            457899999 4  9999999999999998876   77778888888777655      445554  67788664   555


Q ss_pred             CCh
Q 009674          425 LTG  427 (529)
Q Consensus       425 ~~~  427 (529)
                      |.+
T Consensus        81 I~~   83 (127)
T PF10727_consen   81 IAE   83 (127)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=92.46  E-value=0.22  Score=48.09  Aligned_cols=40  Identities=25%  Similarity=0.394  Sum_probs=32.0

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      |+++|++|  -||+++|+.|+++|.+|.+   +++++.+.+.+++
T Consensus         1 vlItGas~--giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l   43 (239)
T TIGR01831         1 VLVTGASR--GIGRAIANRLAADGFEICVHYHSGRSDAESVVSAI   43 (239)
T ss_pred             CEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            58999998  9999999999999999877   3445566555554

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=92.45  E-value=0.22  Score=47.03  Aligned_cols=92  Identities=16%  Similarity=0.163  Sum_probs=58.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccc----ee-----------eeccc----
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN----LV-----------LSTSY----  411 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~----l~-----------~~~~~----  411 (529)
                      .++|+|+|+-   .+|...++.|.+.|.+|+.  .+.++.++++..-.......    +.           ....+    
T Consensus        20 p~~vvv~G~G---~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f   96 (168)
T PF01262_consen   20 PAKVVVTGAG---RVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF   96 (168)
T ss_dssp             T-EEEEESTS---HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred             CeEEEEECCC---HHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence            4688888865   9999999999999999999  55556665554422211110    00           01122    


Q ss_pred             cc--CcceEEE---------EcCcCChhhhhcCCCCceeecccccCcc
Q 009674          412 AA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       412 ~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      .+  +.++++|         .-..++.++.++++||.+++|+| .+.-
T Consensus        97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis-~D~g  143 (168)
T PF01262_consen   97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS-CDQG  143 (168)
T ss_dssp             HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT-GGGT
T ss_pred             HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE-ecCC
Confidence            22  4556766         33578999999999999999999 6655

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=92.42  E-value=0.27  Score=48.29  Aligned_cols=42  Identities=14%  Similarity=0.192  Sum_probs=33.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++ ..+++.+++
T Consensus         8 ~k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~   51 (260)
T PRK12823          8 GKVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDRSE-LVHEVAAEL   51 (260)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHH
Confidence            46799999998  9999999999999999988  553 344554443

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.39  E-value=0.26  Score=51.13  Aligned_cols=149  Identities=21%  Similarity=0.264  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns  339 (529)
                      ++-+.-+....+.|++.|++..  -|.       +++.++++|.|-   ++.++.= |++++.          +=|||=|
T Consensus        43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~  122 (285)
T PRK14191         43 PASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFH  122 (285)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence            3444556667778899998764  344       233347788763   2555422 332431          2245543


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                                      -|++.|++=+     +-.-++|+|+|...  -||+-+|..|.++|-.|++ .++.  ++|++. 
T Consensus       123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~--~VG~Pla~lL~~~gAtVtv~hs~t--~~l~~~-  197 (285)
T PRK14191        123 PLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASN--IVGKPLAMLMLNAGASVSVCHILT--KDLSFY-  197 (285)
T ss_pred             hhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCEEEEEeCCc--HHHHHH-
Confidence                            4666666544     44678999999997  9999999999999999999 2111  111110 


Q ss_pred             ccccccceeeecccccCcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674          398 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  455 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  455 (529)
                         .            +.++|+|  +|  +.++++..   ++|+++||+. +++.   ++--|+-
T Consensus       198 ---~------------~~ADIvV~AvG~p~~i~~~~v---k~GavVIDvG-i~~~~~gklvGDvd  243 (285)
T PRK14191        198 ---T------------QNADIVCVGVGKPDLIKASMV---KKGAVVVDIG-INRLNDGRLVGDVD  243 (285)
T ss_pred             ---H------------HhCCEEEEecCCCCcCCHHHc---CCCcEEEEee-cccccCCceecccc
Confidence               0            2455655  33  34676666   9999999998 6552   3445554

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.35  E-value=0.25  Score=51.25  Aligned_cols=160  Identities=18%  Similarity=0.223  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce------------------
Q 009674          284 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------  332 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------  332 (529)
                      +-+.-+...++.|++.|++..-.=         +++.++++|.|-   |+.++.= |++++.                  
T Consensus        43 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~  122 (282)
T PRK14182         43 ASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHP  122 (282)
T ss_pred             HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCH
Confidence            344446667788999999875432         333346788874   3555522 333441                  


Q ss_pred             ----eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          333 ----KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       333 ----rvv~Gn-----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                          |+..|+     .-|++.|++=+     +-.-++|+++|...  -||+-+|..|.++|-.|++ .++-  .      
T Consensus       123 ~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~AtVtichs~T--~------  192 (282)
T PRK14182        123 FNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSN--IVGKPMAMMLLERHATVTIAHSRT--A------  192 (282)
T ss_pred             hHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--C------
Confidence                222232     23666666544     44688999999997  9999999999999999998 2110  1      


Q ss_pred             ccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCcc---CCCCCceeec-----CCccc
Q 009674          398 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMI  463 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~  463 (529)
                                  ++++  +.+||+|  +|+  .++++..   ++|++++|+. +.+.   ++.-|+-+.+     ...+.
T Consensus       193 ------------nl~~~~~~ADIvI~AvGk~~~i~~~~i---k~gaiVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTP  256 (282)
T PRK14182        193 ------------DLAGEVGRADILVAAIGKAELVKGAWV---KEGAVVIDVG-MNRLADGKLVGDVEFAAAAARASAITP  256 (282)
T ss_pred             ------------CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEee-ceecCCCCeeCCCCHHHHHhhccEecC
Confidence                        2222  3566666  342  4666666   9999999998 6662   4446654322     22245


Q ss_pred             cCCCCc
Q 009674          464 IPPSLS  469 (529)
Q Consensus       464 ~P~~~~  469 (529)
                      ||+.+-
T Consensus       257 VPGGVG  262 (282)
T PRK14182        257 VPGGVG  262 (282)
T ss_pred             CCCCCh
Confidence            666543

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.34  E-value=0.22  Score=51.88  Aligned_cols=138  Identities=21%  Similarity=0.258  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 009674          284 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------  332 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------  332 (529)
                      +-+.-+...++.|++.|++.--  |.       ++..+++||.|-   ++.++.= |++++.                  
T Consensus        45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~  124 (294)
T PRK14187         45 ASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHN  124 (294)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCh
Confidence            3444456667789999988654  42       233346778874   3555522 332431                  


Q ss_pred             ----eeecCC---hh---HHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674          333 ----KVVDGS---SL---AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  396 (529)
Q Consensus       333 ----rvv~Gn---sl---taavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~  396 (529)
                          |+..|+   .+   |++.|++=+     +-.-++|+|+|.+.  -||+-+|..|.++|-.|++ .++-        
T Consensus       125 ~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVt~chs~T--------  194 (294)
T PRK14187        125 ENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSN--IVGKPMACLLLGENCTVTTVHSAT--------  194 (294)
T ss_pred             hhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhhCCCEEEEeCCCC--------
Confidence                233444   22   777766644     44688999999997  9999999999999999999 2110        


Q ss_pred             Cccccccceeeeccccc--CcceEEE--EcCc--CChhhhhcCCCCceeecccccCc
Q 009674          397 IPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                  .++++  +++||+|  +|+-  ++++..   ++|+++||+- +.+
T Consensus       195 ------------~~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gaiVIDVG-in~  235 (294)
T PRK14187        195 ------------RDLADYCSKADILVAAVGIPNFVKYSWI---KKGAIVIDVG-INS  235 (294)
T ss_pred             ------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence                        12332  3566655  5544  787777   8999999996 554

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.31  E-value=0.28  Score=50.07  Aligned_cols=39  Identities=21%  Similarity=0.185  Sum_probs=34.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ++|.++|+-   .+|+++|..|++.|.+|++  +++++.+++++
T Consensus         5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (292)
T PRK07530          5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLA   45 (292)
T ss_pred             CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            579999996   9999999999999999999  88888877554

>PRK12747 short chain dehydrogenase; Provisional

Probab=92.31  E-value=0.19  Score=49.14  Aligned_cols=43  Identities=26%  Similarity=0.292  Sum_probs=35.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+   +++++.+++..++
T Consensus         4 ~k~~lItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~   49 (252)
T PRK12747          4 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI   49 (252)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence            35899999998  9999999999999999987   4556666665554

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.27  E-value=0.26  Score=51.19  Aligned_cols=148  Identities=21%  Similarity=0.256  Sum_probs=95.5

Q ss_pred             hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 009674          282 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS  338 (529)
Q Consensus       282 ~~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn  338 (529)
                      ..+-+.-+...++.|++.|++..-  |.       +++.+++||.|-   |+.++.= |++++.          +=|||=
T Consensus        42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl  121 (284)
T PRK14170         42 NQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGF  121 (284)
T ss_pred             CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccC
Confidence            344555566778889999998653  44       334447788874   3555422 222331          224444


Q ss_pred             h----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674          339 S----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  396 (529)
Q Consensus       339 s----------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~  396 (529)
                      |                -|++.|++=+.     -.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-        
T Consensus       122 ~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVtichs~T--------  191 (284)
T PRK14170        122 HPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSN--IVGKPVAQLLLNENATVTIAHSRT--------  191 (284)
T ss_pred             ChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence            3                36677666543     3688999999998  9999999999999999998 2111        


Q ss_pred             Cccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674          397 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  455 (529)
Q Consensus       397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  455 (529)
                                  .++++  +++||+|  +|  ..++++..   ++|+++||+. ++..   ++--|+-
T Consensus       192 ------------~~l~~~~~~ADIvI~AvG~~~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDvd  243 (284)
T PRK14170        192 ------------KDLPQVAKEADILVVATGLAKFVKKDYI---KPGAIVIDVG-MDRDENNKLCGDVD  243 (284)
T ss_pred             ------------CCHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-CcccCCCCeecccc
Confidence                        12332  3566666  33  35777776   8999999998 6652   3444544

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=92.22  E-value=0.29  Score=50.98  Aligned_cols=31  Identities=13%  Similarity=0.174  Sum_probs=28.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..++|+|+|+||  =||+.+++.|.++|.+|+.
T Consensus        14 ~~~~vlVtGatG--fiG~~lv~~L~~~g~~V~~   44 (348)
T PRK15181         14 APKRWLITGVAG--FIGSGLLEELLFLNQTVIG   44 (348)
T ss_pred             cCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence            457899999999  9999999999999999876

>PRK12744 short chain dehydrogenase; Provisional

Probab=92.20  E-value=0.19  Score=49.45  Aligned_cols=30  Identities=23%  Similarity=0.368  Sum_probs=26.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         8 ~k~vlItGa~~--gIG~~~a~~l~~~G~~vv~   37 (257)
T PRK12744          8 GKVVLIAGGAK--NLGGLIARDLAAQGAKAVA   37 (257)
T ss_pred             CcEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence            36899999998  9999999999999999554

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=92.17  E-value=0.31  Score=46.93  Aligned_cols=41  Identities=20%  Similarity=0.247  Sum_probs=33.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~  396 (529)
                      +.++++|++|  -||+++|+.|+++|.++.+  | ++++.+++.++
T Consensus         1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   44 (242)
T TIGR01829         1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE   44 (242)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence            4689999998  9999999999999999877  4 55666655444

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07791 short chain dehydrogenase; Provisional

Probab=92.16  E-value=0.32  Score=49.31  Aligned_cols=44  Identities=18%  Similarity=0.169  Sum_probs=36.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~---------~~~~~l~~~~~  398 (529)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  ++.         ++.+++.+++.
T Consensus         6 ~k~~lITGas~--GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~   60 (286)
T PRK07791          6 GRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV   60 (286)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH
Confidence            46899999997  9999999999999999988  544         66777766653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.16  E-value=0.24  Score=47.89  Aligned_cols=43  Identities=21%  Similarity=0.314  Sum_probs=36.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++++.+.+++
T Consensus         5 ~~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~   49 (253)
T PRK08217          5 DKVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC   49 (253)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            45799999998  9999999999999999888  7877777776664

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=92.14  E-value=0.29  Score=54.56  Aligned_cols=94  Identities=14%  Similarity=0.116  Sum_probs=61.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------cccc---cceeeec-ccc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQ---HNLVLST-SYA  412 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~-------------~~~~---~~l~~~~-~~~  412 (529)
                      .-++|.|+|+ |  .+|+.||..|++.|++|++  ++++.+++..+.+.             .+..   ...+..+ +++
T Consensus         6 ~i~~V~VIGa-G--~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~   82 (507)
T PRK08268          6 SIATVAVIGA-G--AMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA   82 (507)
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH
Confidence            4568999999 5  9999999999999999999  88888877432221             1111   1112233 666


Q ss_pred             c-CcceEEE--EcCcCChhh-----hhc-CCCCceee-cccccCcc
Q 009674          413 A-HKTKIWL--VGDDLTGKE-----QAR-APKGTIFI-PYTQIPPR  448 (529)
Q Consensus       413 ~-~~~~vwi--vg~~~~~~~-----q~~-a~~G~~f~-~~~~~~~~  448 (529)
                      + ++++++|  |-+.++-+.     ... .++++++. ..|-+|+.
T Consensus        83 ~~~~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~i~  128 (507)
T PRK08268         83 DLADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSIT  128 (507)
T ss_pred             HhCCCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence            5 7888777  333333222     222 48899884 77777776

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=92.13  E-value=0.2  Score=51.15  Aligned_cols=83  Identities=14%  Similarity=0.204  Sum_probs=56.2

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCc--C--
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--L--  425 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~--  425 (529)
                      |.++|. |  .+|+++|+.|++.|.+|++  |++++.+.+++. +..      ..++.++  ++++++|  +-+.  +  
T Consensus         2 IgvIG~-G--~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~------~~~~~~~~~~~aDivi~~vp~~~~~~~   71 (291)
T TIGR01505         2 VGFIGL-G--IMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GAV------TAETARQVTEQADVIFTMVPDSPQVEE   71 (291)
T ss_pred             EEEEEe-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCc------ccCCHHHHHhcCCEEEEecCCHHHHHH
Confidence            778886 4  9999999999999999998  888888887654 111      1223332  5666644  2221  1  


Q ss_pred             ---Chhh-hhcCCCCceeecccccCcc
Q 009674          426 ---TGKE-QARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       426 ---~~~~-q~~a~~G~~f~~~~~~~~~  448 (529)
                         .+++ ...+++|+++++.|.++|.
T Consensus        72 v~~~~~~~~~~~~~g~iivd~st~~~~   98 (291)
T TIGR01505        72 VAFGENGIIEGAKPGKTLVDMSSISPI   98 (291)
T ss_pred             HHcCcchHhhcCCCCCEEEECCCCCHH
Confidence               1111 2356899999999998885

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=92.13  E-value=0.38  Score=46.72  Aligned_cols=30  Identities=17%  Similarity=0.320  Sum_probs=27.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+
T Consensus         3 ~k~~lVtG~s~--giG~~~a~~l~~~G~~vv~   32 (246)
T PRK12938          3 QRIAYVTGGMG--GIGTSICQRLHKDGFKVVA   32 (246)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence            35789999998  9999999999999999887

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.10  E-value=0.3  Score=50.67  Aligned_cols=147  Identities=18%  Similarity=0.211  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 009674          283 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI-----------------  332 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i-----------------  332 (529)
                      .+-+.-+..-++.|++.|++.--.  .       +++.++++|.|-   ++.+..= |++++.                 
T Consensus        43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~  122 (282)
T PRK14180         43 PASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFH  122 (282)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccC
Confidence            344445556667788888876543  3       233346777774   2444421 222331                 


Q ss_pred             -----eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674          333 -----KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  396 (529)
Q Consensus       333 -----rvv~Gn-----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~  396 (529)
                           |+..|+     .-|+..|++=+     +-.-++|+++|.+.  -||+-+|..|.++|..|++ .++-  .     
T Consensus       123 ~~n~g~l~~g~~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~ATVt~chs~T--~-----  193 (282)
T PRK14180        123 PTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFT--T-----  193 (282)
T ss_pred             hhhHHHHhcCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEEcCCC--C-----
Confidence                 222332     34666666544     34688999999998  9999999999999999999 2111  1     


Q ss_pred             Cccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCce
Q 009674          397 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF  455 (529)
Q Consensus       397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~  455 (529)
                                   ++++  +.+||+|  +|  +.++++..   ++|++++|+. ++..  ++.-|+-
T Consensus       194 -------------dl~~~~k~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~~~gkl~GDvd  243 (282)
T PRK14180        194 -------------DLKSHTTKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHVDGKIVGDVD  243 (282)
T ss_pred             -------------CHHHHhhhcCEEEEccCCcCcCCHHHc---CCCcEEEEec-ccccCCceeCCcC
Confidence                         2222  3566666  34  34777666   9999999998 6652  5556665

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=92.09  E-value=0.29  Score=53.10  Aligned_cols=38  Identities=24%  Similarity=0.263  Sum_probs=32.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~  392 (529)
                      .++|+++||+|  -||+++|+.|+++|.+|..  |+++++++
T Consensus       178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~r~~~~l~~  217 (406)
T PRK07424        178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALTSNSDKITL  217 (406)
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            45899999998  9999999999999999987  66666543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=92.07  E-value=0.24  Score=52.98  Aligned_cols=43  Identities=21%  Similarity=0.222  Sum_probs=34.8

Q ss_pred             HhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          346 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       346 ~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      ..+.+....+|+|+|+||  -||+++++.|.++|.+|..  |+.++.
T Consensus        53 ~~~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R~~~~~   97 (390)
T PLN02657         53 FRSKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAREKSGI   97 (390)
T ss_pred             ccccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEechhhc
Confidence            334444567899999999  9999999999999999988  665543

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.07  E-value=0.3  Score=50.73  Aligned_cols=146  Identities=20%  Similarity=0.234  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCccee----------eecCC--
Q 009674          284 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKIK----------VVDGS--  338 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~ir----------vv~Gn--  338 (529)
                      +-+.-+..-++.|++.|++..-.  .       +++.+++||.|-   ++.++.= |++++.+          =|||=  
T Consensus        44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~  123 (286)
T PRK14184         44 ASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHP  123 (286)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCH
Confidence            34444666677899999887543  3       333446788864   3555422 3334421          13332  


Q ss_pred             --------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe-cchhhHHHHH
Q 009674          339 --------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-ICKDDYEKLK  394 (529)
Q Consensus       339 --------------sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~l-~~~~~~~~l~  394 (529)
                                    .-|++.|++=+     +-.-++|+++|...  -||+-+|..|.+    ++-.|++ .++.      
T Consensus       124 ~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~AtVt~~hs~t------  195 (286)
T PRK14184        124 ENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSN--IVGKPLALMLGAPGKFANATVTVCHSRT------  195 (286)
T ss_pred             hhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhCCcccCCCEEEEEeCCc------
Confidence                          24666666543     44678999999997  999999999998    8888888 2111      


Q ss_pred             hhCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCce
Q 009674          395 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF  455 (529)
Q Consensus       395 ~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~  455 (529)
                                    .++++  +++||+|  +|  +.++++..   ++|++++|+. +++.  ++--|+-
T Consensus       196 --------------~~l~~~~~~ADIVI~AvG~p~li~~~~v---k~GavVIDVG-i~~~~~~l~GDVd  246 (286)
T PRK14184        196 --------------PDLAEECREADFLFVAIGRPRFVTADMV---KPGAVVVDVG-INRTDDGLVGDCD  246 (286)
T ss_pred             --------------hhHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-eeccCCCccCCcc
Confidence                          12322  3556666  33  34677666   9999999999 7763  4445554

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=92.06  E-value=0.24  Score=52.51  Aligned_cols=85  Identities=16%  Similarity=0.209  Sum_probs=50.8

Q ss_pred             EEEecccCchhhHHHHHHHHhccC-c-EEEe--cchhhHHHHHhhCcccc-ccceeeeccc---cc--CcceEEE--EcC
Q 009674          356 VLLRGTVTANKVANAVASSLCQMG-I-KVAT--ICKDDYEKLKLRIPVEA-QHNLVLSTSY---AA--HKTKIWL--VGD  423 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~-~-~v~l--~~~~~~~~l~~~~~~~~-~~~l~~~~~~---~~--~~~~vwi--vg~  423 (529)
                      |++.|+ |  .+|+++|+.|.+++ . ++++  ||.++++++.+++.... +..-+.+++.   ++  ++++++|  +|.
T Consensus         1 IlvlG~-G--~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-G--RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---S--HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-c--HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            689999 9  99999999999776 4 7888  99999999988742222 1111234433   32  6778877  444


Q ss_pred             cCChhhhh-cCCCCceeeccc
Q 009674          424 DLTGKEQA-RAPKGTIFIPYT  443 (529)
Q Consensus       424 ~~~~~~q~-~a~~G~~f~~~~  443 (529)
                      ...+.=.+ =+..|++++|.+
T Consensus        78 ~~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   78 FFGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             GGHHHHHHHHHHHT-EEEESS
T ss_pred             chhHHHHHHHHHhCCCeeccc
Confidence            42221111 124588888855

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07041 short chain dehydrogenase; Provisional

Probab=92.05  E-value=0.2  Score=48.18  Aligned_cols=40  Identities=18%  Similarity=0.253  Sum_probs=34.5

Q ss_pred             EEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          357 LLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       357 ~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +++|++|  -||+++|+.|+++|.+|++  |+.++.+.+.+++.
T Consensus         1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~   42 (230)
T PRK07041          1 LVVGGSS--GIGLALARAFAAEGARVTIASRSRDRLAAAARALG   42 (230)
T ss_pred             CeecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            4789998  9999999999999999988  88888887766653

>PRK06701 short chain dehydrogenase; Provisional

Probab=91.95  E-value=0.32  Score=49.43  Aligned_cols=43  Identities=23%  Similarity=0.347  Sum_probs=33.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+. ++.+.+.+++
T Consensus        46 ~k~iLItGasg--gIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~   91 (290)
T PRK06701         46 GKVALITGGDS--GIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRV   91 (290)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence            46799999998  9999999999999999988  543 3445554443

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=91.92  E-value=0.47  Score=53.19  Aligned_cols=44  Identities=14%  Similarity=0.122  Sum_probs=38.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..++|+++|+ |  -+|+|+|..|.+.|.+|.+  |+.++.++|.+++.
T Consensus       378 ~~k~vlIlGa-G--GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        378 AGKLFVVIGA-G--GAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            4578999999 5  7999999999999999888  88899999988763

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=91.87  E-value=0.23  Score=48.29  Aligned_cols=43  Identities=23%  Similarity=0.326  Sum_probs=35.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      .+.++++|++|  -||+++|+.|.++|.+|++   |++++.+++.+++
T Consensus         6 ~~~~lItG~s~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l   51 (247)
T PRK12935          6 GKVAIVTGGAK--GIGKAITVALAQEGAKVVINYNSSKEAAENLVNEL   51 (247)
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHH
Confidence            46899999998  9999999999999999987   4566666665554

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.86  E-value=0.33  Score=50.38  Aligned_cols=161  Identities=17%  Similarity=0.240  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 009674          283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI-----------------  332 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i-----------------  332 (529)
                      .+-+.-+..-.+.|++.|++..-  |.       +++.+++||.|-   ++.++.= |++++.                 
T Consensus        42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~  121 (282)
T PRK14166         42 PASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFH  121 (282)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence            34455556667788999988543  33       233346788773   3555421 222331                 


Q ss_pred             -----eeecC-C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674          333 -----KVVDG-S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  396 (529)
Q Consensus       333 -----rvv~G-n----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~  396 (529)
                           |+..| +    .-|++.|++=+     +-.-++|+++|...  -||+-+|..|.++|..|++ .++-        
T Consensus       122 ~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVt~chs~T--------  191 (282)
T PRK14166        122 PINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKT--------  191 (282)
T ss_pred             hhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence                 22233 1    34666666544     34678999999997  9999999999999999998 2110        


Q ss_pred             Cccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCceeec-----CCcc
Q 009674          397 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAM  462 (529)
Q Consensus       397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~  462 (529)
                                  .++++  +++||+|  +|  +.++++..   ++|+++||+. +++.   ++--||-+..     ...+
T Consensus       192 ------------~nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iT  255 (282)
T PRK14166        192 ------------KDLSLYTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRLESGKIVGDVDFEEVSKKSSYIT  255 (282)
T ss_pred             ------------CCHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEec-ccccCCCCeeCCCCHHHHHhhccEec
Confidence                        12332  3566766  33  34777766   9999999998 6662   4446665332     1124


Q ss_pred             ccCCCCc
Q 009674          463 IIPPSLS  469 (529)
Q Consensus       463 ~~P~~~~  469 (529)
                      .||+.+-
T Consensus       256 PVPGGVG  262 (282)
T PRK14166        256 PVPGGVG  262 (282)
T ss_pred             CCCCCch
Confidence            5666544

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=91.84  E-value=0.45  Score=52.58  Aligned_cols=61  Identities=26%  Similarity=0.382  Sum_probs=45.7

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      |||.....+.--...+...+.|+++|+ |  .+|++++..|.+.|.++.+  |+.++.+++.++.+
T Consensus       314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-G--giG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~  376 (477)
T PRK09310        314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-G--GAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ  376 (477)
T ss_pred             cCHHHHHHHHHhcCCCcCCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            556555555432334445678999996 6  8999999999999999888  88888888877653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=91.82  E-value=0.27  Score=47.58  Aligned_cols=35  Identities=23%  Similarity=0.226  Sum_probs=30.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |++++
T Consensus         2 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~   38 (236)
T PRK06483          2 PAPILITGAGQ--RIGLALAWHLLAQGQPVIVSYRTHYP   38 (236)
T ss_pred             CceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            35799999998  9999999999999999988  65544

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=91.69  E-value=0.15  Score=51.13  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=29.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      .|+|+||||  .||+.+++.|.++|.+|..  |+.++.
T Consensus         1 ~ilVtGatG--~iG~~vv~~L~~~g~~V~~~~R~~~~~   36 (285)
T TIGR03649         1 TILLTGGTG--KTASRIARLLQAASVPFLVASRSSSSS   36 (285)
T ss_pred             CEEEEcCCC--hHHHHHHHHHHhCCCcEEEEeCCCccc
Confidence            389999999  9999999999999998888  776643

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=91.68  E-value=0.61  Score=46.47  Aligned_cols=150  Identities=17%  Similarity=0.136  Sum_probs=84.4

Q ss_pred             EEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCccccccceeeecccc-c-CcceEEEEc----CcC-C
Q 009674          357 LLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVG----DDL-T  426 (529)
Q Consensus       357 ~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwivg----~~~-~  426 (529)
                      ..+|.||  .||+++|+.|.+.|..|.+   |.++.++...+++...     +...+.+ + +.++|+++=    .+. .
T Consensus         4 ~~i~GtG--niG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-----i~~~~~~dA~~~aDVVvLAVP~~a~~~v   76 (211)
T COG2085           4 IAIIGTG--NIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-----ITGGSNEDAAALADVVVLAVPFEAIPDV   76 (211)
T ss_pred             EEEeccC--hHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-----cccCChHHHHhcCCEEEEeccHHHHHhH
Confidence            4566677  9999999999999999999   6777788777775544     2233333 4 677776621    111 1


Q ss_pred             hhhhhcCCCCceeecccccCcc-CCCCCceee---cCCcc-----ccCCCCccccccccccCcchhHHHHHhhHhhhhcC
Q 009674          427 GKEQARAPKGTIFIPYTQIPPR-KLRKDCFYH---STPAM-----IIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEG  497 (529)
Q Consensus       427 ~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~---~~~a~-----~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEg  497 (529)
                      .+|.+.+-.|.++||.. +|-. ..++-=+|.   ++.+.     .+|++ +-+..+|+ +|         ++.+..+..
T Consensus        77 ~~~l~~~~~~KIvID~t-np~~~~~~~~~~~~~~~~~saae~va~~lp~a-kVVkAFn~-i~---------a~~l~~~~~  144 (211)
T COG2085          77 LAELRDALGGKIVIDAT-NPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGA-KVVKAFNT-IP---------AAVLADLAK  144 (211)
T ss_pred             HHHHHHHhCCeEEEecC-CCccccCCccccccCCCCCcHHHHHHHHCCCc-chhhhhcc-cC---------HHHhccCCC
Confidence            34454445688888887 5532 444333332   33332     24444 11111211 11         122222222


Q ss_pred             CC-CC---ccchhhhhHHHHHHHHHhcCCccC
Q 009674          498 WD-LN---ECGQTMCDIHQVWHASLRHGFRPL  525 (529)
Q Consensus       498 w~-~~---e~G~iv~~id~i~~aa~kHGF~p~  525 (529)
                      -. ..   =||+-.+-..++.+++.+-||+|+
T Consensus       145 ~~~~~~v~vagDD~~Ak~~v~~L~~~iG~~~l  176 (211)
T COG2085         145 PGGRRDVLVAGDDAEAKAVVAELAEDIGFRPL  176 (211)
T ss_pred             cCCceeEEEecCcHHHHHHHHHHHHhcCccee
Confidence            11 00   134334677889999999999994

>TIGR00658 orni_carb_tr ornithine carbamoyltransferase

Probab=91.68  E-value=1.9  Score=45.06  Aligned_cols=158  Identities=19%  Similarity=0.254  Sum_probs=96.4

Q ss_pred             HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      |.++|++++.|+.=    +++|.       |....-+.+.|+|+         ..++.|+.+.+         +=..++.
T Consensus        61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~  140 (304)
T TIGR00658        61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII  140 (304)
T ss_pred             HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            45699999999643    33444       35566678888887         35677777543         1134555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhC---ccccccceeeec-cccc--Ccc
Q 009674          347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRI---PVEAQHNLVLST-SYAA--HKT  416 (529)
Q Consensus       347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~~~---~~~~~~~l~~~~-~~~~--~~~  416 (529)
                      +.... +..+|.++|..+  .+.+..+.+|.+-|++|.+-..+.++   .+.+++   ..+.+.. +.++ ++++  +++
T Consensus       141 e~~g~l~g~~v~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~a  217 (304)
T TIGR00658       141 EHFGKLKGVKVVYVGDGN--NVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEIAKENGGS-VELTHDPVEAVKGA  217 (304)
T ss_pred             HHhCCCCCcEEEEEeCCC--chHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence            55432 456899999985  89999999999999999993333332   111111   1112223 3333 7764  888


Q ss_pred             eEEEEcCcCChh------hhhcCCCCceeecccccCcc---CCCCCce-eecCCcc
Q 009674          417 KIWLVGDDLTGK------EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM  462 (529)
Q Consensus       417 ~vwivg~~~~~~------~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~  462 (529)
                      +|+.+..|....      +....     +-+| +++.+   ..|+||. .|.+|+.
T Consensus       218 Dvvy~~~w~~~~~~~~~~~~~~~-----~~~y-~l~~~~l~~~~~~~ivmHplP~~  267 (304)
T TIGR00658       218 DVIYTDVWVSMGEEDKKEERLKL-----FRPY-QVNEELMELAKPEVIFMHCLPAH  267 (304)
T ss_pred             CEEEEcCcccCccccccHHHHHH-----hcCC-cCCHHHHhhcCCCCEEECCCCCC
Confidence            887775544211      11112     2233 37777   5678886 5888874

Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.

>PRK06720 hypothetical protein; Provisional

Probab=91.65  E-value=0.29  Score=46.49  Aligned_cols=44  Identities=18%  Similarity=0.168  Sum_probs=36.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.++++|+++  -||+++|+.|+++|.+|.+  |+.+..++..+++
T Consensus        15 ~gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l   60 (169)
T PRK06720         15 AGKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI   60 (169)
T ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            356889999997  8999999999999999988  6666666665554

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=91.63  E-value=0.38  Score=50.91  Aligned_cols=39  Identities=18%  Similarity=0.156  Sum_probs=34.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~  392 (529)
                      +.+.|+|+||+|  =||+.|+..|-++|..|.-  |++++-++
T Consensus         5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~gtVR~~~~~k~   45 (327)
T KOG1502|consen    5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRGTVRDPEDEKK   45 (327)
T ss_pred             CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEEEEcCcchhhh
Confidence            678999999999  9999999999999999987  88877433

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.62  E-value=0.32  Score=50.43  Aligned_cols=147  Identities=23%  Similarity=0.263  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns  339 (529)
                      ++-+.-+..-.+.|++.|+++.-  |.       +++.++++|.|.   ++.++.= |++++          .+=|||=+
T Consensus        42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~  121 (282)
T PRK14169         42 PASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFS  121 (282)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCC
Confidence            34445566667788899987654  33       233346788864   3555421 32232          12245543


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                                      -|+..|++=+     +-.-++|+++|...  -||+-+|..|.++|..|++ .++-         
T Consensus       122 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVtichs~T---------  190 (282)
T PRK14169        122 PVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSN--IVGRPLAGLMVNHDATVTIAHSKT---------  190 (282)
T ss_pred             hhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEECCCC---------
Confidence                            3666666544     44678999999997  9999999999999999998 1111         


Q ss_pred             ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674          398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  455 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  455 (529)
                                 .++++  +++||+|  +|  ..++++..   ++|+++||+. +.+.   ++.-||-
T Consensus       191 -----------~~l~~~~~~ADIvI~AvG~p~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd  242 (282)
T PRK14169        191 -----------RNLKQLTKEADILVVAVGVPHFIGADAV---KPGAVVIDVG-ISRGADGKLLGDVD  242 (282)
T ss_pred             -----------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCcEEEEee-ccccCCCCeeecCc
Confidence                       12322  3566666  33  35777766   9999999998 6652   4445655

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.60  E-value=0.31  Score=49.11  Aligned_cols=46  Identities=20%  Similarity=0.195  Sum_probs=35.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~---~~~~~~l~~~~~  398 (529)
                      .+.++++|+++++-||+++|+.|+++|.+|.+  |+   +++.++++++++
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~   60 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG   60 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence            36789999972137999999999999999988  54   356666766653

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.54  E-value=0.43  Score=49.63  Aligned_cols=138  Identities=18%  Similarity=0.207  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh--
Q 009674          285 INSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS--  339 (529)
Q Consensus       285 in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns--  339 (529)
                      -+.-+..-.+.|++.|++..  -|.       +++.+++||.|-   ++.++.= |++++.          +=|||=+  
T Consensus        52 S~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~  131 (287)
T PRK14176         52 SKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPY  131 (287)
T ss_pred             hHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChh
Confidence            34445556677888888654  443       344456777764   3554421 222331          2244433  


Q ss_pred             --------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccc
Q 009674          340 --------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVE  400 (529)
Q Consensus       340 --------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~  400 (529)
                                    -|+..|++-+.     -.-++|+|+|...  -||+-+|..|.++|-.|++-+ .+..         
T Consensus       132 N~g~l~~g~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVtv~h-s~T~---------  199 (287)
T PRK14176        132 NMGKLMIGDEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSN--VVGKPMAAMLLNRNATVSVCH-VFTD---------  199 (287)
T ss_pred             hhhhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCEEEEEe-ccCC---------
Confidence                          26666665443     3678999999996  899999999999999999911 1111         


Q ss_pred             cccceeeeccccc--CcceEEEE--cC--cCChhhhhcCCCCceeecccccCc
Q 009674          401 AQHNLVLSTSYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       401 ~~~~l~~~~~~~~--~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                               ++++  ++++|+|+  |+  .++++.   .++|++++|+. +..
T Consensus       200 ---------~l~~~~~~ADIvv~AvG~p~~i~~~~---vk~gavVIDvG-in~  239 (287)
T PRK14176        200 ---------DLKKYTLDADILVVATGVKHLIKADM---VKEGAVIFDVG-ITK  239 (287)
T ss_pred             ---------CHHHHHhhCCEEEEccCCccccCHHH---cCCCcEEEEec-ccc
Confidence                     2222  35566553  43  466554   49999999998 554

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=91.54  E-value=0.86  Score=49.73  Aligned_cols=101  Identities=17%  Similarity=0.123  Sum_probs=68.1

Q ss_pred             eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 009674          332 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL  407 (529)
Q Consensus       332 irvv~Gnsltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~  407 (529)
                      -|.=+|.|.. -.+++.+.  ...++|+|+|+-   .||+.+|+.+...|.+|++  +++.|.+.-++ .+..       
T Consensus       180 n~~g~g~s~~-~~i~r~t~~~l~GktVvViG~G---~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~-------  247 (413)
T cd00401         180 NLYGCRESLI-DGIKRATDVMIAGKVAVVAGYG---DVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYE-------  247 (413)
T ss_pred             ccchhchhhH-HHHHHhcCCCCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCE-------
Confidence            4555777753 44555443  356789999998   9999999999999999988  67777664433 2221       


Q ss_pred             eccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccc
Q 009674          408 STSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       408 ~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                      ..+.++  +.++++|  .|  ..++.+....+++|.+++-+..
T Consensus       248 ~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~  290 (413)
T cd00401         248 VMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGH  290 (413)
T ss_pred             EccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCC
Confidence            112232  4567766  33  3455666889999999987775

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=91.54  E-value=0.4  Score=45.77  Aligned_cols=79  Identities=13%  Similarity=0.169  Sum_probs=46.6

Q ss_pred             HHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 009674          341 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  413 (529)
Q Consensus       341 taavv~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  413 (529)
                      |+..+++=     ++..-++|+++|...  -||+-++..|.++|-.|++  .+.+.++   +.+                
T Consensus        19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~--~VG~Pla~lL~~~~atVt~~h~~T~~l~---~~~----------------   77 (160)
T PF02882_consen   19 TPLAIIELLEYYGIDLEGKKVVVVGRSN--IVGKPLAMLLLNKGATVTICHSKTKNLQ---EIT----------------   77 (160)
T ss_dssp             HHHHHHHHHHHTT-STTT-EEEEE-TTT--TTHHHHHHHHHHTT-EEEEE-TTSSSHH---HHH----------------
T ss_pred             CHHHHHHHHHhcCCCCCCCEEEEECCcC--CCChHHHHHHHhCCCeEEeccCCCCccc---cee----------------
Confidence            45555443     345678999999997  9999999999999999999  2111221   110                


Q ss_pred             CcceEEEEcCc----CChhhhhcCCCCceeeccc
Q 009674          414 HKTKIWLVGDD----LTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       414 ~~~~vwivg~~----~~~~~q~~a~~G~~f~~~~  443 (529)
                      +.+||+|+.-+    ++++   +.++|+++||+.
T Consensus        78 ~~ADIVVsa~G~~~~i~~~---~ik~gavVIDvG  108 (160)
T PF02882_consen   78 RRADIVVSAVGKPNLIKAD---WIKPGAVVIDVG  108 (160)
T ss_dssp             TTSSEEEE-SSSTT-B-GG---GS-TTEEEEE--
T ss_pred             eeccEEeeeeccccccccc---cccCCcEEEecC
Confidence            35566663322    3333   348899999887

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.53  E-value=0.32  Score=50.53  Aligned_cols=139  Identities=24%  Similarity=0.262  Sum_probs=89.5

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns  339 (529)
                      .+-+.-+..-++.|++.|+++.-.  -       +++.+++||.|.   ++.++.= |++++          .+=|||=+
T Consensus        41 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~  120 (287)
T PRK14173         41 PASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFH  120 (287)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence            344455666777899999887543  3       233346788774   3555522 33233          12245543


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                                      -|+..|++=+     +-.-++|+|+|.+.  -||+-+|..|.++|-.|++ .++-         
T Consensus       121 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVtichs~T---------  189 (287)
T PRK14173        121 PLNVGRLWMGGEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSN--IVGKPLAALLLREDATVTLAHSKT---------  189 (287)
T ss_pred             hhhhHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEeCCCC---------
Confidence                            3666666644     33578999999998  9999999999999999998 1111         


Q ss_pred             ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                 .++++  +++||+|  +|  .-++++..   ++|+++||+. +++
T Consensus       190 -----------~~l~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDVG-in~  230 (287)
T PRK14173        190 -----------QDLPAVTRRADVLVVAVGRPHLITPEMV---RPGAVVVDVG-INR  230 (287)
T ss_pred             -----------CCHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence                       02222  3556655  44  34666666   9999999998 554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.52  E-value=0.3  Score=49.00  Aligned_cols=43  Identities=16%  Similarity=0.292  Sum_probs=32.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~  396 (529)
                      +.++++|++++.-||+|+|+.|+++|.+|.+  |+.   +..++++.+
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~   54 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ   54 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc
Confidence            5789999984236999999999999999988  542   334444443

>PRK08655 prephenate dehydrogenase; Provisional

Probab=91.43  E-value=0.48  Score=51.77  Aligned_cols=83  Identities=14%  Similarity=0.201  Sum_probs=55.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCCh---
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLTG---  427 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~~---  427 (529)
                      +|.++|++|  .+|+++|+.|.+.|.+|.+  |++++.+++..+.+...      .++.++  .+++++|+--..+.   
T Consensus         2 kI~IIGG~G--~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~------~~~~~e~~~~aDvVIlavp~~~~~~   73 (437)
T PRK08655          2 KISIIGGTG--GLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY------ANDNIDAAKDADIVIISVPINVTED   73 (437)
T ss_pred             EEEEEecCC--HHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee------ccCHHHHhccCCEEEEecCHHHHHH
Confidence            589999999  9999999999999999888  77777666665543221      224442  56666553211111   


Q ss_pred             --hh-hhcCCCCceeeccccc
Q 009674          428 --KE-QARAPKGTIFIPYTQI  445 (529)
Q Consensus       428 --~~-q~~a~~G~~f~~~~~~  445 (529)
                        ++ ...+++|+++++++-+
T Consensus        74 vl~~l~~~l~~~~iViDvsSv   94 (437)
T PRK08655         74 VIKEVAPHVKEGSLLMDVTSV   94 (437)
T ss_pred             HHHHHHhhCCCCCEEEEcccc
Confidence              12 2235789999999853

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.36  E-value=0.3  Score=48.26  Aligned_cols=44  Identities=16%  Similarity=0.218  Sum_probs=32.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+  |+ ++.++..+++
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~   52 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKL   52 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhh
Confidence            36789999982117999999999999999998  65 3444333333

>PRK07856 short chain dehydrogenase; Provisional

Probab=91.28  E-value=0.24  Score=48.51  Aligned_cols=35  Identities=17%  Similarity=0.246  Sum_probs=30.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         6 ~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r~~~~   42 (252)
T PRK07856          6 GRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGRRAPE   42 (252)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            57899999998  9999999999999999998  65544

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.26  E-value=0.45  Score=46.97  Aligned_cols=32  Identities=13%  Similarity=0.282  Sum_probs=27.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~   37 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFF   37 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence            46899999994337999999999999999987

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.26  E-value=0.33  Score=49.02  Aligned_cols=46  Identities=15%  Similarity=0.247  Sum_probs=35.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~~~  398 (529)
                      .+.|+++|+++++-||+|+|+.|+++|.+|.+  |++   ++++++.++++
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~   55 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG   55 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence            36889999972137999999999999999998  663   45666655554

>PRK07577 short chain dehydrogenase; Provisional

Probab=91.21  E-value=0.23  Score=47.69  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=29.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      +.|+++|++|  .||+++|+.|+++|.+|.+  |+.+
T Consensus         4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r~~~   38 (234)
T PRK07577          4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIARSAI   38 (234)
T ss_pred             CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            5799999998  9999999999999999988  5544

>PRK06940 short chain dehydrogenase; Provisional

Probab=91.21  E-value=0.44  Score=47.92  Aligned_cols=41  Identities=20%  Similarity=0.261  Sum_probs=33.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+++|+ |  -||+++|+.|+ +|.+|.+  |+.++++++.+++.
T Consensus         3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~   45 (275)
T PRK06940          3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLR   45 (275)
T ss_pred             CEEEEECC-C--hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHH
Confidence            46788887 5  79999999997 7999998  88888877776653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=91.13  E-value=0.29  Score=48.15  Aligned_cols=32  Identities=16%  Similarity=0.229  Sum_probs=28.7

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ...+.++++|++|  -||+++|+.|+++|.+|.+
T Consensus         8 l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~   39 (253)
T PRK08993          8 LEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVG   39 (253)
T ss_pred             CCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence            3456899999998  9999999999999999987

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=91.08  E-value=0.27  Score=51.00  Aligned_cols=64  Identities=13%  Similarity=0.158  Sum_probs=43.8

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc---cCcceEEE--EcCcCChh
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA---AHKTKIWL--VGDDLTGK  428 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~---~~~~~vwi--vg~~~~~~  428 (529)
                      |+++|+||  -||++++..|++.|-+|++  |+..+-+..   +....+ +   ...+.   +.++|+||  +|+.|-.+
T Consensus         1 IliTGgTG--lIG~~L~~~L~~~gh~v~iltR~~~~~~~~---~~~~v~-~---~~~~~~~~~~~~DavINLAG~~I~~r   71 (297)
T COG1090           1 ILITGGTG--LIGRALTARLRKGGHQVTILTRRPPKASQN---LHPNVT-L---WEGLADALTLGIDAVINLAGEPIAER   71 (297)
T ss_pred             CeEecccc--chhHHHHHHHHhCCCeEEEEEcCCcchhhh---cCcccc-c---cchhhhcccCCCCEEEECCCCccccc
Confidence            57999999  9999999999999999999  766655422   111110 1   22222   13577777  88888766

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=91.01  E-value=0.44  Score=48.73  Aligned_cols=92  Identities=12%  Similarity=0.055  Sum_probs=56.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------ccc---ccceeeec-cccc-
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEA---QHNLVLST-SYAA-  413 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~-------------~~~---~~~l~~~~-~~~~-  413 (529)
                      ++|.++|+-   .+|+++|..|++.|.+|.+  ++.+++++.++++.             .+.   .......+ ++++ 
T Consensus         5 ~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   81 (295)
T PLN02545          5 KKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL   81 (295)
T ss_pred             CEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence            469999986   9999999999999999999  77777764332211             100   00112223 5554 


Q ss_pred             CcceEEEE--cCcCChhh------hhcCCCCceee-cccccCcc
Q 009674          414 HKTKIWLV--GDDLTGKE------QARAPKGTIFI-PYTQIPPR  448 (529)
Q Consensus       414 ~~~~vwiv--g~~~~~~~------q~~a~~G~~f~-~~~~~~~~  448 (529)
                      ++++++|.  -+..+-++      ...++++++++ ..|-+++.
T Consensus        82 ~~aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i~~~  125 (295)
T PLN02545         82 RDADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSISIT  125 (295)
T ss_pred             CCCCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence            77877663  11111111      12478898886 67667766

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.98  E-value=0.49  Score=46.49  Aligned_cols=32  Identities=25%  Similarity=0.340  Sum_probs=27.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|++|.+-||+++|+.|.++|.+|.+
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~   36 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFF   36 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence            36799999994236999999999999999988

>PRK08226 short chain dehydrogenase; Provisional

Probab=90.97  E-value=0.4  Score=47.14  Aligned_cols=34  Identities=15%  Similarity=0.367  Sum_probs=30.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         6 ~~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~~~   41 (263)
T PRK08226          6 GKTALITGALQ--GIGEGIARVFARHGANLILLDISPE   41 (263)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHH
Confidence            46899999998  9999999999999999998  5543

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.93  E-value=0.42  Score=49.72  Aligned_cols=146  Identities=20%  Similarity=0.236  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcc-------------------
Q 009674          284 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLK-------------------  331 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~-------------------  331 (529)
                      +-+.-++.-++.|++.|++..-.=         +++.+++||.|-   |+.++.= |++++                   
T Consensus        45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~  124 (288)
T PRK14171         45 ASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHP  124 (288)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCc
Confidence            344445566778888888765432         334446777774   3555421 22222                   


Q ss_pred             ---eeeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          332 ---IKVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       332 ---irvv~Gn-----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                         =|+..|+     .-|++.|++=+     +-.-++|+++|...  -||+-+|..|.++|-.|++ .++          
T Consensus       125 ~N~g~l~~g~~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~--iVGkPla~lL~~~~ATVtichs~----------  192 (288)
T PRK14171        125 LNVGYLHSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSN--IVGKPLSALLLKENCSVTICHSK----------  192 (288)
T ss_pred             cchhhhhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCC----------
Confidence               1233443     34666666544     33578999999998  9999999999999999998 211          


Q ss_pred             ccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCcc---CCCCCce
Q 009674          398 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  455 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  455 (529)
                                ..++++  +++||+|  +|+  .++++..   ++|+++||+. +.+.   ++.-|+-
T Consensus       193 ----------T~~L~~~~~~ADIvV~AvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd  245 (288)
T PRK14171        193 ----------THNLSSITSKADIVVAAIGSPLKLTAEYF---NPESIVIDVG-INRISGNKIIGDVD  245 (288)
T ss_pred             ----------CCCHHHHHhhCCEEEEccCCCCccCHHHc---CCCCEEEEee-ccccCCCCeECCcc
Confidence                      112332  3566766  443  4677666   9999999998 7663   4446655

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.80  E-value=0.42  Score=47.40  Aligned_cols=46  Identities=17%  Similarity=0.234  Sum_probs=34.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~  397 (529)
                      ..+.|+++|+++++-||+++|+.|+++|.+|.+  |+.+   +.+++++++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~   59 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL   59 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh
Confidence            357899999983126999999999999999988  6543   345555554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=90.72  E-value=0.44  Score=45.67  Aligned_cols=40  Identities=23%  Similarity=0.327  Sum_probs=31.4

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  397 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~  397 (529)
                      |+++|++|  -||+.+|+.|+++|.+|.+  |+. ++.+.+++++
T Consensus         1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   43 (239)
T TIGR01830         1 ALVTGASR--GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL   43 (239)
T ss_pred             CEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence            57899998  9999999999999999888  443 4555555443

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=90.71  E-value=0.57  Score=47.70  Aligned_cols=85  Identities=11%  Similarity=0.119  Sum_probs=53.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc-CcceEEEEcCcCCh---
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA-HKTKIWLVGDDLTG---  427 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~-~~~~vwivg~~~~~---  427 (529)
                      +|.++| .|  .+|.++|+.|.+.|.+|..  ++++..++++++-...      ..+ +.++ ++++++|+--..+.   
T Consensus         2 ~I~IIG-~G--~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~------~~~~~~~~~~~aDlVilavp~~~~~~   72 (279)
T PRK07417          2 KIGIVG-LG--LIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVD------EASTDLSLLKDCDLVILALPIGLLLP   72 (279)
T ss_pred             eEEEEe-ec--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcc------cccCCHhHhcCCCEEEEcCCHHHHHH
Confidence            588999 56  9999999999999999988  7778888776541100      122 3333 56777553111100   


Q ss_pred             --hhh-hcCCCCceeecccccCcc
Q 009674          428 --KEQ-ARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       428 --~~q-~~a~~G~~f~~~~~~~~~  448 (529)
                        ++. ..+++++++++++-+++.
T Consensus        73 ~~~~l~~~l~~~~ii~d~~Svk~~   96 (279)
T PRK07417         73 PSEQLIPALPPEAIVTDVGSVKAP   96 (279)
T ss_pred             HHHHHHHhCCCCcEEEeCcchHHH
Confidence              122 234678888888766654

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.69  E-value=0.66  Score=48.24  Aligned_cols=139  Identities=19%  Similarity=0.210  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns  339 (529)
                      .+-+.-++.-++.|++.|++.  +-|-       ++..++++|.|-   ++.++.= |++++          .+=|||=+
T Consensus        45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~  124 (285)
T PRK10792         45 PASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFH  124 (285)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccC
Confidence            344555666777889999884  3443       233336788773   3555422 22232          12234432


Q ss_pred             ----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          340 ----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       340 ----------------ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                                      -|++.|++-+.     -..++|+|+|...  -+|+-+|..|.++|-.|++ .++  ..      
T Consensus       125 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVG~Pla~lL~~~~atVtv~hs~--T~------  194 (285)
T PRK10792        125 PYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASN--IVGRPMSLELLLAGCTVTVCHRF--TK------  194 (285)
T ss_pred             hhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCeEEEEECC--CC------
Confidence                            36777766553     3578999999996  8999999999999999999 211  01      


Q ss_pred             ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                  ++++  +.++++|  +|  +.++++..   ++|++++|+. +.+
T Consensus       195 ------------~l~~~~~~ADIvi~avG~p~~v~~~~v---k~gavVIDvG-in~  234 (285)
T PRK10792        195 ------------NLRHHVRNADLLVVAVGKPGFIPGEWI---KPGAIVIDVG-INR  234 (285)
T ss_pred             ------------CHHHHHhhCCEEEEcCCCcccccHHHc---CCCcEEEEcc-ccc
Confidence                        2332  3556655  32  35666555   9999999998 655

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=90.66  E-value=0.74  Score=40.76  Aligned_cols=86  Identities=13%  Similarity=0.157  Sum_probs=48.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhc-cCcEEEe---cchhhHHHHHhhCcccccccee-eec--ccccCcceEEE--EcCcC
Q 009674          355 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLV-LST--SYAAHKTKIWL--VGDDL  425 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~-~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~-~~~--~~~~~~~~vwi--vg~~~  425 (529)
                      +|.++|++|  .+|+.++..|.+ +++++..   +++++-+.++..-+. .++..+ ..+  +++..++++++  +++..
T Consensus         1 ki~iiG~~g--~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~   77 (122)
T smart00859        1 KVAIVGATG--YVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPH-LKGEVVLELEPEDFEELAVDIVFLALPHGV   77 (122)
T ss_pred             CEEEECCCC--hHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcc-cccccccccccCChhhcCCCEEEEcCCcHH
Confidence            478999999  999999999996 6877666   333222233222111 100101 111  22213566654  45444


Q ss_pred             Chh----hhhcCCCCceeeccc
Q 009674          426 TGK----EQARAPKGTIFIPYT  443 (529)
Q Consensus       426 ~~~----~q~~a~~G~~f~~~~  443 (529)
                      ..+    -+..+.+|.+++|.+
T Consensus        78 ~~~~~~~~~~~~~~g~~viD~s   99 (122)
T smart00859       78 SKEIAPLLPKAAEAGVKVIDLS   99 (122)
T ss_pred             HHHHHHHHHhhhcCCCEEEECC
Confidence            444    233468999999988

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=90.66  E-value=0.69  Score=48.03  Aligned_cols=92  Identities=13%  Similarity=0.097  Sum_probs=60.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc-----cc--ccceeeeccccc--CcceEEE--
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-----EA--QHNLVLSTSYAA--HKTKIWL--  420 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~-----~~--~~~l~~~~~~~~--~~~~vwi--  420 (529)
                      .+|.++|+-   .+|.++|..|++.|.+|++  |++++.+.+++.-..     +.  ..+....++.++  ++++++|  
T Consensus         5 m~I~iIG~G---~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~   81 (328)
T PRK14618          5 MRVAVLGAG---AWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA   81 (328)
T ss_pred             CeEEEECcC---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence            468999986   9999999999999999999  888888888764211     10  011112225543  5666655  


Q ss_pred             EcCcCChhhhhcCCCCceeecccc-cCcc
Q 009674          421 VGDDLTGKEQARAPKGTIFIPYTQ-IPPR  448 (529)
Q Consensus       421 vg~~~~~~~q~~a~~G~~f~~~~~-~~~~  448 (529)
                      +-..-..+-...+++++.++.++. ++|.
T Consensus        82 v~~~~~~~v~~~l~~~~~vi~~~~Gi~~~  110 (328)
T PRK14618         82 VPSKALRETLAGLPRALGYVSCAKGLAPD  110 (328)
T ss_pred             CchHHHHHHHHhcCcCCEEEEEeeccccC
Confidence            222222333345688999999887 6654

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.66  E-value=0.32  Score=50.73  Aligned_cols=100  Identities=20%  Similarity=0.183  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns  339 (529)
                      .+-+.-+...++.|++.|+++  .-|-       +++.+++||.|-   ++.++.= |++++          .+=|||=+
T Consensus        44 ~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~  123 (296)
T PRK14188         44 PASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLH  123 (296)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence            345555677788999999984  4443       223336788883   3555522 33343          12245543


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                                      -|+..|++=+     +-.-++|.++|.++  -+|+.+|+.|.++|..|++
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~--~mG~PmA~~L~~~g~tVtv  187 (296)
T PRK14188        124 VVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN--LVGKPMAQLLLAANATVTI  187 (296)
T ss_pred             hhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc--chHHHHHHHHHhCCCEEEE
Confidence                            2566666443     44688999999998  9999999999999999999

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=90.53  E-value=0.46  Score=49.31  Aligned_cols=37  Identities=16%  Similarity=0.142  Sum_probs=31.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~  392 (529)
                      ++|+++|++|  =||+++|+.|.++|.+|+.  |+++....
T Consensus         5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~   43 (349)
T TIGR02622         5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYSLDPPTSPN   43 (349)
T ss_pred             CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEeCCCccchh
Confidence            5799999999  9999999999999999987  55544333

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=90.50  E-value=0.63  Score=50.17  Aligned_cols=125  Identities=14%  Similarity=0.142  Sum_probs=78.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--c---------cccceeeecccc-c-CcceEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------AQHNLVLSTSYA-A-HKTKIW  419 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~--~---------~~~~l~~~~~~~-~-~~~~vw  419 (529)
                      +|.|+|..   -+|..+|..|++ |.+|+.  +++++.+++++....  +         ....+...++.. + ++++++
T Consensus         2 kI~VIGlG---yvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v   77 (388)
T PRK15057          2 KITISGTG---YVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV   77 (388)
T ss_pred             EEEEECCC---HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence            58888877   999999987775 999998  899999999875221  0         111211222333 2 567664


Q ss_pred             E--EcCcCChh--------------hhhcCCCCceeecccccCcc---CCCCCc---eeecCCccccCCCCccccccccc
Q 009674          420 L--VGDDLTGK--------------EQARAPKGTIFIPYTQIPPR---KLRKDC---FYHSTPAMIIPPSLSNMHSCENW  477 (529)
Q Consensus       420 i--vg~~~~~~--------------~q~~a~~G~~f~~~~~~~~~---~~R~dc---~y~~~~a~~~P~~~~~~~~~e~~  477 (529)
                      |  |++.++.+              +..++++|.+++.-|-+||.   ++++..   -...+|..-.|++.-    -++-
T Consensus        78 ii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~~PE~l~~G~a~----~d~~  153 (388)
T PRK15057         78 IIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKAL----YDNL  153 (388)
T ss_pred             EEeCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHHHHhhcCcEEECcccccCCccc----cccc
Confidence            4  66554432              22345899999999999998   332222   123356666666532    2345


Q ss_pred             cCcchhHHHH
Q 009674          478 LGRRVMSAWR  487 (529)
Q Consensus       478 ~p~r~~~Ac~  487 (529)
                      .|+|+|.+|-
T Consensus       154 ~p~rvv~G~~  163 (388)
T PRK15057        154 HPSRIVIGER  163 (388)
T ss_pred             CCCEEEEEcC
Confidence            6888877643

>PRK06523 short chain dehydrogenase; Provisional

Probab=90.47  E-value=0.31  Score=47.85  Aligned_cols=35  Identities=20%  Similarity=0.328  Sum_probs=30.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         8 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r~~~   44 (260)
T PRK06523          8 AGKRALVTGGTK--GIGAATVARLLEAGARVVTTARSRP   44 (260)
T ss_pred             CCCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeCChh
Confidence            346899999998  9999999999999999988  5543

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=90.40  E-value=0.72  Score=42.61  Aligned_cols=65  Identities=23%  Similarity=0.293  Sum_probs=42.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccccce--eee--ccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNL--VLS--TSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~~~l--~~~--~~~~~-~~~~vwiv  421 (529)
                      +|.++||+|  .||+++|..|+..+.  ++.|  +++++.+....++..-.....  ..+  .++++ ++++|+|+
T Consensus         2 KV~IiGa~G--~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvi   75 (141)
T PF00056_consen    2 KVAIIGAAG--NVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVI   75 (141)
T ss_dssp             EEEEESTTS--HHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEE
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEE
Confidence            789999998  999999999995554  3554  666666655544333211111  122  35666 89988775

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.39  E-value=0.5  Score=48.93  Aligned_cols=146  Identities=22%  Similarity=0.279  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh--
Q 009674          285 INSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS--  339 (529)
Q Consensus       285 in~~I~~Ai~~A~k~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns--  339 (529)
                      -+.-+..-.+.|++.|++..-  |.       +++.+++||.|.   ++.++.= |++++          .+=|||=+  
T Consensus        46 s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~  125 (278)
T PRK14172         46 SIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFI  125 (278)
T ss_pred             HHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHh
Confidence            333344556778888887753  32       344447788774   3555532 33233          12244432  


Q ss_pred             --------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCcc
Q 009674          340 --------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV  399 (529)
Q Consensus       340 --------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~  399 (529)
                                    -|++.|++=+     +-.-++|+++|...  -||+-+|..|-++|..|++ .++            
T Consensus       126 n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~AtVt~chs~------------  191 (278)
T PRK14172        126 SVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSN--IVGKPVAQLLLNENATVTICHSK------------  191 (278)
T ss_pred             hHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCC------------
Confidence                          3566665543     44678999999997  9999999999999999999 211            


Q ss_pred             ccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCcee
Q 009674          400 EAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY  456 (529)
Q Consensus       400 ~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y  456 (529)
                              ..++++  ++++|+|  +|  +.++++..   ++|+++||+- +++.  ++--|+-+
T Consensus       192 --------T~~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~~~gkl~GDvd~  244 (278)
T PRK14172        192 --------TKNLKEVCKKADILVVAIGRPKFIDEEYV---KEGAIVIDVG-TSSVNGKITGDVNF  244 (278)
T ss_pred             --------CCCHHHHHhhCCEEEEcCCCcCccCHHHc---CCCcEEEEee-ccccCCceeeeccH
Confidence                    012332  3566666  33  35777776   9999999996 5553  45556643

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=90.37  E-value=0.78  Score=44.21  Aligned_cols=29  Identities=24%  Similarity=0.366  Sum_probs=27.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~   31 (245)
T PRK12824          3 KIALVTGAKR--GIGSAIARELLNDGYRVIA   31 (245)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHcCCEEEE
Confidence            4789999998  9999999999999999988

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=90.31  E-value=0.24  Score=51.84  Aligned_cols=66  Identities=17%  Similarity=0.290  Sum_probs=42.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCcccc---ccceeee-ccccc-CcceEEEE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA---QHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~--v~l--~~~~~~~~l~~~~~~~~---~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      +.+|.++|| |  .||+++|..|+.+|..  +.|  .++++.+-...++....   ..+-+.. ++|++ ++++|+|+
T Consensus         3 ~~Ki~IiGa-G--~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvi   77 (312)
T cd05293           3 RNKVTVVGV-G--QVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIV   77 (312)
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEE
Confidence            458999997 8  9999999999966664  444  55565553333322211   1122444 47877 89988775

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK01713 ornithine carbamoyltransferase; Provisional

Probab=90.30  E-value=1.6  Score=46.36  Aligned_cols=163  Identities=15%  Similarity=0.185  Sum_probs=99.2

Q ss_pred             HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++.|+.=    .++|.       |.+..-..+.|+|+         ...++|+.|.+         +=..++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~  147 (334)
T PRK01713         68 AYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVFNGLTDEFHPTQMLADVLTMI  147 (334)
T ss_pred             HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            36899999999743    44454       35556677888886         35789998865         1246676


Q ss_pred             hcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH------HHHhhCccccccceeeec-cccc--Cc
Q 009674          347 NSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE------KLKLRIPVEAQHNLVLST-SYAA--HK  415 (529)
Q Consensus       347 ~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~------~l~~~~~~~~~~~l~~~~-~~~~--~~  415 (529)
                      +...  .+..+|+++|... +.+++..+..|++-|.++.+-.++.|+      +..++...+.+.. +.++ ++++  ++
T Consensus       148 e~~g~~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~  225 (334)
T PRK01713        148 ENCDKPLSEISYVYIGDAR-NNMGNSLLLIGAKLGMDVRICAPKALLPEASLVEMCEKFAKESGAR-ITVTDDIDKAVKG  225 (334)
T ss_pred             HHcCCCcCCcEEEEECCCc-cCHHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCC
Confidence            6543  2456999999973 369999999999999999993333332      1112222223333 3343 7774  78


Q ss_pred             ceEEEEcCcCChhhhhc--CCCCceeecccccCcc--C-C-CCCcee-ecCCc
Q 009674          416 TKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--K-L-RKDCFY-HSTPA  461 (529)
Q Consensus       416 ~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~-~-R~dc~y-~~~~a  461 (529)
                      ++|+..+-|.+-.++..  ...-..|-||. ++.+  + . |+||.+ |.+|+
T Consensus       226 aDvVyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~k~~aivmH~lP~  277 (334)
T PRK01713        226 VDFVHTDVWVSMGEPLETWGERIKLLMPYQ-VTPELMKRTGNPKVKFMHCLPA  277 (334)
T ss_pred             CCEEEEcceeecccchhhHHHHHHhccCCc-CCHHHHhccCCCCCEEECCCCC
Confidence            88877755543211100  00001344553 8887  3 3 578875 77776

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.28  E-value=0.49  Score=49.46  Aligned_cols=139  Identities=18%  Similarity=0.204  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 009674          283 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS  339 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns  339 (529)
                      .+-+.-+...++.|++.|++..  -|-       +++.++++|.|-   |+.++.= |++++          .+=|||=|
T Consensus        44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~  123 (297)
T PRK14186         44 PASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLH  123 (297)
T ss_pred             hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence            3445556667778999998875  443       223336677754   3555422 23233          12244433


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          340 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       340 ----------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                                      -|+.+|++=+     +-.-++|+++|.+.  -||+-+|..|.++|..|++ .++.         
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGkPla~lL~~~~atVtv~hs~T---------  192 (297)
T PRK14186        124 PLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSI--LVGKPLALMLLAANATVTIAHSRT---------  192 (297)
T ss_pred             hhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCC---------
Confidence                            3566666544     33578999999997  9999999999999999998 2111         


Q ss_pred             ccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          398 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                 .++++  +++||+|  +|  +.++++..   ++|+++||+. +.+
T Consensus       193 -----------~~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~  233 (297)
T PRK14186        193 -----------QDLASITREADILVAAAGRPNLIGAEMV---KPGAVVVDVG-IHR  233 (297)
T ss_pred             -----------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence                       12222  3566666  34  34676666   9999999998 554

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=90.18  E-value=0.3  Score=51.80  Aligned_cols=66  Identities=18%  Similarity=0.214  Sum_probs=53.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc--CcceEEE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL  420 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi  420 (529)
                      .....+.||||  =.|.-||++||++|.+-.|  ||.++++.|.++++.+.+..=+-+- .+++  ...+|++
T Consensus         6 e~d~iiYGAtG--y~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVl   76 (382)
T COG3268           6 EYDIIIYGATG--YAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVL   76 (382)
T ss_pred             ceeEEEEcccc--chhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEE
Confidence            45788999999  9999999999999999988  9999999999999998876533211 3333  4557777

>PLN02778 3,5-epimerase/4-reductase

Probab=90.17  E-value=0.43  Score=48.96  Aligned_cols=36  Identities=17%  Similarity=0.197  Sum_probs=31.2

Q ss_pred             hcCcCC-CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          347 NSLPKT-TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       347 ~~i~~~-~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++.|++ +.+|+|+|++|  =||+.+++.|.++|.+|+.
T Consensus         2 ~~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~   38 (298)
T PLN02778          2 NGTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHY   38 (298)
T ss_pred             CCCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            456663 56899999999  9999999999999999975

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=90.15  E-value=0.56  Score=49.47  Aligned_cols=83  Identities=22%  Similarity=0.148  Sum_probs=57.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE--------Ec
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------VG  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------vg  422 (529)
                      .++|-++|.-   .||+++|+.|..-|.+|+..++..-++.......      ....++++  +.+|+++        --
T Consensus       142 gkTvGIiG~G---~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~------~~~~~Ld~lL~~sDiv~lh~PlT~eT~  212 (324)
T COG0111         142 GKTVGIIGLG---RIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGV------VGVDSLDELLAEADILTLHLPLTPETR  212 (324)
T ss_pred             CCEEEEECCC---HHHHHHHHHHHhCCCeEEEECCCCchhhhccccc------eecccHHHHHhhCCEEEEcCCCCcchh
Confidence            5688899977   9999999999999999999333222211111111      12445665  5666654        23


Q ss_pred             CcCChhhhhcCCCCceeecccc
Q 009674          423 DDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       423 ~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                      ..|+.++..+||+|++||-++|
T Consensus       213 g~i~~~~~a~MK~gailIN~aR  234 (324)
T COG0111         213 GLINAEELAKMKPGAILINAAR  234 (324)
T ss_pred             cccCHHHHhhCCCCeEEEECCC
Confidence            4577889999999999999999

>PRK08324 short chain dehydrogenase; Validated

Probab=90.11  E-value=0.58  Score=53.73  Aligned_cols=45  Identities=18%  Similarity=0.177  Sum_probs=39.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++..
T Consensus       422 gk~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~  468 (681)
T PRK08324        422 GKVALVTGAAG--GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG  468 (681)
T ss_pred             CCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence            47899999998  9999999999999999988  888888888777544

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.07  E-value=0.58  Score=48.57  Aligned_cols=161  Identities=22%  Similarity=0.271  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 009674          284 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS-  339 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns-  339 (529)
                      +-+.-+...++.|++.|++..  -|.       +++.+++||.|-   ++.++.= |++++.          +=|||=+ 
T Consensus        44 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~  123 (281)
T PRK14183         44 ASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHP  123 (281)
T ss_pred             HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccCh
Confidence            444455666778899998754  332       333346788773   3555522 332331          2244443 


Q ss_pred             ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCcc
Q 009674          340 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPV  399 (529)
Q Consensus       340 ---------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~  399 (529)
                                     -|++.|++=+     +-.-++|+++|...  -||+-+|..|.++|-.|++ ...+-+        
T Consensus       124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~AtVti-~hs~T~--------  192 (281)
T PRK14183        124 YNVGRLVTGLDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASN--IVGKPMAALLLNANATVDI-CHIFTK--------  192 (281)
T ss_pred             hhhhHHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEE-eCCCCc--------
Confidence                           3667666544     44688999999997  9999999999999999998 111111        


Q ss_pred             ccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCceeec-----CCccccC
Q 009674          400 EAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIP  465 (529)
Q Consensus       400 ~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~~P  465 (529)
                                ++++  +.+||+|  +|  +.++++..   ++|+++||+. +.+.   ++--|+-+.+     ...+.||
T Consensus       193 ----------~l~~~~~~ADIvV~AvGkp~~i~~~~v---k~gavvIDvG-in~~~~gkl~GDVd~~~~~~~a~~iTPVP  258 (281)
T PRK14183        193 ----------DLKAHTKKADIVIVGVGKPNLITEDMV---KEGAIVIDIG-INRTEDGRLVGDVDFENVAKKCSYITPVP  258 (281)
T ss_pred             ----------CHHHHHhhCCEEEEecCcccccCHHHc---CCCcEEEEee-ccccCCCCeECCccHHHHHhhceEecCCC
Confidence                      1221  3555655  34  34666666   9999999998 6652   4445555332     1124566


Q ss_pred             CCCc
Q 009674          466 PSLS  469 (529)
Q Consensus       466 ~~~~  469 (529)
                      +.+-
T Consensus       259 GGVG  262 (281)
T PRK14183        259 GGVG  262 (281)
T ss_pred             CCCh
Confidence            6554

>PRK00779 ornithine carbamoyltransferase; Provisional

Probab=90.05  E-value=1.9  Score=45.09  Aligned_cols=162  Identities=18%  Similarity=0.224  Sum_probs=95.6

Q ss_pred             HHHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHH
Q 009674          295 EADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVV  345 (529)
Q Consensus       295 ~A~k~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv  345 (529)
                      -|.++|.+++.|+.    +.|+|.+       ....-+.+.|+|+         ..++.|+.+-+         +=+.++
T Consensus        64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti  143 (304)
T PRK00779         64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI  143 (304)
T ss_pred             HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence            35789999999964    3334443       4446677888887         34577776543         113445


Q ss_pred             HhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccccceeeec-cccc--CcceE
Q 009674          346 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYAA--HKTKI  418 (529)
Q Consensus       346 ~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~~--~~~~v  418 (529)
                      .+.... +..+|.++|..+  .+.+..+..|.+-|.+|.+-..+.++   .+.+++..+.+.. +.++ ++++  ++++|
T Consensus       144 ~e~~g~l~gl~i~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~aDv  220 (304)
T PRK00779        144 YEHRGSLKGLKVAWVGDGN--NVANSLLLAAALLGFDLRVATPKGYEPDPEIVEKIAKETGAS-IEVTHDPKEAVKGADV  220 (304)
T ss_pred             HHHhCCcCCcEEEEEeCCC--ccHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHcCCe-EEEEcCHHHHhCCCCE
Confidence            444432 346899999965  89999999999999999994443332   1222111222333 3344 7764  88888


Q ss_pred             EEEcCcCChhh---hhcCCCCceeecccccCcc---CCCCCce-eecCCcc
Q 009674          419 WLVGDDLTGKE---QARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM  462 (529)
Q Consensus       419 wivg~~~~~~~---q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~  462 (529)
                      +....|....+   |....  ..+-+| +++.+   ..|+|+. .|.+|+.
T Consensus       221 vy~~~w~~~~~~~~~~~~~--~~~~~y-~v~~~~l~~~~~~~ivmHplP~~  268 (304)
T PRK00779        221 VYTDVWVSMGQEAEAEERL--KAFAPY-QVNEELMALAKPDAIFMHCLPAH  268 (304)
T ss_pred             EEecCccccccchhHHHHH--HHhccc-CCCHHHHHhcCCCeEEecCCCcc
Confidence            88766554321   10000  012223 37766   4567766 4777743

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=90.02  E-value=1.5  Score=43.71  Aligned_cols=88  Identities=14%  Similarity=0.125  Sum_probs=58.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccccCcceEEE--EcCcCCh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VGDDLTG  427 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi--vg~~~~~  427 (529)
                      ....|++.|++|  .+|.++++.+...|.++..  +++++.+.+++ ++...  .+....++.....++++  +|....+
T Consensus       132 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~--~~~~~~~~~~~~~d~vl~~~g~~~~~  206 (305)
T cd08270         132 LGRRVLVTGASG--GVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAE--VVVGGSELSGAPVDLVVDSVGGPQLA  206 (305)
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE--EEeccccccCCCceEEEECCCcHHHH
Confidence            367999999998  9999999999999999877  77888888865 44321  11111111113456666  4444445


Q ss_pred             hhhhcCCCCceeecccc
Q 009674          428 KEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       428 ~~q~~a~~G~~f~~~~~  444 (529)
                      +-.+.++++-+++.+..
T Consensus       207 ~~~~~l~~~G~~v~~g~  223 (305)
T cd08270         207 RALELLAPGGTVVSVGS  223 (305)
T ss_pred             HHHHHhcCCCEEEEEec
Confidence            55567778888888763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK06398 aldose dehydrogenase; Validated

Probab=89.99  E-value=0.34  Score=48.00  Aligned_cols=34  Identities=21%  Similarity=0.274  Sum_probs=29.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |+++
T Consensus         6 gk~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~r~~~   41 (258)
T PRK06398          6 DKVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFDIKEP   41 (258)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCcc
Confidence            36899999998  9999999999999999998  5543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=89.98  E-value=0.42  Score=46.40  Aligned_cols=30  Identities=23%  Similarity=0.320  Sum_probs=27.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|++|  .||+++|+.|+++|.++.+
T Consensus         6 ~~~vlitGasg--~iG~~l~~~l~~~g~~v~~   35 (252)
T PRK06077          6 DKVVVVTGSGR--GIGRAIAVRLAKEGSLVVV   35 (252)
T ss_pred             CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence            36899999998  9999999999999999876

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.93  E-value=0.53  Score=48.93  Aligned_cols=138  Identities=18%  Similarity=0.231  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEE--ecc-------cccccccccCC---ceeeecC-CCCcce------------------
Q 009674          284 AINSLIEEAILEADAKGVKVIS--LGL-------LNQGEELNRNG---EIYLERQ-PNKLKI------------------  332 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~~--LG~-------ln~~e~ln~~g---~~~~~k~-p~~L~i------------------  332 (529)
                      +-+.-++.-++.|++.|++..-  |-.       ++.+++||.|-   |+.++.= |++++.                  
T Consensus        46 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~  125 (284)
T PRK14177         46 ASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTT  125 (284)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCCh
Confidence            3344455566788888887655  322       22336677654   2444421 222331                  


Q ss_pred             ----eeecCC----hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCc
Q 009674          333 ----KVVDGS----SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP  398 (529)
Q Consensus       333 ----rvv~Gn----sltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~  398 (529)
                          |+..|+    .-|++.|++=+.     -.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-          
T Consensus       126 ~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVt~chs~T----------  193 (284)
T PRK14177        126 LSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSP--ILGKPMAMLLTEMNATVTLCHSKT----------  193 (284)
T ss_pred             hhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC----------
Confidence                222332    236666665443     3678999999998  9999999999999999999 2110          


Q ss_pred             cccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          399 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       399 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                .++++  +++||+|  +|  +.++++..   ++|++++|+. +..
T Consensus       194 ----------~~l~~~~~~ADIvIsAvGk~~~i~~~~i---k~gavVIDvG-in~  234 (284)
T PRK14177        194 ----------QNLPSIVRQADIIVGAVGKPEFIKADWI---SEGAVLLDAG-YNP  234 (284)
T ss_pred             ----------CCHHHHHhhCCEEEEeCCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence                      12322  3566666  33  34777766   9999999998 554

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=89.86  E-value=0.52  Score=48.05  Aligned_cols=85  Identities=14%  Similarity=0.199  Sum_probs=56.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcC----
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD----  423 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~----  423 (529)
                      .+|.++|. |  .+|+++|+.|.+.|.+|..  |++++.+.+++. +.      ....++++  ++++++|  +-+    
T Consensus         3 ~~IgviG~-G--~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~------~~~~~~~e~~~~~d~vi~~vp~~~~~   72 (296)
T PRK11559          3 MKVGFIGL-G--IMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GA------ETASTAKAVAEQCDVIITMLPNSPHV   72 (296)
T ss_pred             ceEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------eecCCHHHHHhcCCEEEEeCCCHHHH
Confidence            36899996 5  9999999999999999988  788888777653 10      01224443  5566644  211    


Q ss_pred             --cCChhh--hhcCCCCceeecccccCcc
Q 009674          424 --DLTGKE--QARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       424 --~~~~~~--q~~a~~G~~f~~~~~~~~~  448 (529)
                        .+..++  ...+++|+++++.|.++|.
T Consensus        73 ~~v~~~~~~~~~~~~~g~iiid~st~~~~  101 (296)
T PRK11559         73 KEVALGENGIIEGAKPGTVVIDMSSIAPL  101 (296)
T ss_pred             HHHHcCcchHhhcCCCCcEEEECCCCCHH
Confidence              111111  2346899999999998885

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=89.77  E-value=0.62  Score=48.03  Aligned_cols=30  Identities=17%  Similarity=0.185  Sum_probs=27.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+|+|++|  -||+++++.|.++|.+|..
T Consensus         6 ~~~vlVTGatG--fiG~~l~~~L~~~G~~V~~   35 (340)
T PLN02653          6 RKVALITGITG--QDGSYLTEFLLSKGYEVHG   35 (340)
T ss_pred             CCEEEEECCCC--ccHHHHHHHHHHCCCEEEE
Confidence            35799999999  9999999999999999987

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=89.73  E-value=0.88  Score=48.83  Aligned_cols=151  Identities=15%  Similarity=0.116  Sum_probs=102.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE----EcCcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDL  425 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~  425 (529)
                      .-+.|+|+|=-   .+|+-||..|...|-+|.+..-|....||... .++     ++...++  ...+|.|    .=|.|
T Consensus       208 aGK~vVV~GYG---~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~M-dGf-----~V~~m~~Aa~~gDifiT~TGnkdVi  278 (420)
T COG0499         208 AGKNVVVAGYG---WVGRGIAMRLRGMGARVIVTEVDPIRALEAAM-DGF-----RVMTMEEAAKTGDIFVTATGNKDVI  278 (420)
T ss_pred             cCceEEEeccc---ccchHHHHHhhcCCCeEEEEecCchHHHHHhh-cCc-----EEEEhHHhhhcCCEEEEccCCcCcc
Confidence            45677777765   99999999999999999996666666665552 232     2555553  4557877    45789


Q ss_pred             ChhhhhcCCCCceeecccccCcc--------------CCCCCceeecCCc---c--ccCCCCccccccccccCcchhHHH
Q 009674          426 TGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---M--IIPPSLSNMHSCENWLGRRVMSAW  486 (529)
Q Consensus       426 ~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~--~~P~~~~~~~~~e~~~p~r~~~Ac  486 (529)
                      +.|+.++|+.|++.|-.-.|+-+              +.|+.+.-.+.|.   +  .--+-+-|+. |--+.|..+|+..
T Consensus       279 ~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llaeGRLvNLa-~a~GHPs~VMd~S  357 (420)
T COG0499         279 RKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAEGRLVNLA-AATGHPSEVMDMS  357 (420)
T ss_pred             CHHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEecceeeeec-cCCCCcHHHhhhh
Confidence            99999999999999877654322              2232222111111   1  1122366787 8899999999999


Q ss_pred             HHhhHhhhhcCCCCC---ccch--hhhhHHH
Q 009674          487 RIAGIIHALEGWDLN---ECGQ--TMCDIHQ  512 (529)
Q Consensus       487 ~a~~~v~alEgw~~~---e~G~--iv~~id~  512 (529)
                      +|--.+-+.|=|..+   |-|=  +...+|+
T Consensus       358 FanQaLa~~~L~~n~~~~~~~Vy~lP~~lD~  388 (420)
T COG0499         358 FANQALAQIYLVKNHGKLEPGVYRLPKELDE  388 (420)
T ss_pred             HHHHHHHHHHHHhcccccCCceeeCcHHHHH
Confidence            999998888777766   4443  2355554

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=89.72  E-value=0.51  Score=50.57  Aligned_cols=139  Identities=14%  Similarity=0.170  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEe--ccc-------ccccccccCC---ceeeecC-CCCcce-----------------
Q 009674          283 EAINSLIEEAILEADAKGVKVISL--GLL-------NQGEELNRNG---EIYLERQ-PNKLKI-----------------  332 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~L--G~l-------n~~e~ln~~g---~~~~~k~-p~~L~i-----------------  332 (529)
                      .+-+.-+...++.|++.|++..-.  -.-       +.+++||.|-   |+.++.= |++++.                 
T Consensus       115 paS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl~  194 (364)
T PLN02616        115 KDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFH  194 (364)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence            344555667778899999986543  222       2236778874   3555422 333431                 


Q ss_pred             -----eeecC--C----hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHh
Q 009674          333 -----KVVDG--S----SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKL  395 (529)
Q Consensus       333 -----rvv~G--n----sltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~  395 (529)
                           |+..|  +    .-|++.|++-+.     -.-++|+|+|...  -||+-+|..|.++|-.|++ .++-       
T Consensus       195 p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~--iVGkPLa~LL~~~~ATVTicHs~T-------  265 (364)
T PLN02616        195 PLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRT-------  265 (364)
T ss_pred             hhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCeEEEeCCCC-------
Confidence                 23333  2    446777766553     3688999999997  9999999999999999999 2111       


Q ss_pred             hCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          396 RIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       396 ~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                   .++++  +.+||+|  +|  .-++++..   ++|+++||+- +.+
T Consensus       266 -------------~nl~~~~r~ADIVIsAvGkp~~i~~d~v---K~GAvVIDVG-In~  306 (364)
T PLN02616        266 -------------KNPEEITREADIIISAVGQPNMVRGSWI---KPGAVVIDVG-INP  306 (364)
T ss_pred             -------------CCHHHHHhhCCEEEEcCCCcCcCCHHHc---CCCCEEEecc-ccc
Confidence                         12332  3566766  33  34677766   9999999998 555

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.60  E-value=0.56  Score=49.05  Aligned_cols=139  Identities=19%  Similarity=0.235  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 009674          283 EAINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI-----------------  332 (529)
Q Consensus       283 ~~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i-----------------  332 (529)
                      .+-+.-+...++.|++.|++..-.=         ++..++++|.|-   ++.++.= |++++.                 
T Consensus        45 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~  124 (297)
T PRK14168         45 PASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFH  124 (297)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence            3445556667778888888875431         122236677774   2444421 222331                 


Q ss_pred             -----eeecCC------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHH
Q 009674          333 -----KVVDGS------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYE  391 (529)
Q Consensus       333 -----rvv~Gn------sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~l-~~~~~~~  391 (529)
                           |+..|+      .-|++.|++=+     +-.-++|+|+|.+.  -||+-+|..|.++    +-.|++ .++-   
T Consensus       125 ~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~atVtv~hs~T---  199 (297)
T PRK14168        125 PVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSN--IVGKPIANMMTQKGPGANATVTIVHTRS---  199 (297)
T ss_pred             hhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cccHHHHHHHHhcccCCCCEEEEecCCC---
Confidence                 333443      34666666544     44678999999997  9999999999988    788888 2111   


Q ss_pred             HHHhhCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          392 KLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       392 ~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                       .++++  +++||+|  +|  ..++++..   ++|+++||+. ++.
T Consensus       200 -----------------~~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gavVIDvG-in~  240 (297)
T PRK14168        200 -----------------KNLARHCQRADILIVAAGVPNLVKPEWI---KPGATVIDVG-VNR  240 (297)
T ss_pred             -----------------cCHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEecC-CCc
Confidence                             12332  4566666  34  35777777   9999999998 554

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=89.58  E-value=0.26  Score=49.66  Aligned_cols=34  Identities=29%  Similarity=0.295  Sum_probs=29.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      +|+++|++|  -||+.+++.|.++|.+|..  |+.++.
T Consensus         2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (328)
T TIGR03466         2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLVRPTSDR   37 (328)
T ss_pred             eEEEECCcc--chhHHHHHHHHHCCCEEEEEEecCccc
Confidence            689999999  9999999999999999988  655543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.54  E-value=0.91  Score=47.28  Aligned_cols=138  Identities=17%  Similarity=0.230  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce------------------
Q 009674          284 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------  332 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------  332 (529)
                      +-+.-+....+.|++.|++..-.=         ++..+++||.|-   |+.++.= |++++.                  
T Consensus        39 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p  118 (287)
T PRK14181         39 ASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHP  118 (287)
T ss_pred             HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCCh
Confidence            444556677778899998875442         344447777765   3444421 222321                  


Q ss_pred             ----eeecCC-----hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHH
Q 009674          333 ----KVVDGS-----SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKL  393 (529)
Q Consensus       333 ----rvv~Gn-----sltaavv~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~l-~~~~~~~~l  393 (529)
                          |+..|+     .-|+..|++=     |+-.-++|+++|...  -||+-+|..|.++    +-.|++ .++      
T Consensus       119 ~n~g~l~~g~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~AtVtvchs~------  190 (287)
T PRK14181        119 VNMGKLLLGETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSN--IVGKPLAALLMQKHPDTNATVTLLHSQ------  190 (287)
T ss_pred             hhHHHHhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHhCcCCCCCEEEEeCCC------
Confidence                233343     2366666654     445688999999997  9999999999988    788888 111      


Q ss_pred             HhhCccccccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          394 KLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       394 ~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                    ..++++  +.+||+|  +|  .-++++..   ++|++++|+. +.+
T Consensus       191 --------------T~~l~~~~~~ADIvV~AvG~p~~i~~~~i---k~GavVIDvG-in~  232 (287)
T PRK14181        191 --------------SENLTEILKTADIIIAAIGVPLFIKEEMI---AEKAVIVDVG-TSR  232 (287)
T ss_pred             --------------CCCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence                          112332  4666766  44  34677766   9999999998 554

>PLN00015 protochlorophyllide reductase

Probab=89.51  E-value=0.65  Score=47.55  Aligned_cols=40  Identities=18%  Similarity=0.140  Sum_probs=35.1

Q ss_pred             EEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCc
Q 009674          357 LLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       357 ~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +++|+++  -||+++|+.|+++| .+|.+  |+.++.+++.+++.
T Consensus         1 lITGas~--GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~   43 (308)
T PLN00015          1 IITGASS--GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG   43 (308)
T ss_pred             CEeCCCC--hHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence            4789997  99999999999999 89888  88888888877764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=89.47  E-value=0.37  Score=47.50  Aligned_cols=35  Identities=20%  Similarity=0.309  Sum_probs=30.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  +++++
T Consensus         9 ~k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~~~~~~   45 (266)
T PRK06171          9 GKIIIVTGGSS--GIGLAIVKELLANGANVVNADIHGGD   45 (266)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            46799999998  9999999999999999998  54443

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=89.47  E-value=0.62  Score=48.77  Aligned_cols=138  Identities=17%  Similarity=0.216  Sum_probs=86.7

Q ss_pred             HHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 009674          284 AINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------  332 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------  332 (529)
                      +-+.-+...++.|++.|++.  .-|.       ++..+++||.|-   |+.+..= |++++.                  
T Consensus        52 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~  131 (299)
T PLN02516         52 DSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHP  131 (299)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCH
Confidence            44444556677888888885  4443       223336677774   3544421 221221                  


Q ss_pred             ----eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674          333 ----KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  396 (529)
Q Consensus       333 ----rvv~G--n----sltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~  396 (529)
                          |+..|  +    .-|++.|++=+     +-.-++|+++|.+.  -||+-+|..|.++|-.|++ .++         
T Consensus       132 ~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~--iVGkPla~lL~~~~ATVtvchs~---------  200 (299)
T PLN02516        132 LNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSN--IVGLPVSLLLLKADATVTVVHSR---------  200 (299)
T ss_pred             hhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCC---------
Confidence                33333  1    34667766544     34678999999997  9999999999999999999 221         


Q ss_pred             Cccccccceeeeccccc--CcceEEE--EcC--cCChhhhhcCCCCceeecccccCc
Q 009674          397 IPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       397 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                 ..++++  +++||+|  +|+  .++++..   ++|++++|+. +..
T Consensus       201 -----------T~nl~~~~~~ADIvv~AvGk~~~i~~~~v---k~gavVIDvG-in~  242 (299)
T PLN02516        201 -----------TPDPESIVREADIVIAAAGQAMMIKGDWI---KPGAAVIDVG-TNA  242 (299)
T ss_pred             -----------CCCHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEee-ccc
Confidence                       112332  4566666  343  4555555   9999999998 554

>PRK07574 formate dehydrogenase; Provisional

Probab=89.36  E-value=0.61  Score=50.38  Aligned_cols=99  Identities=12%  Similarity=0.220  Sum_probs=64.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-HHHHhhCccccccceeeeccccc--CcceEEEE-------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-EKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~-~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  421 (529)
                      ..++|.++|.-   .||+++|+.|...|.+|...++.+. ....++.+..      ...++++  ++++++++       
T Consensus       191 ~gktVGIvG~G---~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~------~~~~l~ell~~aDvV~l~lPlt~~  261 (385)
T PRK07574        191 EGMTVGIVGAG---RIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLT------YHVSFDSLVSVCDVVTIHCPLHPE  261 (385)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCce------ecCCHHHHhhcCCEEEEcCCCCHH
Confidence            45679999985   9999999999999999988222211 1111222111      1235554  67777552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecC
Q 009674          422 -GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  459 (529)
Q Consensus       422 -g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~  459 (529)
                       -..++.+....|++|+.||.++|   ++.+         +++   -|++.++-
T Consensus       262 T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV~~~EP  315 (385)
T PRK07574        262 TEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFPQP  315 (385)
T ss_pred             HHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEecCCCCC
Confidence             23456788999999999999999   4433         444   57777664

>PRK13243 glyoxylate reductase; Reviewed

Probab=89.29  E-value=0.71  Score=48.65  Aligned_cols=97  Identities=8%  Similarity=0.087  Sum_probs=64.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      ..++|.++|- |  .||+.+|+.|...|.+|..  |+.+...  ..+..       +...++++  ++++++++      
T Consensus       149 ~gktvgIiG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~-------~~~~~l~ell~~aDiV~l~lP~t~  216 (333)
T PRK13243        149 YGKTIGIIGF-G--RIGQAVARRAKGFGMRILYYSRTRKPEA--EKELG-------AEYRPLEELLRESDFVSLHVPLTK  216 (333)
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcC-------CEecCHHHHHhhCCEEEEeCCCCh
Confidence            4678999998 5  9999999999999999988  3332211  11111       11224554  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecCC
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP  460 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~  460 (529)
                        -..++.+....|++|++++.++|   ++.+         +++   -|++..+-+
T Consensus       217 ~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~~~EP~  272 (333)
T PRK13243        217 ETYHMINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEEEPY  272 (333)
T ss_pred             HHhhccCHHHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccCCCCCC
Confidence              23456688899999999999999   4443         222   488877643

>PLN02928 oxidoreductase family protein

Probab=89.18  E-value=0.89  Score=48.28  Aligned_cols=94  Identities=14%  Similarity=0.128  Sum_probs=59.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccce----eeeccccc--CcceEEEE--
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL----VLSTSYAA--HKTKIWLV--  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l----~~~~~~~~--~~~~vwiv--  421 (529)
                      ..++|.++|.-   .||+++|+.|...|.+|+.  |+.++-..-...++.+.-..+    ....++++  +.+|++++  
T Consensus       158 ~gktvGIiG~G---~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        158 FGKTVFILGYG---AIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            35789999985   9999999999999999988  332211100000000000000    01225554  67777663  


Q ss_pred             ------cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674          422 ------GDDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       422 ------g~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                            -..|+.++..+||+|+++|.++|   |+.+
T Consensus       235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~  270 (347)
T PLN02928        235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYD  270 (347)
T ss_pred             CCChHhhcccCHHHHhcCCCCeEEEECCCccccCHH
Confidence                  34677889999999999999999   5544

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=89.13  E-value=0.45  Score=50.33  Aligned_cols=31  Identities=16%  Similarity=0.195  Sum_probs=29.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..++|+|+|+||  -||+++|+.|.++|.+|+.
T Consensus        20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~   50 (370)
T PLN02695         20 EKLRICITGAGG--FIASHIARRLKAEGHYIIA   50 (370)
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEE
Confidence            577899999999  9999999999999999987

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=89.00  E-value=0.46  Score=49.13  Aligned_cols=29  Identities=10%  Similarity=0.184  Sum_probs=25.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+|+|+||  -||+++++.|+++|.+++.
T Consensus         2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v~   30 (355)
T PRK10217          2 RKILITGGAG--FIGSALVRYIINETSDAVV   30 (355)
T ss_pred             cEEEEEcCCc--HHHHHHHHHHHHcCCCEEE
Confidence            4799999999  9999999999999977543

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=88.91  E-value=0.68  Score=48.56  Aligned_cols=121  Identities=17%  Similarity=0.212  Sum_probs=82.8

Q ss_pred             cceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee
Q 009674          330 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL  407 (529)
Q Consensus       330 L~irvv~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~  407 (529)
                      .+-|++.+.+.   ....+++...++|=++|=-   -.|++.|.-|-+.|.+|++  |++++.++|++.=.+-.     .
T Consensus        15 ~~~~~~~~~~~---~~s~~~~~s~~~iGFIGLG---~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~-----~   83 (327)
T KOG0409|consen   15 FSRRLVKASET---AMSSRITPSKTRIGFIGLG---NMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVA-----N   83 (327)
T ss_pred             hcccccccccc---cccccCCcccceeeEEeec---cchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhh-----C
Confidence            44566666666   5566676677788888754   7899999999999999999  99999999987722211     1


Q ss_pred             ec-ccccCcceE--EEEcCcCChhhhhc--------CCCCcee-ecccccCcc-------CCC-CCceeecCCcc
Q 009674          408 ST-SYAAHKTKI--WLVGDDLTGKEQAR--------APKGTIF-IPYTQIPPR-------KLR-KDCFYHSTPAM  462 (529)
Q Consensus       408 ~~-~~~~~~~~v--wivg~~~~~~~q~~--------a~~G~~f-~~~~~~~~~-------~~R-~dc~y~~~~a~  462 (529)
                      .. ++. +++|+  -+|++....+|..-        .++|-.. +|-|-++|.       +.+ ++|.|.+.|+-
T Consensus        84 sPaeVa-e~sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVS  157 (327)
T KOG0409|consen   84 SPAEVA-EDSDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVS  157 (327)
T ss_pred             CHHHHH-hhcCEEEEEcCChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEecccc
Confidence            11 222 34444  44666666665433        2344444 888888887       233 99999999974

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=88.86  E-value=0.68  Score=48.89  Aligned_cols=103  Identities=17%  Similarity=0.166  Sum_probs=72.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cccc--CcceEEE------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYAA--HKTKIWL------  420 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~~~~--~~~~vwi------  420 (529)
                      .++|.+.|.-   -+|.--|+...--|-+|++  +|-+|+..|...-...  .....++  ++++  ..+|++|      
T Consensus       168 ~~kv~iiGGG---vvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~r--v~~~~st~~~iee~v~~aDlvIgaVLIp  242 (371)
T COG0686         168 PAKVVVLGGG---VVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGR--VHTLYSTPSNIEEAVKKADLVIGAVLIP  242 (371)
T ss_pred             CccEEEECCc---cccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCce--eEEEEcCHHHHHHHhhhccEEEEEEEec
Confidence            4578888876   7899999999999999999  8999999887773332  1112344  5554  4445544      


Q ss_pred             ---EcCcCChhhhhcCCCCceeecccccCcc----CCC----CCceeecCCc
Q 009674          421 ---VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLR----KDCFYHSTPA  461 (529)
Q Consensus       421 ---vg~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R----~dc~y~~~~a  461 (529)
                         .=+-++.|.+++|+||++.+|++ +|.-    ..|    +|=+|.+-+.
T Consensus       243 gakaPkLvt~e~vk~MkpGsVivDVA-iDqGGc~Et~~~TTh~~PtY~~~gv  293 (371)
T COG0686         243 GAKAPKLVTREMVKQMKPGSVIVDVA-IDQGGCFETSHPTTHDDPTYEVDGV  293 (371)
T ss_pred             CCCCceehhHHHHHhcCCCcEEEEEE-EcCCCceeccccccCCCCceeecCE
Confidence               22456778899999999999999 7665    223    5555655554

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=88.83  E-value=0.65  Score=51.78  Aligned_cols=92  Identities=14%  Similarity=0.169  Sum_probs=57.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc--------ccc--------ccceeeec-cccc-
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP--------VEA--------QHNLVLST-SYAA-  413 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~--------~~~--------~~~l~~~~-~~~~-  413 (529)
                      ++|.|+|+-   .+|+.||..|++.|.+|++  ++++.+++..+++.        .+.        ....+..+ ++++ 
T Consensus         6 ~kV~VIGaG---~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~l   82 (503)
T TIGR02279         6 VTVAVIGAG---AMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHAL   82 (503)
T ss_pred             cEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHHh
Confidence            469999994   9999999999999999999  88888775432211        110        01112233 7766 


Q ss_pred             CcceEEE--EcCcCChhhh------hcCCCCceee-cccccCcc
Q 009674          414 HKTKIWL--VGDDLTGKEQ------ARAPKGTIFI-PYTQIPPR  448 (529)
Q Consensus       414 ~~~~vwi--vg~~~~~~~q------~~a~~G~~f~-~~~~~~~~  448 (529)
                      ++++++|  |-+.++-++.      ..+|++++++ .-|-+++.
T Consensus        83 ~~aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTStl~i~  126 (503)
T TIGR02279        83 ADAGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSSLSIT  126 (503)
T ss_pred             CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence            7887766  3222222221      2468888876 45545544

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=88.83  E-value=0.65  Score=49.47  Aligned_cols=82  Identities=17%  Similarity=0.159  Sum_probs=59.1

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc
Q 009674          340 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  413 (529)
Q Consensus       340 ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  413 (529)
                      -|++.|++=+     +-.-++|+|+|...  -||+-+|..|.++|-.|++ .++-                    .++++
T Consensus       196 CTp~avi~LL~~~~i~l~GK~vvVIGRS~--iVGkPla~LL~~~~ATVTicHs~T--------------------~nl~~  253 (345)
T PLN02897        196 CTPKGCVELLIRSGVEIAGKNAVVIGRSN--IVGLPMSLLLQRHDATVSTVHAFT--------------------KDPEQ  253 (345)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCEEEEEcCCC--------------------CCHHH
Confidence            4666666544     44688999999997  9999999999999999999 2111                    12222


Q ss_pred             --CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCc
Q 009674          414 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       414 --~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                        +++||+|  +|  ..++++..   ++|+++||+. +.+
T Consensus       254 ~~~~ADIvIsAvGkp~~v~~d~v---k~GavVIDVG-in~  289 (345)
T PLN02897        254 ITRKADIVIAAAGIPNLVRGSWL---KPGAVVIDVG-TTP  289 (345)
T ss_pred             HHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence              3566766  33  34677766   9999999998 655

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=88.81  E-value=0.65  Score=53.47  Aligned_cols=45  Identities=16%  Similarity=0.207  Sum_probs=38.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++.
T Consensus       413 ~gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~  459 (676)
T TIGR02632       413 ARRVAFVTGGAG--GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN  459 (676)
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888877776644

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=88.75  E-value=0.94  Score=45.21  Aligned_cols=114  Identities=13%  Similarity=0.149  Sum_probs=64.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcE---EEe--cc----hhhH---HHHHhhCccccccceeeecccc-c-Ccce
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIK---VAT--IC----KDDY---EKLKLRIPVEAQHNLVLSTSYA-A-HKTK  417 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~---v~l--~~----~~~~---~~l~~~~~~~~~~~l~~~~~~~-~-~~~~  417 (529)
                      ...+|++.||-   ..|++||..|.+.|++   +.+  |+    ++|-   ...|+++.++....-.. .++. + .+++
T Consensus        24 ~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~-~~l~~~l~~~d   99 (226)
T cd05311          24 EEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTG-GTLKEALKGAD   99 (226)
T ss_pred             cCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCccc-CCHHHHHhcCC
Confidence            46799999995   8999999999999985   767  55    3442   22222221111100011 1443 3 5677


Q ss_pred             EEEE---cCcCChhhhhcCCCCceeecccccCcc-----CC-CCCc-eeecCCccccCCCCccc
Q 009674          418 IWLV---GDDLTGKEQARAPKGTIFIPYTQIPPR-----KL-RKDC-FYHSTPAMIIPPSLSNM  471 (529)
Q Consensus       418 vwiv---g~~~~~~~q~~a~~G~~f~~~~~~~~~-----~~-R~dc-~y~~~~a~~~P~~~~~~  471 (529)
                      ++|-   .-.++++..+.|.++.++.|.+ -|..     +. +..| ++.++..| +|.--+|+
T Consensus       100 vlIgaT~~G~~~~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~-~~~Q~nn~  161 (226)
T cd05311         100 VFIGVSRPGVVKKEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSD-FPNQVNNV  161 (226)
T ss_pred             EEEeCCCCCCCCHHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCC-Ccccccee
Confidence            7662   2236678887777777666887 3322     12 2467 46666444 44444444

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK08309 short chain dehydrogenase; Provisional

Probab=88.58  E-value=0.63  Score=44.73  Aligned_cols=41  Identities=24%  Similarity=0.344  Sum_probs=33.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .|+++|+||  -+ .++++.|+++|.+|.+  |++++.+.++.+++
T Consensus         2 ~vlVtGGtG--~g-g~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~   44 (177)
T PRK08309          2 HALVIGGTG--ML-KRVSLWLCEKGFHVSVIARREVKLENVKREST   44 (177)
T ss_pred             EEEEECcCH--HH-HHHHHHHHHCcCEEEEEECCHHHHHHHHHHhh
Confidence            589999986  55 5599999999999988  88888888876554

>PRK12562 ornithine carbamoyltransferase subunit F; Provisional

Probab=88.55  E-value=2.1  Score=45.42  Aligned_cols=164  Identities=18%  Similarity=0.210  Sum_probs=101.7

Q ss_pred             HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++.|+.=    .++|.       |.+..-..+.|+|+         ..+++|+.+-|         +=+.++.
T Consensus        67 ~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~  146 (334)
T PRK12562         67 AYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQ  146 (334)
T ss_pred             HHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHhCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            46799999999643    33343       45566677888876         35688888754         1245666


Q ss_pred             hcCc---CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCccccccceeeec-cccc--C
Q 009674          347 NSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLST-SYAA--H  414 (529)
Q Consensus       347 ~~i~---~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~---~~~~~~~~~l~~~~-~~~~--~  414 (529)
                      +...   -+..+|+++|... +.+++..+..+++-|.++.+-..+.|+   ++.+   +...+.+.+ +.++ ++++  +
T Consensus       147 e~~g~~~l~gl~va~vGD~~-~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~  224 (334)
T PRK12562        147 EHLPGKAFNEMTLVYAGDAR-NNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECSALAQKHGGK-ITLTEDIAAGVK  224 (334)
T ss_pred             HHhCCCCcCCcEEEEECCCC-CCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHHHHHHHcCCe-EEEEcCHHHHhC
Confidence            6553   2357999999863 468999999888999999983333321   1111   112222333 3344 7764  8


Q ss_pred             cceEEEEcCcCChhhhhc--CCCCceeecccccCcc--CC--CCCcee-ecCCcc
Q 009674          415 KTKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--KL--RKDCFY-HSTPAM  462 (529)
Q Consensus       415 ~~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~~--R~dc~y-~~~~a~  462 (529)
                      +++|+..+.|.+..+|..  ...-..|-+| |++++  +.  |+||.+ |.+|+.
T Consensus       225 ~aDvvyt~~w~sm~~~~~~~~~~~~~~~~y-~v~~ell~~a~~~~~i~mHcLP~~  278 (334)
T PRK12562        225 GADFIYTDVWVSMGEPKEKWAERIALLRGY-QVNSKMMALTGNPQVKFLHCLPAF  278 (334)
T ss_pred             CCCEEEEcCccccccchhhHHHHHHhccCC-cCCHHHHHhhcCCCCEEECCCCCC
Confidence            889888877765443311  0111245566 48888  32  688875 788873

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=88.54  E-value=1.8  Score=45.28  Aligned_cols=101  Identities=14%  Similarity=0.113  Sum_probs=61.7

Q ss_pred             ChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---c
Q 009674          338 SSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---S  410 (529)
Q Consensus       338 nsltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~---~  410 (529)
                      +.+||+..+...  .+....|++.|++|  -||.++++.+...|.+|..  +++++.+.++++++.+.   .+...   +
T Consensus       142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG--~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~---vi~~~~~~~  216 (348)
T PLN03154        142 AGFTAYAGFYEVCSPKKGDSVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYKEEPD  216 (348)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE---EEECCCccc
Confidence            445555555332  23457899999998  9999999988899999876  77888888876555422   11111   1


Q ss_pred             cc----c---CcceEEE--EcCcCChhhhhcCCCCceeeccc
Q 009674          411 YA----A---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       411 ~~----~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                      +.    +   ...++++  +|.....+-...+.+|-.++-+.
T Consensus       217 ~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G  258 (348)
T PLN03154        217 LDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCG  258 (348)
T ss_pred             HHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEEC
Confidence            11    1   1345555  44333334444566666666665

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=88.50  E-value=0.65  Score=47.47  Aligned_cols=28  Identities=25%  Similarity=0.300  Sum_probs=26.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +|+|+|+||  -||+++|+.|.++|.+|++
T Consensus         2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~   29 (338)
T PRK10675          2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVI   29 (338)
T ss_pred             eEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence            589999999  9999999999999999987

>PRK02255 putrescine carbamoyltransferase; Provisional

Probab=88.45  E-value=4.9  Score=42.76  Aligned_cols=162  Identities=20%  Similarity=0.217  Sum_probs=95.4

Q ss_pred             HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 009674          296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gnsl---------taavv~  346 (529)
                      +.++|.+++.|+.=    +++|.       |+...-+.+.|++.         ..+++|+.|.+=         =..++.
T Consensus        64 ~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~  143 (338)
T PRK02255         64 MTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRLVDIIMARVDRHQTVVELAKYATVPVINGMSDYNHPTQELGDLFTMI  143 (338)
T ss_pred             HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCcEEEEecCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            46799999999643    23333       34444466666654         345788877652         245666


Q ss_pred             hcCc----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeec-cccc-
Q 009674          347 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYAA-  413 (529)
Q Consensus       347 ~~i~----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~~-~~~~-  413 (529)
                      +..+    -+..+|.++|..+  .+.+..+..|++-|.+|.+-..+.|       +.+++.+ ..++.. +.++ ++++ 
T Consensus       144 e~~g~g~~l~glkv~~vGD~~--~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~-~~~g~~-~~~~~d~~ea  219 (338)
T PRK02255        144 EHLPEGKKLEDCKVVFVGDAT--QVCVSLMFIATKMGMDFVHFGPKGYQLPEEHLAIAEENC-EVSGGS-VLVTDDVDEA  219 (338)
T ss_pred             HHhCCCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCEEEEECCCccccCHHHHHHHHHHH-HhcCCe-EEEEcCHHHH
Confidence            6653    2356999999975  8999999999999999999333322       2222221 122233 3344 7764 


Q ss_pred             -CcceEEEEcCcCChhhhhcCC-C-Cceeec-ccccCcc---CCCCCce-eecCCcc
Q 009674          414 -HKTKIWLVGDDLTGKEQARAP-K-GTIFIP-YTQIPPR---KLRKDCF-YHSTPAM  462 (529)
Q Consensus       414 -~~~~vwivg~~~~~~~q~~a~-~-G~~f~~-~~~~~~~---~~R~dc~-y~~~~a~  462 (529)
                       ++++|+..+-|.+...|...+ + =..|.| | |++.+   ..++||. .|.+|+-
T Consensus       220 v~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y-~v~~ell~~a~~~~ivmHpLP~~  275 (338)
T PRK02255        220 VKDADFVYTDVWYGLYDAELSEEERMAIFYPKY-QVTPELMAKAGPHAKFMHCLPAT  275 (338)
T ss_pred             hCCCCEEEEcccHhhccchhhHHHHHHhhCCCc-eECHHHHhccCCCCEEeCCCCCc
Confidence             788887775555211110000 0 012233 4 48877   5568887 4888863

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=88.41  E-value=0.73  Score=47.06  Aligned_cols=40  Identities=25%  Similarity=0.307  Sum_probs=34.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ++|.++|+.   .+|+++|..|++.|.+|++  ++++.+++.++.
T Consensus         4 ~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (287)
T PRK08293          4 KNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKER   45 (287)
T ss_pred             cEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            579999985   9999999999999999999  788877776654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=88.33  E-value=0.8  Score=44.99  Aligned_cols=40  Identities=15%  Similarity=0.179  Sum_probs=35.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +|.++|++|  .+|+++|+.|++.|.+|.+  |++++.++++++
T Consensus         2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            588999888  9999999999999999888  888888888765

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=88.32  E-value=1  Score=47.41  Aligned_cols=86  Identities=10%  Similarity=0.063  Sum_probs=53.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-------------cccccceeeeccccc--C
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQHNLVLSTSYAA--H  414 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~-------------~~~~~~l~~~~~~~~--~  414 (529)
                      +-++|.|+|+-   -+|+.+|..+++.|.+|++  ++.+..+.+++.+.             ......+-..+++++  +
T Consensus         6 ~i~~VaVIGaG---~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~   82 (321)
T PRK07066          6 DIKTFAAIGSG---VIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVA   82 (321)
T ss_pred             CCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhc
Confidence            44689999985   8999999999999999999  66666555443221             111122123347764  7


Q ss_pred             cceEEE--EcCcCChhh------hhcCCCCceee
Q 009674          415 KTKIWL--VGDDLTGKE------QARAPKGTIFI  440 (529)
Q Consensus       415 ~~~vwi--vg~~~~~~~------q~~a~~G~~f~  440 (529)
                      +++++|  |-+.++-+.      ...+|+++++.
T Consensus        83 ~aDlViEavpE~l~vK~~lf~~l~~~~~~~aIla  116 (321)
T PRK07066         83 DADFIQESAPEREALKLELHERISRAAKPDAIIA  116 (321)
T ss_pred             CCCEEEECCcCCHHHHHHHHHHHHHhCCCCeEEE
Confidence            887766  222222111      13579998665

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=88.26  E-value=1.3  Score=37.09  Aligned_cols=30  Identities=27%  Similarity=0.361  Sum_probs=25.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l  384 (529)
                      ..+++.++|+ |  .+|+.++++|++. +.++.+
T Consensus        22 ~~~~v~i~G~-G--~~g~~~a~~l~~~~~~~v~v   52 (86)
T cd05191          22 KGKTVVVLGA-G--EVGKGIAKLLADEGGKKVVL   52 (86)
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEE
Confidence            4678999999 7  9999999999987 667777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=88.00  E-value=0.7  Score=50.86  Aligned_cols=66  Identities=17%  Similarity=0.186  Sum_probs=45.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-------Cc--EEEe--cchhhHHHHHhhCccccc---cceeeec--cccc-Cc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQM-------GI--KVAT--ICKDDYEKLKLRIPVEAQ---HNLVLST--SYAA-HK  415 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~-------~~--~v~l--~~~~~~~~l~~~~~~~~~---~~l~~~~--~~~~-~~  415 (529)
                      .-+|.++||+|  .||+++|..|+.+       ++  ++.+  +++++.+-...++.....   .+ +.++  +|++ ++
T Consensus       100 ~~KV~IIGAaG--~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~-v~i~~~~ye~~kd  176 (444)
T PLN00112        100 LINVAVSGAAG--MISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLRE-VSIGIDPYEVFQD  176 (444)
T ss_pred             CeEEEEECCCc--HHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCc-eEEecCCHHHhCc
Confidence            45899999998  9999999999977       66  4555  788877755555433220   12 3333  7776 88


Q ss_pred             ceEEEE
Q 009674          416 TKIWLV  421 (529)
Q Consensus       416 ~~vwiv  421 (529)
                      ++|+|+
T Consensus       177 aDiVVi  182 (444)
T PLN00112        177 AEWALL  182 (444)
T ss_pred             CCEEEE
Confidence            887663

>PRK02102 ornithine carbamoyltransferase; Validated

Probab=87.90  E-value=6.5  Score=41.76  Aligned_cols=163  Identities=18%  Similarity=0.152  Sum_probs=96.7

Q ss_pred             HHHcCCcEEEeccc----cccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~l----n~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++-|+.=    .++|.+       .+..-..+.|+|+         ..+++|+.+-+         +=+.++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~  147 (331)
T PRK02102         68 AIDLGAHVTYLGPNDSQLGKKESIEDTARVLGRMYDGIEYRGFKQEIVEELAKYSGVPVWNGLTDEWHPTQMLADFMTMK  147 (331)
T ss_pred             HHHcCCCEEEcCcccccCCCCcCHHHHHHHHhhcCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            45899999998753    344554       5566677888887         24677877644         1234555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHH---HH---hhCccccccceeeec-cccc--Ccc
Q 009674          347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LK---LRIPVEAQHNLVLST-SYAA--HKT  416 (529)
Q Consensus       347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~---l~---~~~~~~~~~~l~~~~-~~~~--~~~  416 (529)
                      +.... +..+|+++|... +.+.+..+..|++-|.+|.+-.++.|+.   +.   ++.....+.. +.++ ++++  +++
T Consensus       148 e~~g~l~g~~va~vGd~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~ea~~~a  225 (331)
T PRK02102        148 EHFGPLKGLKLAYVGDGR-NNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREIAKETGAK-ITITEDPEEAVKGA  225 (331)
T ss_pred             HHhCCCCCCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence            54432 457999999973 3689999999999999998833333321   11   1111222333 3344 7764  788


Q ss_pred             eEEEEcCcCChhhhh-cCCCCceeecccccCcc--C--CCCCce-eecCCc
Q 009674          417 KIWLVGDDLTGKEQA-RAPKGTIFIPYTQIPPR--K--LRKDCF-YHSTPA  461 (529)
Q Consensus       417 ~vwivg~~~~~~~q~-~a~~G~~f~~~~~~~~~--~--~R~dc~-y~~~~a  461 (529)
                      +|+..+.|.+-.+.. +...-..+-+| |++.+  +  .++||. .|.+|+
T Consensus       226 Dvvyt~~w~~~~~~~~~~~~~~~~~~y-~vt~ell~~~~~~d~ivmH~lP~  275 (331)
T PRK02102        226 DVIYTDVWVSMGEEDEWEERIKLLKPY-QVNMDLMKATGNPDVIFMHCLPA  275 (331)
T ss_pred             CEEEEcCcccCccccchHHHHHhccCC-cCCHHHHhhhcCCCCEEECCCCC
Confidence            887776554311100 00011223445 38887  4  368887 477776

>PLN02240 UDP-glucose 4-epimerase

Probab=87.74  E-value=0.89  Score=46.77  Aligned_cols=29  Identities=21%  Similarity=0.288  Sum_probs=27.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+++|+||  -||+++++.|.++|.+|+.
T Consensus         6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~   34 (352)
T PLN02240          6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVV   34 (352)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEE
Confidence            5799999999  9999999999999999987

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=87.66  E-value=0.92  Score=46.76  Aligned_cols=102  Identities=13%  Similarity=0.080  Sum_probs=64.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCc-CCh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD-LTG  427 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~-~~~  427 (529)
                      +|.++|. |  .+|.++|+.|.+.|.+|.+  |++++.+.++++-.... .   ...++.+  +++++++  +-+. +++
T Consensus         2 ~Ig~IGl-G--~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~-~---s~~~~~~~~~~~dvIi~~vp~~~~~~   74 (298)
T TIGR00872         2 QLGLIGL-G--RMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV-A---NLRELSQRLSAPRVVWVMVPHGIVDA   74 (298)
T ss_pred             EEEEEcc-h--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc-C---CHHHHHhhcCCCCEEEEEcCchHHHH
Confidence            5889996 5  9999999999999999998  89999998887521111 0   0112221  3455543  2111 111


Q ss_pred             --hh-hhcCCCCceeecccccCccCC--------CCCceeecCCccc
Q 009674          428 --KE-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMI  463 (529)
Q Consensus       428 --~~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~  463 (529)
                        ++ ....++|.++++.+-.+|...        ++.+.|.+.|.+-
T Consensus        75 v~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsG  121 (298)
T TIGR00872        75 VLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSG  121 (298)
T ss_pred             HHHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCC
Confidence              12 223578999999987665511        1456688877654

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=87.63  E-value=0.97  Score=48.73  Aligned_cols=45  Identities=18%  Similarity=0.303  Sum_probs=37.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c--chhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~--~~~~~~~l~~~~~  398 (529)
                      ..+.|+++|++|  -||+++|++|+++|.+|++  +  +.++++++.++++
T Consensus       209 ~g~~vlItGasg--gIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~  257 (450)
T PRK08261        209 AGKVALVTGAAR--GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG  257 (450)
T ss_pred             CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence            457899999998  9999999999999999998  3  3466777766654

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=87.58  E-value=0.48  Score=49.26  Aligned_cols=101  Identities=21%  Similarity=0.207  Sum_probs=67.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCccccccceeeecccc-c-CcceEEE--------E
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--------V  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~-~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--------v  421 (529)
                      +|.++|--   ..|...|.-|-+.|.+|.+  |++++ .+.++++ +...      ..+.. + +.++++|        |
T Consensus         2 kIafIGLG---~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~-Ga~~------a~s~~eaa~~aDvVitmv~~~~~V   71 (286)
T COG2084           2 KIAFIGLG---IMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAA-GATV------AASPAEAAAEADVVITMLPDDAAV   71 (286)
T ss_pred             eEEEEcCc---hhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHc-CCcc------cCCHHHHHHhCCEEEEecCCHHHH
Confidence            57888865   8999999999999999999  88787 5555553 2221      11122 2 4455544        3


Q ss_pred             cCcCCh--hhhhcCCCCceeecccccCccCCC--------CCceeecCCccccC
Q 009674          422 GDDLTG--KEQARAPKGTIFIPYTQIPPRKLR--------KDCFYHSTPAMIIP  465 (529)
Q Consensus       422 g~~~~~--~~q~~a~~G~~f~~~~~~~~~~~R--------~dc~y~~~~a~~~P  465 (529)
                      .+.+..  .=...++||++|||.|-++|...|        +-+.|.+-|++--+
T Consensus        72 ~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~  125 (286)
T COG2084          72 RAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGV  125 (286)
T ss_pred             HHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCc
Confidence            333332  123357899999999999998221        66778888886533

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=87.48  E-value=0.72  Score=45.06  Aligned_cols=39  Identities=21%  Similarity=0.307  Sum_probs=30.0

Q ss_pred             cccCchhhHHHHHHHHhccCcEEEe--cchhh----HHHHHhhCc
Q 009674          360 GTVTANKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIP  398 (529)
Q Consensus       360 Gatg~~kig~ava~~L~~~~~~v~l--~~~~~----~~~l~~~~~  398 (529)
                      |++..+-||++||+.|+++|.+|++  |++++    ++++.++.+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~   45 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG   45 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC
Confidence            4552238999999999999999999  77777    556665544

...

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.39  E-value=1  Score=47.19  Aligned_cols=138  Identities=22%  Similarity=0.298  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh-
Q 009674          284 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS-  339 (529)
Q Consensus       284 ~in~~I~~Ai~~A~k~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns-  339 (529)
                      +-+.-+....+.|++.|++..  -|.       +++.++++|.|-   ++.+..= |++++          .+=|||=+ 
T Consensus        44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~  123 (297)
T PRK14167         44 ASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHP  123 (297)
T ss_pred             HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCCh
Confidence            344446666778888888764  333       333446778774   4555522 22233          12244443 


Q ss_pred             ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHHH
Q 009674          340 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLK  394 (529)
Q Consensus       340 ---------------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~l-~~~~~~~~l~  394 (529)
                                     -|+..|++=+     +-.-++|+++|...  -||+-+|..|.++    +..|++ .++-      
T Consensus       124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T------  195 (297)
T PRK14167        124 ENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSD--IVGKPMANLLIQKADGGNATVTVCHSRT------  195 (297)
T ss_pred             hhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--ccHHHHHHHHhcCccCCCCEEEEeCCCC------
Confidence                           3666666544     44678999999997  9999999999987    788888 2111      


Q ss_pred             hhCccccccceeeeccccc--CcceEEEE--cC--cCChhhhhcCCCCceeecccccCc
Q 009674          395 LRIPVEAQHNLVLSTSYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       395 ~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                                    .++++  +.++|+|+  |+  .++++..   ++|+++||+. +.+
T Consensus       196 --------------~~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gaiVIDvG-in~  236 (297)
T PRK14167        196 --------------DDLAAKTRRADIVVAAAGVPELIDGSML---SEGATVIDVG-INR  236 (297)
T ss_pred             --------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence                          12222  35667663  53  5777766   9999999998 555

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=87.35  E-value=1.6  Score=47.02  Aligned_cols=39  Identities=18%  Similarity=0.306  Sum_probs=34.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +|+++|+ |  .+|+++|+.|.++|.++.+  +++++.++++++
T Consensus         2 ~viIiG~-G--~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~   42 (453)
T PRK09496          2 KIIIVGA-G--QVGYTLAENLSGENNDVTVIDTDEERLRRLQDR   42 (453)
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh
Confidence            6899998 6  9999999999999999998  788899888763

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=87.30  E-value=2.1  Score=46.10  Aligned_cols=110  Identities=19%  Similarity=0.305  Sum_probs=71.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--cc-----------ccceeeeccccc--Ccce
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYAA--HKTK  417 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~--~~-----------~~~l~~~~~~~~--~~~~  417 (529)
                      +|.++|..   .+|.++|..|++.|.+|+.  +++++.+.|++....  +.           ..++...+++++  ++++
T Consensus         2 kI~vIGlG---~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad   78 (411)
T TIGR03026         2 KIAVIGLG---YVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD   78 (411)
T ss_pred             EEEEECCC---chhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence            58899975   9999999999999999999  888999988764211  00           112222336653  5665


Q ss_pred             EEE--EcCcCCh-------------hhh-hcCCCCceeecccccCcc---CC-------------CCCceeecCCccccC
Q 009674          418 IWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-------------RKDCFYHSTPAMIIP  465 (529)
Q Consensus       418 vwi--vg~~~~~-------------~~q-~~a~~G~~f~~~~~~~~~---~~-------------R~dc~y~~~~a~~~P  465 (529)
                      ++|  |++...+             ++. ..+++|++++.-|-+||.   ++             ..||.+..+|..-.|
T Consensus        79 vvii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~  158 (411)
T TIGR03026        79 VIIICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLRE  158 (411)
T ss_pred             EEEEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCC
Confidence            543  6654321             111 235889999998877776   11             135666777766666


Q ss_pred             CC
Q 009674          466 PS  467 (529)
Q Consensus       466 ~~  467 (529)
                      +.
T Consensus       159 G~  160 (411)
T TIGR03026       159 GN  160 (411)
T ss_pred             CC
Confidence            65

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=87.07  E-value=1  Score=45.12  Aligned_cols=44  Identities=18%  Similarity=0.288  Sum_probs=39.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+|+++|.++  -||++.|..+.+.|-+|++  |+++++++.+++.|.
T Consensus         6 nTiLITGG~s--GIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~   51 (245)
T COG3967           6 NTILITGGAS--GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE   51 (245)
T ss_pred             cEEEEeCCcc--hhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence            3679998875  8999999999999999999  999999999998665

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=87.05  E-value=1.1  Score=44.71  Aligned_cols=28  Identities=11%  Similarity=0.173  Sum_probs=25.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC--cEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMG--IKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~l  384 (529)
                      +|+++|+||  .||+++++.|.++|  .+|+.
T Consensus         1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~   30 (317)
T TIGR01181         1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIV   30 (317)
T ss_pred             CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence            489999999  99999999999876  77876

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=86.88  E-value=0.79  Score=44.13  Aligned_cols=30  Identities=27%  Similarity=0.346  Sum_probs=27.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+
T Consensus         5 ~k~~lVtGas~--~iG~~ia~~l~~~G~~v~~   34 (235)
T PRK06550          5 TKTVLITGAAS--GIGLAQARAFLAQGAQVYG   34 (235)
T ss_pred             CCEEEEcCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            46799999998  9999999999999999988

>PRK12367 short chain dehydrogenase; Provisional

Probab=86.88  E-value=0.86  Score=45.46  Aligned_cols=33  Identities=18%  Similarity=0.244  Sum_probs=29.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  387 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~  387 (529)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++
T Consensus        14 ~k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r~~   48 (245)
T PRK12367         14 GKRIGITGASG--ALGKALTKAFRAKGAKVIGLTHSK   48 (245)
T ss_pred             CCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence            46899999998  9999999999999999987  554

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=86.74  E-value=1.1  Score=46.52  Aligned_cols=64  Identities=20%  Similarity=0.306  Sum_probs=44.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc---ccc-eeeeccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHN-LVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~---~~~-l~~~~~~~~-~~~~vwiv  421 (529)
                      +|.++|+ |  .+|+++|..|+++|.  ++.+  +++++.+.+..++....   ..+ .+...++++ ++++++|+
T Consensus         2 kI~IIGa-G--~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi   74 (306)
T cd05291           2 KVVIIGA-G--HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI   74 (306)
T ss_pred             EEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence            6899997 6  899999999999885  5666  77888777766653321   111 123335555 78888664

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=86.69  E-value=1.1  Score=43.48  Aligned_cols=45  Identities=22%  Similarity=0.343  Sum_probs=34.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~--~~~l~~~~~  398 (529)
                      ..+.|+++|+++  -||+++|+.|+++|.++++  ++.++  .+.+++...
T Consensus         4 ~~~~ilITGas~--GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~   52 (251)
T COG1028           4 SGKVALVTGASS--GIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK   52 (251)
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH
Confidence            457899999997  8999999999999999776  44443  455555433

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=86.67  E-value=0.86  Score=44.29  Aligned_cols=31  Identities=26%  Similarity=0.357  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+
T Consensus         7 ~~k~vlItGas~--~iG~~la~~l~~~G~~v~~   37 (252)
T PRK08220          7 SGKTVWVTGAAQ--GIGYAVALAFVEAGAKVIG   37 (252)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            346899999998  9999999999999999998

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=86.63  E-value=1.7  Score=43.22  Aligned_cols=36  Identities=22%  Similarity=0.342  Sum_probs=32.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~  392 (529)
                      .++.++|+.   .+|+.+|+-|.++|..|++  +++++.++
T Consensus         1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id~d~~~~~~   38 (225)
T COG0569           1 MKIIIIGAG---RVGRSVARELSEEGHNVVLIDRDEERVEE   38 (225)
T ss_pred             CEEEEECCc---HHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence            368899988   9999999999999999999  88888876

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=86.60  E-value=1.1  Score=45.81  Aligned_cols=39  Identities=10%  Similarity=0.175  Sum_probs=33.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ++|.++|+.   .+|+++|..|++.|.+|++  ++++++++.++
T Consensus         4 ~~I~ViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (291)
T PRK06035          4 KVIGVVGSG---VMGQGIAQVFARTGYDVTIVDVSEEILKNAME   44 (291)
T ss_pred             cEEEEECcc---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            579999996   9999999999999999999  78888776544

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=86.58  E-value=2.4  Score=42.76  Aligned_cols=55  Identities=25%  Similarity=0.225  Sum_probs=41.5

Q ss_pred             hhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          339 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       339 sltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      -+||+-.+...  .+....|++.|++|  .+|.++++.+...|.+|..  +++++.+.+++
T Consensus       128 ~~ta~~al~~~~~~~~g~~vlI~ga~g--~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~  186 (329)
T cd08294         128 GLTAYFGLLEICKPKAGETVVVNGAAG--AVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE  186 (329)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            35555444322  23457899999998  9999999988899999876  78888888876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=86.44  E-value=0.55  Score=46.49  Aligned_cols=33  Identities=18%  Similarity=0.230  Sum_probs=28.7

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      |+|+|+||  -||+++++.|.++|.+|..  |+.+..
T Consensus         1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~   35 (292)
T TIGR01777         1 ILITGGTG--FIGRALTQRLTKDGHEVTILTRSPPAG   35 (292)
T ss_pred             CEEEcccc--hhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence            68999999  9999999999999999987  655543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=86.38  E-value=2  Score=44.32  Aligned_cols=102  Identities=16%  Similarity=0.102  Sum_probs=66.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Cc---ceEEE--EcCc-
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWL--VGDD-  424 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~---~~vwi--vg~~-  424 (529)
                      +|-++|. |  .+|+++|+.|.+.|.+|++  |++++.+.+++. +...      ..+.++  +.   ++++|  +-+. 
T Consensus         2 ~Ig~IGl-G--~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~------~~s~~~~~~~~~~advVi~~vp~~~   71 (299)
T PRK12490          2 KLGLIGL-G--KMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GITA------RHSLEELVSKLEAPRTIWVMVPAGE   71 (299)
T ss_pred             EEEEEcc-c--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCee------cCCHHHHHHhCCCCCEEEEEecCch
Confidence            4788884 4  9999999999999999988  888888888653 2111      113332  22   44544  2221 


Q ss_pred             -CCh--hhh-hcCCCCceeecccccCcc-------CC-CCCceeecCCccccCC
Q 009674          425 -LTG--KEQ-ARAPKGTIFIPYTQIPPR-------KL-RKDCFYHSTPAMIIPP  466 (529)
Q Consensus       425 -~~~--~~q-~~a~~G~~f~~~~~~~~~-------~~-R~dc~y~~~~a~~~P~  466 (529)
                       +..  ++. ..+++|.++++.|.++|.       ++ ++.+.|.+-|.+--|.
T Consensus        72 ~~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~  125 (299)
T PRK12490         72 VTESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVW  125 (299)
T ss_pred             HHHHHHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHH
Confidence             111  122 235789999999988886       11 2578899988886554

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=86.28  E-value=1.1  Score=42.67  Aligned_cols=27  Identities=22%  Similarity=0.397  Sum_probs=25.2

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      |+++||||  =||+++++.|.++|.+|+.
T Consensus         1 IlI~GatG--~iG~~l~~~l~~~g~~v~~   27 (236)
T PF01370_consen    1 ILITGATG--FIGSALVRQLLKKGHEVIV   27 (236)
T ss_dssp             EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred             EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence            78999999  9999999999999999665

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=86.24  E-value=2.1  Score=43.02  Aligned_cols=86  Identities=16%  Similarity=0.195  Sum_probs=58.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c----cc---c-CcceEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW  419 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw  419 (529)
                      ....|++.|++|  .||.++++.+...|.++..  ++.++.+.+++. +.+   .++...  +    ++   . +..+++
T Consensus       139 ~g~~vlI~g~~g--~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~-g~~---~~~~~~~~~~~~~i~~~~~~~~~d~v  212 (324)
T cd08292         139 PGQWLIQNAAGG--AVGKLVAMLAAARGINVINLVRRDAGVAELRAL-GIG---PVVSTEQPGWQDKVREAAGGAPISVA  212 (324)
T ss_pred             CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhc-CCC---EEEcCCCchHHHHHHHHhCCCCCcEE
Confidence            356899999998  9999999988899999877  677777877653 321   112111  1    11   1 345666


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 009674          420 L--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       420 i--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                      +  +|.....+-.+.++++-.|+.+.
T Consensus       213 ~d~~g~~~~~~~~~~l~~~g~~v~~g  238 (324)
T cd08292         213 LDSVGGKLAGELLSLLGEGGTLVSFG  238 (324)
T ss_pred             EECCCChhHHHHHHhhcCCcEEEEEe
Confidence            6  55545555566777888888886

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=85.94  E-value=1.4  Score=43.31  Aligned_cols=42  Identities=19%  Similarity=0.269  Sum_probs=35.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ....|++.|++|  .+|.++++.+...|.++.+  +++++.+.+++
T Consensus       139 ~~~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~  182 (323)
T cd05276         139 AGETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEACRA  182 (323)
T ss_pred             CCCEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence            356899999997  9999999999999999887  77778877743

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=85.82  E-value=1.3  Score=45.59  Aligned_cols=40  Identities=13%  Similarity=0.287  Sum_probs=35.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ++|.++|+.   .+|+++|..|.+.|.+|++  +++++.++++++
T Consensus         5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~   46 (311)
T PRK06130          5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARGV   46 (311)
T ss_pred             cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            579999995   9999999999999999999  788888888764

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=85.82  E-value=2.5  Score=48.38  Aligned_cols=35  Identities=23%  Similarity=0.255  Sum_probs=29.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKD  388 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~  388 (529)
                      ..++|+|+|+||  =||+.+++.|.++ |.+|..  |+.+
T Consensus       314 ~~~~VLVTGatG--FIGs~Lv~~Ll~~~g~~V~~l~r~~~  351 (660)
T PRK08125        314 RRTRVLILGVNG--FIGNHLTERLLRDDNYEVYGLDIGSD  351 (660)
T ss_pred             cCCEEEEECCCc--hHHHHHHHHHHhCCCcEEEEEeCCch
Confidence            366899999999  9999999999975 789987  4443

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=85.71  E-value=2.6  Score=43.21  Aligned_cols=84  Identities=7%  Similarity=0.147  Sum_probs=53.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE-----
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL-----  420 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~----~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi-----  420 (529)
                      .+|.++|. |  .+|.++++.|.+.|.    ++..  |+++++++++++.+.+.      .++.++  ++++++|     
T Consensus         3 ~~IgfIG~-G--~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~------~~~~~e~~~~aDiIiLavkP   73 (272)
T PRK12491          3 KQIGFIGC-G--NMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITI------TTNNNEVANSADILILSIKP   73 (272)
T ss_pred             CeEEEECc-c--HHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEE------eCCcHHHHhhCCEEEEEeCh
Confidence            46899994 4  999999999998774    5666  77888888876543211      224433  5666655     


Q ss_pred             --EcCcCChhhhh-cCCCCceeecccc-cCcc
Q 009674          421 --VGDDLTGKEQA-RAPKGTIFIPYTQ-IPPR  448 (529)
Q Consensus       421 --vg~~~~~~~q~-~a~~G~~f~~~~~-~~~~  448 (529)
                        +.+.+  ++.. ..++|++++++.- ++-+
T Consensus        74 ~~~~~vl--~~l~~~~~~~~lvISi~AGi~i~  103 (272)
T PRK12491         74 DLYSSVI--NQIKDQIKNDVIVVTIAAGKSIK  103 (272)
T ss_pred             HHHHHHH--HHHHHhhcCCcEEEEeCCCCcHH
Confidence              22222  1221 1457788888875 5444

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=85.69  E-value=2.3  Score=44.88  Aligned_cols=83  Identities=14%  Similarity=0.183  Sum_probs=56.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCc---
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD---  424 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~---  424 (529)
                      ..++|.++|.-   .||+++|+.|...|.+|..  ++.+.....   +  +      ...++++  ++++++++--.   
T Consensus       145 ~g~~VgIIG~G---~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~---~--~------~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        145 KNMTVAIIGTG---RIGAATAKIYAGFGATITAYDAYPNKDLDF---L--T------YKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeCChhHhhhh---h--h------ccCCHHHHHhcCCEEEEeCCCcH
Confidence            34579999975   9999999999999999998  433321100   0  0      1225554  56766553333   


Q ss_pred             -----CChhhhhcCCCCceeecccc---cCcc
Q 009674          425 -----LTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       425 -----~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                           +..+...++++|++++.++|   ++..
T Consensus       211 ~t~~li~~~~l~~mk~gavlIN~aRG~~vd~~  242 (330)
T PRK12480        211 ESYHLFDKAMFDHVKKGAILVNAARGAVINTP  242 (330)
T ss_pred             HHHHHHhHHHHhcCCCCcEEEEcCCccccCHH
Confidence                 34467778999999999999   5544

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=85.69  E-value=0.69  Score=48.68  Aligned_cols=25  Identities=8%  Similarity=0.199  Sum_probs=22.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI  380 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~  380 (529)
                      .+|.++||+|  .||+.+|..|+.+|+
T Consensus         3 ~KV~IiGa~G--~VG~~~a~~l~~~~~   27 (322)
T cd01338           3 VRVAVTGAAG--QIGYSLLFRIASGEM   27 (322)
T ss_pred             eEEEEECCCc--HHHHHHHHHHHhccc
Confidence            4799999998  999999999997777

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=85.66  E-value=1.3  Score=51.54  Aligned_cols=42  Identities=12%  Similarity=0.124  Sum_probs=35.4

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      |+.-++|.|+||-   -+|+.||..+++.|++|.+  ++.+.+++-+
T Consensus       310 ~~~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~  353 (714)
T TIGR02437       310 AKDVKQAAVLGAG---IMGGGIAYQSASKGTPIVMKDINQHSLDLGL  353 (714)
T ss_pred             ccccceEEEECCc---hHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            4567789999998   8999999999999999999  7777766543

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=85.65  E-value=1.7  Score=48.69  Aligned_cols=100  Identities=20%  Similarity=0.224  Sum_probs=65.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------  421 (529)
                      ..++|.++|--   .||+++|+.|...|.+|...++..-.+-..+.+..      .+.++++  ++++++++        
T Consensus       137 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~------~~~~l~ell~~aDvV~l~lPlt~~T  207 (525)
T TIGR01327       137 YGKTLGVIGLG---RIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVE------LVDDLDELLARADFITVHTPLTPET  207 (525)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCE------EcCCHHHHHhhCCEEEEccCCChhh
Confidence            45789999975   99999999999999999883221001111111111      1235654  56776552        


Q ss_pred             cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecCC
Q 009674          422 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP  460 (529)
Q Consensus       422 g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~  460 (529)
                      -..++.+...+|++|++++.++|   ++.+         +++   -|++..+-+
T Consensus       208 ~~li~~~~l~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gAaLDVf~~EP~  261 (525)
T TIGR01327       208 RGLIGAEELAKMKKGVIIVNCARGGIIDEAALYEALEEGHVRAAALDVFEKEPP  261 (525)
T ss_pred             ccCcCHHHHhcCCCCeEEEEcCCCceeCHHHHHHHHHcCCeeEEEEecCCCCCC
Confidence            23466788999999999999999   4443         444   677766643

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>cd00704 MDH Malate dehydrogenase

Probab=85.64  E-value=0.91  Score=47.81  Aligned_cols=24  Identities=17%  Similarity=0.325  Sum_probs=21.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI  380 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~  380 (529)
                      +|.++||+|  .||+.+|..|+.+++
T Consensus         2 KV~IiGAaG--~VG~~~a~~L~~~~~   25 (323)
T cd00704           2 HVLITGAAG--QIGYNLLFLIASGEL   25 (323)
T ss_pred             EEEEECCCc--HHHHHHHHHHHhCCc
Confidence            689999999  999999999997664

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=85.63  E-value=1.7  Score=45.66  Aligned_cols=139  Identities=20%  Similarity=0.258  Sum_probs=77.3

Q ss_pred             HcCCcEEEeccc-ccc---cccccCCceeeecCCCCcceeeecCChh-----HHHHHHhc---CcCCCcEEEEecccCch
Q 009674          298 AKGVKVISLGLL-NQG---EELNRNGEIYLERQPNKLKIKVVDGSSL-----AAAVVVNS---LPKTTAHVLLRGTVTAN  365 (529)
Q Consensus       298 k~G~kv~~LG~l-n~~---e~ln~~g~~~~~k~p~~L~irvv~Gnsl-----taavv~~~---i~~~~~~V~~~Gatg~~  365 (529)
                      +-|=+|+.+|.. ..+   |-.+-..+..+ +.|++|.  ....-++     ||+..+.+   ++. ..+|++.||+|  
T Consensus        80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~-~~P~~ls--~~eAAal~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaG--  153 (326)
T COG0604          80 KVGDRVAALGGVGRDGGYAEYVVVPADWLV-PLPDGLS--FEEAAALPLAGLTAWLALFDRAGLKP-GETVLVHGAAG--  153 (326)
T ss_pred             CCCCEEEEccCCCCCCcceeEEEecHHHce-eCCCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEecCCc--
Confidence            578888888511 111   33333332322 3365222  2233333     77777887   222 67899999998  


Q ss_pred             hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccc-----ee-eeccccc-CcceEEE--EcCcCChhhhhcCC
Q 009674          366 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN-----LV-LSTSYAA-HKTKIWL--VGDDLTGKEQARAP  434 (529)
Q Consensus       366 kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~-----l~-~~~~~~~-~~~~vwi--vg~~~~~~~q~~a~  434 (529)
                      -||++..+.+...|..+..  .+.++.+ +.++++...-.+     ++ ++.++.. +..++++  +|...-.+-...+.
T Consensus       154 gVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~  232 (326)
T COG0604         154 GVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA  232 (326)
T ss_pred             hHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence            9999999999999854333  6667777 445555543222     12 1222222 3456666  55444444444445


Q ss_pred             CCceeeccc
Q 009674          435 KGTIFIPYT  443 (529)
Q Consensus       435 ~G~~f~~~~  443 (529)
                      +|-.++.+-
T Consensus       233 ~~G~lv~ig  241 (326)
T COG0604         233 PGGRLVSIG  241 (326)
T ss_pred             cCCEEEEEe
Confidence            555555544

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=85.62  E-value=5.9  Score=40.95  Aligned_cols=28  Identities=14%  Similarity=0.164  Sum_probs=25.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+|.++|+-   .+|+++|+.|++.|.+|.+
T Consensus         5 m~I~iiG~G---~~G~~lA~~l~~~G~~V~~   32 (308)
T PRK14619          5 KTIAILGAG---AWGSTLAGLASANGHRVRV   32 (308)
T ss_pred             CEEEEECcc---HHHHHHHHHHHHCCCEEEE
Confidence            468999886   9999999999999999999

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=85.57  E-value=0.97  Score=47.66  Aligned_cols=25  Identities=8%  Similarity=0.203  Sum_probs=22.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI  380 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~  380 (529)
                      -+|.++||+|  .||+++|..|+.+++
T Consensus         4 ~KV~IIGa~G--~VG~~~a~~l~~~~~   28 (323)
T TIGR01759         4 VRVAVTGAAG--QIGYSLLFRIASGEL   28 (323)
T ss_pred             eEEEEECCCc--HHHHHHHHHHHhCCc
Confidence            3799999999  999999999997776

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK05442 malate dehydrogenase; Provisional

Probab=85.47  E-value=0.73  Score=48.61  Aligned_cols=25  Identities=8%  Similarity=0.211  Sum_probs=22.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI  380 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~  380 (529)
                      .+|.++||+|  .||+.+|..|+.+++
T Consensus         5 ~KV~IiGaaG--~VG~~~a~~l~~~~~   29 (326)
T PRK05442          5 VRVAVTGAAG--QIGYSLLFRIASGDM   29 (326)
T ss_pred             cEEEEECCCc--HHHHHHHHHHHhhhh
Confidence            4899999998  999999999997666

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=85.41  E-value=1  Score=48.16  Aligned_cols=38  Identities=18%  Similarity=0.217  Sum_probs=32.1

Q ss_pred             hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecc
Q 009674          347 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC  386 (529)
Q Consensus       347 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~  386 (529)
                      +.+++...+|.++|.+|  .+|..+|+.|.+.|..|.+.+
T Consensus        92 ~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d  129 (374)
T PRK11199         92 KTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILE  129 (374)
T ss_pred             cccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeC
Confidence            34444667899999999  999999999999999999943

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=85.32  E-value=3  Score=43.00  Aligned_cols=86  Identities=13%  Similarity=0.217  Sum_probs=53.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCCh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLTG  427 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~~  427 (529)
                      .+|.++| +|  .+|+++|+.|.+.|.  +|..  |++++.+.+++. +...  .  ...+.++  ++++++|+--....
T Consensus         7 ~~I~IIG-~G--~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~-g~~~--~--~~~~~~~~~~~aDvViiavp~~~   78 (307)
T PRK07502          7 DRVALIG-IG--LIGSSLARAIRRLGLAGEIVGADRSAETRARAREL-GLGD--R--VTTSAAEAVKGADLVILCVPVGA   78 (307)
T ss_pred             cEEEEEe-eC--HHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC-CCCc--e--ecCCHHHHhcCCCEEEECCCHHH
Confidence            4799999 56  999999999998885  6776  777777776543 1100  0  1124443  67777664222111


Q ss_pred             -----hhh-hcCCCCceeecccccCc
Q 009674          428 -----KEQ-ARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       428 -----~~q-~~a~~G~~f~~~~~~~~  447 (529)
                           ++. ..+++|+++++++-+..
T Consensus        79 ~~~v~~~l~~~l~~~~iv~dvgs~k~  104 (307)
T PRK07502         79 SGAVAAEIAPHLKPGAIVTDVGSVKA  104 (307)
T ss_pred             HHHHHHHHHhhCCCCCEEEeCccchH
Confidence                 112 23578888888876543

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=85.08  E-value=2.1  Score=43.24  Aligned_cols=101  Identities=18%  Similarity=0.123  Sum_probs=61.7

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee--ecc
Q 009674          340 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL--STS  410 (529)
Q Consensus       340 ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~--~~~  410 (529)
                      +||+..++.+.     ++..+|++.|++|  .+|.++++.+.+.|.+|..  +++++.+.+++ ++.+.-.+.-.  ...
T Consensus       129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~  205 (326)
T cd08289         129 FTAALSIHRLEENGLTPEQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEVIPREELQEES  205 (326)
T ss_pred             HHHHHHHHHHHhcCCCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEEEcchhHHHHH
Confidence            35555555432     2356899999998  9999999999999999887  78888888854 44321111000  001


Q ss_pred             ccc---CcceEEE--EcCcCChhhhhcCCCCceeeccc
Q 009674          411 YAA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       411 ~~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                      +++   ..+++++  +|.....+-...++++-+++.+.
T Consensus       206 ~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g  243 (326)
T cd08289         206 IKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSG  243 (326)
T ss_pred             HHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEe
Confidence            111   2356665  33333334455667777788876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PLN02858 fructose-bisphosphate aldolase

Probab=85.07  E-value=1.3  Score=55.00  Aligned_cols=182  Identities=12%  Similarity=0.090  Sum_probs=104.3

Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccc-cc-cc-cCCceee---ecC-CCCcceeeecCChhHHH---H
Q 009674          275 QYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQG-EE-LN-RNGEIYL---ERQ-PNKLKIKVVDGSSLAAA---V  344 (529)
Q Consensus       275 ~y~~~~~~~~in~~I~~Ai~~A~k~G~kv~~LG~ln~~-e~-ln-~~g~~~~---~k~-p~~L~irvv~Gnsltaa---v  344 (529)
                      +|.-.|..+-+.|-+.-|...|++.|+..-...+..+. ++ .+ |.|+.-.   .|. .+.-.+++.+-|+=--+   -
T Consensus       233 d~~~~F~l~l~~KDl~la~~~A~~~g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~~~~~~~~~~~~~~~~  312 (1378)
T PLN02858        233 DYIEGRFLNVLVQNLGIVLDMAKSLPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGVNILEAANRELYKPED  312 (1378)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCCCccccccccccChHH
Confidence            34444556777788889999999999987654444443 11 11 1111100   000 00000122222221100   0


Q ss_pred             HHhcC---cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Ccce
Q 009674          345 VVNSL---PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTK  417 (529)
Q Consensus       345 v~~~i---~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~  417 (529)
                      --+++   +|..++|-++|--   .+|+++|+.|.+.|.+|..  |+.++.+.++++-.       ....+.++  ++++
T Consensus       313 ~~~~~~~~~~~~~~IGfIGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga-------~~~~s~~e~~~~aD  382 (1378)
T PLN02858        313 LAKQITMQAKPVKRIGFIGLG---AMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGG-------LAGNSPAEVAKDVD  382 (1378)
T ss_pred             HHHHhhccccCCCeEEEECch---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-------eecCCHHHHHhcCC
Confidence            00110   3445789999855   9999999999999999988  88888888876511       01223332  4565


Q ss_pred             EEE--Ec------CcCC-hh-hhhcCCCCceeecccccCccCC----------CCCceeecCCccccCC
Q 009674          418 IWL--VG------DDLT-GK-EQARAPKGTIFIPYTQIPPRKL----------RKDCFYHSTPAMIIPP  466 (529)
Q Consensus       418 vwi--vg------~~~~-~~-~q~~a~~G~~f~~~~~~~~~~~----------R~dc~y~~~~a~~~P~  466 (529)
                      +++  |.      +.+. +. -...+++|.++++.|-++|...          +++..|.+.|.+--|.
T Consensus       383 vVi~~V~~~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~  451 (1378)
T PLN02858        383 VLVIMVANEVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVK  451 (1378)
T ss_pred             EEEEecCChHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChh
Confidence            544  32      1121 11 1234589999999999888722          1588899988876555

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=85.04  E-value=2  Score=48.20  Aligned_cols=41  Identities=24%  Similarity=0.395  Sum_probs=36.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +.+|.+||..   ++|+.+|+.|.++|.++++  .|+|+.++++++
T Consensus       417 ~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~  459 (558)
T PRK10669        417 CNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELRER  459 (558)
T ss_pred             CCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
Confidence            6899999998   9999999999999999988  888888888754

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=85.00  E-value=2.9  Score=46.85  Aligned_cols=91  Identities=15%  Similarity=0.184  Sum_probs=63.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-ccc-----------eeeec-cc-----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-QHN-----------LVLST-SY-----  411 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~-~~~-----------l~~~~-~~-----  411 (529)
                      ..++|+|.|+-   -||...+..+...|-+|..  ++.+|++..++ ++.+. ..+           ....+ ++     
T Consensus       164 pg~kVlViGaG---~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        164 PPAKVLVIGAG---VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            37799999998   8999999999999998877  78888886655 44331 011           00111 21     


Q ss_pred             ---cc--CcceEEEEcCc---------CChhhhhcCCCCceeecccccCc
Q 009674          412 ---AA--HKTKIWLVGDD---------LTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       412 ---~~--~~~~vwivg~~---------~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                         .+  +.+|++|-...         ++++..+.+++|.++++++ +++
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg-~~~  288 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLA-AEN  288 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEc-cCC
Confidence               11  34788883333         3788999999999999999 653

>PLN02996 fatty acyl-CoA reductase

Probab=84.97  E-value=1.1  Score=49.75  Aligned_cols=25  Identities=12%  Similarity=0.272  Sum_probs=22.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQM  378 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~  378 (529)
                      +.+.|+|+|+||  -||+++++.|.+.
T Consensus        10 ~~k~VlvTGaTG--FlG~~ll~~LL~~   34 (491)
T PLN02996         10 ENKTILVTGATG--FLAKIFVEKILRV   34 (491)
T ss_pred             CCCeEEEeCCCc--HHHHHHHHHHHhh
Confidence            456899999999  9999999998864

>KOG3011 consensus Ubiquitin-conjugating enzyme [Posttranslational modification, protein turnover, chaperones]

Probab=84.96  E-value=0.84  Score=46.44  Aligned_cols=134  Identities=16%  Similarity=0.316  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhch-----hhh----hhhhcccCCCCCCCCcccccccCcHHHHHHHHH----HHHHHH
Q 009674           18 VILTILVHMGPVEFLYYWFHRALHH-----HYL----YSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL----FAIPLV   84 (529)
Q Consensus        18 ~i~~lll~llv~Df~~Yw~HRllH~-----~~L----y~r~H~~HHss~~p~p~ta~~~hplE~ll~~~l----~~iPll   84 (529)
                      .+++.+...+..||.-=.+|++--.     .++    +-+ =+-||..    |++-.++.++|.+.....    ...|+-
T Consensus       109 ~~La~~aG~i~AD~~SGl~HWaaD~~Gsv~tP~vG~~f~r-freHH~d----P~tITr~~f~~~~~ll~~a~~f~v~~~d  183 (293)
T KOG3011|consen  109 PALAAYAGYITADLGSGVYHWAADNYGSVSTPWVGRQFER-FQEHHKD----PWTITRRQFANNLHLLARAYTFIVLPLD  183 (293)
T ss_pred             HHHHHHHHHHHHhhhcceeEeeccccCccccchhHHHHHH-HHhccCC----cceeeHHHHhhhhHHHHHhheeEecCHH
Confidence            5667777788899999899987543     111    234 4568865    677777777776533211    112222


Q ss_pred             HHH--HhhhhhHHHHHHHHHHHHHHHHhcccceeeccccc--ccccCcchhcccChhhhhhhhcC-CCCCccCCcchhhh
Q 009674           85 TTM--VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWL--FTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDY  159 (529)
Q Consensus        85 ~~~--~lg~~si~~v~~y~i~~~~~~~l~Hsn~e~~P~~~--f~~lp~L~yli~tP~~H~lHH~~-~~~NYG~~~~lWDr  159 (529)
                      .+.  ....+-+.++.+++++......+.|.-..+ |.+.  .+.++    ++..-++|..||.. .++|||....+|.+
T Consensus       184 ~~~q~~~~h~fV~~~~i~v~~tnQiHkWsHTy~gL-P~wVv~LQd~h----lilpRkhH~iHH~aPh~~yyCI~tGw~N~  258 (293)
T KOG3011|consen  184 LAFQDPVFHGFVFLFAICVLFTNQIHKWSHTYSGL-PPWVVLLQDMH----LILPRKHHRIHHVAPHNTYYCIVSGWWNW  258 (293)
T ss_pred             HHhhcccHHHHHHHHHHHHHHHHHHHHHHhhhccC-chHHHHHhhcc----eecccccccccccCccccceEEeechhhc
Confidence            111  001112233344555666667788965544 5542  12222    45578899999987 89999999999987


Q ss_pred             hc
Q 009674          160 IY  161 (529)
Q Consensus       160 LF  161 (529)
                      ..
T Consensus       259 ~L  260 (293)
T KOG3011|consen  259 VL  260 (293)
T ss_pred             hH
Confidence            63

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=84.94  E-value=0.85  Score=47.76  Aligned_cols=95  Identities=15%  Similarity=0.211  Sum_probs=62.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------  422 (529)
                      .++|.++|--   +||+++|+.|..-|.+|..  +++++..        +.... ....++++  ++++++++-      
T Consensus       136 g~tvgIvG~G---~IG~~vA~~l~afG~~V~~~~~~~~~~~--------~~~~~-~~~~~l~e~l~~aDvvv~~lPlt~~  203 (312)
T PRK15469        136 DFTIGILGAG---VLGSKVAQSLQTWGFPLRCWSRSRKSWP--------GVQSF-AGREELSAFLSQTRVLINLLPNTPE  203 (312)
T ss_pred             CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCCCCCC--------Cceee-cccccHHHHHhcCCEEEECCCCCHH
Confidence            4688899876   9999999999999999988  2222110        10000 11224554  677776632      


Q ss_pred             --CcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecC
Q 009674          423 --DDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  459 (529)
Q Consensus       423 --~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~  459 (529)
                        ..++.+...+|++|++++.++|   |+.+         .+|   -|++..+-
T Consensus       204 T~~li~~~~l~~mk~ga~lIN~aRG~vVde~aL~~aL~~g~i~gaalDVf~~EP  257 (312)
T PRK15469        204 TVGIINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFSREP  257 (312)
T ss_pred             HHHHhHHHHHhcCCCCcEEEECCCccccCHHHHHHHHhcCCeeeEEecCCCCCC
Confidence              2345567889999999999999   5544         334   47777664

>PLN02527 aspartate carbamoyltransferase

Probab=84.91  E-value=9.4  Score=40.03  Aligned_cols=159  Identities=15%  Similarity=0.225  Sum_probs=95.8

Q ss_pred             HHHcCCcEEEecc------ccccccc-------ccCCceeeecCCC---------CcceeeecCCh----------hHHH
Q 009674          296 ADAKGVKVISLGL------LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS----------LAAA  343 (529)
Q Consensus       296 A~k~G~kv~~LG~------ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns----------ltaa  343 (529)
                      +.++|.+++.|+.      +.++|.+       ++..-+.+.|+|+         ...++|+.+-+          .=+.
T Consensus        61 ~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ~LaDl~  140 (306)
T PLN02527         61 MKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAATAEIPVINAGDGPGQHPTQALLDVY  140 (306)
T ss_pred             HHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHhCcEEEEECCChhHHHHHHHhCCCCEEECCCCCCCChHHHHHHHH
Confidence            4589999999965      2345554       6677788889986         35688887622          1245


Q ss_pred             HHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeeec-cccc--Cc
Q 009674          344 VVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYAA--HK  415 (529)
Q Consensus       344 vv~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~~--~~  415 (529)
                      ++.+.... +..+|+++|..+-+.+.+..+..|++. |..+.+-..+.|+   .+.+++. +.+.+ +.++ +.++  ++
T Consensus       141 Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~~a~~~  218 (306)
T PLN02527        141 TIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKMKDDIKDYLT-SKGVE-WEESSDLMEVASK  218 (306)
T ss_pred             HHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCCCHHHHHHHH-HcCCE-EEEEcCHHHHhCC
Confidence            56555432 457999999863137889999998886 9999883333331   2222221 23333 3344 7764  89


Q ss_pred             ceEEEEcCcCChhhhhcCCCCcee----ecccccCcc---CCCCCce-eecCC
Q 009674          416 TKIWLVGDDLTGKEQARAPKGTIF----IPYTQIPPR---KLRKDCF-YHSTP  460 (529)
Q Consensus       416 ~~vwivg~~~~~~~q~~a~~G~~f----~~~~~~~~~---~~R~dc~-y~~~~  460 (529)
                      ++|+.. ++++.|+..  .+-..+    =+| |++.+   ..|+||. .|.+|
T Consensus       219 aDvvyt-~~~q~e~~~--~~~~~~~~~~~~y-~v~~~ll~~a~~~~ivmHclP  267 (306)
T PLN02527        219 CDVLYQ-TRIQRERFG--ERIDLYEAARGKY-IVDKKVMDVLPKHAVVMHPLP  267 (306)
T ss_pred             CCEEEE-CCcchhhhc--chHHHHHHhCCCc-eECHHHHhccCCCCEEECCCC
Confidence            998887 555533210  000111    123 37776   4567874 56666

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=84.78  E-value=3.4  Score=44.70  Aligned_cols=80  Identities=14%  Similarity=0.014  Sum_probs=55.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc-------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-------  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-------  422 (529)
                      ..++|-++|.-   .||+.+|+.|..-|.+|+..+..+-     .. .+.    ....++++  +.++++++-       
T Consensus       115 ~gktvGIIG~G---~IG~~va~~l~a~G~~V~~~Dp~~~-----~~-~~~----~~~~~l~ell~~aDiV~lh~Plt~~g  181 (381)
T PRK00257        115 AERTYGVVGAG---HVGGRLVRVLRGLGWKVLVCDPPRQ-----EA-EGD----GDFVSLERILEECDVISLHTPLTKEG  181 (381)
T ss_pred             CcCEEEEECCC---HHHHHHHHHHHHCCCEEEEECCccc-----cc-ccC----ccccCHHHHHhhCCEEEEeCcCCCCc
Confidence            46789999985   9999999999999999998332110     00 010    11234554  566665522       


Q ss_pred             -----CcCChhhhhcCCCCceeecccc
Q 009674          423 -----DDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       423 -----~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                           .-++.+.+.++++|+++|-.+|
T Consensus       182 ~~~T~~li~~~~l~~mk~gailIN~aR  208 (381)
T PRK00257        182 EHPTRHLLDEAFLASLRPGAWLINASR  208 (381)
T ss_pred             cccccccCCHHHHhcCCCCeEEEECCC
Confidence                 2356678999999999999999

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=84.78  E-value=1.9  Score=42.62  Aligned_cols=86  Identities=12%  Similarity=0.102  Sum_probs=53.0

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEec-chhhHHHHHhh-Cccccc--cceeeec-cccc--CcceEEEE-
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI-CKDDYEKLKLR-IPVEAQ--HNLVLST-SYAA--HKTKIWLV-  421 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~-~~~~~~~l~~~-~~~~~~--~~l~~~~-~~~~--~~~~vwiv-  421 (529)
                      +-.-++|+++|...  -||+-+|..|.++|-.|++- +..-+..-+.. +..+..  .+   .+ ++++  +.++|+|+ 
T Consensus        59 ~l~GK~vvVIGrS~--iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~---~~~~l~~~~~~ADIVIsA  133 (197)
T cd01079          59 RLYGKTITIINRSE--VVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTD---EEAMTLDCLSQSDVVITG  133 (197)
T ss_pred             CCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccc---hhhHHHHHhhhCCEEEEc
Confidence            45688999999997  99999999999999999982 11111100000 101110  01   01 1333  56777774 


Q ss_pred             -cC--c-CChhhhhcCCCCceeeccc
Q 009674          422 -GD--D-LTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       422 -g~--~-~~~~~q~~a~~G~~f~~~~  443 (529)
                       |+  . ++++..   ++|+++||+.
T Consensus       134 vG~~~~~i~~d~i---k~GavVIDVG  156 (197)
T cd01079         134 VPSPNYKVPTELL---KDGAICINFA  156 (197)
T ss_pred             cCCCCCccCHHHc---CCCcEEEEcC
Confidence             33  2 555555   9999999998

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=84.67  E-value=3  Score=41.52  Aligned_cols=100  Identities=15%  Similarity=0.073  Sum_probs=60.2

Q ss_pred             hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc----ccee-eecc
Q 009674          340 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ----HNLV-LSTS  410 (529)
Q Consensus       340 ltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~----~~l~-~~~~  410 (529)
                      +||+..++.+-  +....|++.|++|  .+|.++++.+..+|.+|..  +++++.+.++ +++...-    ..+. ++.+
T Consensus       128 ~ta~~~l~~~~~~~~g~~vlV~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~i~~  204 (320)
T cd08243         128 YTAWGSLFRSLGLQPGDTLLIRGGTS--SVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVIDDGAIAEQLRA  204 (320)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEecCccHHHHHHH
Confidence            45555555542  2357999999998  9999999999999999877  6777777774 3332110    0100 0111


Q ss_pred             cccCcceEEE--EcCcCChhhhhcCCCCceeeccc
Q 009674          411 YAAHKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       411 ~~~~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                      + .+..++++  +|.....+-.+.++++-+|+.+.
T Consensus       205 ~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g  238 (320)
T cd08243         205 A-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTG  238 (320)
T ss_pred             h-CCCceEEEECCChHHHHHHHHHhccCCEEEEEc
Confidence            1 12345555  33333344455667777777766

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=84.60  E-value=1.1  Score=47.14  Aligned_cols=64  Identities=22%  Similarity=0.278  Sum_probs=39.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcE-EEe---cchhhHHHHHhhCccccc---cceeeec-c--ccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT---ICKDDYEKLKLRIPVEAQ---HNLVLST-S--YAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l---~~~~~~~~l~~~~~~~~~---~~l~~~~-~--~~~-~~~~vwiv  421 (529)
                      .+|.|+|| |  .||+++|..|..++.. ++.   .+++..+-...++.....   .+ ++++ +  |++ ++++++|+
T Consensus         1 ~KVaviGa-G--~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~~~y~~~~~aDiVvi   75 (313)
T COG0039           1 MKVAVIGA-G--NVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGDGDYEDLKGADIVVI   75 (313)
T ss_pred             CeEEEECC-C--hHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCc-eEEecCCChhhhcCCCEEEE
Confidence            36999999 8  9999999999987776 333   554444433222222111   11 2344 2  666 77777664

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=84.27  E-value=1.8  Score=44.06  Aligned_cols=75  Identities=20%  Similarity=0.211  Sum_probs=47.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCcccccccee-eec---cccc---------C
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIPVEAQHNLV-LST---SYAA---------H  414 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~~~~~~~~l~-~~~---~~~~---------~  414 (529)
                      -+.|+++|+.|  -||++.+..|.++|++++.  .++|   ...+||+..|..+-...- .++   ++++         -
T Consensus         5 GKna~vtggag--GIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAG--GIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             CceEEEecCCc--hhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            36788999987  8999999999999999998  3344   444555544443311100 222   2221         3


Q ss_pred             cceEEEEcCcCChhh
Q 009674          415 KTKIWLVGDDLTGKE  429 (529)
Q Consensus       415 ~~~vwivg~~~~~~~  429 (529)
                      +.||.|-|++|..+.
T Consensus        83 ~iDIlINgAGi~~dk   97 (261)
T KOG4169|consen   83 TIDILINGAGILDDK   97 (261)
T ss_pred             ceEEEEcccccccch
Confidence            568888777766543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=84.11  E-value=0.99  Score=47.58  Aligned_cols=60  Identities=18%  Similarity=0.166  Sum_probs=49.2

Q ss_pred             HHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccc
Q 009674          342 AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH  403 (529)
Q Consensus       342 aavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~  403 (529)
                      .....-..|+-...|+++|...  -+|.++|.-+.++|-.|++  |++++++++++++.-.++.
T Consensus        22 ~~~~~~~~~k~~~hi~itggS~--glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~   83 (331)
T KOG1210|consen   22 DHRSFIVKPKPRRHILITGGSS--GLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV   83 (331)
T ss_pred             HHHhhhcccCccceEEEecCcc--hhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc
Confidence            3334444566678999999985  8999999999999999998  9999999999997776643

>PLN00016 RNA-binding protein; Provisional

Probab=83.92  E-value=1  Score=47.47  Aligned_cols=38  Identities=21%  Similarity=0.217  Sum_probs=32.4

Q ss_pred             cCCCcEEEEe----cccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          350 PKTTAHVLLR----GTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       350 ~~~~~~V~~~----Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      ....++|+|+    |+||  -||+.+++.|.++|.+|+.  |+++.
T Consensus        49 ~~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             ccccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            3456789999    9999  9999999999999999988  66543

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=83.91  E-value=2.3  Score=44.30  Aligned_cols=63  Identities=21%  Similarity=0.274  Sum_probs=42.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccccccceeeeccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~----l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      +|.++|+ |  .||.++|..|+++|+  ++.+  +++++.+.    +....+.... ..+..+++++ ++++++|+
T Consensus         2 kI~IIGa-G--~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~-~~i~~~d~~~l~~aDiVii   73 (308)
T cd05292           2 KVAIVGA-G--FVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKP-VRIYAGDYADCKGADVVVI   73 (308)
T ss_pred             EEEEECC-C--HHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCC-eEEeeCCHHHhCCCCEEEE
Confidence            5899999 6  999999999999994  6666  67766654    4433222211 2234347766 88888664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=83.68  E-value=1.1  Score=52.13  Aligned_cols=39  Identities=10%  Similarity=0.140  Sum_probs=33.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  393 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l  393 (529)
                      .-++|.|+||-   -+|+.||..+++.|++|++  ++++.+++.
T Consensus       334 ~i~~v~ViGaG---~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~  374 (737)
T TIGR02441       334 PVKTLAVLGAG---LMGAGIAQVSVDKGLKTVLKDATPAGLDRG  374 (737)
T ss_pred             cccEEEEECCC---HhHHHHHHHHHhCCCcEEEecCCHHHHHHH
Confidence            45689999994   9999999999999999999  677766653

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=83.67  E-value=2.1  Score=42.84  Aligned_cols=40  Identities=15%  Similarity=0.178  Sum_probs=33.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC---cEEEe--cchhhHHHHHhhC
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~l--~~~~~~~~l~~~~  397 (529)
                      +|.++|. |  .+|+++|+.|.+.|   .+|.+  |++++.+.++++.
T Consensus         4 ~I~iIG~-G--~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~   48 (267)
T PRK11880          4 KIGFIGG-G--NMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY   48 (267)
T ss_pred             EEEEEec-h--HHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc
Confidence            6899997 5  99999999999888   56666  8888888887753

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=83.63  E-value=3.6  Score=44.46  Aligned_cols=84  Identities=17%  Similarity=0.102  Sum_probs=59.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD------  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~------  423 (529)
                      ..++|-++|.-   .||+++|+.|..-|.+|+..+..+-+    +   +..   ....++++  +.++|+++--      
T Consensus       115 ~gktvGIIG~G---~IG~~vA~~l~a~G~~V~~~dp~~~~----~---~~~---~~~~~L~ell~~sDiI~lh~PLt~~g  181 (378)
T PRK15438        115 HDRTVGIVGVG---NVGRRLQARLEALGIKTLLCDPPRAD----R---GDE---GDFRSLDELVQEADILTFHTPLFKDG  181 (378)
T ss_pred             CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCcccc----c---ccc---cccCCHHHHHhhCCEEEEeCCCCCCc
Confidence            57899999985   99999999999999999993322111    0   110   11235554  5677755222      


Q ss_pred             ------cCChhhhhcCCCCceeecccc---cCcc
Q 009674          424 ------DLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       424 ------~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                            -++.++..+|++|+++|..+|   |+.+
T Consensus       182 ~~~T~~li~~~~l~~mk~gailIN~aRG~vVDe~  215 (378)
T PRK15438        182 PYKTLHLADEKLIRSLKPGAILINACRGAVVDNT  215 (378)
T ss_pred             ccccccccCHHHHhcCCCCcEEEECCCchhcCHH
Confidence                  366788899999999999999   5554

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=83.42  E-value=5.3  Score=43.40  Aligned_cols=90  Identities=14%  Similarity=0.093  Sum_probs=59.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-------------ccceeeecccccCcceE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-------------QHNLVLSTSYAAHKTKI  418 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~-------------~~~l~~~~~~~~~~~~v  418 (529)
                      .+|.++|..   -+|...|..|+++|.+|+.  +++++.+.+++......             ...+...+++  +++++
T Consensus         4 ~kI~VIGlG---~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~--~~aDv   78 (415)
T PRK11064          4 ETISVIGLG---YIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTP--EPADA   78 (415)
T ss_pred             cEEEEECcc---hhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeeccc--ccCCE
Confidence            579999985   9999999999999999998  88999998875522111             1111111222  24444


Q ss_pred             --EEEcCcCCh-------------hh-hhcCCCCceeecccccCcc
Q 009674          419 --WLVGDDLTG-------------KE-QARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       419 --wivg~~~~~-------------~~-q~~a~~G~~f~~~~~~~~~  448 (529)
                        ..|+...++             ++ ...+++|++++.-|-+||.
T Consensus        79 vii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pg  124 (415)
T PRK11064         79 FLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSPVG  124 (415)
T ss_pred             EEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence              346654211             11 2236899999999988886

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=83.29  E-value=1.3  Score=39.48  Aligned_cols=33  Identities=15%  Similarity=0.186  Sum_probs=26.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD  388 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~  388 (529)
                      +.++++|++|  -||+++++.|+++|. .|.+  |+++
T Consensus         1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~~r~~~   36 (180)
T smart00822        1 GTYLITGGLG--GLGLELARWLAERGARHLVLLSRSGP   36 (180)
T ss_pred             CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence            3689999998  999999999999886 4555  5444

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06223 malate dehydrogenase; Reviewed

Probab=83.29  E-value=2.5  Score=43.45  Aligned_cols=65  Identities=17%  Similarity=0.251  Sum_probs=41.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhh----Cccccccceeee-ccccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLR----IPVEAQHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~----~~~~~~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      .+|.++|+ |  .+|+++|..|++.|. .+.+  +++++.+....+    ........-+.. +++++ ++++++|+
T Consensus         3 ~KI~VIGa-G--~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii   76 (307)
T PRK06223          3 KKISIIGA-G--NVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVI   76 (307)
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEE
Confidence            47999999 7  999999999998875 7777  666655433222    111111111333 36766 88888663

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=83.15  E-value=3.1  Score=42.79  Aligned_cols=99  Identities=14%  Similarity=0.111  Sum_probs=62.1

Q ss_pred             hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec---cc-
Q 009674          340 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---SY-  411 (529)
Q Consensus       340 ltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~---~~-  411 (529)
                      +||+..+...  .+....|++.|++|  -||.++++.+..+|.+|..  ++.++.+.++++++.+.   .+..+   ++ 
T Consensus       137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G--~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~  211 (338)
T cd08295         137 LTAYAGFYEVCKPKKGETVFVSAASG--AVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD---AFNYKEEPDLD  211 (338)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce---eEEcCCcccHH
Confidence            5555555332  23457899999998  9999999988899999876  78889888887554322   11111   11 


Q ss_pred             ---cc---CcceEEE--EcCcCChhhhhcCCCCceeeccc
Q 009674          412 ---AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       412 ---~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                         ++   ...++++  +|....++-.....+|-.++.+.
T Consensus       212 ~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G  251 (338)
T cd08295         212 AALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACG  251 (338)
T ss_pred             HHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEec
Confidence               11   2345555  34333334445566777777766

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK04284 ornithine carbamoyltransferase; Provisional

Probab=83.07  E-value=14  Score=39.22  Aligned_cols=167  Identities=20%  Similarity=0.219  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------
Q 009674          289 IEEAILEADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------  339 (529)
Q Consensus       289 I~~Ai~~A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------  339 (529)
                      -|.|+   .++|.+++.|+.    +.++|.       |+...-+.+.|+|+         ..+++|+.|.+         
T Consensus        63 Fe~A~---~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iviR~~~~~~~~~~a~~s~vPVINa~~~~~HPtQaL  139 (332)
T PRK04284         63 FEVAA---YDQGAHVTYLGPTGSQMGKKESTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVL  139 (332)
T ss_pred             HHHHH---HHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEecCchHHHHHHHHhCCCCEEECCCCCCChHHHH
Confidence            45554   569999999865    334554       45566677888877         35688988754         


Q ss_pred             hHHHHHHhcC-c-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhh-------HHHHHhhCccccccceeeec-
Q 009674          340 LAAAVVVNSL-P-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD-------YEKLKLRIPVEAQHNLVLST-  409 (529)
Q Consensus       340 ltaavv~~~i-~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~-------~~~l~~~~~~~~~~~l~~~~-  409 (529)
                      +=..++.+.. . -+..+|+++|... +.+++..+..|++-|.++.+-..+.       .++.++ ...+.+.. +.++ 
T Consensus       140 ~Dl~Ti~e~~~g~l~g~kia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~-~~~~~g~~-~~~~~  216 (332)
T PRK04284        140 ADFLTAKEHLKKPYKDIKFTYVGDGR-NNVANALMQGAAIMGMDFHLVCPKELNPDDELLNKCKE-IAAETGGK-ITITD  216 (332)
T ss_pred             HHHHHHHHHhcCCcCCcEEEEecCCC-cchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHH-HHHHcCCe-EEEEc
Confidence            1246666663 2 2457999999862 3789999999999999999933332       222221 11223333 3344 


Q ss_pred             cccc--CcceEEEEcCcCChhhhhc--CCCCceeecccccCcc---CCC-CCce-eecCCcc
Q 009674          410 SYAA--HKTKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR---KLR-KDCF-YHSTPAM  462 (529)
Q Consensus       410 ~~~~--~~~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~---~~R-~dc~-y~~~~a~  462 (529)
                      ++++  ++++|+..+.|.+..+...  ...-..|-+| |++++   ..+ +|+. .|.+|+.
T Consensus       217 d~~ea~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~~y-~v~~e~l~~a~~~~~ivmHplP~~  277 (332)
T PRK04284        217 DIDEGVKGSDVIYTDVWVSMGEPDEVWEERIKLLKPY-QVNKEMMKKTGNPNAIFEHCLPSF  277 (332)
T ss_pred             CHHHHhCCCCEEEECCcccCccchhhHHHHHHhccCC-cCCHHHHhhcCCCCcEEECCCCCC
Confidence            7764  7888877765543221000  0000223344 38877   345 4776 5778864

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=82.90  E-value=1.8  Score=50.40  Aligned_cols=38  Identities=13%  Similarity=0.184  Sum_probs=32.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~  392 (529)
                      +-++|.|+||-   -+|+.||..+++.|.+|++  .+++.+++
T Consensus       312 ~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~  351 (715)
T PRK11730        312 PVKQAAVLGAG---IMGGGIAYQSASKGVPVIMKDINQKALDL  351 (715)
T ss_pred             ccceEEEECCc---hhHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence            45689999998   8999999999999999999  67666553

>PRK11891 aspartate carbamoyltransferase; Provisional

Probab=82.75  E-value=6  Score=43.53  Aligned_cols=166  Identities=17%  Similarity=0.246  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHcCCcEEEecc-----cccccc-------cccCCceeeecCCC---------CcceeeecCCh--------
Q 009674          289 IEEAILEADAKGVKVISLGL-----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS--------  339 (529)
Q Consensus       289 I~~Ai~~A~k~G~kv~~LG~-----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns--------  339 (529)
                      -|.|+   .++|..++.|+.     +.++|.       |+...-+.+.|+|.         ..+++|+.+-+        
T Consensus       144 FE~A~---~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y~D~IviR~~~~~~~~e~A~~s~vPVINAgdg~~~HPtQ  220 (429)
T PRK11891        144 FGAAF---CRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGYVDALVIRHPEQGSVAEFARATNLPVINGGDGPGEHPSQ  220 (429)
T ss_pred             HHHHH---HHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHhCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHH
Confidence            45554   489999999954     334454       45667788888876         45789998643        


Q ss_pred             --hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeee
Q 009674          340 --LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLS  408 (529)
Q Consensus       340 --ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l~~~~~~~---~l~~~~~~~~~~~l~~~  408 (529)
                        +=..++.+...     .+..+|+++|...-+.+++..+..|++. |.++.+-..+.|+   .+.+++. +.+.. +.+
T Consensus       221 aLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~~~~~~-~~G~~-v~~  298 (429)
T PRK11891        221 ALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVEQIS-RNGHV-IEQ  298 (429)
T ss_pred             HHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHH-hcCCe-EEE
Confidence              22556666542     2357999999972228899999999975 9999883333332   2222211 12333 434


Q ss_pred             c-cccc--CcceEEEEcCcCChhhhhcCCCCceeecccccCcc---C-CCCCce-eecCCc
Q 009674          409 T-SYAA--HKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---K-LRKDCF-YHSTPA  461 (529)
Q Consensus       409 ~-~~~~--~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~---~-~R~dc~-y~~~~a  461 (529)
                      + ++++  ++++|+...- +..|+......-..+-+| |++.+   . .++||. .|.+|+
T Consensus       299 ~~d~~eav~~ADVVYt~~-~q~er~~~~~~~~~~~~y-~vt~ell~~~ak~dai~MHcLPr  357 (429)
T PRK11891        299 TDDLAAGLRGADVVYATR-IQKERFADESFEGYTPDF-QINQALVDAVCKPDTLIMHPLPR  357 (429)
T ss_pred             EcCHHHHhCCCCEEEEcC-chhhcccCHHHHHhccCC-cCCHHHHhCccCCCcEEECCCCC
Confidence            4 7764  8888888744 332222100001123344 38887   3 467877 567774

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=82.60  E-value=4.3  Score=41.03  Aligned_cols=99  Identities=13%  Similarity=0.107  Sum_probs=59.0

Q ss_pred             hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--c---
Q 009674          340 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S---  410 (529)
Q Consensus       340 ltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~---  410 (529)
                      +||+..+..+-  +....|++.|++|  .+|.++++.+.+.|.+|..  +++++.+.+++ ++..   ..+...  +   
T Consensus       125 ~ta~~~l~~~~~~~~~~~vlI~ga~g--~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~---~v~~~~~~~~~~  198 (329)
T cd08250         125 LTASIALEEVGEMKSGETVLVTAAAG--GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCD---RPINYKTEDLGE  198 (329)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEeCcc--HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCc---eEEeCCCccHHH
Confidence            44444443331  2356899999998  9999999988899999877  77778777744 4321   111111  1   


Q ss_pred             -ccc---CcceEEE--EcCcCChhhhhcCCCCceeecccc
Q 009674          411 -YAA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       411 -~~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                       +..   +..++++  +|.....+-.+.++++-.|+.+..
T Consensus       199 ~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~  238 (329)
T cd08250         199 VLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGF  238 (329)
T ss_pred             HHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEec
Confidence             111   2345555  333333344556777778887763

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02342 ornithine carbamoyltransferase

Probab=82.55  E-value=19  Score=38.57  Aligned_cols=162  Identities=15%  Similarity=0.191  Sum_probs=95.9

Q ss_pred             HHHcCCcEEEecccc----ccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGLLN----QGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~ln----~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++.|+.=+    ++|.+       ....-+.+.|+|+         ...+.|+.+-+         +=..++.
T Consensus       107 ~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y~D~IviR~~~~~~~~~la~~~~vPVINA~~~~~HPtQaLaDl~Ti~  186 (348)
T PLN02342        107 FFLLGGHALYLGPDDIQLGKREETRDIARVLSRYNDIIMARVFAHQDVLDLAEYSSVPVINGLTDYNHPCQIMADALTII  186 (348)
T ss_pred             HHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEeCCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            578999999996433    44443       3445567778876         24577777643         1134555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccc-cceeeec-cccc--CcceE
Q 009674          347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQ-HNLVLST-SYAA--HKTKI  418 (529)
Q Consensus       347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~~~~~~~~-~~l~~~~-~~~~--~~~~v  418 (529)
                      +.... +..+|+++|...  .+.+..+..|.+-|.++.+-..+.|+   ++.+++. +.+ .. +.++ ++++  ++++|
T Consensus       187 e~~G~l~glkva~vGD~~--nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~-~~g~~~-~~~~~d~~eav~~aDV  262 (348)
T PLN02342        187 EHIGRLEGTKVVYVGDGN--NIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKAR-AAGISK-IEITNDPAEAVKGADV  262 (348)
T ss_pred             HHhCCcCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHH-HhCCCc-EEEEcCHHHHhCCCCE
Confidence            54432 457999999975  79999999999999999983333332   1111111 111 12 3344 7764  88899


Q ss_pred             EEEcCcCChhhhhc-CCCCceeecccccCcc---CCCCCce-eecCCcc
Q 009674          419 WLVGDDLTGKEQAR-APKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM  462 (529)
Q Consensus       419 wivg~~~~~~~q~~-a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~  462 (529)
                      +..+.|.+..+..+ ...-..|-+| |++.+   ..++||. -|.+|+.
T Consensus       263 vy~~~W~s~~~~e~~~~~~~~~~~y-~vt~ell~~ak~~aivMHpLP~~  310 (348)
T PLN02342        263 VYTDVWASMGQKEEAEKRKKAFQGF-QVNEALMKLAGPQAYFMHCLPAE  310 (348)
T ss_pred             EEECCccccccchhhHHHHHhccCC-ccCHHHHhccCCCcEEeCCCCcC
Confidence            88876554211100 0011123445 48887   5568886 4777764

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=82.36  E-value=1.5  Score=44.91  Aligned_cols=26  Identities=19%  Similarity=0.305  Sum_probs=23.0

Q ss_pred             EEecccCchhhHHHHHHHHhccC--cEEEe
Q 009674          357 LLRGTVTANKVANAVASSLCQMG--IKVAT  384 (529)
Q Consensus       357 ~~~Gatg~~kig~ava~~L~~~~--~~v~l  384 (529)
                      +|+|++|  =||+.+++.|.++|  .+|..
T Consensus         1 LVTGgsG--flG~~iv~~Ll~~g~~~~Vr~   28 (280)
T PF01073_consen    1 LVTGGSG--FLGSHIVRQLLERGYIYEVRV   28 (280)
T ss_pred             CEEcCCc--HHHHHHHHHHHHCCCceEEEE
Confidence            5899999  99999999999999  56655

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=82.28  E-value=1.6  Score=44.07  Aligned_cols=64  Identities=17%  Similarity=0.268  Sum_probs=42.5

Q ss_pred             EEEecccCchhhHHHHHHHHhccC----cEEEe--cchhhHHHHHhhCcccccc--c-eeeec-c-ccc-CcceEEEE
Q 009674          356 VLLRGTVTANKVANAVASSLCQMG----IKVAT--ICKDDYEKLKLRIPVEAQH--N-LVLST-S-YAA-HKTKIWLV  421 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~----~~v~l--~~~~~~~~l~~~~~~~~~~--~-l~~~~-~-~~~-~~~~vwiv  421 (529)
                      |.++||.|  .+|+.+|..|+..|    .++.|  +++++++....++..-...  + -+..+ + +++ ++++++|.
T Consensus         1 I~IIGagG--~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~   76 (263)
T cd00650           1 IAVIGAGG--NVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVII   76 (263)
T ss_pred             CEEECCCC--hHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEE
Confidence            57899987  89999999999888    67887  6666666555543221111  1 12344 5 445 88888774

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=82.22  E-value=2.8  Score=44.53  Aligned_cols=30  Identities=23%  Similarity=0.320  Sum_probs=28.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ...|+|+|+.|  =||+.++..|-++|..|+.
T Consensus         2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~   31 (343)
T KOG1371|consen    2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVI   31 (343)
T ss_pred             CcEEEEecCCc--ceehHHHHHHHhCCCcEEE
Confidence            36899999999  9999999999999999999

>PLN02306 hydroxypyruvate reductase

Probab=82.22  E-value=3  Score=45.11  Aligned_cols=94  Identities=11%  Similarity=0.111  Sum_probs=59.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe--cch-hhHHHHHhhCcc----ccc--cceeeeccccc--CcceEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICK-DDYEKLKLRIPV----EAQ--HNLVLSTSYAA--HKTKIW  419 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l--~~~-~~~~~l~~~~~~----~~~--~~l~~~~~~~~--~~~~vw  419 (529)
                      ..++|-++|.-   .||+++|+.|+ --|.+|+.  ++. ++.+......+.    ...  .......++++  +.+|++
T Consensus       164 ~gktvGIiG~G---~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV  240 (386)
T PLN02306        164 KGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVI  240 (386)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEE
Confidence            45788999976   99999999997 78999987  222 122211111110    000  00001236665  677776


Q ss_pred             EE--------cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674          420 LV--------GDDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       420 iv--------g~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                      ++        -..|+.++..+|++|+.||-++|   |+.+
T Consensus       241 ~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVDe~  280 (386)
T PLN02306        241 SLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVIDEV  280 (386)
T ss_pred             EEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccCHH
Confidence            63        23577888999999999999999   5554

>PLN02602 lactate dehydrogenase

Probab=82.07  E-value=1.3  Score=47.14  Aligned_cols=64  Identities=22%  Similarity=0.339  Sum_probs=41.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCcccc----ccceeee-ccccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA----QHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~--v~l--~~~~~~~~l~~~~~~~~----~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      .+|.++|+ |  .||+++|..|+.+++.  +.|  .++++.+-...++....    ... +.. ++|++ ++++|+|+
T Consensus        38 ~KI~IIGa-G--~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~~dy~~~~daDiVVi  111 (350)
T PLN02602         38 TKVSVVGV-G--NVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILASTDYAVTAGSDLCIV  111 (350)
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeCCCHHHhCCCCEEEE
Confidence            69999997 7  9999999999976763  444  56665554433322211    112 233 36776 88888775

>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]

Probab=82.02  E-value=1.1  Score=47.93  Aligned_cols=140  Identities=19%  Similarity=0.237  Sum_probs=88.8

Q ss_pred             eeeecCCCCcceeeecCChhHHHHHH-hcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhC
Q 009674          321 IYLERQPNKLKIKVVDGSSLAAAVVV-NSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRI  397 (529)
Q Consensus       321 ~~~~k~p~~L~irvv~Gnsltaavv~-~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~  397 (529)
                      -+..--|.-|++|-.|--+.+-+.+. +++.+  .+.+|.++|=.   +.|+-.|..|.+.|-.+..-++++|++++++.
T Consensus        17 t~~~~~p~~~~~~a~~~~~i~d~~~~~~s~~~~k~tl~IaIIGfG---nmGqflAetli~aGh~li~hsRsdyssaa~~y   93 (480)
T KOG2380|consen   17 TFLISPPRSLRIRAIDAAQIFDYMVSEDSIEQWKATLVIAIIGFG---NMGQFLAETLIDAGHGLICHSRSDYSSAAEKY   93 (480)
T ss_pred             ceeccCcHHHHHHhhhhhhhhhcccCcchhhhcccceEEEEEecC---cHHHHHHHHHHhcCceeEecCcchhHHHHHHh
Confidence            33344444355666664444444333 22332  46688888865   89999999999999999996666799999997


Q ss_pred             ccccccceeeecccccCcceEEEEcC-cCChhh------hhcCCCCceeecccc--cCcc-----CCCCCceeecCCccc
Q 009674          398 PVEAQHNLVLSTSYAAHKTKIWLVGD-DLTGKE------QARAPKGTIFIPYTQ--IPPR-----KLRKDCFYHSTPAMI  463 (529)
Q Consensus       398 ~~~~~~~l~~~~~~~~~~~~vwivg~-~~~~~~------q~~a~~G~~f~~~~~--~~~~-----~~R~dc~y~~~~a~~  463 (529)
                      +...=.+   ..|+-++..++++.-. .++-|.      -.+...||+|.++..  -|++     -+-+||-.+.+-.|-
T Consensus        94 g~~~ft~---lhdlcerhpDvvLlctsilsiekilatypfqrlrrgtlfvdvlSvKefek~lfekYLPkdfDIlctHpmf  170 (480)
T KOG2380|consen   94 GSAKFTL---LHDLCERHPDVVLLCTSILSIEKILATYPFQRLRRGTLFVDVLSVKEFEKELFEKYLPKDFDILCTHPMF  170 (480)
T ss_pred             ccccccc---HHHHHhcCCCEEEEEehhhhHHHHHHhcCchhhccceeEeeeeecchhHHHHHHHhCccccceEeecCCc
Confidence            7766222   2232236667766221 111111      113578999998765  2333     234999999999988


Q ss_pred             cCC
Q 009674          464 IPP  466 (529)
Q Consensus       464 ~P~  466 (529)
                      =|+
T Consensus       171 GPk  173 (480)
T KOG2380|consen  171 GPK  173 (480)
T ss_pred             CCC
Confidence            777

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=81.83  E-value=1.7  Score=45.28  Aligned_cols=28  Identities=21%  Similarity=0.270  Sum_probs=25.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcE--EEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIK--VAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~--v~l  384 (529)
                      +|.++||||  .+|+++|..|+..|..  |.+
T Consensus         2 kI~IiGatG--~vG~~~a~~l~~~g~~~~v~l   31 (309)
T cd05294           2 KVSIIGASG--RVGSATALLLAKEDVVKEINL   31 (309)
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCCCCEEEE
Confidence            689999999  9999999999988876  666

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=81.77  E-value=3.3  Score=41.49  Aligned_cols=86  Identities=15%  Similarity=0.227  Sum_probs=54.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec------ccc---c-CcceEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST------SYA---A-HKTKIW  419 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~------~~~---~-~~~~vw  419 (529)
                      ....|++.|++|  .||.++++.+..+|.++..  ++.++.+.++ +++..   .++...      .++   . +..+++
T Consensus       138 ~~~~vlI~g~~~--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~v  211 (323)
T cd05282         138 PGDWVIQNAANS--AVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGAD---EVIDSSPEDLAQRVKEATGGAGARLA  211 (323)
T ss_pred             CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCC---EEecccchhHHHHHHHHhcCCCceEE
Confidence            457899999998  9999999999999999887  7778888774 33321   111111      111   1 345666


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 009674          420 L--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       420 i--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                      +  +|.....+-.+.++++-+|+.+.
T Consensus       212 l~~~g~~~~~~~~~~l~~~g~~v~~g  237 (323)
T cd05282         212 LDAVGGESATRLARSLRPGGTLVNYG  237 (323)
T ss_pred             EECCCCHHHHHHHHhhCCCCEEEEEc
Confidence            6  33333333444666777777665

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional

Probab=81.58  E-value=9.3  Score=40.08  Aligned_cols=156  Identities=15%  Similarity=0.245  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHcCCcEEEecc----cccccc-------cccC-CceeeecCCC---------CcceeeecCCh--h-----
Q 009674          289 IEEAILEADAKGVKVISLGL----LNQGEE-------LNRN-GEIYLERQPN---------KLKIKVVDGSS--L-----  340 (529)
Q Consensus       289 I~~Ai~~A~k~G~kv~~LG~----ln~~e~-------ln~~-g~~~~~k~p~---------~L~irvv~Gns--l-----  340 (529)
                      .|.||   .++|.+++.|+.    +.++|.       |.+. .-+.+.|+|+         ..+|+|+.+-+  .     
T Consensus        63 Fe~A~---~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ  139 (305)
T PRK00856         63 FELAA---KRLGADVINFSASTSSVSKGETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVPVINAGDGSHQHPTQ  139 (305)
T ss_pred             HHHHH---HHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCCEEECCCCCCCCcHH
Confidence            45554   478999999975    444444       4555 6677888877         35688887732  1     


Q ss_pred             ---HHHHHHhcCcC-CCcEEEEeccc--CchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeec-ccc-
Q 009674          341 ---AAAVVVNSLPK-TTAHVLLRGTV--TANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST-SYA-  412 (529)
Q Consensus       341 ---taavv~~~i~~-~~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~-~~~-  412 (529)
                         =+.++.+.... +..+|+++|..  +  -+++..+.++++-|..+.+-..+.|+.  +++..      ..++ +.+ 
T Consensus       140 ~LaDl~Ti~e~~G~l~g~kv~~vGD~~~~--~v~~Sl~~~~~~~g~~~~~~~P~~~~~--~~~~~------~~~~~d~~e  209 (305)
T PRK00856        140 ALLDLLTIREEFGRLEGLKVAIVGDIKHS--RVARSNIQALTRLGAEVRLIAPPTLLP--EGMPE------YGVHTDLDE  209 (305)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEECCCCCC--cHHHHHHHHHHHcCCEEEEECCcccCc--ccccc------eEEECCHHH
Confidence               24566665432 45799999986  5  889999999999999999966665531  01111      1344 776 


Q ss_pred             c-CcceEEEEcCcCCh-------hhhhcCCCCceeecccccCcc---CCCCCcee-ecCCccc
Q 009674          413 A-HKTKIWLVGDDLTG-------KEQARAPKGTIFIPYTQIPPR---KLRKDCFY-HSTPAMI  463 (529)
Q Consensus       413 ~-~~~~vwivg~~~~~-------~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y-~~~~a~~  463 (529)
                      + ++++|+....+-++       ++.++..+     +| |++.+   ..|+||.+ |.+|+.+
T Consensus       210 a~~~aDvvyt~~~q~e~~~~~~~~~~~~~~~-----~y-~v~~~ll~~a~~~~~~mHcLPa~R  266 (305)
T PRK00856        210 VIEDADVVMMLRVQKERMDGGLLPSYEEYKR-----SY-GLTAERLALAKPDAIVMHPGPVNR  266 (305)
T ss_pred             HhCCCCEEEECCcccccccccchHHHHHHhc-----cC-ccCHHHHhhcCCCCEEECCCCCCC
Confidence            4 88888777443211       11222222     33 48887   55688874 8888643

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=81.52  E-value=4.8  Score=41.45  Aligned_cols=102  Identities=14%  Similarity=0.038  Sum_probs=65.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--C---cceEEE--EcCc-
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--H---KTKIWL--VGDD-  424 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~---~~~vwi--vg~~-  424 (529)
                      +|.++|.-   .+|+++|+.|.+.|.+|.+  |++++.+.+++. +...      ..+.++  +   ++++++  +-+. 
T Consensus         2 ~Ig~IGlG---~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~------~~~~~e~~~~~~~~dvvi~~v~~~~   71 (301)
T PRK09599          2 QLGMIGLG---RMGGNMARRLLRGGHEVVGYDRNPEAVEALAEE-GATG------ADSLEELVAKLPAPRVVWLMVPAGE   71 (301)
T ss_pred             EEEEEccc---HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCee------cCCHHHHHhhcCCCCEEEEEecCCc
Confidence            57888854   9999999999999999988  888888887553 2111      113332  1   244433  3221 


Q ss_pred             -CC---hhhhhcCCCCceeecccccCcc-------CCC-CCceeecCCccccCC
Q 009674          425 -LT---GKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP  466 (529)
Q Consensus       425 -~~---~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~  466 (529)
                       ..   ++-...+++|.++++.+..+|.       .++ +.+.|.+-|.+--|.
T Consensus        72 ~~~~v~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~dapvsG~~~  125 (301)
T PRK09599         72 ITDATIDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVDVGTSGGVW  125 (301)
T ss_pred             HHHHHHHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEeCCCCcCHH
Confidence             11   1112346789999999987775       122 567788877665443

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=81.48  E-value=1.5  Score=43.99  Aligned_cols=28  Identities=18%  Similarity=0.328  Sum_probs=26.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +|+|+|+||  .||+++++.|.++|.+|.+
T Consensus         1 kvlV~GatG--~iG~~l~~~l~~~g~~V~~   28 (328)
T TIGR01179         1 KILVTGGAG--YIGSHTVRQLLESGHEVVV   28 (328)
T ss_pred             CEEEeCCCC--HHHHHHHHHHHhCCCeEEE
Confidence            489999999  9999999999999999987

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=81.41  E-value=3  Score=36.12  Aligned_cols=39  Identities=23%  Similarity=0.285  Sum_probs=32.9

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      |+++|..   .+|+.+++.|.+.+.+|++  +++++.++++++-
T Consensus         1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~   41 (116)
T PF02254_consen    1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREEG   41 (116)
T ss_dssp             EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT
T ss_pred             eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc
Confidence            6789987   9999999999998888888  8888888887763

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06436 glycerate dehydrogenase; Provisional

Probab=81.25  E-value=3  Score=43.58  Aligned_cols=80  Identities=13%  Similarity=0.070  Sum_probs=54.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE--------E
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------V  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------v  421 (529)
                      ..++|-++|--   .||+++|+.|...|.+|...++...    ++   +.  . ....++++  +++++++        .
T Consensus       121 ~gktvgIiG~G---~IG~~vA~~l~afG~~V~~~~r~~~----~~---~~--~-~~~~~l~ell~~aDiv~~~lp~t~~T  187 (303)
T PRK06436        121 YNKSLGILGYG---GIGRRVALLAKAFGMNIYAYTRSYV----ND---GI--S-SIYMEPEDIMKKSDFVLISLPLTDET  187 (303)
T ss_pred             CCCEEEEECcC---HHHHHHHHHHHHCCCEEEEECCCCc----cc---Cc--c-cccCCHHHHHhhCCEEEECCCCCchh
Confidence            46789999985   9999999988788999988222110    00   00  0 00224554  5666655        2


Q ss_pred             cCcCChhhhhcCCCCceeecccc
Q 009674          422 GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                      -..++.+++.+|++|++||.++|
T Consensus       188 ~~li~~~~l~~mk~ga~lIN~sR  210 (303)
T PRK06436        188 RGMINSKMLSLFRKGLAIINVAR  210 (303)
T ss_pred             hcCcCHHHHhcCCCCeEEEECCC
Confidence            33567888999999999999999

>PLN02206 UDP-glucuronate decarboxylase

Probab=81.16  E-value=1.7  Score=47.46  Aligned_cols=30  Identities=20%  Similarity=0.215  Sum_probs=28.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .++|+|+|+||  -||+.+++.|.++|.+|..
T Consensus       119 ~~kILVTGatG--fIGs~Lv~~Ll~~G~~V~~  148 (442)
T PLN02206        119 GLRVVVTGGAG--FVGSHLVDRLMARGDSVIV  148 (442)
T ss_pred             CCEEEEECccc--HHHHHHHHHHHHCcCEEEE
Confidence            46899999999  9999999999999999987

>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]

Probab=80.99  E-value=3.5  Score=41.88  Aligned_cols=75  Identities=23%  Similarity=0.275  Sum_probs=53.1

Q ss_pred             HHHHhcCcCCCcEEEEecccCchh--hHHHHHHHHhccCcEEEe-cchhhHHHHHhhCcccc-ccceeeecccc-c-Ccc
Q 009674          343 AVVVNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVLSTSYA-A-HKT  416 (529)
Q Consensus       343 avv~~~i~~~~~~V~~~Gatg~~k--ig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~-~~~l~~~~~~~-~-~~~  416 (529)
                      +..++.++ ..+.+++.|..|.-|  ++.|++..||++|+.|+. +-.|-..+||.....+. ..      .+. . .++
T Consensus        96 ~~~~~~~~-~~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~~~~~~~~~------~l~~~l~~~  168 (254)
T COG1484          96 ASLVEFFE-RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAAFDEGRLEE------KLLRELKKV  168 (254)
T ss_pred             HHHHHHhc-cCCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHhcCchHH------HHHHHhhcC
Confidence            34445667 777899999876324  899999999999999999 77888888888755432 11      122 1 466


Q ss_pred             eEEEEcCc
Q 009674          417 KIWLVGDD  424 (529)
Q Consensus       417 ~vwivg~~  424 (529)
                      ++.|+||.
T Consensus       169 dlLIiDDl  176 (254)
T COG1484         169 DLLIIDDI  176 (254)
T ss_pred             CEEEEecc
Confidence            78787654

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=80.95  E-value=2.7  Score=43.27  Aligned_cols=62  Identities=16%  Similarity=0.247  Sum_probs=38.7

Q ss_pred             EEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHH----HhhCcc-ccccceeeec-cccc-CcceEEEE
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKL----KLRIPV-EAQHNLVLST-SYAA-HKTKIWLV  421 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l----~~~~~~-~~~~~l~~~~-~~~~-~~~~vwiv  421 (529)
                      |.++|| |  .+|+.+|..|+.+|. .|.+  +++++.+..    .+.... ..... +..+ ++++ ++++++|+
T Consensus         1 I~IIGa-G--~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t~d~~~l~dADiVIi   72 (300)
T cd01339           1 ISIIGA-G--NVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGTNDYEDIAGSDVVVI   72 (300)
T ss_pred             CEEECC-C--HHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEcCCHHHhCCCCEEEE
Confidence            578999 7  999999999998876 8888  555544322    221111 11112 3333 6776 88877663

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=80.91  E-value=3.2  Score=43.68  Aligned_cols=99  Identities=10%  Similarity=0.142  Sum_probs=64.3

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHh-ccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLC-QMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      -..++|-++|--   .||+++|+.|. --|.+|...+...-+.-..+..       +...++++  +.+|++++      
T Consensus       143 L~gktvGIiG~G---~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~-------~~~~~l~ell~~sDvv~lh~plt~  212 (323)
T PRK15409        143 VHHKTLGIVGMG---RIGMALAQRAHFGFNMPILYNARRHHKEAEERFN-------ARYCDLDTLLQESDFVCIILPLTD  212 (323)
T ss_pred             CCCCEEEEEccc---HHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcC-------cEecCHHHHHHhCCEEEEeCCCCh
Confidence            356789999985   99999999986 7898988722111010001111       11235655  66777553      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc---------CCC---CCceeecC
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  459 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~  459 (529)
                        -..++.++..+|++|+.||-++|   |+.+         +++   -|++..+-
T Consensus       213 ~T~~li~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP  267 (323)
T PRK15409        213 ETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP  267 (323)
T ss_pred             HHhhccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCC
Confidence              23567789999999999999999   5544         333   57776664

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=80.88  E-value=3.9  Score=44.09  Aligned_cols=29  Identities=31%  Similarity=0.286  Sum_probs=26.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|+.   ++|.++|+.|.++|.+|++
T Consensus         5 ~k~v~iiG~g---~~G~~~A~~l~~~G~~V~~   33 (450)
T PRK14106          5 GKKVLVVGAG---VSGLALAKFLKKLGAKVIL   33 (450)
T ss_pred             CCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence            4689999977   7999999999999999999

>PRK07201 short chain dehydrogenase; Provisional

Probab=80.87  E-value=4  Score=45.97  Aligned_cols=28  Identities=14%  Similarity=0.178  Sum_probs=25.7

Q ss_pred             EEEEecccCchhhHHHHHHHHh--ccCcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLC--QMGIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~--~~~~~v~l  384 (529)
                      +|+|+|+||  -||+.+++.|.  ++|.+|..
T Consensus         2 ~ILVTGatG--fIG~~lv~~Ll~~~~g~~V~~   31 (657)
T PRK07201          2 RYFVTGGTG--FIGRRLVSRLLDRRREATVHV   31 (657)
T ss_pred             eEEEeCCcc--HHHHHHHHHHHhcCCCCEEEE
Confidence            599999999  99999999998  68888887

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=80.84  E-value=2.7  Score=43.62  Aligned_cols=33  Identities=15%  Similarity=0.218  Sum_probs=27.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..+.++++|+...+-||+|+|+.|+++|-+|.+
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv   39 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILV   39 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence            456789999951148999999999999999999

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=80.76  E-value=2  Score=48.00  Aligned_cols=110  Identities=11%  Similarity=0.029  Sum_probs=71.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Cccccccceeeeccccc-----CcceEEE---
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA-----HKTKIWL---  420 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~-----~~~~vwi---  420 (529)
                      ...+|-++|--   ..|+++|+-|.+.|.+|.+  |+.++.+.+.++ ...+. ..+.-..+.++     ++++++|   
T Consensus         5 ~~~~IG~IGLG---~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga-~~~~~a~s~~e~v~~l~~~dvIi~~v   80 (493)
T PLN02350          5 ALSRIGLAGLA---VMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGN-LPLYGFKDPEDFVLSIQKPRSVIILV   80 (493)
T ss_pred             CCCCEEEEeeH---HHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCC-cccccCCCHHHHHhcCCCCCEEEEEC
Confidence            34578888865   8999999999999999999  889999988774 11111 11111224443     2475544   


Q ss_pred             -----EcCcCChhhhhcCCCCceeecccccCcc-------CCC-CCceeecCCccccCC
Q 009674          421 -----VGDDLTGKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP  466 (529)
Q Consensus       421 -----vg~~~~~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~  466 (529)
                           |.+.++ .=...+.+|.++||.+-++|+       +++ +.+.|.+-|+.--|.
T Consensus        81 ~~~~aV~~Vi~-gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fldapVSGG~~  138 (493)
T PLN02350         81 KAGAPVDQTIK-ALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLGMGVSGGEE  138 (493)
T ss_pred             CCcHHHHHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeCCCcCCHH
Confidence                 223331 113345799999999998776       122 566688888765444

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=80.74  E-value=2.3  Score=49.26  Aligned_cols=39  Identities=21%  Similarity=0.230  Sum_probs=31.5

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe--cchhhHHH
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l--~~~~~~~~  392 (529)
                      +.-++|.|+|| |  -+|+.||..++ +.|.+|++  .+++.+++
T Consensus       302 ~~i~~v~ViGa-G--~mG~~iA~~~a~~~G~~V~l~d~~~~~l~~  343 (699)
T TIGR02440       302 AKIKKVGILGG-G--LMGGGIASVTATKAGIPVRIKDINPQGINN  343 (699)
T ss_pred             ccccEEEEECC-c--HHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            34568999999 4  99999999888 68999999  66665554

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=80.70  E-value=2.2  Score=44.17  Aligned_cols=36  Identities=14%  Similarity=0.194  Sum_probs=29.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE  391 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~  391 (529)
                      ++|+|+|+||  =||+.+|+.|.++ |.+|..  |++++..
T Consensus         2 ~~ilVtGatG--fiGs~l~~~L~~~~~~~V~~~~r~~~~~~   40 (347)
T PRK11908          2 KKVLILGVNG--FIGHHLSKRILETTDWEVYGMDMQTDRLG   40 (347)
T ss_pred             cEEEEECCCc--HHHHHHHHHHHhCCCCeEEEEeCcHHHHH
Confidence            3699999999  9999999999865 688886  5555443

>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]

Probab=80.68  E-value=1  Score=47.29  Aligned_cols=36  Identities=19%  Similarity=0.276  Sum_probs=30.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      -++|.|+||-   .+|+.||..++.-|+.|++  ++++.++
T Consensus         3 i~kv~ViGaG---~MG~gIA~~~A~~G~~V~l~D~~~~~~~   40 (307)
T COG1250           3 IKKVAVIGAG---VMGAGIAAVFALAGYDVVLKDISPEALE   40 (307)
T ss_pred             ccEEEEEccc---chhHHHHHHHhhcCCceEEEeCCHHHHH
Confidence            3689999998   9999999999997799999  6655544

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=80.60  E-value=4.4  Score=40.72  Aligned_cols=42  Identities=19%  Similarity=0.168  Sum_probs=35.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ....|++.|++|  .+|.++++.+...|.++..  ++.++.+.+++
T Consensus       162 ~~~~vlI~ga~g--~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  205 (332)
T cd08259         162 KGDTVLVTGAGG--GVGIHAIQLAKALGARVIAVTRSPEKLKILKE  205 (332)
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence            356899999998  9999999999999999877  77777777744

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=80.57  E-value=2.6  Score=45.74  Aligned_cols=65  Identities=14%  Similarity=0.166  Sum_probs=43.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcE------EE----e-cchhhHHHHHhhCcccc---ccceeeec--cccc-Ccc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIK------VA----T-ICKDDYEKLKLRIPVEA---QHNLVLST--SYAA-HKT  416 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~------v~----l-~~~~~~~~l~~~~~~~~---~~~l~~~~--~~~~-~~~  416 (529)
                      -+|.++||+|  .||+++|..|+.+++-      ++    + +++++.+-...++....   ..+ +.++  ++++ +++
T Consensus        45 ~KV~IIGAaG--~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~-v~i~~~~y~~~kda  121 (387)
T TIGR01757        45 VNVAVSGAAG--MISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLRE-VSIGIDPYEVFEDA  121 (387)
T ss_pred             eEEEEECCCc--HHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCc-eEEecCCHHHhCCC
Confidence            4789999999  9999999999977663      33    2 56777665554433322   012 3333  6666 889


Q ss_pred             eEEEE
Q 009674          417 KIWLV  421 (529)
Q Consensus       417 ~vwiv  421 (529)
                      +|+|+
T Consensus       122 DIVVi  126 (387)
T TIGR01757       122 DWALL  126 (387)
T ss_pred             CEEEE
Confidence            88664

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=80.57  E-value=2.2  Score=43.56  Aligned_cols=91  Identities=16%  Similarity=0.239  Sum_probs=59.7

Q ss_pred             hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc--CcceEEE--EcC--cCCh-----hh-h
Q 009674          366 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL--VGD--DLTG-----KE-Q  430 (529)
Q Consensus       366 kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi--vg~--~~~~-----~~-q  430 (529)
                      .+|.++|+.|++.|.+|.+  |++++.+++++. +       +..+ +.++  ++++++|  +-+  .+..     ++ .
T Consensus         6 ~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-g-------~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~   77 (288)
T TIGR01692         6 NMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA-G-------AQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGIL   77 (288)
T ss_pred             HhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc-C-------CeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHh
Confidence            8999999999999999998  888888888654 1       1122 4443  5565544  221  1111     11 2


Q ss_pred             hcCCCCceeecccccCccC---C----C-CCceeecCCcccc
Q 009674          431 ARAPKGTIFIPYTQIPPRK---L----R-KDCFYHSTPAMII  464 (529)
Q Consensus       431 ~~a~~G~~f~~~~~~~~~~---~----R-~dc~y~~~~a~~~  464 (529)
                      ..+++|+++++.|-++|..   +    + +...|.+.|.+--
T Consensus        78 ~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vdaPv~Gg  119 (288)
T TIGR01692        78 PKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGG  119 (288)
T ss_pred             hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEECCCCCC
Confidence            2568999999999988861   1    1 4566888776543

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=80.52  E-value=2.2  Score=46.60  Aligned_cols=62  Identities=27%  Similarity=0.289  Sum_probs=45.3

Q ss_pred             eeeecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          332 IKVVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       332 irvv~Gnsltaavv~-~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ++.++|.+--+++=. +.-..+...|+|+||||  ++|+=+.+.|-++|..|..  |++++-+++-.
T Consensus        57 ~~~~~~~~~e~~v~~~~~~~~~~~~VlVvGatG--~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   57 ISPVTGTTSEAEVSPPNNNSKKPTTVLVVGATG--KVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCccccccceeeeccCCCCCCCCCeEEEecCCC--chhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            455555544443321 12233577999999999  9999999999999988887  88888777655

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=80.47  E-value=3.6  Score=47.11  Aligned_cols=46  Identities=20%  Similarity=0.281  Sum_probs=39.5

Q ss_pred             cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          348 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       348 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ++++.+++|.++|..   .+|+.+|+.|.++|+++++  .|+++.++++++
T Consensus       395 ~~~~~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~  442 (621)
T PRK03562        395 EIDEQQPRVIIAGFG---RFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF  442 (621)
T ss_pred             ccccccCcEEEEecC---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc
Confidence            344456899999998   9999999999999999988  888899988764

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=80.41  E-value=3.1  Score=43.09  Aligned_cols=29  Identities=21%  Similarity=0.314  Sum_probs=25.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..+|.++| .|  .||+.+|+.|.++|..+.+
T Consensus         3 ~~~v~IvG-~G--liG~s~a~~l~~~g~~v~i   31 (279)
T COG0287           3 SMKVGIVG-LG--LMGGSLARALKEAGLVVRI   31 (279)
T ss_pred             CcEEEEEC-Cc--hHHHHHHHHHHHcCCeEEE
Confidence            34677777 77  9999999999999999976

>PTZ00117 malate dehydrogenase; Provisional

Probab=80.40  E-value=3.6  Score=43.14  Aligned_cols=67  Identities=15%  Similarity=0.207  Sum_probs=40.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhh---Cccccccc-eeee-ccccc-CcceEEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLR---IPVEAQHN-LVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~---~~~~~~~~-l~~~-~~~~~-~~~~vwiv  421 (529)
                      +..+|.++|| |  .||+.+|..|+..| ..+.|  .++++.+.....   ........ -+.. +++++ ++++++|+
T Consensus         4 ~~~KI~IIGa-G--~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~~l~~ADiVVi   79 (319)
T PTZ00117          4 KRKKISMIGA-G--QIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYEDIKDSDVVVI   79 (319)
T ss_pred             CCcEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHHHhCCCCEEEE
Confidence            4568999998 7  99999999999888 46666  555544321111   11111111 1233 37776 88877663

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=80.35  E-value=3.5  Score=46.18  Aligned_cols=83  Identities=16%  Similarity=0.129  Sum_probs=55.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------  421 (529)
                      ..++|.++|--   .||+.+|+.|...|.+|...+...-.+-..+.+.+       ..++++  +.++++++        
T Consensus       139 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~-------~~~l~ell~~aDiV~l~lP~t~~t  208 (526)
T PRK13581        139 YGKTLGIIGLG---RIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVE-------LVSLDELLARADFITLHTPLTPET  208 (526)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCE-------EEcHHHHHhhCCEEEEccCCChHh
Confidence            45789999985   99999999999999999882221101001111111       114554  56666542        


Q ss_pred             cCcCChhhhhcCCCCceeecccc
Q 009674          422 GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                      -..++.+...+||+|++++.++|
T Consensus       209 ~~li~~~~l~~mk~ga~lIN~aR  231 (526)
T PRK13581        209 RGLIGAEELAKMKPGVRIINCAR  231 (526)
T ss_pred             hcCcCHHHHhcCCCCeEEEECCC
Confidence            24566788999999999999999

>cd08293 PTGR2 Prostaglandin reductase

Probab=80.30  E-value=4.8  Score=41.16  Aligned_cols=85  Identities=11%  Similarity=0.185  Sum_probs=56.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec--cc----cc---CcceEEE-
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY----AA---HKTKIWL-  420 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~~----~~---~~~~vwi-  420 (529)
                      ..|++.|++|  -+|.++++.+...|. +|..  +++++.+.++++++...   .+...  ++    ++   ...++++ 
T Consensus       156 ~~VlI~ga~g--~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~---vi~~~~~~~~~~i~~~~~~gvd~vid  230 (345)
T cd08293         156 QTMVVSGAAG--ACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA---AINYKTDNVAERLRELCPEGVDVYFD  230 (345)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE---EEECCCCCHHHHHHHHCCCCceEEEE
Confidence            7899999998  999999998888898 6766  78888888887655432   11111  21    11   2346666 


Q ss_pred             -EcCcCChhhhhcCCCCceeeccc
Q 009674          421 -VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       421 -vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                       +|.....+-...+.+|-.++.+.
T Consensus       231 ~~g~~~~~~~~~~l~~~G~iv~~G  254 (345)
T cd08293         231 NVGGEISDTVISQMNENSHIILCG  254 (345)
T ss_pred             CCCcHHHHHHHHHhccCCEEEEEe
Confidence             33322344455667777777765

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=80.10  E-value=4.4  Score=40.67  Aligned_cols=43  Identities=21%  Similarity=0.311  Sum_probs=35.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ...|++.|++|  .+|.++++.+...|.+|.+  +++++.+.++ +++
T Consensus       147 ~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g  191 (325)
T cd05280         147 DGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLG  191 (325)
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC
Confidence            45899999998  9999999888899999876  7888888774 444

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=80.07  E-value=3.8  Score=40.76  Aligned_cols=30  Identities=27%  Similarity=0.283  Sum_probs=26.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..++|++.|- |  .||+.+|+.|.++|.+++.
T Consensus        22 ~g~~vaIqGf-G--nVG~~~a~~L~~~G~~vV~   51 (217)
T cd05211          22 EGLTVAVQGL-G--NVGWGLAKKLAEEGGKVLA   51 (217)
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCEEEE
Confidence            4679999996 5  9999999999999887666

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=80.05  E-value=2.8  Score=43.82  Aligned_cols=64  Identities=16%  Similarity=0.251  Sum_probs=40.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc----cc-eeeeccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ----HN-LVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~----~~-l~~~~~~~~-~~~~vwiv  421 (529)
                      +|.++|+ |  .||+++|..|+.+++  .+.|  .++++.+-....+.....    .+ -+...+|++ ++++|+|+
T Consensus         1 Ki~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvi   74 (307)
T cd05290           1 KLVVIGA-G--HVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVI   74 (307)
T ss_pred             CEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEE
Confidence            4789999 7  999999999997776  3444  566655544333333211    12 123337777 89988774

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=80.03  E-value=2.5  Score=42.36  Aligned_cols=82  Identities=13%  Similarity=0.147  Sum_probs=49.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEE---Ee--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCc---
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKV---AT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD---  424 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v---~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~---  424 (529)
                      +|.++| +|  .+|+++++.|.+.|..+   .+  |++++.++++++.+...     -..+.++  +++++++..-.   
T Consensus         2 ~IgiIG-~G--~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~-----~~~~~~~~~~~aDvVilav~p~~   73 (258)
T PRK06476          2 KIGFIG-TG--AITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVR-----IAKDNQAVVDRSDVVFLAVRPQI   73 (258)
T ss_pred             eEEEEC-cC--HHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCce-----EeCCHHHHHHhCCEEEEEeCHHH
Confidence            478889 55  99999999999877542   34  88888888877653111     0224443  45666442111   


Q ss_pred             CCh-hhhhcCCCCceeecccc
Q 009674          425 LTG-KEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       425 ~~~-~~q~~a~~G~~f~~~~~  444 (529)
                      +.+ -++.+..+|.+++..+-
T Consensus        74 ~~~vl~~l~~~~~~~vis~~a   94 (258)
T PRK06476         74 AEEVLRALRFRPGQTVISVIA   94 (258)
T ss_pred             HHHHHHHhccCCCCEEEEECC
Confidence            111 11224567888877664

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=80.03  E-value=3.1  Score=41.64  Aligned_cols=45  Identities=18%  Similarity=0.186  Sum_probs=36.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+-+.++|+..  -||+|||..|+++|.+|..  ++.+.-+.-...++.
T Consensus        14 sk~~~vtGg~s--GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g   60 (256)
T KOG1200|consen   14 SKVAAVTGGSS--GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG   60 (256)
T ss_pred             cceeEEecCCc--hHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence            45667888885  9999999999999999999  666666766666655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	529
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.8 bits (123), Expect = 5e-07
 Identities = 79/577 (13%), Positives = 167/577 (28%), Gaps = 171/577 (29%)

Query: 41  HHHYLYSRYHSHHHSSVVTEPI----TSVIHPFAEHIVY-FLLFAIPLVTTMVLKNASIA 95
           HHH        HHH    T         ++  F +  V  F    +  +   +L    I 
Sbjct: 1   HHH--------HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID 52

Query: 96  SFVG---------YI----------IYVDFMNNMGHCNFEFIPMWLFTVF------PPLK 130
             +           +          +   F+  +   N++    +L +        P + 
Sbjct: 53  HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK----FLMSPIKTEQRQPSMM 108

Query: 131 FLMYTPSYHSLH----------------HTQFRTN-YSLFMPIYDYIYGTIDRSSDSVYE 173
             MY      L+                + + R     L       I G +  S  +   
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG-SGKTWVA 167

Query: 174 KSLKRSGEEEEESADDVDVVHLTHLTTPESI--------YHLRIGFASLASKPHRYTYTL 225
             +  S + + +    +  ++L +  +PE++        Y +   + S +         +
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 226 SQWYLQLLWPFTASCSVLVSWIYGRTF-----VSESNTLDKLKL--QTWVVPRYIVQYNL 278
                +L         +L S  Y         V  +   +   L  +  +  R+      
Sbjct: 228 HSIQAELR-------RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF------ 274

Query: 279 PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI---YLERQPNKLKIKVV 335
              ++  + L         A     ISL   +     +    +   YL+ +P  L  +V+
Sbjct: 275 ---KQVTDFL--------SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323

Query: 336 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKL 395
             +    +++  S+    A       V  +K+   + SSL  +        +  +++L +
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE---PAEYRKMFDRLSV 380

Query: 396 -----RIPVEAQHNLVLSTSYAAHKTKIW---------LVGDDLTGKE--QARAPKGTIF 439
                 IP       +LS         IW         +V + L      + +  + TI 
Sbjct: 381 FPPSAHIPTI-----LLSL--------IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427

Query: 440 IPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWD 499
           IP   +   +L+               +   +H       R ++  + I       + +D
Sbjct: 428 IPSIYL---ELKVKL-----------ENEYALH-------RSIVDHYNI------PKTFD 460

Query: 500 LNECGQTMCD----IHQVWH-ASLRHG-----FRPLF 526
            ++      D     H   H  ++ H      FR +F
Sbjct: 461 SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	529
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.29
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.91
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.83
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.77
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.76
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.73
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.63
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.59
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.58
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.57
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.55
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.55
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.54
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.53
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.52
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.51
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.51
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.48
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.47
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.46
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.45
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.44
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.41
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.39
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.37
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.36
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.36
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.36
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.35
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.35
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.34
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.34
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.33
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.32
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.32
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.31
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.3
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.3
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.3
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.28
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.27
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.27
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.26
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	96.26
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.26
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.24
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.24
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	96.24
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.23
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.23
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.22
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.22
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.22
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.21
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.21
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.21
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.2
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.19
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.18
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.17
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.17
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.17
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.16
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.16
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.16
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.15
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.14
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.14
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.14
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.14
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.13
1spx_A	278	Short-chain reductase family member (5L265); paral	96.13
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.13
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.11
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.11
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.11
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.11
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.11
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.11
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.1
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.1
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.1
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.09
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.08
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.07
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.07
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.06
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.06
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.06
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.06
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.05
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.05
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.04
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.04
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.02
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.99
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.99
1xkq_A	280	Short-chain reductase family member (5D234); parra	95.98
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.98
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	95.98
3cxt_A	291	Dehydrogenase with different specificities; rossma	95.98
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.96
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	95.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.94
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	95.93
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.93
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.92
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.92
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.91
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.91
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	95.91
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.91
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	95.88
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	95.86
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.86
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.86
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.85
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	95.85
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.84
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.83
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.83
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	95.83
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.83
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.83
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.82
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.8
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.79
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	95.79
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	95.79
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.79
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	95.79
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.78
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	95.77
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.76
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.76
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	95.76
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.75
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.75
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.74
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.73
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.71
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.68
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.67
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.66
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.63
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	95.63
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.63
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.61
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.61
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.6
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	95.59
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.59
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.58
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.58
4f6c_A	427	AUSA reductase domain protein; thioester reductase	95.57
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.56
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.55
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.54
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.53
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	95.52
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.49
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	95.47
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.47
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	95.46
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	95.44
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	95.44
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	95.44
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	95.43
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.42
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.39
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	95.38
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.38
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.36
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.36
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	95.33
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	95.32
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.31
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.31
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.29
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	95.29
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.27
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.27
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.27
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.27
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.26
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	95.22
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.21
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.18
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.18
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.13
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.12
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.1
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.09
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.09
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.09
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	95.08
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.07
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	95.07
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	95.03
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	95.03
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	94.99
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	94.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	94.96
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	94.92
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	94.92
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	94.89
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	94.89
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	94.88
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	94.84
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	94.82
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	94.8
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.78
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	94.78
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	94.77
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	94.77
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	94.75
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	94.73
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.73
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	94.71
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	94.67
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	94.67
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	94.66
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	94.6
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.59
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	94.59
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.56
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	94.56
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	94.55
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.55
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	94.53
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	94.52
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	94.51
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	94.48
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	94.47
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	94.47
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	94.46
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	94.45
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	94.44
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	94.43
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	94.43
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	94.41
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	94.4
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.39
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	94.39
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	94.38
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	94.37
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	94.37
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	94.37
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	94.36
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	94.32
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	94.29
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	94.24
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	94.19
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	94.16
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	94.13
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	94.1
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	94.1
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	94.08
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	94.06
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	94.05
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	93.98
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	93.93
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	93.92
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	93.9
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	93.9
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	93.88
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	93.88
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	93.86
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	93.81
1xq6_A	253	Unknown protein; structural genomics, protein stru	93.77
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	93.75
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	93.75
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	93.72
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	93.59
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	93.59
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	93.58
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	93.56
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	93.53
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	93.52
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	93.5
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	93.48
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	93.45
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	93.41
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	93.38
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	93.3
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	93.29
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	93.28
4f6l_B	508	AUSA reductase domain protein; thioester reductase	93.26
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	93.25
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	93.24
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	93.22
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	93.21
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	93.21
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	93.21
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	93.18
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	93.15
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	93.11
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	93.07
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	93.06
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	93.05
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	93.0
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	92.97
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	92.96
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	92.95
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	92.91
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	92.91
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	92.88
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	92.87
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	92.82
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	92.74
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	92.72
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	92.67
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	92.67
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	92.63
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	92.63
3qha_A	296	Putative oxidoreductase; seattle structural genomi	92.61
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	92.61
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	92.6
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	92.59
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	92.57
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	92.57
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	92.56
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	92.54
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	92.52
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	92.49
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	92.35
3tl2_A	315	Malate dehydrogenase; center for structural genomi	92.33
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	92.32
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	92.23
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	92.2
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	92.2
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	92.19
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	92.18
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	92.09
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	91.99
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	91.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	91.92
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	91.89
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	91.85
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	91.85
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	91.84
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	91.84
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	91.77
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	91.75
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	91.75
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	91.73
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	91.72
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	91.69
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	91.68
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	91.62
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	91.61
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	91.52
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	91.51
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	91.48
4ezb_A	317	Uncharacterized conserved protein; structural geno	91.46
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	91.4
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	91.4
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	91.4
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	91.39
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	91.28
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	91.27
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	91.27
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	91.26
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	91.23
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	91.21
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	91.19
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	91.17
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	91.16
4ep1_A	340	Otcase, ornithine carbamoyltransferase; structural	91.14
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	91.05
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	91.04
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	91.02
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	90.98
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	90.98
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	90.97
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	90.96
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	90.88
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	90.83
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	90.82
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	90.8
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	90.8
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	90.73
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	90.69
4f2g_A	309	Otcase 1, ornithine carbamoyltransferase 1; struct	90.66
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	90.6
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	90.56
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	90.55
4g65_A	461	TRK system potassium uptake protein TRKA; structur	90.52
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	90.52
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	90.49
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	90.49
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	90.48
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	90.38
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	90.36
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	90.32
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	90.28
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	90.28
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	90.27
3gd5_A	323	Otcase, ornithine carbamoyltransferase; structural	90.22
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	90.2
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	90.11
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	90.08
2i6u_A	307	Otcase, ornithine carbamoyltransferase; X-RAY crys	90.03
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	89.93
2qrj_A	394	Saccharopine dehydrogenase, NAD+, L-lysine- formin	89.89
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	89.87
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	89.83
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	89.77
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	89.77
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	89.76
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	89.73
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	89.71
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	89.69
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	89.67
3c85_A	183	Putative glutathione-regulated potassium-efflux S	89.66
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	89.66
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	89.66
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	89.65
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	89.64
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	89.61
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	89.57
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	89.53
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	89.33
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	89.29
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	89.26
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	89.23
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	89.21
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	89.16
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	89.08
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	89.01
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	88.99
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	88.96
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	88.95
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	88.93
3csu_A	310	Protein (aspartate carbamoyltransferase); transfer	88.88
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	88.87
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	88.86
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	88.83
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	88.83
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	88.7
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	88.68
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	88.68
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	88.67
1vlv_A	325	Otcase, ornithine carbamoyltransferase; TM1097, st	88.59
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	88.59
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	88.57
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	88.52
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	88.52
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	88.48
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	88.46
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	88.46
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	88.38
1pvv_A	315	Otcase, ornithine carbamoyltransferase; dodecamer;	88.25
1oth_A	321	Protein (ornithine transcarbamoylase); transferase	88.2
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	88.17
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	88.09
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	88.04
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	87.91
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	87.86
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	87.83
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	87.83
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	87.8
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	87.78
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	87.73
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	87.72
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	87.65
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	87.61
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	87.54
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	87.51
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	87.45
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	87.43
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	87.42
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	87.31
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	87.28
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	87.26
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	87.26
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	87.18
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	87.12
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	87.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	86.99
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	86.98
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	86.97
4a8t_A	339	Putrescine carbamoyltransferase; trabnsferase PALO	86.9
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	86.87
4eye_A	342	Probable oxidoreductase; structural genomics, niai	86.83
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	86.83
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	86.73
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	86.73
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	86.67
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	86.65
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	86.63
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	86.59
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	86.53
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	86.49
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	86.48
1ml4_A	308	Aspartate transcarbamoylase; beta pleated sheet, p	86.48
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	86.47
4e4y_A	244	Short chain dehydrogenase family protein; structur	86.42

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.29  E-value=0.00026  Score=62.82  Aligned_cols=88  Identities=19%  Similarity=0.234  Sum_probs=59.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--cCcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDL  425 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~  425 (529)
                      ..++|.++|+ |  .+|+++++.|.++|.+|.+  |++++.+++.++.+...    ....++++  ++++++|.  +..-
T Consensus        20 ~~~~v~iiG~-G--~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~----~~~~~~~~~~~~~Divi~at~~~~   92 (144)
T 3oj0_A           20 GGNKILLVGN-G--MLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY----VLINDIDSLIKNNDVIITATSSKT   92 (144)
T ss_dssp             CCCEEEEECC-S--HHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE----EECSCHHHHHHTCSEEEECSCCSS
T ss_pred             cCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce----EeecCHHHHhcCCCEEEEeCCCCC
Confidence            4779999997 7  9999999999999999777  89999998887754211    12235543  56777662  2211


Q ss_pred             ChhhhhcCCCCceeecccccCc
Q 009674          426 TGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       426 ~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                      ...+....++|.++++++ +|+
T Consensus        93 ~~~~~~~l~~g~~vid~~-~p~  113 (144)
T 3oj0_A           93 PIVEERSLMPGKLFIDLG-NPP  113 (144)
T ss_dssp             CSBCGGGCCTTCEEEECC-SSC
T ss_pred             cEeeHHHcCCCCEEEEcc-CCc
Confidence            111123457788888887 443

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.91  E-value=0.0014  Score=65.85  Aligned_cols=105  Identities=13%  Similarity=0.079  Sum_probs=65.3

Q ss_pred             ecCChhHHHHHHhc-CcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecc
Q 009674          335 VDGSSLAAAVVVNS-LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS  410 (529)
Q Consensus       335 v~Gnsltaavv~~~-i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~  410 (529)
                      |||.....+..-.. +....++|+|+|+ |  .+|+++|..|++.|. +|++  |+.++.++|.+++..... ..+...+
T Consensus       122 Td~~G~~~~l~~~~~~~l~~~~vlVlGa-G--g~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~~~~~~~  197 (297)
T 2egg_A          122 TDGLGYVQALEEEMNITLDGKRILVIGA-G--GGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-AYFSLAE  197 (297)
T ss_dssp             CHHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-CEECHHH
T ss_pred             CCHHHHHHHHHHhCCCCCCCCEEEEECc-H--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-ceeeHHH
Confidence            45544444443333 4445678999998 6  799999999999998 8888  899999999988754221 1111123


Q ss_pred             ccc--CcceEEEE--cCcCCh------hhhhcCCCCceeeccc
Q 009674          411 YAA--HKTKIWLV--GDDLTG------KEQARAPKGTIFIPYT  443 (529)
Q Consensus       411 ~~~--~~~~vwiv--g~~~~~------~~q~~a~~G~~f~~~~  443 (529)
                      +++  .+++++|.  +....+      -+....++|++++|.+
T Consensus       198 ~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~  240 (297)
T 2egg_A          198 AETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDII  240 (297)
T ss_dssp             HHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECC
T ss_pred             HHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence            432  56777772  222211      1122345677777766

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.83  E-value=0.00024  Score=71.32  Aligned_cols=150  Identities=13%  Similarity=0.088  Sum_probs=84.6

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  411 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~  411 (529)
                      |||-....+.--..+....++|+++|+ |  -+|+++|..|.+.|. +|++  |+.++.++|.+++...      ...++
T Consensus        99 TD~~G~~~~L~~~~~~l~~k~vlvlGa-G--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~------~~~~~  169 (277)
T 3don_A           99 TDGIGYVNGLKQIYEGIEDAYILILGA-G--GASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI------NLSHA  169 (277)
T ss_dssp             CHHHHHHHHHHHHSTTGGGCCEEEECC-S--HHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEE------CHHHH
T ss_pred             ChHHHHHHHHHHhCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccc------cHhhH
Confidence            566555555432334445678999998 5  799999999999998 7888  8888877665432110      11233


Q ss_pred             cc--CcceEEE----EcC--cCC-hhhhhcCCCCceeecccccCcc-----CCC-CCceeecCCccccCCCCcccccccc
Q 009674          412 AA--HKTKIWL----VGD--DLT-GKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNMHSCEN  476 (529)
Q Consensus       412 ~~--~~~~vwi----vg~--~~~-~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~~~~~e~  476 (529)
                      ++  ++++++|    +|-  ..+ +-+....++|++++|++-.|..     +.| +-|.+..+..|-+=   |...++|.
T Consensus       170 ~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~---Qa~~~f~l  246 (277)
T 3don_A          170 ESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVH---QGAESFKI  246 (277)
T ss_dssp             HHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSCHHHHHHHHTTCCEECTHHHHHH---HHHHHHHH
T ss_pred             HHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCCHHHHHHHHCcCEEeCCHHHHHH---HHHHHHHH
Confidence            32  4667777    321  000 1123456889999998844433     222 56777777776543   23333445


Q ss_pred             ccCcchhHHHHHhhHhhhhc
Q 009674          477 WLGRRVMSAWRIAGIIHALE  496 (529)
Q Consensus       477 ~~p~r~~~Ac~a~~~v~alE  496 (529)
                      |..++.=...+-+.+..+++
T Consensus       247 wtg~~~~~~~~~~~l~~~~~  266 (277)
T 3don_A          247 WTNLEPDIKAMKNIVIQKLK  266 (277)
T ss_dssp             HHSSCCCHHHHHHHHHHHHT
T ss_pred             HcCCCCCHHHHHHHHHHHhh
Confidence            44333222333444444443

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.77  E-value=0.0047  Score=60.94  Aligned_cols=66  Identities=14%  Similarity=0.149  Sum_probs=48.6

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-C--cceEEE
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-H--KTKIWL  420 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~--~~~vwi  420 (529)
                      +.-..++|+++|+ |  -+|+++|+.|++.|.+|++  |+.++.+++++++....  . +.+.++++ .  .++++|
T Consensus       115 ~~l~~k~vlViGa-G--g~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~--~-~~~~~~~~~~~~~~DivV  185 (271)
T 1nyt_A          115 FIRPGLRILLIGA-G--GASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--S-IQALSMDELEGHEFDLII  185 (271)
T ss_dssp             CCCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--S-EEECCSGGGTTCCCSEEE
T ss_pred             cCcCCCEEEEECC-c--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC--C-eeEecHHHhccCCCCEEE
Confidence            3334578999998 6  7999999999999999988  89999999988865421  1 22333333 2  567777

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.76  E-value=0.0014  Score=69.85  Aligned_cols=138  Identities=16%  Similarity=0.184  Sum_probs=92.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~  423 (529)
                      ..++|.++|. |  .||+++|+.|...|.+|+.  ++..+.+..... +       .+..++++  +.+||++.    ..
T Consensus       210 ~GktVgIiG~-G--~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~-G-------~~~~sL~eal~~ADVVilt~gt~~  278 (436)
T 3h9u_A          210 AGKTACVCGY-G--DVGKGCAAALRGFGARVVVTEVDPINALQAAME-G-------YQVLLVEDVVEEAHIFVTTTGNDD  278 (436)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-T-------CEECCHHHHTTTCSEEEECSSCSC
T ss_pred             cCCEEEEEee-C--HHHHHHHHHHHHCCCEEEEECCChhhhHHHHHh-C-------CeecCHHHHHhhCCEEEECCCCcC
Confidence            4679999995 4  9999999999999999998  444333322111 1       12335654  66777663    24


Q ss_pred             cCChhhhhcCCCCceeecccccCc----cCC----------CCCce-e--ecCCccc-cC-CCCccccccccccCcchhH
Q 009674          424 DLTGKEQARAPKGTIFIPYTQIPP----RKL----------RKDCF-Y--HSTPAMI-IP-PSLSNMHSCENWLGRRVMS  484 (529)
Q Consensus       424 ~~~~~~q~~a~~G~~f~~~~~~~~----~~~----------R~dc~-y--~~~~a~~-~P-~~~~~~~~~e~~~p~r~~~  484 (529)
                      .|+.+....|++|+++|.+++.++    ..+          |..+. |  +++-.+. +. +.+-|+. |-.+.|..+|+
T Consensus       279 iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~~~~~ir~~vd~y~~~dg~~I~LLaeGrLvNl~-~~~Ghp~~vm~  357 (436)
T 3h9u_A          279 IITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQVDRYTMANGRHIILLAEGRLVNLG-CASGHPSFVMS  357 (436)
T ss_dssp             SBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHHCSEEEEEETTEEEEECTTSCEEEEEGGGSCHHHH-HSCCSCHHHHH
T ss_pred             ccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhhcCceEeecCCceEEEcCCCCEEEEecCCCeeccc-CCCCChHHHhh
Confidence            688899999999999999998554    222          21111 1  2211221 22 2366686 99999999999


Q ss_pred             HHHHhhHhhhhcCCCCC
Q 009674          485 AWRIAGIIHALEGWDLN  501 (529)
Q Consensus       485 Ac~a~~~v~alEgw~~~  501 (529)
                      ..++.-.+-..|=|..+
T Consensus       358 ~sf~~q~la~~~l~~~~  374 (436)
T 3h9u_A          358 NSFCNQVLAQIELWTNR  374 (436)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCC
Confidence            99999888877777654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.73  E-value=0.0017  Score=61.37  Aligned_cols=44  Identities=20%  Similarity=0.295  Sum_probs=39.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++..
T Consensus         3 k~vlITGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   48 (235)
T 3l77_A            3 KVAVITGASR--GIGEAIARALARDGYALALGARSVDRLEKIAHELMQ   48 (235)
T ss_dssp             CEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            5789999998  9999999999999999998  999999988887653

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.63  E-value=0.0069  Score=65.45  Aligned_cols=139  Identities=16%  Similarity=0.159  Sum_probs=93.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--E--cC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V--GD  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--v--g~  423 (529)
                      ..+.|+|+|+.   .||+++|+.|.+.|.+|.+  ++.++.++...+.        ..+++.++  +.+++++  .  -+
T Consensus       264 ~GKtVvVtGaG---gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g--------~dv~~lee~~~~aDvVi~atG~~~  332 (488)
T 3ond_A          264 AGKVAVVAGYG---DVGKGCAAALKQAGARVIVTEIDPICALQATMEG--------LQVLTLEDVVSEADIFVTTTGNKD  332 (488)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT--------CEECCGGGTTTTCSEEEECSSCSC
T ss_pred             cCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhC--------CccCCHHHHHHhcCEEEeCCCChh
Confidence            56789999975   8999999999999999998  6666666554431        12445553  5566655  2  36


Q ss_pred             cCChhhhhcCCCCceeecccccCcc-------CC--------CCCce---eec-CCccc--cCCCCccccccccccCcch
Q 009674          424 DLTGKEQARAPKGTIFIPYTQIPPR-------KL--------RKDCF---YHS-TPAMI--IPPSLSNMHSCENWLGRRV  482 (529)
Q Consensus       424 ~~~~~~q~~a~~G~~f~~~~~~~~~-------~~--------R~dc~---y~~-~~a~~--~P~~~~~~~~~e~~~p~r~  482 (529)
                      .++.+....+++|++++..+..+.+       ..        |..+.   +.. ..++.  -.+.+-|+. |-.+.|..+
T Consensus       333 vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLaeGRIVNls-S~~G~p~~v  411 (488)
T 3ond_A          333 IIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLG-CATGHPSFV  411 (488)
T ss_dssp             SBCHHHHTTSCTTEEEEESSSTTTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEGGGSCHHHH-HSCCSCHHH
T ss_pred             hhhHHHHHhcCCCeEEEEcCCCCcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHcCCcEEEEe-cCcccCccc
Confidence            7888899999999999988864221       11        11111   111 12221  224455665 677999999


Q ss_pred             hHHHHHhhHhhhhcCCCCCc
Q 009674          483 MSAWRIAGIIHALEGWDLNE  502 (529)
Q Consensus       483 ~~Ac~a~~~v~alEgw~~~e  502 (529)
                      |+.-++.-.+-..|-|...+
T Consensus       412 m~~sfa~Q~la~~~l~~~~~  431 (488)
T 3ond_A          412 MSCSFTNQVIAQLELWNEKS  431 (488)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccHHHHHHHHHHHHhCCC
Confidence            99988887777777777654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.59  E-value=0.0033  Score=62.48  Aligned_cols=101  Identities=12%  Similarity=0.094  Sum_probs=63.5

Q ss_pred             ChhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc--ccc-eee
Q 009674          338 SSLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA--QHN-LVL  407 (529)
Q Consensus       338 nsltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~--~~~-l~~  407 (529)
                      || +.+.+.+.+.     -..+.|+++|+.   -+|+++|+.|++.| +|++  |+.++.+++++++....  ... -+.
T Consensus       109 nT-d~~G~~~~L~~~~~~l~~k~vlV~GaG---giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d  183 (287)
T 1nvt_A          109 NT-DGIGARMALEEEIGRVKDKNIVIYGAG---GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVK  183 (287)
T ss_dssp             CC-HHHHHHHHHHHHHCCCCSCEEEEECCS---HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEE
T ss_pred             cC-CHHHHHHHHHHhCCCcCCCEEEEECch---HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEE
Confidence            44 5555555543     245789999985   79999999999999 9998  88899999987764321  000 023


Q ss_pred             eccccc--CcceEEE--EcCcCCh------h-hhhcCCCCceeeccc
Q 009674          408 STSYAA--HKTKIWL--VGDDLTG------K-EQARAPKGTIFIPYT  443 (529)
Q Consensus       408 ~~~~~~--~~~~vwi--vg~~~~~------~-~q~~a~~G~~f~~~~  443 (529)
                      ++++.+  ..++++|  +|....+      - +....++|++++|++
T Consensus       184 ~~~~~~~~~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~  230 (287)
T 1nvt_A          184 FSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLI  230 (287)
T ss_dssp             EECTTCCCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred             EeeHHHhhCCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            444433  5678877  3322211      0 223446677777766

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.58  E-value=0.0023  Score=65.43  Aligned_cols=126  Identities=14%  Similarity=0.113  Sum_probs=77.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc---hhhHHHHHhhCccccccceeee
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC---KDDYEKLKLRIPVEAQHNLVLS  408 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~---~~~~~~l~~~~~~~~~~~l~~~  408 (529)
                      |||-....+.--..+.-..++|+|+|+ |  -+|+|+|..|++.|. +|++  |+   .++.+++.+++....... +.+
T Consensus       136 TD~~Gf~~~L~~~~~~l~gk~~lVlGa-G--G~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~-~~~  211 (315)
T 3tnl_A          136 TDGTGYMRALKEAGHDIIGKKMTICGA-G--GAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCK-AQL  211 (315)
T ss_dssp             CHHHHHHHHHHHTTCCCTTSEEEEECC-S--HHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCE-EEE
T ss_pred             CCHHHHHHHHHHcCCCccCCEEEEECC-C--hHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCc-eEE
Confidence            555554444322334445779999998 5  799999999999998 7888  88   888888888765543222 112


Q ss_pred             cc------ccc--CcceEEE----EcCc----CChh-hhhcCCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674          409 TS------YAA--HKTKIWL----VGDD----LTGK-EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       409 ~~------~~~--~~~~vwi----vg~~----~~~~-~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  464 (529)
                      .+      +++  ++++++|    +|-.    -.|- +....+++.+++|+.=-|.+     +.| +-|.+..+..|-+
T Consensus       212 ~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~~~~Gl~MLv  290 (315)
T 3tnl_A          212 FDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMML  290 (315)
T ss_dssp             EETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCHHHHHHHHTTCEEECSHHHHH
T ss_pred             eccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeEeCcHHHHH
Confidence            12      222  4668887    3311    0111 33346788888888843332     222 5677777776654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.57  E-value=0.0016  Score=65.31  Aligned_cols=100  Identities=13%  Similarity=0.152  Sum_probs=66.0

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  411 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~  411 (529)
                      |||-....+.--..+.-..++|+++|+ |  -+|+++|..|++.|. +|.+  |+.++.++|.+++....  . +.+.++
T Consensus       108 TD~~G~~~~L~~~~~~l~~k~vlvlGa-G--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~-~~~~~~  181 (281)
T 3o8q_A          108 TDGEGLVQDLLAQQVLLKGATILLIGA-G--GAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--E-VKAQAF  181 (281)
T ss_dssp             CHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--C-EEEEEG
T ss_pred             cHHHHHHHHHHHhCCCccCCEEEEECc-h--HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--C-eeEeeH
Confidence            566555555422233446789999998 5  799999999999997 8888  99999999988865422  1 222244


Q ss_pred             cc--CcceEEE----EcC-----cCChhhhhcCCCCceeeccc
Q 009674          412 AA--HKTKIWL----VGD-----DLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       412 ~~--~~~~vwi----vg~-----~~~~~~q~~a~~G~~f~~~~  443 (529)
                      ++  ++++++|    +|-     .++.   ...++|++++|.+
T Consensus       182 ~~l~~~aDiIInaTp~gm~~~~~~l~~---~~l~~~~~V~Dlv  221 (281)
T 3o8q_A          182 EQLKQSYDVIINSTSASLDGELPAIDP---VIFSSRSVCYDMM  221 (281)
T ss_dssp             GGCCSCEEEEEECSCCCC----CSCCG---GGEEEEEEEEESC
T ss_pred             HHhcCCCCEEEEcCcCCCCCCCCCCCH---HHhCcCCEEEEec
Confidence            43  5678877    221     1221   2346777777776

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.55  E-value=0.0055  Score=61.15  Aligned_cols=101  Identities=15%  Similarity=0.128  Sum_probs=63.3

Q ss_pred             ecCChhHHHHHHhc--CcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeec
Q 009674          335 VDGSSLAAAVVVNS--LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST  409 (529)
Q Consensus       335 v~Gnsltaavv~~~--i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~  409 (529)
                      |||-....+ +++.  +....++|+++|+ |  -+|++++..|++.|+ +|++  |+.++.++|.+++.. .  . +.+.
T Consensus       101 TD~~G~~~~-lL~~~~~~l~~k~~lvlGa-G--g~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~--~-~~~~  172 (272)
T 3pwz_A          101 FDGIGLLRD-IEENLGEPLRNRRVLLLGA-G--GAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S--R-LRIS  172 (272)
T ss_dssp             CHHHHHHHH-HHTTSCCCCTTSEEEEECC-S--HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T--T-EEEE
T ss_pred             CCHHHHHHH-HHHHcCCCccCCEEEEECc-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C--C-eeEe
Confidence            555555444 1232  2335679999998 5  789999999999996 8888  999999999988654 1  1 2122


Q ss_pred             cccc---CcceEEE----EcCc--CChhhhhcCCCCceeeccc
Q 009674          410 SYAA---HKTKIWL----VGDD--LTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       410 ~~~~---~~~~vwi----vg~~--~~~~~q~~a~~G~~f~~~~  443 (529)
                      ++++   ++++++|    +|-.  ..+-+....++|++++|.+
T Consensus       173 ~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          173 RYEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             CSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESS
T ss_pred             eHHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEee
Confidence            3332   4567777    2210  0011122346777777776

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.55  E-value=0.0033  Score=60.07  Aligned_cols=46  Identities=20%  Similarity=0.235  Sum_probs=40.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         8 ~~k~vlITGas~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   55 (253)
T 3qiv_A            8 ENKVGIVTGSGG--GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA   55 (253)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh
Confidence            457899999998  9999999999999999998  999999988887543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.54  E-value=0.0031  Score=61.05  Aligned_cols=46  Identities=17%  Similarity=0.197  Sum_probs=40.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         6 ~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (252)
T 3h7a_A            6 RNATVAVIGAGD--YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA   53 (252)
T ss_dssp             CSCEEEEECCSS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            346799999998  9999999999999999999  999999998888644

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.53  E-value=0.0027  Score=61.35  Aligned_cols=47  Identities=11%  Similarity=0.096  Sum_probs=40.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++| +-||+++|+.|+++|.+|.+  |+.++++++++++..
T Consensus        21 ~~k~vlITGasg-~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   69 (266)
T 3o38_A           21 KGKVVLVTAAAG-TGIGSTTARRALLEGADVVISDYHERRLGETRDQLAD   69 (266)
T ss_dssp             TTCEEEESSCSS-SSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCC-CchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh
Confidence            356899999987 35999999999999999998  899999988887633

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.52  E-value=0.0034  Score=59.52  Aligned_cols=42  Identities=17%  Similarity=0.218  Sum_probs=38.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus         3 k~vlItGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   46 (250)
T 2cfc_A            3 RVAIVTGASS--GNGLAIATRFLARGDRVAALDLSAETLEETARTH   46 (250)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  8888888887765

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.51  E-value=0.0027  Score=60.01  Aligned_cols=44  Identities=7%  Similarity=0.083  Sum_probs=39.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus         2 k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   47 (230)
T 3guy_A            2 SLIVITGASS--GLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSN   47 (230)
T ss_dssp             -CEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSS
T ss_pred             CEEEEecCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            4689999998  9999999999999999999  999999999988743

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.51  E-value=0.0043  Score=66.52  Aligned_cols=169  Identities=16%  Similarity=0.087  Sum_probs=107.7

Q ss_pred             eeeecCChhHHHHHHhc--CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeec
Q 009674          332 IKVVDGSSLAAAVVVNS--LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST  409 (529)
Q Consensus       332 irvv~Gnsltaavv~~~--i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~  409 (529)
                      -+.=+|.|+..++ .+.  +.-.-++|.|+|.-   .||+++|+.|...|.+|+..+.++...++.. ..+     +.+.
T Consensus       225 n~yG~~eslvdgI-~Ratg~~L~GKTVgVIG~G---~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G-----~~vv  294 (464)
T 3n58_A          225 NKYGCKESLVDGI-RRGTDVMMAGKVAVVCGYG---DVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDG-----FEVV  294 (464)
T ss_dssp             HHHHHHHHHHHHH-HHHHCCCCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTT-----CEEC
T ss_pred             hhhcchHHHHHHH-HHhcCCcccCCEEEEECcC---HHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcC-----ceec
Confidence            3444556655444 333  34467899999964   9999999999999999999333333333222 111     1133


Q ss_pred             cccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc----CCCCCcee--ecCCc--cccCC---------
Q 009674          410 SYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFY--HSTPA--MIIPP---------  466 (529)
Q Consensus       410 ~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y--~~~~a--~~~P~---------  466 (529)
                      ++++  +.+|+++  .|  ..|+.+....|++|+++|-+++++.+    .+++ +.-  ++.-.  ..+|+         
T Consensus       295 ~LeElL~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~-~~~~~ik~~v~~~~~~~g~~i~lLae  373 (464)
T 3n58_A          295 TLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN-LKWTNVKPQVDLIEFPDGKRLILLSE  373 (464)
T ss_dssp             CHHHHGGGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT-SEEEEEETTEEEEECTTSCEEEEEGG
T ss_pred             cHHHHHhhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh-CccccccCCeeEEEeCCCCEEEEEeC
Confidence            4553  5666655  33  46789999999999999999986652    3432 210  01000  12333         


Q ss_pred             -CCccccccccccCcchhHHHHHhhHhhhhcCCCCCc-cch-h---hhhHHH
Q 009674          467 -SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNE-CGQ-T---MCDIHQ  512 (529)
Q Consensus       467 -~~~~~~~~e~~~p~r~~~Ac~a~~~v~alEgw~~~e-~G~-i---v~~id~  512 (529)
                       .+-|+. |-.+.|..+|+..++--.+-..|=|...+ ... +   .+++|+
T Consensus       374 GrlvNL~-~a~GhP~~vm~~sf~~Q~la~~~l~~~~~~~~~~v~~lP~~lDe  424 (464)
T 3n58_A          374 GRLLNLG-NATGHPSFVMSASFTNQVLGQIELFTRTDAYKNEVYVLPKHLDE  424 (464)
T ss_dssp             GSBHHHH-HSCCSCHHHHHHHHHHHHHHHHHHHHSGGGCCSSEECCCHHHHH
T ss_pred             Cceeccc-CCCCChHHHHhHHHHHHHHHHHHHHhCccccCCCeeECCHHHHH
Confidence             366676 99999999999999998888888777653 332 2   366665

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.48  E-value=0.0037  Score=59.86  Aligned_cols=43  Identities=16%  Similarity=0.295  Sum_probs=39.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+++++++++++++
T Consensus         4 k~vlVTGas~--GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   48 (235)
T 3l6e_A            4 GHIIVTGAGS--GLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG   48 (235)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence            5799999998  9999999999999999998  99999999888874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.47  E-value=0.0039  Score=61.29  Aligned_cols=50  Identities=20%  Similarity=0.235  Sum_probs=42.8

Q ss_pred             cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          348 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       348 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ...-..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus        27 ~~~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   78 (276)
T 3r1i_A           27 LFDLSGKRALITGAST--GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG   78 (276)
T ss_dssp             GGCCTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            3344567899999998  9999999999999999998  999999998888643

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.46  E-value=0.0038  Score=60.86  Aligned_cols=46  Identities=15%  Similarity=0.196  Sum_probs=41.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.++++++++.
T Consensus        29 ~~k~vlVTGas~--GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   76 (281)
T 3ppi_A           29 EGASAIVSGGAG--GLGEATVRRLHADGLGVVIADLAAEKGKALADELGN   76 (281)
T ss_dssp             TTEEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC
Confidence            456899999998  9999999999999999999  999999999888743

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.45  E-value=0.0038  Score=59.50  Aligned_cols=46  Identities=22%  Similarity=0.296  Sum_probs=41.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        13 ~~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   60 (249)
T 3f9i_A           13 TGKTSLITGASS--GIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD   60 (249)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc
Confidence            577899999998  9999999999999999999  999999999887654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.44  E-value=0.0038  Score=60.37  Aligned_cols=45  Identities=22%  Similarity=0.372  Sum_probs=40.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         6 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   52 (257)
T 3imf_A            6 EKVVIITGGSS--GMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ   52 (257)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999998  999999998887643

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.41  E-value=0.0036  Score=60.48  Aligned_cols=46  Identities=20%  Similarity=0.300  Sum_probs=40.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         6 ~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (250)
T 3nyw_A            6 QKGLAIITGASQ--GIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMR   53 (250)
T ss_dssp             CCCEEEEESTTS--HHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  999999988887543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.39  E-value=0.0048  Score=59.77  Aligned_cols=45  Identities=11%  Similarity=0.158  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++++++++++
T Consensus         7 ~gk~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   53 (255)
T 4eso_A            7 QGKKAIVIGGTH--GMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG   53 (255)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            346799999998  9999999999999999999  99999999988864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.37  E-value=0.0039  Score=60.69  Aligned_cols=48  Identities=19%  Similarity=0.206  Sum_probs=40.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.+.++|+||.|++=||+|+|+.|+++|.+|.+  |+++.++++++++.+
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~   54 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQ   54 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGG
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            356789999986335999999999999999999  888888888777544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.36  E-value=0.0041  Score=60.18  Aligned_cols=44  Identities=16%  Similarity=0.238  Sum_probs=39.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++++++.
T Consensus        29 ~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   74 (262)
T 3rkr_A           29 GQVAVVTGASR--GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV   74 (262)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  99999998887754

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.36  E-value=0.0069  Score=59.87  Aligned_cols=86  Identities=19%  Similarity=0.160  Sum_probs=57.2

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cccc--CcceEEEEc-
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWLVG-  422 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwivg-  422 (529)
                      ++...++|.++|+ |  .+|+++|+.|.+.|.+|++  |+.++.+++.++.+.       .+. ++++  ++++++|.- 
T Consensus       125 ~~~~~~~v~iiGa-G--~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~-------~~~~~~~~~~~~aDiVi~at  194 (275)
T 2hk9_A          125 PEVKEKSILVLGA-G--GASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL-------EVVNSPEEVIDKVQVIVNTT  194 (275)
T ss_dssp             TTGGGSEEEEECC-S--HHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCE-------EECSCGGGTGGGCSEEEECS
T ss_pred             CCcCCCEEEEECc-h--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCC-------eeehhHHhhhcCCCEEEEeC
Confidence            3334578999997 6  8999999999999998888  888888888776532       122 5543  567776631 


Q ss_pred             -CcCCh-----hhhhcCCCCceeecccc
Q 009674          423 -DDLTG-----KEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       423 -~~~~~-----~~q~~a~~G~~f~~~~~  444 (529)
                       ....+     -+...+++|++++|++-
T Consensus       195 p~~~~~~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          195 SVGLKDEDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             STTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence             11111     01224567777777663

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.36  E-value=0.0049  Score=59.17  Aligned_cols=46  Identities=20%  Similarity=0.177  Sum_probs=41.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus         8 ~~k~vlITGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   55 (261)
T 3n74_A            8 EGKVALITGAGS--GFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD   55 (261)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC
Confidence            456899999998  9999999999999999999  999999999887643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.35  E-value=0.0049  Score=58.53  Aligned_cols=45  Identities=16%  Similarity=0.244  Sum_probs=39.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        10 ~~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   56 (255)
T 1fmc_A           10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEIQ   56 (255)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888887777653

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.35  E-value=0.0032  Score=61.29  Aligned_cols=46  Identities=9%  Similarity=0.207  Sum_probs=40.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        19 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   66 (266)
T 4egf_A           19 DGKRALITGATK--GIGADIARAFAAAGARLVLSGRDVSELDAARRALGE   66 (266)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            356899999998  9999999999999999999  899999988877644

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.34  E-value=0.0039  Score=61.38  Aligned_cols=43  Identities=28%  Similarity=0.285  Sum_probs=36.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.+++.+
T Consensus        11 ~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~   55 (342)
T 1y1p_A           11 GSLVLVTGANG--FVASHVVEQLLEHGYKVRGTARSASKLANLQKRW   55 (342)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHh
Confidence            45799999999  9999999999999999987  8877777665543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.34  E-value=0.0045  Score=60.08  Aligned_cols=46  Identities=13%  Similarity=0.203  Sum_probs=40.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   57 (264)
T 3ucx_A           10 TDKVVVISGVGP--ALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD   57 (264)
T ss_dssp             TTCEEEEESCCT--THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999999  999999988887543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.33  E-value=0.0043  Score=58.66  Aligned_cols=44  Identities=18%  Similarity=0.256  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |++++.+++++++.
T Consensus         7 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (248)
T 2pnf_A            7 GKVSLVTGSTR--GIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIA   52 (248)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.32  E-value=0.0062  Score=57.89  Aligned_cols=44  Identities=7%  Similarity=0.138  Sum_probs=39.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++
T Consensus        10 ~~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   55 (254)
T 2wsb_A           10 DGACAAVTGAGS--GIGLEICRAFAASGARLILIDREAAALDRAAQEL   55 (254)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  8888888887776

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.32  E-value=0.0042  Score=60.93  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=40.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 ~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   50 (264)
T 3tfo_A            4 DKVILITGASG--GIGEGIARELGVAGAKILLGARRQARIEAIATEIRD   50 (264)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            36799999998  9999999999999999999  999999998887643

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.31  E-value=0.0055  Score=59.16  Aligned_cols=45  Identities=20%  Similarity=0.236  Sum_probs=40.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus         8 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (259)
T 4e6p_A            8 GKSALITGSAR--GIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP   54 (259)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            46799999998  9999999999999999998  899999988887643

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.30  E-value=0.0047  Score=59.37  Aligned_cols=44  Identities=20%  Similarity=0.244  Sum_probs=39.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         7 ~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   52 (247)
T 2jah_A            7 GKVALITGASS--GIGEATARALAAEGAAVAIAARRVEKLRALGDELT   52 (247)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  88899888877753

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.30  E-value=0.0051  Score=64.66  Aligned_cols=127  Identities=15%  Similarity=0.244  Sum_probs=86.0

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc----hhh----HHHHHhhCcccccc
Q 009674          340 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC----KDD----YEKLKLRIPVEAQH  403 (529)
Q Consensus       340 ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~----~~~----~~~l~~~~~~~~~~  403 (529)
                      .+.|.+++..+     -...+|++.||-   ..|.++|+.|...|. ++++  |+    ++|    +..+|+++..+...
T Consensus       174 V~lAal~~A~~i~g~~l~~~kVVv~GAG---aAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~  250 (388)
T 1vl6_A          174 VVSAAFLNALKLTEKKIEEVKVVVNGIG---AAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP  250 (388)
T ss_dssp             HHHHHHHHHHHHHTCCTTTCEEEEECCS---HHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHhCCCCCCcEEEEECCC---HHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc
Confidence            34455555443     257799999998   999999999999998 7888  55    555    66677775554322


Q ss_pred             ceeeeccccc--CcceEEE---EcCcCChhhhhcCCCCceeecccc----cCcc---CCCCCceeecCCccccCCCCccc
Q 009674          404 NLVLSTSYAA--HKTKIWL---VGDDLTGKEQARAPKGTIFIPYTQ----IPPR---KLRKDCFYHSTPAMIIPPSLSNM  471 (529)
Q Consensus       404 ~l~~~~~~~~--~~~~vwi---vg~~~~~~~q~~a~~G~~f~~~~~----~~~~---~~R~dc~y~~~~a~~~P~~~~~~  471 (529)
                      . ....++++  +.++|.|   ....+++|..++|.++.++.+.|.    ..|+   +. ..|++.++ -...|+..+|.
T Consensus       251 ~-~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~~-g~~i~atG-r~~~p~Q~NN~  327 (388)
T 1vl6_A          251 E-RLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPVPEIDPELAREA-GAFIVATG-RSDHPNQVNNL  327 (388)
T ss_dssp             T-CCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHHT-TCSEEEES-CTTSSSBCCGG
T ss_pred             c-CchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHHh-cCeEEEeC-CCCCCCcCCce
Confidence            1 12236664  7778877   568899999999999999999885    2233   22 22666555 33456666665


Q ss_pred             c
Q 009674          472 H  472 (529)
Q Consensus       472 ~  472 (529)
                      .
T Consensus       328 ~  328 (388)
T 1vl6_A          328 L  328 (388)
T ss_dssp             G
T ss_pred             e
Confidence            4

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.30  E-value=0.0067  Score=59.10  Aligned_cols=44  Identities=9%  Similarity=0.145  Sum_probs=39.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~vlITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (263)
T 2a4k_A            6 GKTILVTGAAS--GIGRAALDLFAREGASLVAVDREERLLAEAVAALE   51 (263)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            46799999998  9999999999999999998  89999998888775

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.28  E-value=0.0046  Score=60.30  Aligned_cols=44  Identities=14%  Similarity=0.199  Sum_probs=39.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++
T Consensus        20 ~~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l   65 (267)
T 1vl8_A           20 RGRVALVTGGSR--GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL   65 (267)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  8888888877665

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.27  E-value=0.005  Score=61.29  Aligned_cols=46  Identities=15%  Similarity=0.299  Sum_probs=41.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        40 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   87 (293)
T 3rih_A           40 SARSVLVTGGTK--GIGRGIATVFARAGANVAVAARSPRELSSVTAELGE   87 (293)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999999  999999988888654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.27  E-value=0.0054  Score=60.63  Aligned_cols=48  Identities=19%  Similarity=0.180  Sum_probs=40.5

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +....++|+++|+ |  -+|+++|..|++.|.+|++  |+.++.++|++++..
T Consensus       115 ~~~~~~~vlvlGa-G--g~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~  164 (272)
T 1p77_A          115 WLRPNQHVLILGA-G--GATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP  164 (272)
T ss_dssp             CCCTTCEEEEECC-S--HHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCcCCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc
Confidence            3334678999998 6  7999999999999999988  899999999887543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.26  E-value=0.005  Score=58.65  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=39.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         5 ~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~   50 (247)
T 3lyl_A            5 EKVALVTGASR--GIGFEVAHALASKGATVVGTATSQASAEKFENSMK   50 (247)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  89888888877753

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=96.26  E-value=0.029  Score=56.51  Aligned_cols=140  Identities=14%  Similarity=0.128  Sum_probs=87.0

Q ss_pred             cCCcEEEeccccccc-ccccCCceeeecCCC-CcceeeecCChhHHH-------HHHhc-CcCCCcEEEEecccCchhhH
Q 009674          299 KGVKVISLGLLNQGE-ELNRNGEIYLERQPN-KLKIKVVDGSSLAAA-------VVVNS-LPKTTAHVLLRGTVTANKVA  368 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e-~ln~~g~~~~~k~p~-~L~irvv~Gnsltaa-------vv~~~-i~~~~~~V~~~Gatg~~kig  368 (529)
                      .|+|+++.=-=|... .+-.-.+..+.-+++ +.-..+.||+.+|+.       +..+. .+++..+|.++|+ |  .+|
T Consensus        71 ~g~K~~~~~p~N~~~~glp~~~~~~~l~d~~tG~p~a~~d~~~lt~~rT~a~~~la~~~la~~~~~~igiIG~-G--~~g  147 (312)
T 2i99_A           71 LTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGA-G--VQA  147 (312)
T ss_dssp             EEEEEEEEECCCSSSSCSSSEEEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-S--HHH
T ss_pred             EEEEEEEecCCCccccCCCceEEEEEEEECCCCCEEEEEcchhHHHHHHHHHHHHHHHHhCCCCCcEEEEECC-c--HHH
Confidence            577776642112111 111112244444443 355889999998752       22222 2456779999997 5  999


Q ss_pred             HHHHHHHhcc-Cc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-----cCcCChhhhhcCCCCc
Q 009674          369 NAVASSLCQM-GI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----GDDLTGKEQARAPKGT  437 (529)
Q Consensus       369 ~ava~~L~~~-~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----g~~~~~~~q~~a~~G~  437 (529)
                      +++++.|++. |+ +|.+  |++++.+++.+++..    +.....++++  +++++++.     ...++.   .++++|+
T Consensus       148 ~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~----~~~~~~~~~e~v~~aDiVi~atp~~~~v~~~---~~l~~g~  220 (312)
T 2i99_A          148 YSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG----EVRVCSSVQEAVAGADVIITVTLATEPILFG---EWVKPGA  220 (312)
T ss_dssp             HHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSS----CCEECSSHHHHHTTCSEEEECCCCSSCCBCG---GGSCTTC
T ss_pred             HHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhC----CeEEeCCHHHHHhcCCEEEEEeCCCCcccCH---HHcCCCc
Confidence            9999999864 76 7777  899999999887653    1111336654  67777552     222332   3678999


Q ss_pred             eeecccccCcc
Q 009674          438 IFIPYTQIPPR  448 (529)
Q Consensus       438 ~f~~~~~~~~~  448 (529)
                      ++++++-..|.
T Consensus       221 ~vi~~g~~~p~  231 (312)
T 2i99_A          221 HINAVGASRPD  231 (312)
T ss_dssp             EEEECCCCSTT
T ss_pred             EEEeCCCCCCC
Confidence            99998766555

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.26  E-value=0.0061  Score=60.09  Aligned_cols=46  Identities=20%  Similarity=0.270  Sum_probs=40.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        27 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   74 (283)
T 3v8b_A           27 PSPVALITGAGS--GIGRATALALAADGVTVGALGRTRTEVEEVADEIVG   74 (283)
T ss_dssp             CCCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  999999999888644

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.24  E-value=0.0047  Score=59.59  Aligned_cols=44  Identities=11%  Similarity=0.196  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   52 (263)
T 3ai3_A            7 GKVAVITGSSS--GIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK   52 (263)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  88888888877754

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.24  E-value=0.0051  Score=60.43  Aligned_cols=45  Identities=24%  Similarity=0.226  Sum_probs=40.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++++
T Consensus        27 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   73 (272)
T 4dyv_A           27 GKKIAIVTGAGS--GVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG   73 (272)
T ss_dssp             -CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC
Confidence            456789999998  9999999999999999998  99999999888865

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=96.24  E-value=0.0062  Score=60.88  Aligned_cols=48  Identities=19%  Similarity=0.169  Sum_probs=42.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~  401 (529)
                      +-+.++|+|+++  =||+|+|+.|+++|.+|.+  |++|+++++.++++.+.
T Consensus        28 ~gKvalVTGas~--GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~   77 (273)
T 4fgs_A           28 NAKIAVITGATS--GIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGA   77 (273)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTC
T ss_pred             CCCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCe
Confidence            456789999997  8999999999999999999  99999999988876543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.23  E-value=0.0079  Score=58.31  Aligned_cols=45  Identities=13%  Similarity=0.197  Sum_probs=39.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (260)
T 1nff_A            7 GKVALVSGGAR--GMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD   53 (260)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc
Confidence            46799999998  9999999999999999998  888888888777643

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.23  E-value=0.0058  Score=58.29  Aligned_cols=44  Identities=14%  Similarity=0.197  Sum_probs=38.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        12 ~~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l   57 (260)
T 3awd_A           12 DNRVAIVTGGAQ--NIGLACVTALAEAGARVIIADLDEAMATKAVEDL   57 (260)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  8888887776664

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.22  E-value=0.0052  Score=61.64  Aligned_cols=126  Identities=17%  Similarity=0.086  Sum_probs=74.0

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccc-cceeeec-
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQ-HNLVLST-  409 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~-~~l~~~~-  409 (529)
                      |||-....+.--....-..++|+|+|+ |  -+|++++.+|++.|. +|++  |+.++.++|.+++..... ....... 
T Consensus       109 TD~~G~~~~l~~~~~~l~~k~vlVlGa-G--G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~  185 (283)
T 3jyo_A          109 TDVSGFGRGMEEGLPNAKLDSVVQVGA-G--GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA  185 (283)
T ss_dssp             HHHHHHHHHHHHHCTTCCCSEEEEECC-S--HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS
T ss_pred             CCHHHHHHHHHHhCcCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH
Confidence            555555554432233345679999999 5  799999999999998 6888  999999999888654321 1111111 


Q ss_pred             -cccc--CcceEEEEcCcC--C-----hhhhhcCCCCceeecccccCcc------CCC-CCceeecCCcccc
Q 009674          410 -SYAA--HKTKIWLVGDDL--T-----GKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       410 -~~~~--~~~~vwivg~~~--~-----~~~q~~a~~G~~f~~~~~~~~~------~~R-~dc~y~~~~a~~~  464 (529)
                       ++++  ++++++|--..+  .     +-+....+++++++|.. -.|.      +.| +-|.+..+..|-+
T Consensus       186 ~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv-Y~P~~T~ll~~A~~~G~~~~~Gl~MLv  256 (283)
T 3jyo_A          186 RGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVV-YMPIETELLKAARALGCETLDGTRMAI  256 (283)
T ss_dssp             TTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECC-CSSSSCHHHHHHHHHTCCEECTHHHHH
T ss_pred             HHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEec-CCCCCCHHHHHHHHCcCeEeCcHHHHH
Confidence             3332  567887721111  1     11223346677777766 3332      112 3455555555543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.22  E-value=0.0071  Score=59.44  Aligned_cols=48  Identities=15%  Similarity=0.192  Sum_probs=41.7

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..-..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus        23 ~~l~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   72 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGS--GIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG   72 (277)
T ss_dssp             CTTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            333567899999998  9999999999999999999  89999998888753

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.22  E-value=0.0083  Score=57.85  Aligned_cols=44  Identities=11%  Similarity=0.193  Sum_probs=39.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.++++
T Consensus         5 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (254)
T 1hdc_A            5 GKTVIITGGAR--GLGAEAARQAVAAGARVVLADVLDEEGAATARELG   50 (254)
T ss_dssp             CSEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            35799999998  9999999999999999988  88999998888773

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.21  E-value=0.0051  Score=59.73  Aligned_cols=46  Identities=15%  Similarity=0.257  Sum_probs=40.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus         9 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   56 (262)
T 3pk0_A            9 QGRSVVVTGGTK--GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ   56 (262)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999998  999999888777543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.21  E-value=0.0078  Score=59.09  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=39.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++.+
T Consensus         5 gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   50 (281)
T 3zv4_A            5 GEVALITGGAS--GLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG   50 (281)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC
Confidence            46799999998  9999999999999999999  99999999888764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.21  E-value=0.0079  Score=59.08  Aligned_cols=46  Identities=15%  Similarity=0.140  Sum_probs=41.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.++++.
T Consensus        15 ~gk~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~   62 (291)
T 3rd5_A           15 AQRTVVITGANS--GLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG   62 (291)
T ss_dssp             TTCEEEEECCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSS
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC
Confidence            456899999998  9999999999999999999  999999999888743

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.20  E-value=0.01  Score=61.79  Aligned_cols=144  Identities=19%  Similarity=0.230  Sum_probs=83.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc---CcceEEE---EcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL---VGD  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwi---vg~  423 (529)
                      ..++|.+.|. |  .||+.+|+.|.+.|.+|++  ++.+++++++++...+.      + +.++   .++||.+   .+.
T Consensus       172 ~GktV~V~G~-G--~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~------v-~~~~ll~~~~DIvip~a~~~  241 (364)
T 1leh_A          172 EGLAVSVQGL-G--NVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA------V-APNAIYGVTCDIFAPCALGA  241 (364)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE------C-CGGGTTTCCCSEEEECSCSC
T ss_pred             CcCEEEEECc-h--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE------E-ChHHHhccCCcEeeccchHH
Confidence            4578999998 5  9999999999999999999  77888888877643211      1 2222   4677766   355


Q ss_pred             cCChhhhhcCCCCceeecccccCccCC-CCCceeecCCccccCCCCccccccccccCcchhHHHHHhhHhh-hhc--CCC
Q 009674          424 DLTGKEQARAPKGTIFIPYTQIPPRKL-RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-ALE--GWD  499 (529)
Q Consensus       424 ~~~~~~q~~a~~G~~f~~~~~~~~~~~-R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~-alE--gw~  499 (529)
                      .|+.++...+ +..+++--+. .|... .-+=...+.+..-+|+                 .++-|+|++- ++|  +|+
T Consensus       242 ~I~~~~~~~l-g~~iV~e~An-~p~t~~ea~~~L~~~Gi~~~Pd-----------------~~~NaGGv~~s~~E~~~~~  302 (364)
T 1leh_A          242 VLNDFTIPQL-KAKVIAGSAD-NQLKDPRHGKYLHELGIVYAPD-----------------YVINAGGVINVADELYGYN  302 (364)
T ss_dssp             CBSTTHHHHC-CCSEECCSCS-CCBSSHHHHHHHHHHTCEECCH-----------------HHHTTHHHHHHHHGGGCCC
T ss_pred             HhCHHHHHhC-CCcEEEeCCC-CCcccHHHHHHHHhCCCEEecc-----------------eeecCCceEEEEEeecCCC
Confidence            6666555444 1122222221 11000 0000011111122222                 1234455443 555  888


Q ss_pred             CCccch-h---hhhHHHHHHHHHhcCCcc
Q 009674          500 LNECGQ-T---MCDIHQVWHASLRHGFRP  524 (529)
Q Consensus       500 ~~e~G~-i---v~~id~i~~aa~kHGF~p  524 (529)
                      +.|+-+ +   ++..++||+.|.++|-.+
T Consensus       303 ~e~v~~~l~~i~~~~~~i~~~~~~~~~~~  331 (364)
T 1leh_A          303 RTRAMKRVDGIYDSIEKIFAISKRDGVPS  331 (364)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            877665 3   466679999999988543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.19  E-value=0.0054  Score=60.09  Aligned_cols=44  Identities=14%  Similarity=0.163  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        26 ~k~vlITGasg--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~   71 (302)
T 1w6u_A           26 GKVAFITGGGT--GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS   71 (302)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888777654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.18  E-value=0.0057  Score=58.91  Aligned_cols=44  Identities=16%  Similarity=0.234  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus        14 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   59 (260)
T 2zat_A           14 NKVALVTASTD--GIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ   59 (260)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888887776653

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.17  E-value=0.0031  Score=63.07  Aligned_cols=101  Identities=13%  Similarity=0.102  Sum_probs=67.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CcceEEE----EcC-
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWL----VGD-  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwi----vg~-  423 (529)
                      +.++|+++|+ |  -.|+|++..|.+.|.+|++  |+.++.++|. +++.       ...++++ .+++++|    +|. 
T Consensus       117 ~~k~vlvlGa-G--Gaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~-------~~~~~~~l~~~DiVInaTp~Gm~  185 (269)
T 3phh_A          117 NYQNALILGA-G--GSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGC-------DCFMEPPKSAFDLIINATSASLH  185 (269)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTC-------EEESSCCSSCCSEEEECCTTCCC
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCC-------eEecHHHhccCCEEEEcccCCCC
Confidence            3789999998 5  7999999999999988888  9999999988 6431       1223333 4567777    331 


Q ss_pred             ---cCChhhhh-cCCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674          424 ---DLTGKEQA-RAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       424 ---~~~~~~q~-~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  464 (529)
                         .++++... .+++|++++|.+--| .     +.| +-|.+..+..|-+
T Consensus       186 ~~~~l~~~~l~~~l~~~~~v~D~vY~P-~T~ll~~A~~~G~~~~~Gl~MLv  235 (269)
T 3phh_A          186 NELPLNKEVLKGYFKEGKLAYDLAYGF-LTPFLSLAKELKTPFQDGKDMLI  235 (269)
T ss_dssp             CSCSSCHHHHHHHHHHCSEEEESCCSS-CCHHHHHHHHTTCCEECSHHHHH
T ss_pred             CCCCCChHHHHhhCCCCCEEEEeCCCC-chHHHHHHHHCcCEEECCHHHHH
Confidence               34333111 347888899988555 3     122 5666666666654

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.17  E-value=0.0063  Score=59.47  Aligned_cols=46  Identities=17%  Similarity=0.267  Sum_probs=40.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++++.
T Consensus        26 ~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   73 (266)
T 3grp_A           26 TGRKALVTGATG--GIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGK   73 (266)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            457899999998  9999999999999999999  889999988777543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.17  E-value=0.0075  Score=58.94  Aligned_cols=45  Identities=18%  Similarity=0.202  Sum_probs=39.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus        10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   56 (281)
T 3svt_A           10 QDRTYLVTGGGS--GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELE   56 (281)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  88888888877754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.16  E-value=0.0058  Score=57.04  Aligned_cols=39  Identities=8%  Similarity=0.090  Sum_probs=34.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHh-ccCcEEEe--cchh-hHHHHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKD-DYEKLK  394 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l--~~~~-~~~~l~  394 (529)
                      +.|+|+||+|  .||+++|+.|. ++|.+|.+  |+++ ++++++
T Consensus         6 k~vlVtGasg--~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~   48 (221)
T 3r6d_A            6 XYITILGAAG--QIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI   48 (221)
T ss_dssp             SEEEEESTTS--HHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH
T ss_pred             EEEEEEeCCc--HHHHHHHHHHHhcCCceEEEEecCccccchhhc
Confidence            4699999999  99999999999 89999988  8888 777765

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.16  E-value=0.0052  Score=59.86  Aligned_cols=46  Identities=11%  Similarity=0.071  Sum_probs=39.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus        11 ~~k~vlITGas~--GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~   58 (311)
T 3o26_A           11 KRRCAVVTGGNK--GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN   58 (311)
T ss_dssp             -CCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999999  999888887777544

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.16  E-value=0.0065  Score=60.37  Aligned_cols=46  Identities=11%  Similarity=0.166  Sum_probs=40.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        30 ~gk~vlVTGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   77 (301)
T 3tjr_A           30 DGRAAVVTGGAS--GIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG   77 (301)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999998  999999988877543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.15  E-value=0.0061  Score=59.65  Aligned_cols=46  Identities=7%  Similarity=0.038  Sum_probs=40.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus        26 ~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   73 (277)
T 4fc7_A           26 RDKVAFITGGGS--GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG   73 (277)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  888888888777643

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.14  E-value=0.0062  Score=58.73  Aligned_cols=43  Identities=14%  Similarity=0.220  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus         9 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   53 (260)
T 2ae2_A            9 GCTALVTGGSR--GIGYGIVEELASLGASVYTCSRNQKELNDCLTQW   53 (260)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  8888888777665

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.14  E-value=0.0058  Score=58.91  Aligned_cols=43  Identities=21%  Similarity=0.300  Sum_probs=38.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus         1 k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   45 (248)
T 3asu_A            1 MIVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG   45 (248)
T ss_dssp             CEEEETTTTS--TTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            3689999998  9999999999999999998  88999998887764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.14  E-value=0.0048  Score=60.87  Aligned_cols=45  Identities=18%  Similarity=0.193  Sum_probs=40.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         8 gk~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   54 (280)
T 3tox_A            8 GKIAIVTGASS--GIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG   54 (280)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999999  999999999888643

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.14  E-value=0.0053  Score=58.23  Aligned_cols=44  Identities=18%  Similarity=0.223  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+ +++.+++++++.
T Consensus         7 ~k~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (258)
T 3afn_B            7 GKRVLITGSSQ--GIGLATARLFARAGAKVGLHGRKAPANIDETIASMR   53 (258)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHH
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHH
Confidence            46799999998  9999999999999999988  77 788887776653

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.13  E-value=0.0076  Score=60.92  Aligned_cols=44  Identities=7%  Similarity=0.149  Sum_probs=38.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-Cc-EEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQM-GI-KVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~-~~-~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|+||  .||+++|+.|.++ |. +|.+  |++++.+.+++++.
T Consensus        21 ~k~vlVTGatG--~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~   68 (344)
T 2gn4_A           21 NQTILITGGTG--SFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN   68 (344)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc
Confidence            46899999999  9999999999998 97 8877  88888888877654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.13  E-value=0.0072  Score=58.66  Aligned_cols=43  Identities=19%  Similarity=0.295  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   50 (278)
T 1spx_A            6 EKVAIITGSSN--GIGRATAVLFAREGAKVTITGRHAERLEETRQQI   50 (278)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  8889998887765

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.13  E-value=0.0066  Score=60.01  Aligned_cols=45  Identities=13%  Similarity=0.217  Sum_probs=40.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.++|+|+++  =||+|+|+.|+++|.+|.+  |++++++++.+++..
T Consensus         7 gKvalVTGas~--GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~   53 (254)
T 4fn4_A            7 NKVVIVTGAGS--GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG   53 (254)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh
Confidence            46789999997  9999999999999999999  999999999988644

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.11  E-value=0.0099  Score=57.31  Aligned_cols=45  Identities=16%  Similarity=0.175  Sum_probs=39.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |++++.+++.+++..
T Consensus        12 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (263)
T 3ak4_A           12 GRKAIVTGGSK--GIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN   58 (263)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc
Confidence            46799999998  9999999999999999998  888888888877643

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.11  E-value=0.0054  Score=58.56  Aligned_cols=44  Identities=14%  Similarity=0.240  Sum_probs=35.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.++..+++
T Consensus        13 ~~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l   58 (265)
T 1h5q_A           13 VNKTIIVTGGNR--GIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV   58 (265)
T ss_dssp             TTEEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHH
Confidence            356899999998  9999999999999999988  7666555444443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.11  E-value=0.0097  Score=56.86  Aligned_cols=44  Identities=20%  Similarity=0.241  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         7 ~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (264)
T 2pd6_A            7 SALALVTGAGS--GIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLG   52 (264)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.11  E-value=0.0071  Score=57.85  Aligned_cols=43  Identities=14%  Similarity=0.148  Sum_probs=38.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++
T Consensus        12 ~k~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (265)
T 2o23_A           12 GLVAVITGGAS--GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL   56 (265)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh
Confidence            46899999998  9999999999999999988  8888888887775

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.11  E-value=0.0061  Score=58.98  Aligned_cols=45  Identities=18%  Similarity=0.336  Sum_probs=40.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        11 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (256)
T 3gaf_A           11 NDAVAIVTGAAA--GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR   57 (256)
T ss_dssp             TTCEEEECSCSS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  89999998887754

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.11  E-value=0.0061  Score=59.87  Aligned_cols=44  Identities=11%  Similarity=0.251  Sum_probs=39.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        22 k~vlVTGas~--gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~   67 (272)
T 2nwq_A           22 STLFITGATS--GFGEACARRFAEAGWSLVLTGRREERLQALAGELSA   67 (272)
T ss_dssp             CEEEESSTTT--SSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT
T ss_pred             cEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc
Confidence            6799999998  9999999999999999998  899999988877543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.10  E-value=0.0076  Score=59.02  Aligned_cols=43  Identities=14%  Similarity=0.150  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        44 ~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l   88 (285)
T 2c07_A           44 NKVALVTGAGR--GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI   88 (285)
T ss_dssp             SCEEEEESTTS--HHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  7888888777664

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.10  E-value=0.0072  Score=58.93  Aligned_cols=43  Identities=16%  Similarity=0.224  Sum_probs=38.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus        21 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   65 (273)
T 1ae1_A           21 GTTALVTGGSK--GIGYAIVEELAGLGARVYTCSRNEKELDECLEIW   65 (273)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  8888888877665

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.10  E-value=0.0079  Score=58.45  Aligned_cols=45  Identities=18%  Similarity=0.193  Sum_probs=40.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++.+.
T Consensus         5 ~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   51 (281)
T 3m1a_A            5 AKVWLVTGASS--GFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPD   51 (281)
T ss_dssp             CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTT
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccC
Confidence            46899999998  9999999999999999998  999999998887644

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.09  E-value=0.0068  Score=58.32  Aligned_cols=43  Identities=21%  Similarity=0.235  Sum_probs=38.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+|+|++|  -||+++|+.|.++|.+|.+  |++++.+++.+++.
T Consensus         3 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   47 (256)
T 1geg_A            3 KVALVTGAGQ--GIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN   47 (256)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            5789999998  9999999999999999988  88888888777653

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.08  E-value=0.008  Score=57.85  Aligned_cols=46  Identities=17%  Similarity=0.206  Sum_probs=40.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         8 ~gk~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   55 (248)
T 3op4_A            8 EGKVALVTGASR--GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD   55 (248)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc
Confidence            456899999998  9999999999999999998  899999988887644

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.07  E-value=0.007  Score=58.58  Aligned_cols=45  Identities=24%  Similarity=0.305  Sum_probs=39.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus        12 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   58 (267)
T 1iy8_A           12 TDRVVLITGGGS--GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVL   58 (267)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            346899999998  9999999999999999988  88888888777653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.07  E-value=0.0063  Score=59.53  Aligned_cols=44  Identities=20%  Similarity=0.318  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus        28 ~k~vlITGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   73 (286)
T 1xu9_A           28 GKKVIVTGASK--GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL   73 (286)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  89999988877643

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.06  E-value=0.0074  Score=58.86  Aligned_cols=46  Identities=11%  Similarity=0.190  Sum_probs=40.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus        10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   57 (271)
T 3tzq_B           10 ENKVAIITGACG--GIGLETSRVLARAGARVVLADLPETDLAGAAASVGR   57 (271)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCT
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC
Confidence            356899999998  9999999999999999998  899999988887643

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.06  E-value=0.005  Score=62.83  Aligned_cols=127  Identities=13%  Similarity=0.135  Sum_probs=75.6

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc---hhhHHHHHhhCccccccce--e
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC---KDDYEKLKLRIPVEAQHNL--V  406 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~---~~~~~~l~~~~~~~~~~~l--~  406 (529)
                      |||-....+.--..+....++|+|+|| |  -+|+|+|..|++.|+ +|++  |+   .++.++|.+++........  +
T Consensus       130 TD~~Gf~~~L~~~~~~l~gk~~lVlGA-G--Gaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~  206 (312)
T 3t4e_A          130 TDGTGHIRAIKESGFDMRGKTMVLLGA-G--GAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVT  206 (312)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred             CcHHHHHHHHHhcCCCcCCCEEEEECc-C--HHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEe
Confidence            666666655433345556789999998 5  789999999999998 7887  88   7788888877654332221  1


Q ss_pred             eeccc---cc--CcceEEE----EcCc-CC--hh--hhhcCCCCceeecccccCcc-----CCC-CCceeecCCcccc
Q 009674          407 LSTSY---AA--HKTKIWL----VGDD-LT--GK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       407 ~~~~~---~~--~~~~vwi----vg~~-~~--~~--~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  464 (529)
                      ...++   ++  ++++++|    +|-. .+  +-  +....+++.+++|+.=-|.+     +.| +-|.+..+..|-+
T Consensus       207 ~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv  284 (312)
T 3t4e_A          207 DLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLL  284 (312)
T ss_dssp             ETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCHHHHHHHHTTCEEECHHHHHH
T ss_pred             chHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeEECcHHHHH
Confidence            11132   22  4667877    3310 00  10  22235677777777633322     122 4566666666543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.06  E-value=0.0078  Score=59.04  Aligned_cols=45  Identities=18%  Similarity=0.163  Sum_probs=39.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus        24 ~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   70 (279)
T 3sju_A           24 PQTAFVTGVSS--GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA   70 (279)
T ss_dssp             -CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999998  899999888877543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.06  E-value=0.0055  Score=60.40  Aligned_cols=46  Identities=22%  Similarity=0.147  Sum_probs=39.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        32 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   79 (281)
T 4dry_A           32 EGRIALVTGGGT--GVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG   79 (281)
T ss_dssp             --CEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999999  999999988887644

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.05  E-value=0.0082  Score=58.39  Aligned_cols=45  Identities=20%  Similarity=0.236  Sum_probs=39.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        30 ~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~   76 (272)
T 1yb1_A           30 TGEIVLITGAGH--GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCK   76 (272)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888888777653

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.05  E-value=0.007  Score=58.25  Aligned_cols=43  Identities=26%  Similarity=0.237  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |++++.+++++++
T Consensus         6 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   50 (253)
T 1hxh_A            6 GKVALVTGGAS--GVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL   50 (253)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence            46799999998  9999999999999999988  8888888887776

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.04  E-value=0.0068  Score=58.30  Aligned_cols=44  Identities=20%  Similarity=0.272  Sum_probs=39.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++++
T Consensus         6 gk~vlVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (247)
T 3rwb_A            6 GKTALVTGAAQ--GIGKAIAARLAADGATVIVSDINAEGAKAAAASIG   51 (247)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            46799999998  9999999999999999998  89999998888763

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.04  E-value=0.008  Score=58.81  Aligned_cols=43  Identities=14%  Similarity=0.242  Sum_probs=38.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        22 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l   66 (277)
T 2rhc_B           22 SEVALVTGATS--GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL   66 (277)
T ss_dssp             SCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  8888888877765

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.02  E-value=0.0086  Score=57.92  Aligned_cols=44  Identities=20%  Similarity=0.276  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (262)
T 1zem_A            7 GKVCLVTGAGG--NIGLATALRLAEEGTAIALLDMNREALEKAEASVR   52 (262)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  88888888877753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.99  E-value=0.0083  Score=58.18  Aligned_cols=44  Identities=20%  Similarity=0.213  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |++++.+++.+++.
T Consensus         4 ~k~vlVTGas~--gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~   50 (258)
T 3oid_A            4 NKCALVTGSSR--GVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE   50 (258)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEecCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999887   78888888877754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.99  E-value=0.0074  Score=57.98  Aligned_cols=44  Identities=14%  Similarity=0.233  Sum_probs=38.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        13 ~~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   58 (266)
T 1xq1_A           13 KAKTVLVTGGTK--GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW   58 (266)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999998  8888888777664

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.98  E-value=0.009  Score=58.34  Aligned_cols=44  Identities=18%  Similarity=0.270  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (280)
T 1xkq_A            6 NKTVIITGSSN--GIGRTTAILFAQEGANVTITGRSSERLEETRQIIL   51 (280)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877653

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.98  E-value=0.0078  Score=57.55  Aligned_cols=44  Identities=18%  Similarity=0.248  Sum_probs=38.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  | ++++.+++++++.
T Consensus         4 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   50 (246)
T 2uvd_A            4 GKVALVTGASR--GIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK   50 (246)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999988  6 8888888776653

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=95.98  E-value=0.0074  Score=58.10  Aligned_cols=45  Identities=18%  Similarity=0.195  Sum_probs=32.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus         6 ~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (257)
T 3tpc_A            6 KSRVFIVTGASS--GLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG   52 (257)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESSCC----------
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC
Confidence            346799999998  9999999999999999998  88888888877764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.96  E-value=0.0076  Score=58.12  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         5 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (260)
T 2qq5_A            5 GQVCVVTGASR--GIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ   50 (260)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  88888888877753

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.95  E-value=0.0058  Score=59.88  Aligned_cols=45  Identities=13%  Similarity=0.166  Sum_probs=40.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus        25 ~gk~~lVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~   71 (271)
T 4ibo_A           25 GGRTALVTGSSR--GLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFR   71 (271)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999999  89999988887753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.95  E-value=0.0083  Score=58.23  Aligned_cols=44  Identities=20%  Similarity=0.278  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |++++.+++++++.
T Consensus        26 ~k~vlITGas~--gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~   72 (272)
T 4e3z_A           26 TPVVLVTGGSR--GIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT   72 (272)
T ss_dssp             SCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHH
Confidence            46799999998  9999999999999999966   78888888877753

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=95.95  E-value=0.0079  Score=56.73  Aligned_cols=43  Identities=26%  Similarity=0.241  Sum_probs=38.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ..+.|+|+||||  -||+++|+.|.++|.+|.+  |+.++.+++++.
T Consensus        20 ~~~~ilVtGatG--~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~   64 (236)
T 3e8x_A           20 QGMRVLVVGANG--KVARYLLSELKNKGHEPVAMVRNEEQGPELRER   64 (236)
T ss_dssp             -CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT
T ss_pred             CCCeEEEECCCC--hHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC
Confidence            356899999999  9999999999999999998  999998887764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.94  E-value=0.0086  Score=57.24  Aligned_cols=44  Identities=18%  Similarity=0.208  Sum_probs=37.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  | ++++.+++++++.
T Consensus         7 ~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~   53 (261)
T 1gee_A            7 GKVVVITGSST--GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK   53 (261)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  7 7788887776653

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=95.93  E-value=0.0073  Score=56.02  Aligned_cols=39  Identities=10%  Similarity=0.078  Sum_probs=34.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +|+|+||||  -||+++++.|.++|.+|..  |+.++.+.+..
T Consensus         2 kilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~   42 (224)
T 3h2s_A            2 KIAVLGATG--RAGSAIVAEARRRGHEVLAVVRDPQKAADRLG   42 (224)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC
T ss_pred             EEEEEcCCC--HHHHHHHHHHHHCCCEEEEEEecccccccccC
Confidence            589999999  9999999999999999988  88888776643

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.93  E-value=0.0082  Score=57.50  Aligned_cols=44  Identities=25%  Similarity=0.319  Sum_probs=37.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   +++++.+++++++.
T Consensus         4 ~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~   50 (246)
T 3osu_A            4 TKSALVTGASR--GIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK   50 (246)
T ss_dssp             SCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999987   46788888877754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.92  E-value=0.01  Score=56.29  Aligned_cols=44  Identities=20%  Similarity=0.203  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         6 ~k~vlVtGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (251)
T 1zk4_A            6 GKVAIITGGTL--GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG   51 (251)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC
T ss_pred             CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh
Confidence            46799999998  9999999999999999988  88888888877654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.92  E-value=0.008  Score=58.85  Aligned_cols=46  Identities=15%  Similarity=0.193  Sum_probs=40.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus        27 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   74 (270)
T 3ftp_A           27 DKQVAIVTGASR--GIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ   74 (270)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999998  888899888777543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.91  E-value=0.014  Score=61.14  Aligned_cols=91  Identities=12%  Similarity=0.132  Sum_probs=66.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc----------ccce--------e-eeccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA----------QHNL--------V-LSTSY  411 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~----------~~~l--------~-~~~~~  411 (529)
                      .++|+++|+ |  .+|..+|+.|.+.|.+|++  ++.++++.+++ ++...          ..+-        . +..++
T Consensus       184 ~~kV~ViG~-G--~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          184 PASALVLGV-G--VAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             CCEEEEESC-S--HHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CCEEEEECc-h--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            368999999 5  9999999999999999998  88888888866 22211          0010        0 01134


Q ss_pred             cc--CcceEEEE-----c----CcCChhhhhcCCCCceeecccccCcc
Q 009674          412 AA--HKTKIWLV-----G----DDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       412 ~~--~~~~vwiv-----g----~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      ++  +++|++|.     |    ..++.+..++|+||++++|++ +++-
T Consensus       260 ~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA-~d~G  306 (381)
T 3p2y_A          260 EDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA-GETG  306 (381)
T ss_dssp             HHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT-GGGT
T ss_pred             HHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe-CCCC
Confidence            43  67788772     2    358999999999999999999 7765

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=95.91  E-value=0.0093  Score=58.70  Aligned_cols=45  Identities=22%  Similarity=0.231  Sum_probs=40.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.++++
T Consensus        28 ~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   74 (277)
T 3gvc_A           28 AGKVAIVTGAGA--GIGLAVARRLADEGCHVLCADIDGDAADAAATKIG   74 (277)
T ss_dssp             TTCEEEETTTTS--THHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC
Confidence            456899999998  9999999999999999998  89999998888763

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.91  E-value=0.0095  Score=56.35  Aligned_cols=43  Identities=19%  Similarity=0.247  Sum_probs=37.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-------EEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-------KVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-------~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+++|++|  -||+++|+.|+++|.       +|.+  |++++++++++++.
T Consensus         3 k~vlITGasg--giG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~   54 (244)
T 2bd0_A            3 HILLITGAGK--GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR   54 (244)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHH
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHH
Confidence            5799999998  999999999999998       8888  88888888877753

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=95.88  E-value=0.0099  Score=59.70  Aligned_cols=45  Identities=22%  Similarity=0.281  Sum_probs=40.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         8 ~k~vlVTGas~--gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~   54 (319)
T 3ioy_A            8 GRTAFVTGGAN--GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEA   54 (319)
T ss_dssp             TCEEEEETTTS--THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCch--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46899999998  9999999999999999988  999999988877543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=95.86  E-value=0.0085  Score=55.85  Aligned_cols=35  Identities=11%  Similarity=0.248  Sum_probs=30.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      +|+|+||+|  -||+++|+.|.++|.+|..  |+.++.+
T Consensus         2 ~ilItGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~   38 (219)
T 3dqp_A            2 KIFIVGSTG--RVGKSLLKSLSTTDYQIYAGARKVEQVP   38 (219)
T ss_dssp             EEEEESTTS--HHHHHHHHHHTTSSCEEEEEESSGGGSC
T ss_pred             eEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCccchh
Confidence            589999999  9999999999999999998  7665543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.86  E-value=0.0088  Score=56.47  Aligned_cols=42  Identities=26%  Similarity=0.331  Sum_probs=36.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+   |++++.+++++++
T Consensus         2 k~vlVTGasg--giG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~   46 (244)
T 1edo_A            2 PVVVVTGASR--GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI   46 (244)
T ss_dssp             CEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            5789999998  9999999999999999976   7788888777664

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.86  E-value=0.01  Score=58.23  Aligned_cols=44  Identities=14%  Similarity=0.212  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        18 ~k~vlVTGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~   63 (303)
T 1yxm_A           18 GQVAIVTGGAT--GIGKAIVKELLELGSNVVIASRKLERLKSAADELQ   63 (303)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888887777653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.85  E-value=0.022  Score=56.78  Aligned_cols=86  Identities=9%  Similarity=0.140  Sum_probs=61.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec-Cc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-DD  424 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-~~  424 (529)
                      ..++|.++|+ |  .||+++|+.|...|.+|+.  |+.++.+.+++ .+.+    .+...++++  +.+++++  +. ..
T Consensus       156 ~g~~v~IiG~-G--~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~----~~~~~~l~~~l~~aDvVi~~~p~~~  227 (300)
T 2rir_A          156 HGSQVAVLGL-G--RTGMTIARTFAALGANVKVGARSSAHLARITE-MGLV----PFHTDELKEHVKDIDICINTIPSMI  227 (300)
T ss_dssp             TTSEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCE----EEEGGGHHHHSTTCSEEEECCSSCC
T ss_pred             CCCEEEEEcc-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCe----EEchhhHHHHhhCCCEEEECCChhh
Confidence            4678999997 6  9999999999999999998  77777666544 2211    111234543  5667766  22 34


Q ss_pred             CChhhhhcCCCCceeeccccc
Q 009674          425 LTGKEQARAPKGTIFIPYTQI  445 (529)
Q Consensus       425 ~~~~~q~~a~~G~~f~~~~~~  445 (529)
                      ++.+....+++|++++++++-
T Consensus       228 i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          228 LNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             BCHHHHTTSCTTCEEEECSST
T ss_pred             hCHHHHHhCCCCCEEEEEeCC
Confidence            567788889999999999953

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=95.85  E-value=0.0082  Score=57.81  Aligned_cols=46  Identities=13%  Similarity=0.221  Sum_probs=40.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        11 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (252)
T 3f1l_A           11 NDRIILVTGASD--GIGREAAMTYARYGATVILLGRNEEKLRQVASHINE   58 (252)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  999999988877654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.84  E-value=0.01  Score=56.42  Aligned_cols=44  Identities=14%  Similarity=0.135  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc-cCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~-~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|++ +|.+|.+  |+.++.+++.+++.
T Consensus         4 ~k~vlITGasg--gIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~   50 (276)
T 1wma_A            4 IHVALVTGGNK--GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQ   50 (276)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHH
Confidence            46799999998  999999999999 9999998  88888887776653

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.83  E-value=0.014  Score=57.92  Aligned_cols=31  Identities=13%  Similarity=0.189  Sum_probs=29.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..++|+|+||||  -||+++++.|.++|.+|..
T Consensus        24 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   54 (351)
T 3ruf_A           24 SPKTWLITGVAG--FIGSNLLEKLLKLNQVVIG   54 (351)
T ss_dssp             SCCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCeEEEECCCc--HHHHHHHHHHHHCCCEEEE
Confidence            467899999999  9999999999999999988

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.83  E-value=0.0094  Score=58.60  Aligned_cols=45  Identities=16%  Similarity=0.334  Sum_probs=38.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  | +.++.+++++++..
T Consensus        25 ~k~~lVTGas~--GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~   72 (281)
T 3v2h_A           25 TKTAVITGSTS--GIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAG   72 (281)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhh
Confidence            46899999998  9999999999999999998  5 67788888777543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=95.83  E-value=0.0082  Score=58.94  Aligned_cols=46  Identities=20%  Similarity=0.273  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus        32 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   79 (275)
T 4imr_A           32 RGRTALVTGSSR--GIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA   79 (275)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh
Confidence            457899999998  9999999999999999998  899999888877543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=95.83  E-value=0.011  Score=57.88  Aligned_cols=47  Identities=17%  Similarity=0.191  Sum_probs=39.1

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .-..+.|+|+|++|  -||+++|+.|+++|.+|.+   ++.++.+++.+++.
T Consensus        28 ~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~   77 (271)
T 3v2g_A           28 SLAGKTAFVTGGSR--GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE   77 (271)
T ss_dssp             CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence            34567899999998  9999999999999999988   45677887777653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.83  E-value=0.014  Score=60.60  Aligned_cols=88  Identities=14%  Similarity=0.145  Sum_probs=63.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--cCc--
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDD--  424 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~--  424 (529)
                      .++|+++|+ |  .||+++|+.+...|.+|+.  ++.++++.+++..+...........++++  +.++++|.  |-.  
T Consensus       168 g~~V~ViG~-G--~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~  244 (377)
T 2vhw_A          168 PADVVVIGA-G--TAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA  244 (377)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence            468999998 8  9999999999999999888  88888888877654331100001113433  56677664  433  


Q ss_pred             -----CChhhhhcCCCCceeeccc
Q 009674          425 -----LTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       425 -----~~~~~q~~a~~G~~f~~~~  443 (529)
                           ++.+....+++|.++++++
T Consensus       245 ~t~~li~~~~l~~mk~g~~iV~va  268 (377)
T 2vhw_A          245 KAPKLVSNSLVAHMKPGAVLVDIA  268 (377)
T ss_dssp             CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred             CCcceecHHHHhcCCCCcEEEEEe
Confidence                 2677788899999999999

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.82  E-value=0.01  Score=56.88  Aligned_cols=44  Identities=16%  Similarity=0.172  Sum_probs=37.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  | ++++.+++.+++
T Consensus        20 ~~k~vlItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l   66 (274)
T 1ja9_A           20 AGKVALTTGAGR--GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL   66 (274)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHH
Confidence            356899999998  9999999999999999988  6 778887776664

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.80  E-value=0.04  Score=54.80  Aligned_cols=88  Identities=20%  Similarity=0.236  Sum_probs=61.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec-Cc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-DD  424 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-~~  424 (529)
                      ..++|.++|+ |  .||+++|+.|...|.+|+.  |+.++.+.+++ .+.+.    +...++++  +.+++++  +. ..
T Consensus       154 ~g~~v~IiG~-G--~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~----~~~~~l~~~l~~aDvVi~~~p~~~  225 (293)
T 3d4o_A          154 HGANVAVLGL-G--RVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEP----FHISKAAQELRDVDVCINTIPALV  225 (293)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTSEE----EEGGGHHHHTTTCSEEEECCSSCC
T ss_pred             CCCEEEEEee-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCee----cChhhHHHHhcCCCEEEECCChHH
Confidence            5678999996 6  9999999999999999988  67666665542 22211    11224443  5666655  22 34


Q ss_pred             CChhhhhcCCCCceeecccccCc
Q 009674          425 LTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       425 ~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                      ++.+....+++|++++++++-|.
T Consensus       226 i~~~~l~~mk~~~~lin~ar~~~  248 (293)
T 3d4o_A          226 VTANVLAEMPSHTFVIDLASKPG  248 (293)
T ss_dssp             BCHHHHHHSCTTCEEEECSSTTC
T ss_pred             hCHHHHHhcCCCCEEEEecCCCC
Confidence            56677888999999999996443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.79  E-value=0.0075  Score=58.15  Aligned_cols=45  Identities=13%  Similarity=0.296  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~-~~~l~~~~~~  399 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++ ++++++++..
T Consensus         4 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   51 (260)
T 1x1t_A            4 GKVAVVTGSTS--GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAA   51 (260)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHh
Confidence            35799999998  9999999999999999998  77777 8887776543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=95.79  E-value=0.0078  Score=57.18  Aligned_cols=46  Identities=15%  Similarity=0.211  Sum_probs=40.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        13 ~~k~vlITGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   60 (247)
T 3i1j_A           13 KGRVILVTGAAR--GIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS   60 (247)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  999999988887543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=95.79  E-value=0.014  Score=56.43  Aligned_cols=44  Identities=23%  Similarity=0.194  Sum_probs=38.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   52 (267)
T 2gdz_A            7 GKVALVTGAAQ--GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH   52 (267)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999988  88888877766654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.79  E-value=0.0096  Score=56.06  Aligned_cols=44  Identities=20%  Similarity=0.276  Sum_probs=39.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+.++++++++++.
T Consensus         5 ~k~vlVtGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (234)
T 2ehd_A            5 KGAVLITGASR--GIGEATARLLHAKGYRVGLMARDEKRLQALAAELE   50 (234)
T ss_dssp             CCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence            35799999998  9999999999999999988  88889988887764

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=95.79  E-value=0.007  Score=59.86  Aligned_cols=47  Identities=19%  Similarity=0.164  Sum_probs=41.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      +-+.++|+|+++  -||+|+|+.|+++|.+|.+  |+++++++..+++...
T Consensus         8 ~gKvalVTGas~--GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~   56 (255)
T 4g81_D            8 TGKTALVTGSAR--GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK   56 (255)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            356789999997  9999999999999999999  9999999888876543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.78  E-value=0.011  Score=58.75  Aligned_cols=44  Identities=20%  Similarity=0.310  Sum_probs=39.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus        26 ~k~vlVTGas~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~   71 (297)
T 1xhl_A           26 GKSVIITGSSN--GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL   71 (297)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=95.77  E-value=0.012  Score=60.55  Aligned_cols=90  Identities=13%  Similarity=0.122  Sum_probs=61.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcC----
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD----  423 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~----  423 (529)
                      ++|+++|+ |  .||+++|+.|.+.|.+|+.  ++.++++.++++.+...........++++  +.++++|  +|.    
T Consensus       167 ~~V~ViGa-G--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~  243 (369)
T 2eez_A          167 ASVVILGG-G--TVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAK  243 (369)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-----
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccc
Confidence            68999999 8  9999999999999999988  88888888876554321111001113333  4567766  331    


Q ss_pred             ---cCChhhhhcCCCCceeecccccCc
Q 009674          424 ---DLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       424 ---~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                         .++.+....+++|.++++++ .+.
T Consensus       244 ~~~li~~~~l~~mk~gg~iV~v~-~~~  269 (369)
T 2eez_A          244 APKLVTRDMLSLMKEGAVIVDVA-VDQ  269 (369)
T ss_dssp             --CCSCHHHHTTSCTTCEEEECC----
T ss_pred             cchhHHHHHHHhhcCCCEEEEEe-cCC
Confidence               24677788899999999998 443

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.76  E-value=0.012  Score=56.74  Aligned_cols=42  Identities=12%  Similarity=0.244  Sum_probs=36.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~--~~~l~~~~  397 (529)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |++++  .+++.+++
T Consensus         3 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   48 (258)
T 3a28_C            3 KVAMVTGGAQ--GIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLI   48 (258)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH
Confidence            5789999998  9999999999999999988  77777  77776664

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=95.76  E-value=0.046  Score=55.45  Aligned_cols=142  Identities=11%  Similarity=0.070  Sum_probs=87.1

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHHH-------HHHhc-CcCCCcEEEEecccCchhhHH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAAA-------VVVNS-LPKTTAHVLLRGTVTANKVAN  369 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnsltaa-------vv~~~-i~~~~~~V~~~Gatg~~kig~  369 (529)
                      .|+|+++.=-=|..+.+-.-.+..+.-+++ +.-..+.||+.+|+.       +.... -+++.++|.++|+ |  .+|+
T Consensus        62 ~g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~lt~~RTaa~s~laa~~la~~~~~~v~iIGa-G--~~a~  138 (322)
T 1omo_A           62 AGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGC-G--TQAY  138 (322)
T ss_dssp             EEEEEEEECTTTGGGTSCSCCEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-S--HHHH
T ss_pred             eEEEEEecCCCccccCCCceeEEEEEEECCCCCEEEEEcCchHHHHHHHHHHHHHHHhccCCCCCEEEEEcC-c--HHHH
Confidence            578887753222223333333355555554 455899999998752       12222 2567789999998 5  9999


Q ss_pred             HHHHHHhc-c-CcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CcceEEEE----cC-cCChhhhhcCCCCcee
Q 009674          370 AVASSLCQ-M-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV----GD-DLTGKEQARAPKGTIF  439 (529)
Q Consensus       370 ava~~L~~-~-~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv----g~-~~~~~~q~~a~~G~~f  439 (529)
                      +.+++|++ + ..+|.+  |++++.+++.+++.... .... ..++++ .++++++.    ++ .++.   .+.++|+++
T Consensus       139 ~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~-~~~~-~~~~~e~v~aDvVi~aTp~~~pv~~~---~~l~~G~~V  213 (322)
T 1omo_A          139 FQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG-ISAS-VQPAEEASRCDVLVTTTPSRKPVVKA---EWVEEGTHI  213 (322)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT-CCEE-ECCHHHHTSSSEEEECCCCSSCCBCG---GGCCTTCEE
T ss_pred             HHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcC-ceEE-ECCHHHHhCCCEEEEeeCCCCceecH---HHcCCCeEE
Confidence            99999995 3 455666  99999999988754321 1111 234443 35677662    22 1222   356899999


Q ss_pred             ecccccCcc
Q 009674          440 IPYTQIPPR  448 (529)
Q Consensus       440 ~~~~~~~~~  448 (529)
                      ++.+-..|.
T Consensus       214 ~~ig~~~p~  222 (322)
T 1omo_A          214 NAIGADGPG  222 (322)
T ss_dssp             EECSCCSTT
T ss_pred             EECCCCCCC
Confidence            998545444

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=95.75  E-value=0.011  Score=58.30  Aligned_cols=43  Identities=16%  Similarity=0.218  Sum_probs=39.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+|+|+++  -||+|+|+.|+++|.+|.+  |++++.++++++.+
T Consensus         3 K~vlVTGas~--GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~   47 (247)
T 3ged_A            3 RGVIVTGGGH--GIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERP   47 (247)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCT
T ss_pred             CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC
Confidence            6899999997  9999999999999999999  89999998888744

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.75  E-value=0.014  Score=56.07  Aligned_cols=45  Identities=20%  Similarity=0.275  Sum_probs=38.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        15 ~~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   61 (278)
T 2bgk_A           15 QDKVAIITGGAG--GIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG   61 (278)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC
T ss_pred             cCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhC
Confidence            356899999998  9999999999999999998  88888877777654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.74  E-value=0.012  Score=57.05  Aligned_cols=44  Identities=27%  Similarity=0.390  Sum_probs=36.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  | +++..+.+++++
T Consensus        28 ~~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   74 (271)
T 4iin_A           28 TGKNVLITGASK--GIGAEIAKTLASMGLKVWINYRSNAEVADALKNEL   74 (271)
T ss_dssp             SCCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  5 566666666654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.71  E-value=0.011  Score=57.14  Aligned_cols=44  Identities=18%  Similarity=0.227  Sum_probs=37.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |+.++.+++.+++.
T Consensus        26 ~k~vlVTGas~--gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~   72 (267)
T 4iiu_A           26 SRSVLVTGASK--GIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIV   72 (267)
T ss_dssp             CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH
Confidence            46799999998  9999999999999999965   77778877766643

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.68  E-value=0.01  Score=57.57  Aligned_cols=44  Identities=16%  Similarity=0.337  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  | ++++.+++.+++.
T Consensus        11 ~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   57 (276)
T 1mxh_A           11 CPAAVITGGAR--RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELN   57 (276)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  7 8888888877764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.67  E-value=0.014  Score=57.02  Aligned_cols=45  Identities=24%  Similarity=0.310  Sum_probs=38.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  | ++++.+++++++.
T Consensus        27 ~~k~vlVTGas~--gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~   74 (269)
T 4dmm_A           27 TDRIALVTGASR--GIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA   74 (269)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH
Confidence            467899999998  9999999999999999988  4 7778887777654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.66  E-value=0.019  Score=55.17  Aligned_cols=44  Identities=18%  Similarity=0.218  Sum_probs=36.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   ++++..+.+++++.
T Consensus         7 ~k~vlVTGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   53 (264)
T 3i4f_A            7 VRHALITAGTK--GLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK   53 (264)
T ss_dssp             CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTG
T ss_pred             cCEEEEeCCCc--hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH
Confidence            36799999998  9999999999999999988   45556666666543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.63  E-value=0.012  Score=55.33  Aligned_cols=42  Identities=19%  Similarity=0.304  Sum_probs=36.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++++++
T Consensus         2 k~vlITGasg--giG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~   46 (245)
T 2ph3_A            2 RKALITGASR--GIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEA   46 (245)
T ss_dssp             CEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            4789999998  9999999999999999887   6778888776664

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=95.63  E-value=0.05  Score=56.05  Aligned_cols=144  Identities=10%  Similarity=-0.035  Sum_probs=86.7

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHHH-------HHH-hcCcCCCcEEEEecccCchhhHH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAAA-------VVV-NSLPKTTAHVLLRGTVTANKVAN  369 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnsltaa-------vv~-~~i~~~~~~V~~~Gatg~~kig~  369 (529)
                      .|+|+++.=-=|....+-.-.+..+--+++ +.-+-+.||+.+|+.       +.. .-.+++.++|.++|+ |  .+|+
T Consensus        66 ~g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~lT~~RTaa~s~laa~~la~~~~~~v~iIGa-G--~~a~  142 (350)
T 1x7d_A           66 YAFKYVNGHPANTARNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGN-G--AQSE  142 (350)
T ss_dssp             EEEEEEEECGGGGGGTCCSEEEEEEEEETTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-S--TTHH
T ss_pred             EEEEEEEecCCcccCCCccEEEEEEEEECCCCCEEEEEcCCEEEeehhhHHHHHHHHHhccccCCeEEEECC-c--HHHH
Confidence            678877652222222121112233333443 356889999988642       111 223567789999997 5  8999


Q ss_pred             HHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCc-------CChhhhhcCCCC
Q 009674          370 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD-------LTGKEQARAPKG  436 (529)
Q Consensus       370 ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~-------~~~~~q~~a~~G  436 (529)
                      ++++.|+  +...+|.+  |++++.+++++++....+.......++++  +++++++.-..       ++.   .+.++|
T Consensus       143 ~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~~~pvl~~---~~l~~G  219 (350)
T 1x7d_A          143 FQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITP---DMLEPG  219 (350)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSEEEEECG---GGCCTT
T ss_pred             HHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCCCCceecH---HHcCCC
Confidence            9999987  33456766  89999999988864321212112336654  67788763222       222   356899


Q ss_pred             ceeecccccCcc
Q 009674          437 TIFIPYTQIPPR  448 (529)
Q Consensus       437 ~~f~~~~~~~~~  448 (529)
                      ++++.++-..|.
T Consensus       220 ~~V~~vgs~~p~  231 (350)
T 1x7d_A          220 MHLNAVGGDCPG  231 (350)
T ss_dssp             CEEEECSCCBTT
T ss_pred             CEEEECCCCCCC
Confidence            999998854443

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.63  E-value=0.016  Score=56.31  Aligned_cols=46  Identities=13%  Similarity=0.203  Sum_probs=38.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-----~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+     ++.++.+++++++..
T Consensus        10 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~   60 (262)
T 3ksu_A           10 KNKVIVIAGGIK--NLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED   60 (262)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999998     355677877777543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.61  E-value=0.013  Score=57.87  Aligned_cols=47  Identities=13%  Similarity=0.007  Sum_probs=40.5

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ...+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus       117 l~gk~vlVtGaaG--GiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~  165 (287)
T 1lu9_A          117 VKGKKAVVLAGTG--PVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK  165 (287)
T ss_dssp             CTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHh
Confidence            3457899999998  9999999999999999888  888999988877643

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.61  E-value=0.015  Score=57.12  Aligned_cols=45  Identities=11%  Similarity=0.179  Sum_probs=38.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   +++++.+++.+++.
T Consensus        28 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~   75 (280)
T 4da9_A           28 ARPVAIVTGGRR--GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS   75 (280)
T ss_dssp             CCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCC--HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH
Confidence            456799999998  9999999999999999988   47788888877754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.60  E-value=0.011  Score=57.57  Aligned_cols=31  Identities=13%  Similarity=0.186  Sum_probs=28.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC  386 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~  386 (529)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+
T Consensus         5 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~   37 (313)
T 1qyd_A            5 SRVLIVGGTG--YIGKRIVNASISLGHPTYVLFRP   37 (313)
T ss_dssp             CCEEEESTTS--TTHHHHHHHHHHTTCCEEEECCS
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHhCCCcEEEEECC
Confidence            5699999999  9999999999999998887  66

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=95.59  E-value=0.014  Score=56.77  Aligned_cols=45  Identities=29%  Similarity=0.326  Sum_probs=38.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   +++++.+++++++.
T Consensus        17 ~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~   64 (270)
T 3is3_A           17 DGKVALVTGSGR--GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK   64 (270)
T ss_dssp             TTCEEEESCTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988   56777887777753

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.59  E-value=0.01  Score=57.80  Aligned_cols=32  Identities=9%  Similarity=0.121  Sum_probs=28.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  387 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~  387 (529)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+.
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~   36 (307)
T 2gas_A            3 NKILILGPTG--AIGRHIVWASIKAGNPTYALVRKT   36 (307)
T ss_dssp             CCEEEESTTS--TTHHHHHHHHHHHTCCEEEEECCS
T ss_pred             cEEEEECCCc--hHHHHHHHHHHhCCCcEEEEECCC
Confidence            4699999999  9999999999999988877  765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.58  E-value=0.013  Score=55.45  Aligned_cols=43  Identities=14%  Similarity=0.230  Sum_probs=36.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++++++
T Consensus         5 ~~~vlItGasg--giG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~   50 (247)
T 2hq1_A            5 GKTAIVTGSSR--GLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEF   50 (247)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHH
T ss_pred             CcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHH
Confidence            35799999998  9999999999999999987   5667777776654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.58  E-value=0.0051  Score=57.31  Aligned_cols=36  Identities=17%  Similarity=0.247  Sum_probs=32.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      ++|+|+||||  -||+++++.|.++|.+|..  |++++.+
T Consensus         5 ~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~   42 (227)
T 3dhn_A            5 KKIVLIGASG--FVGSALLNEALNRGFEVTAVVRHPEKIK   42 (227)
T ss_dssp             CEEEEETCCH--HHHHHHHHHHHTTTCEEEEECSCGGGCC
T ss_pred             CEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEEcCcccch
Confidence            5799999999  9999999999999999998  7766654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=95.57  E-value=0.0079  Score=62.16  Aligned_cols=113  Identities=12%  Similarity=0.012  Sum_probs=63.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCccccccceeeeccccc-CcceE-EEEcCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIPVEAQHNLVLSTSYAA-HKTKI-WLVGDD  424 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~v-wivg~~  424 (529)
                      ..+.|+|+||||  -||+++|+.|.++|.+|.+  |+.+   ..+++++++......      .+.+ ...++ ++.||.
T Consensus        68 ~~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~v~~v~~Dl  139 (427)
T 4f6c_A           68 PLGNTLLTGATG--FLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSE------ETVEMMLSNIEVIVGDF  139 (427)
T ss_dssp             CCEEEEEECTTS--HHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCH------HHHHHHHTTEEEEEECC
T ss_pred             CCCEEEEecCCc--HHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccc------cccccccCceEEEeCCC
Confidence            346899999999  9999999999999999988  7666   445554443221100      0011 11223 667777


Q ss_pred             CChhhhhcCCCCceeecccccCccCCCCCceeecCCccccCCCCccccccccccCcchhHHHHH
Q 009674          425 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRI  488 (529)
Q Consensus       425 ~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a  488 (529)
                      -+++...                ..-+-|++|+..+.+..+.+++.+..-|..-....+.||..
T Consensus       140 ~d~~~l~----------------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~  187 (427)
T 4f6c_A          140 ECMDDVV----------------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ  187 (427)
T ss_dssp             ---CCCC----------------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCC----------------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            6655552                11346788877666655555554444455555666666654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.56  E-value=0.011  Score=57.94  Aligned_cols=44  Identities=18%  Similarity=0.284  Sum_probs=38.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+. ++.+++++++.
T Consensus        23 ~k~~lVTGas~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~   69 (288)
T 2x9g_A           23 APAAVVTGAAK--RIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELN   69 (288)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  777 88888877654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.55  E-value=0.022  Score=60.26  Aligned_cols=89  Identities=11%  Similarity=0.110  Sum_probs=64.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc--------------cccee-eec------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA--------------QHNLV-LST------  409 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~--------------~~~l~-~~~------  409 (529)
                      .++|+++|+ |  .+|..+|+.|...|.+|++  ++.++++.+++. +...              +.+ . ..+      
T Consensus       190 ~~kV~ViG~-G--~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~y-a~e~s~~~~~~  264 (405)
T 4dio_A          190 AAKIFVMGA-G--VAGLQAIATARRLGAVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGY-AKEMSGEYQVK  264 (405)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-TCEECCCCC------------------CHHHHH
T ss_pred             CCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccch-hhhcchhhhhh
Confidence            368999999 5  9999999999999999998  888888888763 2211              001 1 111      


Q ss_pred             ---cccc--CcceEEEEc---------CcCChhhhhcCCCCceeecccccCc
Q 009674          410 ---SYAA--HKTKIWLVG---------DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       410 ---~~~~--~~~~vwivg---------~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                         ++++  +.+||+|-.         ..++++..++|+||++++|+| +++
T Consensus       265 ~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA-~d~  315 (405)
T 4dio_A          265 QAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA-VER  315 (405)
T ss_dssp             HHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT-GGG
T ss_pred             hHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe-CCC
Confidence               3333  677887622         348999999999999999999 554

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.54  E-value=0.004  Score=59.15  Aligned_cols=38  Identities=24%  Similarity=0.238  Sum_probs=32.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEK  392 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~  392 (529)
                      .++|+|+||+|  -||+++|+.|.++| .+|.+  |++++.++
T Consensus        23 mk~vlVtGatG--~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~   63 (236)
T 3qvo_A           23 MKNVLILGAGG--QIARHVINQLADKQTIKQTLFARQPAKIHK   63 (236)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHTTCTTEEEEEEESSGGGSCS
T ss_pred             ccEEEEEeCCc--HHHHHHHHHHHhCCCceEEEEEcChhhhcc
Confidence            46899999999  99999999999999 88888  87776553

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.53  E-value=0.014  Score=56.95  Aligned_cols=45  Identities=20%  Similarity=0.238  Sum_probs=38.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   +++++.+++++++.
T Consensus        26 ~~k~~lVTGas~--GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~   73 (267)
T 3u5t_A           26 TNKVAIVTGASR--GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE   73 (267)
T ss_dssp             -CCEEEEESCSS--HHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999987   67778888777643

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.52  E-value=0.015  Score=55.66  Aligned_cols=43  Identities=14%  Similarity=0.251  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |++++++++.+++
T Consensus         5 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (245)
T 1uls_A            5 DKAVLITGAAH--GIGRATLELFAKEGARLVACDIEEGPLREAAEAV   49 (245)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence            36799999998  9999999999999999998  8889998888776

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.49  E-value=0.0074  Score=61.93  Aligned_cols=90  Identities=10%  Similarity=0.095  Sum_probs=61.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccce-ee-e--ccccc--CcceEEE--E
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL-VL-S--TSYAA--HKTKIWL--V  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l-~~-~--~~~~~--~~~~vwi--v  421 (529)
                      ..++|+|+|+..  -||+.+|+.|.+.|.+|++  |+..+..+..+++........ +. .  .++++  +++||+|  +
T Consensus       176 ~gk~vvVIG~G~--iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt  253 (320)
T 1edz_A          176 YGKKCIVINRSE--IVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  253 (320)
T ss_dssp             TTCEEEEECCCT--TTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCEEEEECCCc--chHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence            578999999984  6799999999999999998  665555444444443221110 00 1  35554  6778877  4


Q ss_pred             cCc---CChhhhhcCCCCceeecccccCc
Q 009674          422 GDD---LTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       422 g~~---~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                      |..   ++.+..   ++|++++|++ +|+
T Consensus       254 g~p~~vI~~e~v---k~GavVIDVg-i~r  278 (320)
T 1edz_A          254 PSENYKFPTEYI---KEGAVCINFA-CTK  278 (320)
T ss_dssp             CCTTCCBCTTTS---CTTEEEEECS-SSC
T ss_pred             CCCcceeCHHHc---CCCeEEEEcC-CCc
Confidence            442   666665   8999999999 654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=95.47  E-value=0.014  Score=48.53  Aligned_cols=39  Identities=15%  Similarity=0.129  Sum_probs=34.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLK  394 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~  394 (529)
                      .++|+++|+ |  .+|+++++.|.++| .+|.+  |++++.+.++
T Consensus         5 ~~~v~I~G~-G--~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~   46 (118)
T 3ic5_A            5 RWNICVVGA-G--KIGQMIAALLKTSSNYSVTVADHDLAALAVLN   46 (118)
T ss_dssp             CEEEEEECC-S--HHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred             cCeEEEECC-C--HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence            357999999 9  99999999999999 88877  8888888776

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.47  E-value=0.019  Score=55.99  Aligned_cols=45  Identities=13%  Similarity=0.220  Sum_probs=38.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-------------chhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-------------CKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-------------~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |             ++++++++++++.
T Consensus        14 ~gk~~lVTGas~--gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (280)
T 3pgx_A           14 QGRVAFITGAAR--GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE   73 (280)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  5             6788888877643

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=95.46  E-value=0.014  Score=53.81  Aligned_cols=38  Identities=8%  Similarity=0.115  Sum_probs=34.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      +|+|+||||  -||+++++.|.++|.+|..  |++++.+.+.
T Consensus         2 kvlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~   41 (221)
T 3ew7_A            2 KIGIIGATG--RAGSRILEEAKNRGHEVTAIVRNAGKITQTH   41 (221)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCSHHHHHHC
T ss_pred             eEEEEcCCc--hhHHHHHHHHHhCCCEEEEEEcCchhhhhcc
Confidence            589999999  9999999999999999988  8888887664

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=95.44  E-value=0.017  Score=56.35  Aligned_cols=44  Identities=14%  Similarity=0.242  Sum_probs=39.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         9 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   54 (270)
T 1yde_A            9 GKVVVVTGGGR--GIGAGIVRAFVNSGARVVICDKDESGGRALEQELP   54 (270)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            46799999998  9999999999999999998  88899988887764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=95.44  E-value=0.02  Score=55.40  Aligned_cols=44  Identities=18%  Similarity=0.212  Sum_probs=37.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   ++.++.+++.+++
T Consensus         7 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~   53 (259)
T 3edm_A            7 TNRTIVVAGAGR--DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEI   53 (259)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998   5667777666664

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=95.44  E-value=0.014  Score=57.23  Aligned_cols=45  Identities=16%  Similarity=0.217  Sum_probs=39.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus        28 ~~k~vlVTGas~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~   74 (276)
T 2b4q_A           28 AGRIALVTGGSR--GIGQMIAQGLLEAGARVFICARDAEACADTATRLS   74 (276)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888888877754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=95.43  E-value=0.014  Score=56.64  Aligned_cols=46  Identities=15%  Similarity=0.127  Sum_probs=40.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         7 ~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   54 (265)
T 3lf2_A            7 SEAVAVVTGGSS--GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQ   54 (265)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  999999888877644

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.42  E-value=0.014  Score=57.77  Aligned_cols=46  Identities=22%  Similarity=0.226  Sum_probs=39.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc---EEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI---KVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~---~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.   +|.+  |+.++++++++++..
T Consensus        32 ~~k~~lVTGas~--GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~   82 (287)
T 3rku_A           32 AKKTVLITGASA--GIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQ   82 (287)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHh
Confidence            356899999998  999999999999887   8888  999999998887644

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.39  E-value=0.017  Score=54.39  Aligned_cols=43  Identities=19%  Similarity=0.220  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.++.
T Consensus         7 ~~~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   51 (244)
T 1cyd_A            7 GLRALVTGAGK--GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC   51 (244)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence            46799999998  9999999999999999988  8888888887764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=95.38  E-value=0.018  Score=54.46  Aligned_cols=44  Identities=20%  Similarity=0.334  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |++++++++.++++
T Consensus         7 ~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (244)
T 3d3w_A            7 GRRVLVTGAGK--GIGRGTVQALHATGARVVAVSRTQADLDSLVRECP   52 (244)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST
T ss_pred             CcEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC
Confidence            46799999998  9999999999999999988  88888888877653

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.38  E-value=0.036  Score=54.06  Aligned_cols=79  Identities=13%  Similarity=0.131  Sum_probs=53.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CcceEEEEcCcCC--h--
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGDDLT--G--  427 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~~~~--~--  427 (529)
                      +|.++|+ |  .+|+++|+.|.+.|.+|++  |+.++.+++.++.+..       ..++++ ++++++|.-...+  +  
T Consensus       118 ~v~iiG~-G--~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-------~~~~~~~~~~Divi~~tp~~~~~~~  187 (263)
T 2d5c_A          118 PALVLGA-G--GAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-------AVPLEKAREARLLVNATRVGLEDPS  187 (263)
T ss_dssp             CEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-------ECCGGGGGGCSEEEECSSTTTTCTT
T ss_pred             eEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-------hhhHhhccCCCEEEEccCCCCCCCC
Confidence            8999997 6  8999999999999988888  8888888888765432       122332 4566666321111  1  


Q ss_pred             ---hhhhcCCCCceeeccc
Q 009674          428 ---KEQARAPKGTIFIPYT  443 (529)
Q Consensus       428 ---~~q~~a~~G~~f~~~~  443 (529)
                         -+...+++|+++++++
T Consensus       188 ~~~l~~~~l~~g~~viD~~  206 (263)
T 2d5c_A          188 ASPLPAELFPEEGAAVDLV  206 (263)
T ss_dssp             CCSSCGGGSCSSSEEEESC
T ss_pred             CCCCCHHHcCCCCEEEEee
Confidence               0123457788888877

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.36  E-value=0.015  Score=56.37  Aligned_cols=50  Identities=20%  Similarity=0.147  Sum_probs=40.3

Q ss_pred             HhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          346 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       346 ~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      .+..+-..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus        27 ~~~~~l~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~   78 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSG--GIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ   78 (279)
T ss_dssp             GGGGCCTTCEEEETTTTS--SHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            333344567899999998  9999999999999999998  7777777766554

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.36  E-value=0.014  Score=55.89  Aligned_cols=44  Identities=11%  Similarity=0.124  Sum_probs=36.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   |+.++.+++.+++
T Consensus        12 ~~k~vlITGas~--giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~   58 (256)
T 3ezl_A           12 SQRIAYVTGGMG--GIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ   58 (256)
T ss_dssp             -CEEEEETTTTS--HHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            578899999998  9999999999999999988   6666666655553

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=95.33  E-value=0.023  Score=57.10  Aligned_cols=120  Identities=11%  Similarity=-0.002  Sum_probs=74.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  411 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~  411 (529)
                      |||-....+.--..++...++|+|+|+.   -.|+|++..|.+.|. +|++  |+.++.++|.+++....      ..++
T Consensus       104 TD~~G~~~~L~~~~~~~~~k~vlvlGaG---Gaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~------~~~l  174 (282)
T 3fbt_A          104 TDYIGFGKMLSKFRVEIKNNICVVLGSG---GAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVIS------YDEL  174 (282)
T ss_dssp             CHHHHHHHHHHHTTCCCTTSEEEEECSS---TTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEE------HHHH
T ss_pred             CcHHHHHHHHHHcCCCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCccc------HHHH
Confidence            5665554444333455567899999985   579999999999998 8888  99999999987753111      1111


Q ss_pred             ccCcceEEE----EcCc--C--ChhhhhcCCCCceeecccccCcc------CCC-CCceeecCCcccc
Q 009674          412 AAHKTKIWL----VGDD--L--TGKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII  464 (529)
Q Consensus       412 ~~~~~~vwi----vg~~--~--~~~~q~~a~~G~~f~~~~~~~~~------~~R-~dc~y~~~~a~~~  464 (529)
                      ++.+++++|    +|-.  .  .|-+....+++++++|+. ..|.      +.| +-|.+..+..|-+
T Consensus       175 ~~l~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~Dlv-Y~P~~T~ll~~A~~~G~~~~~Gl~MLv  241 (282)
T 3fbt_A          175 SNLKGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLI-YNPVETLFLKYARESGVKAVNGLYMLV  241 (282)
T ss_dssp             TTCCCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESC-CSSSSCHHHHHHHHTTCEEECSHHHHH
T ss_pred             HhccCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEe-eCCCCCHHHHHHHHCcCeEeCcHHHHH
Confidence            111456666    2310  0  011222347888899988 4443      223 5688877777755

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=95.32  E-value=0.018  Score=55.41  Aligned_cols=44  Identities=16%  Similarity=0.167  Sum_probs=39.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |++++.+++++++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (260)
T 2z1n_A            7 GKLAVVTAGSS--GLGFASALELARNGARLLLFSRNREKLEAAASRIA   52 (260)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.31  E-value=0.02  Score=55.14  Aligned_cols=43  Identities=16%  Similarity=0.234  Sum_probs=37.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+|+|++|  -||+++|+.|+++|  .+|.+  |+++++++++++++
T Consensus         3 k~~lVTGas~--GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~   49 (254)
T 3kzv_A            3 KVILVTGVSR--GIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG   49 (254)
T ss_dssp             CEEEECSTTS--HHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG
T ss_pred             CEEEEECCCc--hHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC
Confidence            5789999998  99999999999874  78877  89999999988764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.31  E-value=0.02  Score=55.65  Aligned_cols=44  Identities=16%  Similarity=0.271  Sum_probs=36.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~------------~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++.+++
T Consensus        12 ~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   69 (278)
T 3sx2_A           12 TGKVAFITGAAR--GQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV   69 (278)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHH
Confidence            457899999998  9999999999999999998  55            66777666554

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.29  E-value=0.015  Score=57.07  Aligned_cols=32  Identities=3%  Similarity=0.000  Sum_probs=28.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  387 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~  387 (529)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+.
T Consensus         5 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~   38 (321)
T 3c1o_A            5 EKIIIYGGTG--YIGKFMVRASLSFSHPTFIYARPL   38 (321)
T ss_dssp             CCEEEETTTS--TTHHHHHHHHHHTTCCEEEEECCC
T ss_pred             cEEEEEcCCc--hhHHHHHHHHHhCCCcEEEEECCc
Confidence            4699999999  9999999999999988887  664

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=95.29  E-value=0.018  Score=55.44  Aligned_cols=47  Identities=15%  Similarity=0.234  Sum_probs=34.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|++-||+++|+.|+++|.+|.+  |+.+   ..+++.++.+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~   57 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD   57 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC
Confidence            346899999997123999999999999999998  5553   3344444433

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.27  E-value=0.022  Score=55.32  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=36.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~------------~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++++++
T Consensus         9 ~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (287)
T 3pxx_A            9 QDKVVLVTGGAR--GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV   66 (287)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHH
Confidence            356899999998  9999999999999999998  55            66777766654

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.27  E-value=0.029  Score=49.86  Aligned_cols=42  Identities=26%  Similarity=0.355  Sum_probs=34.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~~  397 (529)
                      ..+|+++|+ |  .+|+.+|+.|.+.|.+|++  ++ +++.+.+++..
T Consensus         3 ~~~vlI~G~-G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~   47 (153)
T 1id1_A            3 KDHFIVCGH-S--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL   47 (153)
T ss_dssp             CSCEEEECC-S--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH
T ss_pred             CCcEEEECC-C--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh
Confidence            457999997 7  9999999999999999998  65 56677776543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.27  E-value=0.014  Score=57.48  Aligned_cols=33  Identities=12%  Similarity=0.180  Sum_probs=29.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+.+
T Consensus        12 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~   46 (318)
T 2r6j_A           12 SKILIFGGTG--YIGNHMVKGSLKLGHPTYVFTRPNS   46 (318)
T ss_dssp             CCEEEETTTS--TTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred             CeEEEECCCc--hHHHHHHHHHHHCCCcEEEEECCCC
Confidence            4699999999  9999999999999988877  6653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.27  E-value=0.025  Score=55.43  Aligned_cols=32  Identities=13%  Similarity=0.051  Sum_probs=29.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  387 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~  387 (529)
                      ++|+|+||||  -||+++++.|.++|.+|..  |+.
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~   36 (311)
T 3m2p_A            3 LKIAVTGGTG--FLGQYVVESIKNDGNTPIILTRSI   36 (311)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCC
T ss_pred             CEEEEECCCc--HHHHHHHHHHHhCCCEEEEEeCCC
Confidence            5799999999  9999999999999999988  553

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.26  E-value=0.018  Score=57.47  Aligned_cols=45  Identities=11%  Similarity=0.199  Sum_probs=36.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch----hhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK----DDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~----~~~~~l~~~~~  398 (529)
                      ..+.|+|+|+||  -||+++++.|.++|.+|..  |+.    ++++.+++++.
T Consensus        26 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~   76 (352)
T 1sb8_A           26 QPKVWLITGVAG--FIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVS   76 (352)
T ss_dssp             SCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSC
T ss_pred             cCCeEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcc
Confidence            346899999999  9999999999999999988  543    45666666554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=95.22  E-value=0.02  Score=55.57  Aligned_cols=45  Identities=27%  Similarity=0.320  Sum_probs=39.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        31 ~~k~vlVTGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   77 (279)
T 1xg5_A           31 RDRLALVTGASG--GIGAAVARALVQQGLKVVGCARTVGNIEELAAECK   77 (279)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888888877643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.21  E-value=0.026  Score=55.13  Aligned_cols=44  Identities=18%  Similarity=0.296  Sum_probs=37.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc----------------hhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------------KDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~----------------~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+                +++++++++++
T Consensus        10 ~~k~~lVTGas~--gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (286)
T 3uve_A           10 EGKVAFVTGAAR--GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV   71 (286)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  55                67777776664

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.18  E-value=0.024  Score=53.95  Aligned_cols=44  Identities=25%  Similarity=0.284  Sum_probs=37.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++.+++.
T Consensus         7 ~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   53 (255)
T 3icc_A            7 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ   53 (255)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH
Confidence            46799999998  9999999999999999977   67778877776643

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.18  E-value=0.013  Score=53.27  Aligned_cols=36  Identities=11%  Similarity=0.128  Sum_probs=31.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      ++|+++|+||  .||+++++.|.++|.+|..  |++++.+
T Consensus         4 ~~ilVtGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~   41 (206)
T 1hdo_A            4 KKIAIFGATG--QTGLTTLAQAVQAGYEVTVLVRDSSRLP   41 (206)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCGGGSC
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeChhhcc
Confidence            5799999999  9999999999999999988  7766543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.13  E-value=0.027  Score=54.85  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=35.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~------------~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++.+++
T Consensus         9 ~~k~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   66 (281)
T 3s55_A            9 EGKTALITGGAR--GMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV   66 (281)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  65            55666655543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.12  E-value=0.0098  Score=58.52  Aligned_cols=34  Identities=18%  Similarity=0.168  Sum_probs=30.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      +.|+|+|++|  -||+++|+.|.++|.+|..  |+.++
T Consensus         4 ~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~~   39 (345)
T 2z1m_A            4 KRALITGIRG--QDGAYLAKLLLEKGYEVYGADRRSGE   39 (345)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            5799999999  9999999999999999988  65544

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.10  E-value=0.028  Score=54.47  Aligned_cols=45  Identities=16%  Similarity=0.279  Sum_probs=37.4

Q ss_pred             CcEEEEecc--cCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCcc
Q 009674          353 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Ga--tg~~kig~ava~~L~~~~~~v~l--~~~~~-~~~l~~~~~~  399 (529)
                      .+.|+|+|+  +|  -||+++|+.|+++|.+|.+  |+.++ +++++++++.
T Consensus         7 ~k~vlVTGa~~s~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   56 (269)
T 2h7i_A            7 GKRILVSGIITDS--SIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPA   56 (269)
T ss_dssp             TCEEEECCCSSTT--SHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSS
T ss_pred             CCEEEEECCCCCC--chHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCC
Confidence            367999999  76  8999999999999999998  77666 5788777643

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.09  E-value=0.012  Score=58.16  Aligned_cols=42  Identities=17%  Similarity=0.188  Sum_probs=33.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.++..++
T Consensus         5 ~~~vlVTGatG--~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~   48 (341)
T 3enk_A            5 KGTILVTGGAG--YIGSHTAVELLAHGYDVVIADNLVNSKREAIAR   48 (341)
T ss_dssp             SCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHH
T ss_pred             CcEEEEecCCc--HHHHHHHHHHHHCCCcEEEEecCCcchHHHHHH
Confidence            35899999999  9999999999999999988  655554444333

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.09  E-value=0.016  Score=56.37  Aligned_cols=31  Identities=19%  Similarity=0.210  Sum_probs=27.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC  386 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~  386 (529)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+
T Consensus         5 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~   37 (308)
T 1qyc_A            5 SRILLIGATG--YIGRHVAKASLDLGHPTFLLVRE   37 (308)
T ss_dssp             CCEEEESTTS--TTHHHHHHHHHHTTCCEEEECCC
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHhCCCCEEEEECC
Confidence            5699999999  9999999999999988877  65

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.09  E-value=0.027  Score=54.61  Aligned_cols=43  Identities=16%  Similarity=0.258  Sum_probs=34.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR  396 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~  396 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+   ++.++.+++.++
T Consensus        24 ~~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~   69 (269)
T 3gk3_A           24 AKRVAFVTGGMG--GLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH   69 (269)
T ss_dssp             CCCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHH
T ss_pred             cCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH
Confidence            356789999998  9999999999999999988   555566655544

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=95.08  E-value=0.04  Score=52.74  Aligned_cols=38  Identities=16%  Similarity=0.303  Sum_probs=33.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEK  392 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~  392 (529)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |++ +++++
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~   47 (249)
T 2ew8_A            7 DKLAVITGGAN--GIGRAIAERFAVEGADIAIADLVPAPEAEA   47 (249)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCchhHHHH
Confidence            46799999998  9999999999999999988  776 66654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.07  E-value=0.018  Score=55.89  Aligned_cols=46  Identities=20%  Similarity=0.278  Sum_probs=40.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus         9 ~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   56 (267)
T 3t4x_A            9 KGKTALVTGSTA--GIGKAIATSLVAEGANVLINGRREENVNETIKEIRA   56 (267)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            346799999998  9999999999999999999  888888888777544

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=95.07  E-value=0.044  Score=58.41  Aligned_cols=149  Identities=15%  Similarity=0.120  Sum_probs=96.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--c--C
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G--D  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g--~  423 (529)
                      ..++|.|+|.-   .||+++|+.|...|.+|+.  ++..+.+  +.. ..+     ..+.++++  +.+++++.  |  .
T Consensus       219 ~GktV~ViG~G---~IGk~vA~~Lra~Ga~Viv~D~dp~ra~--~A~-~~G-----~~v~~Leeal~~ADIVi~atgt~~  287 (435)
T 3gvp_A          219 GGKQVVVCGYG---EVGKGCCAALKAMGSIVYVTEIDPICAL--QAC-MDG-----FRLVKLNEVIRQVDIVITCTGNKN  287 (435)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHH--HHH-HTT-----CEECCHHHHTTTCSEEEECSSCSC
T ss_pred             cCCEEEEEeeC---HHHHHHHHHHHHCCCEEEEEeCChhhhH--HHH-HcC-----CEeccHHHHHhcCCEEEECCCCcc
Confidence            46799999985   9999999999999999998  4444332  221 111     11335554  56666552  2  4


Q ss_pred             cCChhhhhcCCCCceeecccccCcc----CCCC-Cce----------e--ecCCccc-cCC-CCccccccccccCcchhH
Q 009674          424 DLTGKEQARAPKGTIFIPYTQIPPR----KLRK-DCF----------Y--HSTPAMI-IPP-SLSNMHSCENWLGRRVMS  484 (529)
Q Consensus       424 ~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~-dc~----------y--~~~~a~~-~P~-~~~~~~~~e~~~p~r~~~  484 (529)
                      .|+.+....|++|+++|.+++.+++    .++. ...          |  +.+-.+. +.+ .+-|+. |- +.|..+|+
T Consensus       288 lI~~e~l~~MK~gailINvgrg~~EId~~~L~~~~~~~~~ir~~v~~y~~~dg~~I~LLAeGrLvNl~-~~-~hp~~vm~  365 (435)
T 3gvp_A          288 VVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVRSQVDHVIWPDGKRIVLLAEGRLLNLS-CS-TVPTFVLS  365 (435)
T ss_dssp             SBCHHHHHHSCTTEEEEECSSTTTTBTGGGGCSTTCEEEEEETTEEEEECTTSCEEEEEGGGSBHHHH-HC-CCCHHHHH
T ss_pred             cCCHHHHHhcCCCcEEEEecCCCccCCHHHHHhhcceeEEEEcCeeeEEcCCCcEEEEecCCCEeeec-CC-CCcHHHHh
Confidence            5888999999999999999985543    3321 111          1  1111111 222 354676 66 59999999


Q ss_pred             HHHHhhHhhhhcCCCCC--ccch-h---hhhHHHH
Q 009674          485 AWRIAGIIHALEGWDLN--ECGQ-T---MCDIHQV  513 (529)
Q Consensus       485 Ac~a~~~v~alEgw~~~--e~G~-i---v~~id~i  513 (529)
                      -.++--.+-..|=|..+  .... +   .+++|+-
T Consensus       366 ~sf~~q~la~~~l~~~~~~~~~~~v~~lp~~~d~~  400 (435)
T 3gvp_A          366 ITATTQALALIELYNAPEGRYKQDVYLLPKKMDEY  400 (435)
T ss_dssp             HHHHHHHHHHHHHHHCCTTTSCSSEEECCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcccccCCCeeeCCHHHHHH
Confidence            99998888888777663  3333 2   3777653

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=95.03  E-value=0.03  Score=54.86  Aligned_cols=44  Identities=16%  Similarity=0.231  Sum_probs=35.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+ .+.++.+++.+++
T Consensus        30 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   74 (273)
T 3uf0_A           30 AGRTAVVTGAGS--GIGRAIAHGYARAGAHVLAWGRTDGVKEVADEI   74 (273)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHH
Confidence            457899999998  9999999999999999998 3345556665554

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=95.03  E-value=0.028  Score=55.46  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=34.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh-hHHHHHhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD-DYEKLKLR  396 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~-~~~~l~~~  396 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++ ..+.++++
T Consensus        46 ~gk~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~   91 (291)
T 3ijr_A           46 KGKNVLITGGDS--GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQY   91 (291)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH
Confidence            356899999998  9999999999999999988  6554 34444433

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=94.99  E-value=0.033  Score=54.20  Aligned_cols=45  Identities=16%  Similarity=0.206  Sum_probs=37.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-------------chhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-------------CKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-------------~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |             ++++++++.+++.
T Consensus        10 ~~k~~lVTGas~--GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (277)
T 3tsc_A           10 EGRVAFITGAAR--GQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE   69 (277)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHH
Confidence            346899999998  9999999999999999998  5             5677777766543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=94.97  E-value=0.033  Score=56.23  Aligned_cols=81  Identities=19%  Similarity=0.243  Sum_probs=58.3

Q ss_pred             HHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 009674          341 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  413 (529)
Q Consensus       341 taavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  413 (529)
                      |++.+++-+.     -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+                     ++++
T Consensus       143 Tp~gv~~lL~~~~i~l~Gk~vvVvGrs~--iVG~p~A~lL~~~gAtVtv~h~~t~---------------------~L~~  199 (285)
T 3p2o_A          143 TPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKTK---------------------DLSL  199 (285)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHH
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCch---------------------hHHH
Confidence            5566655543     3578999999997  7999999999999999999  2221                     2332


Q ss_pred             --CcceEEEE--c--CcCChhhhhcCCCCceeecccccCcc
Q 009674          414 --HKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       414 --~~~~vwiv--g--~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                        +++||+|.  |  +.++++..   ++|+++||+. +++.
T Consensus       200 ~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVg-i~~~  236 (285)
T 3p2o_A          200 YTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRL  236 (285)
T ss_dssp             HHTTCSEEEECSSCTTCBCGGGS---CTTEEEEECC-CEEC
T ss_pred             HhhcCCEEEECCCCCCcCCHHHc---CCCeEEEEec-cCcc
Confidence              46677663  3  34666544   9999999998 6664

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=94.96  E-value=0.013  Score=55.01  Aligned_cols=37  Identities=16%  Similarity=0.305  Sum_probs=32.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE  391 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~  391 (529)
                      .+.|+|+|++|  -||+++|+.|.++|.  +|.+  |++++.+
T Consensus        18 ~~~vlVtGasg--~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~   58 (242)
T 2bka_A           18 NKSVFILGASG--ETGRVLLKEILEQGLFSKVTLIGRRKLTFD   58 (242)
T ss_dssp             CCEEEEECTTS--HHHHHHHHHHHHHTCCSEEEEEESSCCCCC
T ss_pred             CCeEEEECCCc--HHHHHHHHHHHcCCCCCEEEEEEcCCCCcc
Confidence            35799999999  999999999999999  8888  7766554

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.92  E-value=0.017  Score=56.96  Aligned_cols=36  Identities=19%  Similarity=0.221  Sum_probs=29.7

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      +-..+|+|+|++|  -||+++++.|.++|.+|..  |+.+
T Consensus        12 ~~~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   49 (335)
T 1rpn_A           12 SMTRSALVTGITG--QDGAYLAKLLLEKGYRVHGLVARRS   49 (335)
T ss_dssp             ---CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             ccCCeEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCCc
Confidence            3567899999999  9999999999999999988  5543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=94.92  E-value=0.018  Score=55.65  Aligned_cols=37  Identities=5%  Similarity=0.029  Sum_probs=31.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHH
Q 009674          355 HVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKL  393 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l  393 (529)
                      +|+|+||||  .||+++++.|.++ |.+|..  |+.++.+.+
T Consensus         2 ~ilVtGatG--~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~   41 (289)
T 3e48_A            2 NIMLTGATG--HLGTHITNQAIANHIDHFHIGVRNVEKVPDD   41 (289)
T ss_dssp             CEEEETTTS--HHHHHHHHHHHHTTCTTEEEEESSGGGSCGG
T ss_pred             EEEEEcCCc--hHHHHHHHHHhhCCCCcEEEEECCHHHHHHh
Confidence            589999999  9999999999987 888887  887765544

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=94.89  E-value=0.0099  Score=59.00  Aligned_cols=112  Identities=8%  Similarity=0.002  Sum_probs=60.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccC--cEEEecchhhHHHHHhhCccccccceeeecccccCcce-EEEEcCcCChh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMG--IKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IWLVGDDLTGK  428 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~--~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-vwivg~~~~~~  428 (529)
                      ...+|+|+||||  -||+++++.|.++|  ++|+.++..+...-.+.           ..++. .+.+ .++.||..+++
T Consensus        23 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~-----------l~~~~-~~~~~~~~~~Dl~d~~   88 (346)
T 4egb_A           23 NAMNILVTGGAG--FIGSNFVHYMLQSYETYKIINFDALTYSGNLNN-----------VKSIQ-DHPNYYFVKGEIQNGE   88 (346)
T ss_dssp             -CEEEEEETTTS--HHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGG-----------GTTTT-TCTTEEEEECCTTCHH
T ss_pred             CCCeEEEECCcc--HHHHHHHHHHHhhCCCcEEEEEeccccccchhh-----------hhhhc-cCCCeEEEEcCCCCHH
Confidence            346899999999  99999999999999  78777322211100000           00000 1122 36788888888


Q ss_pred             hhhcCCCCceeecccccCccCCCCCceeecCCccccCC---CCccccccccccCcchhHHHHHhh
Q 009674          429 EQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPP---SLSNMHSCENWLGRRVMSAWRIAG  490 (529)
Q Consensus       429 ~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~---~~~~~~~~e~~~p~r~~~Ac~a~~  490 (529)
                      +...+-++             .+-|+.++-.+....+.   +.+.+...|..-....+.||...+
T Consensus        89 ~~~~~~~~-------------~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~  140 (346)
T 4egb_A           89 LLEHVIKE-------------RDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP  140 (346)
T ss_dssp             HHHHHHHH-------------HTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST
T ss_pred             HHHHHHhh-------------cCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            77655444             13456655554443321   222222233444556666666554

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=94.89  E-value=0.028  Score=55.26  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=31.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.+
T Consensus         8 ~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~   44 (285)
T 3sc4_A            8 RGKTMFISGGSR--GIGLAIAKRVAADGANVALVAKSAE   44 (285)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECChh
Confidence            356899999998  9999999999999999998  7766

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=94.88  E-value=0.027  Score=54.18  Aligned_cols=39  Identities=10%  Similarity=0.136  Sum_probs=33.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~l--~~~~~~~~l~~  395 (529)
                      +|+|+|+||  -||+++++.|.++  |.+|..  |+.++.+.++.
T Consensus         2 ~ilVtGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~   44 (287)
T 2jl1_A            2 SIAVTGATG--QLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD   44 (287)
T ss_dssp             CEEETTTTS--HHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH
T ss_pred             eEEEEcCCc--hHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh
Confidence            589999999  9999999999988  888887  87777776654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=94.84  E-value=0.044  Score=56.29  Aligned_cols=88  Identities=14%  Similarity=0.205  Sum_probs=62.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cccc--CcceEEE--EcC--
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYAA--HKTKIWL--VGD--  423 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~~~~--~~~~vwi--vg~--  423 (529)
                      ++|+++|+ |  -+|+++++.|.+.|.+|++  |+.++.+.+++......  ..+...  ++.+  +.++++|  +|-  
T Consensus       168 ~~VlViGa-G--gvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~DvVI~~~~~~~  242 (361)
T 1pjc_A          168 GKVVILGG-G--VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRV--ELLYSNSAEIETAVAEADLLIGAVLVPG  242 (361)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGS--EEEECCHHHHHHHHHTCSEEEECCCCTT
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCcee--EeeeCCHHHHHHHHcCCCEEEECCCcCC
Confidence            78999999 8  9999999999999999888  88899988876532211  001111  3332  4567777  321  


Q ss_pred             c-----CChhhhhcCCCCceeecccccCc
Q 009674          424 D-----LTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       424 ~-----~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                      .     ++++....+++|.++++++ .++
T Consensus       243 ~~~~~li~~~~~~~~~~g~~ivdv~-~~~  270 (361)
T 1pjc_A          243 RRAPILVPASLVEQMRTGSVIVDVA-VDQ  270 (361)
T ss_dssp             SSCCCCBCHHHHTTSCTTCEEEETT-CTT
T ss_pred             CCCCeecCHHHHhhCCCCCEEEEEe-cCC
Confidence            1     3566777899999999998 444

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=94.82  E-value=0.022  Score=60.02  Aligned_cols=126  Identities=14%  Similarity=0.191  Sum_probs=82.8

Q ss_pred             HHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc------h-hhHHHHHhhCccccccce
Q 009674          341 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC------K-DDYEKLKLRIPVEAQHNL  405 (529)
Q Consensus       341 taavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~------~-~~~~~l~~~~~~~~~~~l  405 (529)
                      +.|.++|+.+     -...+|++.||-   ..|.+||+.|...|. +|.|  ++      + +++..+|++........ 
T Consensus       171 ~lAall~al~l~g~~l~d~kVVi~GAG---aAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~-  246 (398)
T 2a9f_A          171 VLAAIFNSLKLLKKSLDEVSIVVNGGG---SAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNRE-  246 (398)
T ss_dssp             HHHHHHHHHHTTTCCTTSCEEEEECCS---HHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCT-
T ss_pred             HHHHHHHHHHHhCCCCCccEEEEECCC---HHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcc-
Confidence            3445555443     357799999998   899999999999999 8888  32      1 34666666644432211 


Q ss_pred             eeeccccc--CcceEEE---EcCcCChhhhhcCCCCceeecccc----cCcc---CCCCCceeecCCccccCCCCcccc
Q 009674          406 VLSTSYAA--HKTKIWL---VGDDLTGKEQARAPKGTIFIPYTQ----IPPR---KLRKDCFYHSTPAMIIPPSLSNMH  472 (529)
Q Consensus       406 ~~~~~~~~--~~~~vwi---vg~~~~~~~q~~a~~G~~f~~~~~----~~~~---~~R~dc~y~~~~a~~~P~~~~~~~  472 (529)
                      -+..++++  +.+++.|   .+..+|+|..++|.+|.++.|.|.    ..|+   +. ..|++.++ -...|+..+|.-
T Consensus       247 ~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~~~-g~~i~atG-rs~~p~Q~NN~~  323 (398)
T 2a9f_A          247 FKSGTLEDALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPIPEIYPDEALEA-GAYIVGTG-RSDFPNQINNVL  323 (398)
T ss_dssp             TCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHTT-TCSEEEES-CTTSSSBCCGGG
T ss_pred             cchhhHHHHhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHHHh-CCeEEEeC-CCCCCCcCCcee
Confidence            01236764  6677766   568899999999999999999996    3333   22 33666555 345666666664

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=94.80  E-value=0.037  Score=54.75  Aligned_cols=44  Identities=16%  Similarity=0.341  Sum_probs=36.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~------------~~~~~~l~~~~  397 (529)
                      ..+.|+|+|+++  -||+++|+.|+++|.+|.+  |+            .++++++.+++
T Consensus        27 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (299)
T 3t7c_A           27 EGKVAFITGAAR--GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV   84 (299)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  54            66777766664

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.78  E-value=0.022  Score=56.85  Aligned_cols=33  Identities=15%  Similarity=0.071  Sum_probs=29.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  387 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~  387 (529)
                      .++|+|+||||  .||+++++.|.++|.+|..  |+.
T Consensus        10 ~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~   44 (346)
T 3i6i_A           10 KGRVLIAGATG--FIGQFVATASLDAHRPTYILARPG   44 (346)
T ss_dssp             -CCEEEECTTS--HHHHHHHHHHHHTTCCEEEEECSS
T ss_pred             CCeEEEECCCc--HHHHHHHHHHHHCCCCEEEEECCC
Confidence            45799999999  9999999999999988888  655

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=94.78  E-value=0.024  Score=54.42  Aligned_cols=40  Identities=15%  Similarity=0.096  Sum_probs=35.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++
T Consensus         2 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   43 (254)
T 1zmt_A            2 STAIVTNVKH--FGGMGSALRLSEAGHTVACHDESFKQKDELEA   43 (254)
T ss_dssp             CEEEESSTTS--TTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH
T ss_pred             eEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            4689999998  9999999999999999998  88887777654

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=94.77  E-value=0.073  Score=53.66  Aligned_cols=90  Identities=19%  Similarity=0.217  Sum_probs=62.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeee-ccccc-CcceEEE--EcCcCC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLS-TSYAA-HKTKIWL--VGDDLT  426 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~-~~~~~-~~~~vwi--vg~~~~  426 (529)
                      .++|.++|+-   -+|+.+|+.|+ .|.+|++  ++++..+++++.+..+.-.. +.. +++++ ++++++|  +-+..+
T Consensus        12 ~~~V~vIG~G---~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~-i~~~~~~~~~~~aDlVieavpe~~~   86 (293)
T 1zej_A           12 HMKVFVIGAG---LMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSK-IEFTTTLEKVKDCDIVMEAVFEDLN   86 (293)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGG-EEEESSCTTGGGCSEEEECCCSCHH
T ss_pred             CCeEEEEeeC---HHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCC-eEEeCCHHHHcCCCEEEEcCcCCHH
Confidence            5789999985   99999999999 9999999  88899998887742222122 323 36766 7888777  322221


Q ss_pred             hh-----hhhcCCCCceee-cccccCcc
Q 009674          427 GK-----EQARAPKGTIFI-PYTQIPPR  448 (529)
Q Consensus       427 ~~-----~q~~a~~G~~f~-~~~~~~~~  448 (529)
                      -+     +...+ +|++++ ..|-+++.
T Consensus        87 vk~~l~~~l~~~-~~~IlasntSti~~~  113 (293)
T 1zej_A           87 TKVEVLREVERL-TNAPLCSNTSVISVD  113 (293)
T ss_dssp             HHHHHHHHHHTT-CCSCEEECCSSSCHH
T ss_pred             HHHHHHHHHhcC-CCCEEEEECCCcCHH
Confidence            11     23456 898885 66667777

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=94.77  E-value=0.034  Score=54.19  Aligned_cols=36  Identities=17%  Similarity=0.198  Sum_probs=31.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         5 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~   42 (274)
T 3e03_A            5 SGKTLFITGASR--GIGLAIALRAARDGANVAIAAKSAVA   42 (274)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCCSC
T ss_pred             CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeccchh
Confidence            356899999998  9999999999999999998  77654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.75  E-value=0.027  Score=52.85  Aligned_cols=41  Identities=12%  Similarity=0.118  Sum_probs=36.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~~~~~l~~~  396 (529)
                      +.|+++|++|  -||+++|+.|.++|  .+|.+  |+.++.+++++.
T Consensus         4 k~vlItGasg--giG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~   48 (250)
T 1yo6_A            4 GSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI   48 (250)
T ss_dssp             SEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC
T ss_pred             CEEEEecCCc--hHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc
Confidence            5799999998  99999999999999  89988  888888888654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=94.73  E-value=0.016  Score=56.49  Aligned_cols=40  Identities=15%  Similarity=0.258  Sum_probs=35.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.
T Consensus        16 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   57 (266)
T 3p19_A           16 KKLVVITGASS--GIGEAIARRFSEEGHPLLLLARRVERLKALN   57 (266)
T ss_dssp             CCEEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCHHHHHTTC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHhh
Confidence            56899999998  9999999999999999999  8887776553

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.73  E-value=0.033  Score=56.26  Aligned_cols=82  Identities=20%  Similarity=0.221  Sum_probs=58.4

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 009674          340 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  412 (529)
Q Consensus       340 ltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~  412 (529)
                      -|++.+++-+.     -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+                     +++
T Consensus       143 cTp~gv~~lL~~~~i~l~Gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L~  199 (285)
T 3l07_A          143 CTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFTT---------------------DLK  199 (285)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------SHH
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCch---------------------hHH
Confidence            35555555443     3578999999997  7999999999999999999  2211                     333


Q ss_pred             c--CcceEEEE--c--CcCChhhhhcCCCCceeecccccCcc
Q 009674          413 A--HKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       413 ~--~~~~vwiv--g--~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      +  +++||+|.  |  +.++++..   ++|+++||+. +++.
T Consensus       200 ~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvg-i~~~  237 (285)
T 3l07_A          200 SHTTKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHV  237 (285)
T ss_dssp             HHHTTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-CEEE
T ss_pred             HhcccCCEEEECCCCCCCCCHHHc---CCCcEEEEec-ccCc
Confidence            2  46677663  3  34666544   9999999999 6664

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=94.71  E-value=0.021  Score=54.45  Aligned_cols=40  Identities=20%  Similarity=0.345  Sum_probs=35.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+++++++++
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   47 (246)
T 2ag5_A            6 GKVIILTAAAQ--GIGQAAALAFAREGAKVIATDINESKLQELE   47 (246)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHGGGG
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            46799999998  9999999999999999998  8887777665

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=94.67  E-value=0.029  Score=56.08  Aligned_cols=46  Identities=17%  Similarity=0.185  Sum_probs=38.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~----------~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+          .++.+++.+++..
T Consensus        26 ~gk~vlVTGas~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~   83 (322)
T 3qlj_A           26 DGRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA   83 (322)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh
Confidence            356799999998  9999999999999999998  65          6777777777543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=94.67  E-value=0.027  Score=54.04  Aligned_cols=44  Identities=20%  Similarity=0.228  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc---cCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQ---MGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~---~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|++   +|.+|.+  |++++++++.+++.
T Consensus         6 ~k~~lVTGas~--gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~   54 (259)
T 1oaa_A            6 CAVCVLTGASR--GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELG   54 (259)
T ss_dssp             SEEEEESSCSS--HHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCC--hHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHH
Confidence            46789999998  999999999998   8999998  89899988887764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=94.66  E-value=0.041  Score=54.39  Aligned_cols=44  Identities=16%  Similarity=0.293  Sum_probs=34.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ..+.|+|+|++|+.-||+++|+.|+++|.+|.+  |+++..+.+++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~   74 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDP   74 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence            356899999985347999999999999999998  66654444433

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.60  E-value=0.03  Score=53.88  Aligned_cols=43  Identities=21%  Similarity=0.306  Sum_probs=36.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++ +++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~   50 (256)
T 2d1y_A            6 GKGVLVTGGAR--GIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG   50 (256)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh
Confidence            46799999998  9999999999999999988  77777 77766653

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.59  E-value=0.033  Score=54.21  Aligned_cols=36  Identities=22%  Similarity=0.199  Sum_probs=30.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDY  390 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~  390 (529)
                      .+.|+|+||||  .||+++++.|.++| .+|..  |+.++.
T Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~~V~~~~R~~~~~   43 (299)
T 2wm3_A            5 KKLVVVFGGTG--AQGGSVARTLLEDGTFKVRVVTRNPRKK   43 (299)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHHCSSEEEEEESCTTSH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHhcCCceEEEEEcCCCCH
Confidence            36799999999  99999999999988 88877  766543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=94.59  E-value=0.089  Score=53.97  Aligned_cols=67  Identities=16%  Similarity=0.263  Sum_probs=47.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccc----cccceeeeccccc-CcceEEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE----AQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~----~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      ...+|.++|| |  .||+++|..|+.+|.  .+.|  +++++.+....++...    ....++..+++++ ++++++|+
T Consensus        18 ~~~kV~ViGa-G--~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~~~aDiVvi   93 (331)
T 4aj2_A           18 PQNKITVVGV-G--AVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVII   93 (331)
T ss_dssp             CSSEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGGGTTEEEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence            4568999998 7  999999999998887  7777  6777777644443321    1122223347877 89998776

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=94.56  E-value=0.036  Score=55.90  Aligned_cols=44  Identities=16%  Similarity=0.170  Sum_probs=36.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe-------cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-------ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-------~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|..       |++++++++++++.
T Consensus         5 ~k~vlVTGas~--GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~   55 (324)
T 3u9l_A            5 KKIILITGASS--GFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFAR   55 (324)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999984       45777887776643

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=94.56  E-value=0.051  Score=55.30  Aligned_cols=85  Identities=16%  Similarity=0.180  Sum_probs=60.1

Q ss_pred             hhHHHHHHhcCcC-----CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc
Q 009674          339 SLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA  413 (529)
Q Consensus       339 sltaavv~~~i~~-----~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  413 (529)
                      .-|+..+++-+..     ..++|+|+|+.+  -||+-+|+.|.++|-.|++-+. +                  ..++++
T Consensus       146 PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~hs-~------------------t~~L~~  204 (301)
T 1a4i_A          146 PCTPKGCLELIKETGVPIAGRHAVVVGRSK--IVGAPMHDLLLWNNATVTTCHS-K------------------TAHLDE  204 (301)
T ss_dssp             CHHHHHHHHHHHTTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECT-T------------------CSSHHH
T ss_pred             CchHHHHHHHHHHcCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCeEEEEEC-C------------------cccHHH
Confidence            3477777776543     578999999996  7999999999999999999110 0                  113332


Q ss_pred             --CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc
Q 009674          414 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       414 --~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                        +.++++|  +|  +.++++..   ++|+++||++ +++.
T Consensus       205 ~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVg-i~~~  241 (301)
T 1a4i_A          205 EVNKGDILVVATGQPEMVKGEWI---KPGAIVIDCG-INYV  241 (301)
T ss_dssp             HHTTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-CBC-
T ss_pred             HhccCCEEEECCCCcccCCHHHc---CCCcEEEEcc-CCCc
Confidence              4666766  22  24565554   8999999999 7663

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=94.55  E-value=0.038  Score=53.90  Aligned_cols=46  Identities=22%  Similarity=0.382  Sum_probs=37.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~--~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|++-||+++|+.|+++|.+|.+  |++  +.+++++++.+
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~   75 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFN   75 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcC
Confidence            56899999996224999999999999999998  666  67777766643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.55  E-value=0.055  Score=53.14  Aligned_cols=81  Identities=15%  Similarity=0.240  Sum_probs=55.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc--CcCCh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG--DDLTG  427 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg--~~~~~  427 (529)
                      .+|.++|+||  .+|+++|+.|.+.|.+|.+  |++++.+.+++. +       +..++.++  ++++++|+-  .....
T Consensus        12 m~I~iIG~tG--~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g-------~~~~~~~~~~~~aDvVi~av~~~~~~   81 (286)
T 3c24_A           12 KTVAILGAGG--KMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM-G-------IPLTDGDGWIDEADVVVLALPDNIIE   81 (286)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT-T-------CCCCCSSGGGGTCSEEEECSCHHHHH
T ss_pred             CEEEEECCCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-C-------CCcCCHHHHhcCCCEEEEcCCchHHH
Confidence            4799999999  9999999999999999988  888888888762 1       11233433  567776631  11000


Q ss_pred             ---hhh-hcCCCCceeecccc
Q 009674          428 ---KEQ-ARAPKGTIFIPYTQ  444 (529)
Q Consensus       428 ---~~q-~~a~~G~~f~~~~~  444 (529)
                         ++. ..+++|+++++.|-
T Consensus        82 ~v~~~l~~~l~~~~ivv~~s~  102 (286)
T 3c24_A           82 KVAEDIVPRVRPGTIVLILDA  102 (286)
T ss_dssp             HHHHHHGGGSCTTCEEEESCS
T ss_pred             HHHHHHHHhCCCCCEEEECCC
Confidence               122 23578999998776

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=94.53  E-value=0.042  Score=57.34  Aligned_cols=89  Identities=17%  Similarity=0.187  Sum_probs=59.6

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec-
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-  422 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-  422 (529)
                      ...++|+++|+ |  .+|+++++.|...|. +|++  |+.++.+++.++++.+.    +...++++  +.++++|  +| 
T Consensus       165 l~g~~VlIiGa-G--~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          165 LHDKTVLVVGA-G--EMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA----VRFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CTTCEEEEESC-C--HHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE----CCGGGHHHHHHTCSEEEECCSS
T ss_pred             ccCCEEEEECh-H--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce----ecHHhHHHHhcCCCEEEEccCC
Confidence            35678999998 7  999999999999998 8888  88888877877654321    11224443  4667766  22 


Q ss_pred             -Cc-CChhhhhc-C-----CCCceeecccccCc
Q 009674          423 -DD-LTGKEQAR-A-----PKGTIFIPYTQIPP  447 (529)
Q Consensus       423 -~~-~~~~~q~~-a-----~~G~~f~~~~~~~~  447 (529)
                       .. ++.+.... +     .++.++++.+ .|+
T Consensus       238 ~~~~~~~~~l~~~~lk~r~~~~~v~vdia-~P~  269 (404)
T 1gpj_A          238 PHPVIHVDDVREALRKRDRRSPILIIDIA-NPR  269 (404)
T ss_dssp             SSCCBCHHHHHHHHHHCSSCCCEEEEECC-SSC
T ss_pred             CCceecHHHHHHHHHhccCCCCEEEEEcc-CCC
Confidence             22 23344433 2     4678888888 344

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=94.52  E-value=0.061  Score=51.81  Aligned_cols=43  Identities=26%  Similarity=0.324  Sum_probs=34.4

Q ss_pred             CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 009674          353 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~  397 (529)
                      .+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+++   ..++++++.
T Consensus         8 ~k~vlVTGas~~~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   57 (261)
T 2wyu_A            8 GKKALVMGVTNQR--SLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL   57 (261)
T ss_dssp             TCEEEEESCCSSS--SHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--cHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc
Confidence            4679999999  6  8999999999999999988  6654   455555443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=94.51  E-value=0.01  Score=59.98  Aligned_cols=108  Identities=11%  Similarity=0.021  Sum_probs=61.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-----HHHHHhhCccccccceeeecccccCcc-eE-EEEcCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-----YEKLKLRIPVEAQHNLVLSTSYAAHKT-KI-WLVGDD  424 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~-----~~~l~~~~~~~~~~~l~~~~~~~~~~~-~v-wivg~~  424 (529)
                      +.|+|+|++|  -||+++|+.|.++|.+|..  |+.++     ++.+.++              .++... ++ ++.+|.
T Consensus        29 k~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~Dl   92 (381)
T 1n7h_A           29 KIALITGITG--QDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYID--------------PHNVNKALMKLHYADL   92 (381)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------------------CCEEEEECCT
T ss_pred             CeEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhc--------------cccccccceEEEECCC
Confidence            6799999999  9999999999999999988  55433     1111100              000011 23 677888


Q ss_pred             CChhhhhcCCCCceeecccccCccCCCCCceeecCCccccC---CCCccccccccccCcchhHHHHHhh
Q 009674          425 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIP---PSLSNMHSCENWLGRRVMSAWRIAG  490 (529)
Q Consensus       425 ~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P---~~~~~~~~~e~~~p~r~~~Ac~a~~  490 (529)
                      .++++...+-++.             +-|++++..+....+   ++.+.+...|..-+...+.||...+
T Consensus        93 ~d~~~~~~~~~~~-------------~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~  148 (381)
T 1n7h_A           93 TDASSLRRWIDVI-------------KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT  148 (381)
T ss_dssp             TCHHHHHHHHHHH-------------CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhc-------------CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            7777665443331             346666655543321   1222222234445566677766543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=94.48  E-value=0.033  Score=50.97  Aligned_cols=41  Identities=17%  Similarity=0.176  Sum_probs=35.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      +.|+++|++|  -||+++|+.|+++  +|.+  |++++.++++++++
T Consensus         1 k~vlVtGasg--~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~   43 (207)
T 2yut_A            1 MRVLITGATG--GLGGAFARALKGH--DLLLSGRRAGALAELAREVG   43 (207)
T ss_dssp             CEEEEETTTS--HHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc
Confidence            3689999998  9999999999988  7777  88889888877654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=94.47  E-value=0.018  Score=56.92  Aligned_cols=38  Identities=26%  Similarity=0.215  Sum_probs=30.6

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      |+..++|+|+|++|  -||+++++.|.++|.+|..  |+.++
T Consensus         6 ~~~~~~vlVTGatG--fIG~~l~~~Ll~~G~~V~~~~r~~~~   45 (338)
T 2rh8_A            6 PIGKKTACVVGGTG--FVASLLVKLLLQKGYAVNTTVRDPDN   45 (338)
T ss_dssp             ---CCEEEEECTTS--HHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCcch
Confidence            44456899999999  9999999999999999875  66553

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=94.47  E-value=0.042  Score=52.66  Aligned_cols=39  Identities=13%  Similarity=0.190  Sum_probs=33.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~l--~~~~~~~~l~~  395 (529)
                      +|+|+||||  -||+++++.|.++  |.+|..  |+.++.+.+++
T Consensus         1 ~ilVtGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~   43 (286)
T 2zcu_A            1 MIAITGATG--QLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA   43 (286)
T ss_dssp             CEEEESTTS--HHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH
T ss_pred             CEEEEcCCc--hHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc
Confidence            489999999  9999999999988  888887  77777766654

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=94.46  E-value=0.019  Score=56.59  Aligned_cols=57  Identities=21%  Similarity=0.243  Sum_probs=42.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL  420 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi  420 (529)
                      +|+++|+ |  ..|+|++..|.+.|. +|.+  |+.++.++|++++...      ...++++  ++++++|
T Consensus       110 ~vliiGa-G--g~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~------~~~~~~~~~~~aDiVI  171 (253)
T 3u62_A          110 PVVVVGA-G--GAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIF------SLDQLDEVVKKAKSLF  171 (253)
T ss_dssp             SEEEECC-S--HHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEE------EGGGHHHHHHTCSEEE
T ss_pred             eEEEECc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccC------CHHHHHhhhcCCCEEE
Confidence            8999998 5  799999999999998 7887  8888888777664321      1224433  5667777

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=94.45  E-value=0.041  Score=56.25  Aligned_cols=36  Identities=14%  Similarity=0.253  Sum_probs=32.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus        44 ~gk~vlVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~   81 (346)
T 3kvo_A           44 AGCTVFITGASR--GIGKAIALKAAKDGANIVIAAKTAQP   81 (346)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred             CCCEEEEeCCCh--HHHHHHHHHHHHCCCEEEEEECChhh
Confidence            457899999998  9999999999999999999  77664

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=94.44  E-value=0.044  Score=53.50  Aligned_cols=44  Identities=20%  Similarity=0.210  Sum_probs=35.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh-hHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD-DYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~-~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.+ ..+++++++
T Consensus        28 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   74 (283)
T 1g0o_A           28 EGKVALVTGAGR--GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI   74 (283)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH
Confidence            356899999998  9999999999999999988  6654 355554443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=94.43  E-value=0.014  Score=59.78  Aligned_cols=91  Identities=16%  Similarity=0.170  Sum_probs=56.3

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecc---ccc--CcceEEE-
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS---YAA--HKTKIWL-  420 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~---~~~--~~~~vwi-  420 (529)
                      ++..+.+|+|.|| |  .||+.+|++|++. .+|.+  ++.++++++++....-.    +.+++   +++  ++++++| 
T Consensus        12 ~~g~~mkilvlGa-G--~vG~~~~~~L~~~-~~v~~~~~~~~~~~~~~~~~~~~~----~d~~d~~~l~~~~~~~DvVi~   83 (365)
T 3abi_A           12 IEGRHMKVLILGA-G--NIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLK----VDASNFDKLVEVMKEFELVIG   83 (365)
T ss_dssp             ----CCEEEEECC-S--HHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEE----CCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccCCccEEEEECC-C--HHHHHHHHHHhcC-CCeEEEEcCHHHHHHHhccCCcEE----EecCCHHHHHHHHhCCCEEEE
Confidence            4445678999999 8  9999999999854 57777  89999998876543211    23443   333  6777777 


Q ss_pred             -EcCcCChhh-hhcCCCCceeecccccCc
Q 009674          421 -VGDDLTGKE-QARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       421 -vg~~~~~~~-q~~a~~G~~f~~~~~~~~  447 (529)
                       +|-.....= ..-+..|++++|.|-.++
T Consensus        84 ~~p~~~~~~v~~~~~~~g~~yvD~s~~~~  112 (365)
T 3abi_A           84 ALPGFLGFKSIKAAIKSKVDMVDVSFMPE  112 (365)
T ss_dssp             CCCGGGHHHHHHHHHHHTCEEEECCCCSS
T ss_pred             ecCCcccchHHHHHHhcCcceEeeeccch
Confidence             322221110 112356899999884433

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=94.43  E-value=0.034  Score=56.09  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=38.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |++++++++++++.
T Consensus        46 ~k~~lVTGas~--GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~   92 (328)
T 2qhx_A           46 VPVALVTGAAK--RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN   92 (328)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999987   77888888877654

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=94.41  E-value=0.033  Score=57.63  Aligned_cols=84  Identities=10%  Similarity=0.082  Sum_probs=59.2

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-----
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----  421 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----  421 (529)
                      -..++|.++|.-   .||+++|+.|...|.+|+.  |+....+..++ .+..      .+.++++  ++++++++     
T Consensus       162 l~gktvGIIG~G---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~------~~~~l~ell~~aDvV~l~~Plt  231 (351)
T 3jtm_A          162 LEGKTIGTVGAG---RIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-TGAK------FVEDLNEMLPKCDVIVINMPLT  231 (351)
T ss_dssp             STTCEEEEECCS---HHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-HCCE------ECSCHHHHGGGCSEEEECSCCC
T ss_pred             ccCCEEeEEEeC---HHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-CCCe------EcCCHHHHHhcCCEEEECCCCC
Confidence            346789999965   9999999999999999888  44333333222 1211      1335554  56777552     


Q ss_pred             ---cCcCChhhhhcCCCCceeecccc
Q 009674          422 ---GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 ---g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                         -..++.+....|++|+++|..+|
T Consensus       232 ~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          232 EKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             TTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             HHHHHhhcHHHHhcCCCCCEEEECcC
Confidence               12567888899999999999998

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=94.40  E-value=0.035  Score=54.64  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |++++++++++++.
T Consensus         9 ~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~   55 (291)
T 1e7w_A            9 VPVALVTGAAK--RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN   55 (291)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHh
Confidence            46799999998  9999999999999999988   77788888777654

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.39  E-value=0.081  Score=52.51  Aligned_cols=101  Identities=15%  Similarity=0.091  Sum_probs=67.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceee-eccccc--CcceEEE--EcCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL-STSYAA--HKTKIWL--VGDD  424 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~-~~~~~~--~~~~vwi--vg~~  424 (529)
                      ...+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.+++.-   .    .. .+++++  ++++++|  +.+.
T Consensus         6 ~~~~I~iIG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g---~----~~~~~~~~e~~~~aDvvi~~vp~~   75 (303)
T 3g0o_A            6 TDFHVGIVGL-G--SMGMGAARSCLRAGLSTWGADLNPQACANLLAEG---A----CGAAASAREFAGVVDALVILVVNA   75 (303)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT---C----SEEESSSTTTTTTCSEEEECCSSH
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC---C----ccccCCHHHHHhcCCEEEEECCCH
Confidence            3468999996 4  9999999999999999999  8899999887651   0    11 336654  6777755  2221


Q ss_pred             --CCh-----hh-hhcCCCCceeecccccCcc---C----C-CCCceeecCCcc
Q 009674          425 --LTG-----KE-QARAPKGTIFIPYTQIPPR---K----L-RKDCFYHSTPAM  462 (529)
Q Consensus       425 --~~~-----~~-q~~a~~G~~f~~~~~~~~~---~----~-R~dc~y~~~~a~  462 (529)
                        ++.     ++ ...+++|+++++.|.++|.   +    + ++.+.|...|.+
T Consensus        76 ~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~  129 (303)
T 3g0o_A           76 AQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVS  129 (303)
T ss_dssp             HHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEE
T ss_pred             HHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCC
Confidence              111     11 1246899999999988775   1    1 135666665554

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=94.39  E-value=0.049  Score=54.43  Aligned_cols=44  Identities=14%  Similarity=0.288  Sum_probs=35.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~------------~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++.+++
T Consensus        45 ~gk~~lVTGas~--GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (317)
T 3oec_A           45 QGKVAFITGAAR--GQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV  102 (317)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  43            56666665553

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=94.38  E-value=0.1  Score=52.78  Aligned_cols=133  Identities=20%  Similarity=0.218  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHcCCcEEEecc---------cccccccccCC---ceeeec-CCCCcc----------eeeecCCh------
Q 009674          289 IEEAILEADAKGVKVISLGL---------LNQGEELNRNG---EIYLER-QPNKLK----------IKVVDGSS------  339 (529)
Q Consensus       289 I~~Ai~~A~k~G~kv~~LG~---------ln~~e~ln~~g---~~~~~k-~p~~L~----------irvv~Gns------  339 (529)
                      +..-.+.|++.|++..-.-+         ++.+++||.|-   ++.++. .|++++          .+=|||=+      
T Consensus        53 v~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~g~  132 (286)
T 4a5o_A           53 VAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGR  132 (286)
T ss_dssp             HHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGGGCTTCCSHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcccccccCChhhhHH
Confidence            44556778888887765432         23335677762   244432 122222          13334432      


Q ss_pred             ----------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 009674          340 ----------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  402 (529)
Q Consensus       340 ----------ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~  402 (529)
                                -|+..+++-+     +-.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+              
T Consensus       133 l~~g~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~--iVG~plA~lL~~~gAtVtv~hs~T~--------------  196 (286)
T 4a5o_A          133 LAQRMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASN--IVGRPMALELLLGGCTVTVTHRFTR--------------  196 (286)
T ss_dssp             HHTTCCSSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTS--TTHHHHHHHHHHTTCEEEEECTTCS--------------
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCCc--------------
Confidence                      2455555444     33578999999997  8999999999999999999  2222              


Q ss_pred             cceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc
Q 009674          403 HNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       403 ~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                             ++++  ++++|+|  +|  +.++++..   ++|+++||+. +++.
T Consensus       197 -------~L~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvg-i~~~  237 (286)
T 4a5o_A          197 -------DLADHVSRADLVVVAAGKPGLVKGEWI---KEGAIVIDVG-INRQ  237 (286)
T ss_dssp             -------CHHHHHHTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-SCSS
T ss_pred             -------CHHHHhccCCEEEECCCCCCCCCHHHc---CCCeEEEEec-cccc
Confidence                   2222  3566766  33  34565544   9999999999 6664

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=94.37  E-value=0.039  Score=52.90  Aligned_cols=34  Identities=15%  Similarity=0.304  Sum_probs=30.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         4 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~   39 (255)
T 2q2v_A            4 GKTALVTGSTS--GIGLGIAQVLARAGANIVLNGFGDP   39 (255)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCch
Confidence            36799999998  9999999999999999988  6554

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=94.37  E-value=0.024  Score=56.71  Aligned_cols=102  Identities=18%  Similarity=0.103  Sum_probs=69.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec----
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG----  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg----  422 (529)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.++++++ +.      ...++.++  ++++++|  +.    
T Consensus         9 ~~~IgiIG~-G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~------~~~~~~~e~~~~aDvVi~~vp~~~~   78 (306)
T 3l6d_A            9 EFDVSVIGL-G--AMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-GA------HLCESVKAALSASPATIFVLLDNHA   78 (306)
T ss_dssp             SCSEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-TC------EECSSHHHHHHHSSEEEECCSSHHH
T ss_pred             CCeEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CC------eecCCHHHHHhcCCEEEEEeCCHHH
Confidence            457999996 5  9999999999999999999  889999988765 11      11235553  5666655  21    


Q ss_pred             --CcCChhhhhcCCCCceeecccccCcc---C----CC-CCceeecCCcccc
Q 009674          423 --DDLTGKEQARAPKGTIFIPYTQIPPR---K----LR-KDCFYHSTPAMII  464 (529)
Q Consensus       423 --~~~~~~~q~~a~~G~~f~~~~~~~~~---~----~R-~dc~y~~~~a~~~  464 (529)
                        +.+.++++..+++|+++++.+.++|.   +    ++ +.+.|.+.|.+--
T Consensus        79 ~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~  130 (306)
T 3l6d_A           79 THEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAY  130 (306)
T ss_dssp             HHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESC
T ss_pred             HHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccC
Confidence              12221133445899999999998887   1    12 4667777666543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=94.37  E-value=0.039  Score=54.49  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=35.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~--~~~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+  +++.+++++++
T Consensus        48 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~   95 (294)
T 3r3s_A           48 KDRKALVTGGDS--GIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALI   95 (294)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHH
Confidence            356899999998  9999999999999999988  43  44566665553

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=94.36  E-value=0.053  Score=54.65  Aligned_cols=133  Identities=22%  Similarity=0.239  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHcCCcEEEecc---------cccccccccCC---ceeeecC-CCCcce----------eeecCC-------
Q 009674          289 IEEAILEADAKGVKVISLGL---------LNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS-------  338 (529)
Q Consensus       289 I~~Ai~~A~k~G~kv~~LG~---------ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn-------  338 (529)
                      +.+-.+.|++.|++..-.=+         ++.+++||.|-   ++.++.= |++++.          |=|||=       
T Consensus        50 v~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~  129 (281)
T 2c2x_A           50 VRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGR  129 (281)
T ss_dssp             HHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHH
Confidence            44556778889988765422         23346677773   3555531 333331          123332       


Q ss_pred             ---------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhhCccc
Q 009674          339 ---------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       339 ---------sltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~--~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                               .-|+..+++-+.     -..++|+|+|+..  -||+-+|+.|.++  |-.|++  ++.+            
T Consensus       130 l~~g~~~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~--iVG~p~A~lL~~~g~~atVtv~h~~t~------------  195 (281)
T 2c2x_A          130 LVLGTPAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGV--TVGRPLGLLLTRRSENATVTLCHTGTR------------  195 (281)
T ss_dssp             HHHTCCCCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHTSTTTCCEEEEECTTCS------------
T ss_pred             HhCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEECCCc--HHHHHHHHHHhcCCCCCEEEEEECchh------------
Confidence                     236666655543     3578999999985  6799999999999  899999  2221            


Q ss_pred             cccceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc
Q 009674          401 AQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       401 ~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                               ++++  +++|++|  +|  +.++++..   ++|+++||++ +|+.
T Consensus       196 ---------~L~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVg-i~r~  236 (281)
T 2c2x_A          196 ---------DLPALTRQADIVVAAVGVAHLLTADMV---RPGAAVIDVG-VSRT  236 (281)
T ss_dssp             ---------CHHHHHTTCSEEEECSCCTTCBCGGGS---CTTCEEEECC-EEEE
T ss_pred             ---------HHHHHHhhCCEEEECCCCCcccCHHHc---CCCcEEEEcc-CCCC
Confidence                     2332  4566766  22  24666655   8999999999 7763

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=94.32  E-value=0.076  Score=53.10  Aligned_cols=97  Identities=11%  Similarity=0.005  Sum_probs=60.2

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCCCcc-ee----eecCChhHHHHHH-hcC-cCCCcEEEEecccCchhhHHH
Q 009674          298 AKGVKVISLGLLNQGEELNRNGEIYLERQPNKLK-IK----VVDGSSLAAAVVV-NSL-PKTTAHVLLRGTVTANKVANA  370 (529)
Q Consensus       298 k~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~-ir----vv~Gnsltaavv~-~~i-~~~~~~V~~~Gatg~~kig~a  370 (529)
                      |-|=+|++.|++.+--.+  .. -.+.+-|+++. ..    ...-+-.||+-.+ +.. .+..+.|+++|++|  -||.+
T Consensus        91 ~vGdrV~~~G~~aey~~v--~~-~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g--~iG~~  165 (336)
T 4b7c_A           91 QAGDYVNGALGVQDYFIG--EP-KGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAG--AVGSV  165 (336)
T ss_dssp             CTTCEEEEECCSBSEEEE--CC-TTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTS--HHHHH
T ss_pred             CCCCEEeccCCceEEEEe--ch-HHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHH
Confidence            346667777877652111  11 12334443231 11    1111224555555 222 23567899999998  99999


Q ss_pred             HHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          371 VASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       371 va~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +++.+...|.+|..  +++++++.++++++.
T Consensus       166 ~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~  196 (336)
T 4b7c_A          166 AGQIARLKGCRVVGIAGGAEKCRFLVEELGF  196 (336)
T ss_dssp             HHHHHHHTTCEEEEEESSHHHHHHHHHTTCC
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence            99999999999988  889999988666654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=94.29  E-value=0.043  Score=54.25  Aligned_cols=38  Identities=16%  Similarity=0.170  Sum_probs=31.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  393 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l  393 (529)
                      +.|+|+|++|  -||+++++.|.++|.+|..  |+.+..+++
T Consensus         6 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~   45 (337)
T 2c29_D            6 ETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPTNVKKV   45 (337)
T ss_dssp             CEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCTTCHHHH
T ss_pred             CEEEEECCch--HHHHHHHHHHHHCCCEEEEEECCcchhHHH
Confidence            5799999999  9999999999999999875  776644333

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=94.24  E-value=0.047  Score=53.74  Aligned_cols=38  Identities=11%  Similarity=0.151  Sum_probs=32.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  393 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l  393 (529)
                      .+|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.+
T Consensus        14 M~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l   53 (342)
T 2x4g_A           14 VKYAVLGATG--LLGHHAARAIRAAGHDLVLIHRPSSQIQRL   53 (342)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECTTSCGGGG
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEecChHhhhhh
Confidence            3799999999  9999999999999999988  766655433

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=94.19  E-value=0.043  Score=47.75  Aligned_cols=41  Identities=20%  Similarity=0.225  Sum_probs=36.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      .++|+++|+ |  .+|+++|+.|.++|.+|++  +++++.+.++++
T Consensus         6 ~~~v~I~G~-G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~   48 (141)
T 3llv_A            6 RYEYIVIGS-E--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE   48 (141)
T ss_dssp             CCSEEEECC-S--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC
Confidence            357999998 6  9999999999999999999  888888888754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=94.16  E-value=0.046  Score=52.52  Aligned_cols=38  Identities=24%  Similarity=0.243  Sum_probs=32.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++..+
T Consensus        18 ~~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~   57 (249)
T 1o5i_A           18 RDKGVLVLAASR--GIGRAVADVLSQEGAEVTICARNEELLK   57 (249)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence            467899999998  9999999999999999998  7664444

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=94.13  E-value=0.09  Score=53.35  Aligned_cols=136  Identities=13%  Similarity=0.049  Sum_probs=83.6

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  369 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~  369 (529)
                      .|+|+++-.  ..    |-.| ..+.-+|+ +.-.-+.||+.+|+       |+..+-+ +++.++|.++|+-   .+|+
T Consensus        65 ~g~K~~~~~--p~----n~~~-~v~L~d~~tG~p~a~ld~~~lT~~RTaA~s~laa~~La~~~~~~v~iIGaG---~~a~  134 (313)
T 3hdj_A           65 AGAKVYTTI--KG----QFQF-VILLFSAADGRPLATCDAGTLTRKRTAACTVLAAGALARPRSSVLGLFGAG---TQGA  134 (313)
T ss_dssp             EEEEEEEEE--TT----EEEE-EEEEEETTTCCEEEEECSHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---HHHH
T ss_pred             eEEEEeecC--CC----CceE-EEEEEECCCCCEEEEEcCchhhhHHHHHHHHHHHHhhccCCCcEEEEECcc---HHHH
Confidence            477776632  11    2233 44444443 35588999999985       3333333 6688899999965   9999


Q ss_pred             HHHHHHhc-c-CcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----cC-cCChhhhhcCCCCceee
Q 009674          370 AVASSLCQ-M-GIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD-DLTGKEQARAPKGTIFI  440 (529)
Q Consensus       370 ava~~L~~-~-~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~-~~~~~~q~~a~~G~~f~  440 (529)
                      ..+++|++ + ..+|.+.|+.+-+++.+++..+.+.. +...++++  ++++|++.    ++ .++.   .+.++|++++
T Consensus       135 ~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~-~~~~~~~eav~~aDIVi~aT~s~~pvl~~---~~l~~G~~V~  210 (313)
T 3hdj_A          135 EHAAQLSARFALEAILVHDPYASPEILERIGRRCGVP-ARMAAPADIAAQADIVVTATRSTTPLFAG---QALRAGAFVG  210 (313)
T ss_dssp             HHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSC-EEECCHHHHHHHCSEEEECCCCSSCSSCG---GGCCTTCEEE
T ss_pred             HHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCe-EEEeCHHHHHhhCCEEEEccCCCCcccCH---HHcCCCcEEE
Confidence            99999984 3 45666622227777777654433322 21226664  67888772    22 2332   3568999999


Q ss_pred             cccccCcc
Q 009674          441 PYTQIPPR  448 (529)
Q Consensus       441 ~~~~~~~~  448 (529)
                      ++.-..|.
T Consensus       211 ~vGs~~p~  218 (313)
T 3hdj_A          211 AIGSSLPH  218 (313)
T ss_dssp             ECCCSSTT
T ss_pred             ECCCCCCc
Confidence            98754443

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=94.10  E-value=0.085  Score=55.23  Aligned_cols=85  Identities=16%  Similarity=0.203  Sum_probs=60.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeee--------------c-------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLS--------------T-------  409 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~--------------~-------  409 (529)
                      .++|+++|+ |  .||.++++.+...|.+|++  ++.++++.+++ ++...-.  +..              +       
T Consensus       172 g~~V~ViGa-G--~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~-lGa~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~  245 (401)
T 1x13_A          172 PAKVMVIGA-G--VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLE--LDFKEEAGSGDGYAKVMSDAFIKAE  245 (401)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH-TTCEECC--C--------CCHHHHHHSHHHHHHH
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCEEEE--ecccccccccccchhhccHHHHHHH
Confidence            468999997 6  9999999999999999888  77888887743 3322100  000              0       


Q ss_pred             --cccc--CcceEEEE-----c----CcCChhhhhcCCCCceeeccc
Q 009674          410 --SYAA--HKTKIWLV-----G----DDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       410 --~~~~--~~~~vwiv-----g----~~~~~~~q~~a~~G~~f~~~~  443 (529)
                        ++++  +.+|++|.     |    ..++.+....|++|.++++++
T Consensus       246 ~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva  292 (401)
T 1x13_A          246 MELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA  292 (401)
T ss_dssp             HHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence              2332  45677662     3    336788999999999999999

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=94.10  E-value=0.13  Score=52.73  Aligned_cols=67  Identities=16%  Similarity=0.228  Sum_probs=46.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccc----cccceeeeccccc-CcceEEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE----AQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~----~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      ...+|.++|+ |  .||+++|..|++.|.  .+.|  .++++.+....++...    ....+...+++++ ++++++|+
T Consensus        20 ~~~kV~ViGa-G--~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~~daDiVIi   95 (330)
T 3ldh_A           20 SYNKITVVGC-D--AVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVSAGSKLVVI   95 (330)
T ss_dssp             CCCEEEEEST-T--HHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSCSSCSEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHhCCCCEEEE
Confidence            3568999999 8  999999999999888  7777  6777666543332221    1122223348887 89988776

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=94.08  E-value=0.059  Score=51.53  Aligned_cols=45  Identities=18%  Similarity=0.288  Sum_probs=35.1

Q ss_pred             CCCcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhC
Q 009674          351 KTTAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRI  397 (529)
Q Consensus       351 ~~~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~~  397 (529)
                      ...+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.   +..+++.++.
T Consensus        12 ~~~k~vlITGa~~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   63 (271)
T 3ek2_A           12 LDGKRILLTGLLSNR--SIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF   63 (271)
T ss_dssp             TTTCEEEECCCCSTT--SHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCCCC--cHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc
Confidence            357899999998  6  8999999999999999998  553   3444444443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=94.06  E-value=0.04  Score=52.71  Aligned_cols=40  Identities=13%  Similarity=0.224  Sum_probs=34.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC---cEEEe--cchhhHHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLK  394 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~---~~v~l--~~~~~~~~l~  394 (529)
                      .+.|+|+|++|  -||+++|+.|.++|   .+|.+  |+.++.+.++
T Consensus        21 ~k~vlITGasg--gIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~   65 (267)
T 1sny_A           21 MNSILITGCNR--GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE   65 (267)
T ss_dssp             CSEEEESCCSS--HHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH
Confidence            46899999998  99999999999999   89988  7777665553

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=94.05  E-value=0.1  Score=56.51  Aligned_cols=86  Identities=13%  Similarity=0.035  Sum_probs=61.9

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----c
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----G  422 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g  422 (529)
                      -..++|.++|. |  .||+.+|+.|...|.+|+.  ++.++..  +.. ..+.     .+.++++  +++|+++.    -
T Consensus       275 L~GktVgIIG~-G--~IG~~vA~~l~~~G~~V~v~d~~~~~~~--~a~-~~G~-----~~~~l~ell~~aDiVi~~~~t~  343 (494)
T 3d64_A          275 IAGKIAVVAGY-G--DVGKGCAQSLRGLGATVWVTEIDPICAL--QAA-MEGY-----RVVTMEYAADKADIFVTATGNY  343 (494)
T ss_dssp             CTTCEEEEECC-S--HHHHHHHHHHHTTTCEEEEECSCHHHHH--HHH-TTTC-----EECCHHHHTTTCSEEEECSSSS
T ss_pred             cCCCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEEeCChHhHH--HHH-HcCC-----EeCCHHHHHhcCCEEEECCCcc
Confidence            45678999995 5  9999999999999999999  5554432  111 1111     1335554  56777552    3


Q ss_pred             CcCChhhhhcCCCCceeecccccCc
Q 009674          423 DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       423 ~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                      ..|+.+.+.+|++|+++|++++.+.
T Consensus       344 ~lI~~~~l~~MK~gAilINvgrg~v  368 (494)
T 3d64_A          344 HVINHDHMKAMRHNAIVCNIGHFDS  368 (494)
T ss_dssp             CSBCHHHHHHCCTTEEEEECSSSSC
T ss_pred             cccCHHHHhhCCCCcEEEEcCCCcc
Confidence            4688899999999999999999766

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=93.98  E-value=0.1  Score=56.24  Aligned_cols=86  Identities=13%  Similarity=0.076  Sum_probs=62.2

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE----c
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----G  422 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g  422 (529)
                      -..++|.++|. |  .||+.+|+.|...|.+|+.  ++.++..+..+.   +.     .+.++++  +++|+++.    -
T Consensus       255 l~GktVgIIG~-G--~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~---g~-----~~~~l~ell~~aDiVi~~~~t~  323 (479)
T 1v8b_A          255 ISGKIVVICGY-G--DVGKGCASSMKGLGARVYITEIDPICAIQAVME---GF-----NVVTLDEIVDKGDFFITCTGNV  323 (479)
T ss_dssp             CTTSEEEEECC-S--HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTT---TC-----EECCHHHHTTTCSEEEECCSSS
T ss_pred             cCCCEEEEEee-C--HHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHc---CC-----EecCHHHHHhcCCEEEECCChh
Confidence            35678999994 6  9999999999999999999  444443211111   11     2335554  67777663    3


Q ss_pred             CcCChhhhhcCCCCceeecccccCc
Q 009674          423 DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       423 ~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                      ..|+.+....|++|+++|++++.+.
T Consensus       324 ~lI~~~~l~~MK~gailiNvgrg~~  348 (479)
T 1v8b_A          324 DVIKLEHLLKMKNNAVVGNIGHFDD  348 (479)
T ss_dssp             SSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             hhcCHHHHhhcCCCcEEEEeCCCCc
Confidence            5578889999999999999999777

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=93.93  E-value=0.094  Score=53.34  Aligned_cols=84  Identities=17%  Similarity=0.170  Sum_probs=56.9

Q ss_pred             HHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc
Q 009674          341 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  413 (529)
Q Consensus       341 taavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  413 (529)
                      |+..+++-+.     -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++...++ |++.    .            
T Consensus       148 Tp~gv~~lL~~~~i~l~Gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~~~~T~~l~-l~~~----~------------  208 (300)
T 4a26_A          148 TAKGVIVLLKRCGIEMAGKRAVVLGRSN--IVGAPVAALLMKENATVTIVHSGTSTED-MIDY----L------------  208 (300)
T ss_dssp             HHHHHHHHHHHHTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTSCHHH-HHHH----H------------
T ss_pred             CHHHHHHHHHHcCCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhh----h------------
Confidence            5566655443     3678999999997  7999999999999999999  3232222 0000    0            


Q ss_pred             CcceEEEE--c--CcCChhhhhcCCCCceeecccccCc
Q 009674          414 HKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       414 ~~~~vwiv--g--~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                      +++||+|.  |  +.++++.   .++|+++||++ +++
T Consensus       209 ~~ADIVI~Avg~p~~I~~~~---vk~GavVIDvg-i~~  242 (300)
T 4a26_A          209 RTADIVIAAMGQPGYVKGEW---IKEGAAVVDVG-TTP  242 (300)
T ss_dssp             HTCSEEEECSCCTTCBCGGG---SCTTCEEEECC-CEE
T ss_pred             ccCCEEEECCCCCCCCcHHh---cCCCcEEEEEe-ccC
Confidence            35566662  2  3455554   49999999999 554

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=93.92  E-value=0.037  Score=55.33  Aligned_cols=33  Identities=18%  Similarity=0.165  Sum_probs=27.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      +.|+|+|++|  -||+++|+.|.++|.+|.+  |+.+
T Consensus         2 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   36 (372)
T 1db3_A            2 KVALITGVTG--QDGSYLAEFLLEKGYEVHGIKRRAS   36 (372)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEECC---
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCCc
Confidence            4699999999  9999999999999999988  5543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=93.90  E-value=0.056  Score=51.53  Aligned_cols=42  Identities=14%  Similarity=0.100  Sum_probs=36.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-----~~~~~~~~l~~~~  397 (529)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+     |++++++++++++
T Consensus         2 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~   48 (244)
T 1zmo_A            2 VIALVTHARH--FAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN   48 (244)
T ss_dssp             CEEEESSTTS--TTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh
Confidence            5789999998  9999999999999999986     4567788887776

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=93.90  E-value=0.048  Score=54.26  Aligned_cols=119  Identities=16%  Similarity=0.135  Sum_probs=70.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccc
Q 009674          335 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  411 (529)
Q Consensus       335 v~Gnsltaavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~  411 (529)
                      |||.....+..-..+. ..++|+|.|+-   -.|++++..|.+.|+ +|++  |+.++.++|.++++.+...      ++
T Consensus       102 TD~~G~~~~l~~~~~~-~~~~vlvlGaG---gaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~------~~  171 (271)
T 1npy_A          102 TDYIAIVKLIEKYHLN-KNAKVIVHGSG---GMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN------SL  171 (271)
T ss_dssp             HHHHHHHHHHHHTTCC-TTSCEEEECSS---TTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEES------CC
T ss_pred             CCHHHHHHHHHHhCCC-CCCEEEEECCc---HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccch------hh
Confidence            5666666655433444 34689999987   579999999999997 6877  8889999998876432110      11


Q ss_pred             ccCcceEEE----EcCcC------ChhhhhcCCCCceeecccccCcc--CC----C-CCceeecCCcccc
Q 009674          412 AAHKTKIWL----VGDDL------TGKEQARAPKGTIFIPYTQIPPR--KL----R-KDCFYHSTPAMII  464 (529)
Q Consensus       412 ~~~~~~vwi----vg~~~------~~~~q~~a~~G~~f~~~~~~~~~--~~----R-~dc~y~~~~a~~~  464 (529)
                      +..+++++|    +|..-      .+-+....++|.+++|.+ -.|.  .+    | +-|.+..+..|-+
T Consensus       172 ~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~Dlv-Y~P~~T~ll~~A~~~G~~~i~Gl~MLv  240 (271)
T 1npy_A          172 ENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVV-AMPVETPFIRYAQARGKQTISGAAVIV  240 (271)
T ss_dssp             TTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECC-CSSSSCHHHHHHHHTTCEEECHHHHHH
T ss_pred             hcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEee-cCCCCCHHHHHHHHCCCEEECCHHHHH
Confidence            113456666    22210      010111225677888887 4333  11    2 4566666666643

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=93.88  E-value=0.065  Score=57.00  Aligned_cols=109  Identities=16%  Similarity=0.203  Sum_probs=64.2

Q ss_pred             cCChhHHHHHHhcCcCC--CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--c---------
Q 009674          336 DGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------  400 (529)
Q Consensus       336 ~Gnsltaavv~~~i~~~--~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~--~---------  400 (529)
                      +|+....-+=..++.+.  ..+|.++|+ |  .+|.++|..|++ |.+|++  +++++.+++++....  +         
T Consensus        17 ~~~~~~~~~~~~~~~r~~~~mkIaVIGl-G--~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~   92 (432)
T 3pid_A           17 RGSHMASMTGGQQMGRGSEFMKITISGT-G--YVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE   92 (432)
T ss_dssp             ------------------CCCEEEEECC-S--HHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH
T ss_pred             ccchhhhccCCcccccccCCCEEEEECc-C--HHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhh
Confidence            34444443444445443  448999996 5  999999999998 999999  899999999875211  0         


Q ss_pred             cccceeeeccccc--CcceEEE--EcCcCCh--------------hhhhcCCCCceeecccccCcc
Q 009674          401 AQHNLVLSTSYAA--HKTKIWL--VGDDLTG--------------KEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       401 ~~~~l~~~~~~~~--~~~~vwi--vg~~~~~--------------~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      ...++...+++++  ++++++|  |.+..++              ++...+++|++++.-|-+||.
T Consensus        93 ~~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pg  158 (432)
T 3pid_A           93 KPLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVG  158 (432)
T ss_dssp             SCCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTT
T ss_pred             ccCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChH
Confidence            0123223347753  7777755  4333322              122236899999999989987

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=93.88  E-value=0.072  Score=51.46  Aligned_cols=83  Identities=16%  Similarity=0.262  Sum_probs=56.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCC--
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT--  426 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~--  426 (529)
                      .+|.++|+ |  .+|+++|+.|.+.|.+ |.+  |++++.++++++.+...      .+++++  ++++++|+--.-+  
T Consensus        11 m~i~iiG~-G--~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~Dvvi~av~~~~~   81 (266)
T 3d1l_A           11 TPIVLIGA-G--NLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEY------TTDLAEVNPYAKLYIVSLKDSAF   81 (266)
T ss_dssp             CCEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE------ESCGGGSCSCCSEEEECCCHHHH
T ss_pred             CeEEEEcC-C--HHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce------eCCHHHHhcCCCEEEEecCHHHH
Confidence            46999997 7  9999999999999988 666  88899998887653211      235553  5777766311000  


Q ss_pred             h---hhh-hcCCCCceeeccccc
Q 009674          427 G---KEQ-ARAPKGTIFIPYTQI  445 (529)
Q Consensus       427 ~---~~q-~~a~~G~~f~~~~~~  445 (529)
                      .   ++. ...++|+++++.+..
T Consensus        82 ~~v~~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           82 AELLQGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHHHHHTTCCTTCEEEECCTT
T ss_pred             HHHHHHHHhhcCCCcEEEECCCC
Confidence            0   111 235689999999873

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=93.86  E-value=0.062  Score=51.08  Aligned_cols=40  Identities=10%  Similarity=0.094  Sum_probs=34.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      .+.|+|+|++|  -||+++|+.|++ |.+|.+  |++++.+++++
T Consensus         5 ~k~vlITGas~--gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~   46 (245)
T 3e9n_A            5 KKIAVVTGATG--GMGIEIVKDLSR-DHIVYALGRNPEHLAALAE   46 (245)
T ss_dssp             -CEEEEESTTS--HHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT
T ss_pred             CCEEEEEcCCC--HHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh
Confidence            46799999998  999999999998 888887  88888888876

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=93.81  E-value=0.051  Score=53.06  Aligned_cols=32  Identities=22%  Similarity=0.182  Sum_probs=28.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--c-ch
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CK  387 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~  387 (529)
                      ++|+|+||+|  -||+++++.|.++|.+|..  | +.
T Consensus         2 k~vlVTGatG--~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            2 GRVCVTGGTG--FLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CEEEEECChh--HHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            5799999999  9999999999999999986  6 54

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=93.77  E-value=0.053  Score=50.62  Aligned_cols=39  Identities=18%  Similarity=0.167  Sum_probs=33.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKL  393 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~--~~~v~l--~~~~~~~~l  393 (529)
                      .+.|+|+|++|  -||+++++.|.++  |.+|..  |++++.+++
T Consensus         4 ~~~ilVtGasG--~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~   46 (253)
T 1xq6_A            4 LPTVLVTGASG--RTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI   46 (253)
T ss_dssp             CCEEEEESTTS--HHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT
T ss_pred             CCEEEEEcCCc--HHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc
Confidence            46799999999  9999999999988  899988  777776654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=93.75  E-value=0.099  Score=52.50  Aligned_cols=101  Identities=18%  Similarity=0.234  Sum_probs=69.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDDL  425 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~  425 (529)
                      ...+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.++++++ +      +...+++++  ++++++|  +.+.-
T Consensus        30 ~~~~I~iIG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-g------~~~~~~~~e~~~~aDvVi~~vp~~~   99 (320)
T 4dll_A           30 YARKITFLGT-G--SMGLPMARRLCEAGYALQVWNRTPARAASLAAL-G------ATIHEQARAAARDADIVVSMLENGA   99 (320)
T ss_dssp             CCSEEEEECC-T--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-T------CEEESSHHHHHTTCSEEEECCSSHH
T ss_pred             CCCEEEEECc-c--HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-C------CEeeCCHHHHHhcCCEEEEECCCHH
Confidence            3458999998 4  9999999999999999999  889999988776 1      112336654  6777755  32211


Q ss_pred             Ch-------hhhhcCCCCceeecccccCccC-------CC-CCceeecCCcc
Q 009674          426 TG-------KEQARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAM  462 (529)
Q Consensus       426 ~~-------~~q~~a~~G~~f~~~~~~~~~~-------~R-~dc~y~~~~a~  462 (529)
                      .-       +-...+++|+++++.+.++|..       ++ +.+.|...|.+
T Consensus       100 ~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~  151 (320)
T 4dll_A          100 VVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVS  151 (320)
T ss_dssp             HHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred             HHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence            11       1122478999999999987761       11 45567666654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=93.75  E-value=0.071  Score=51.77  Aligned_cols=43  Identities=16%  Similarity=0.237  Sum_probs=34.8

Q ss_pred             CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 009674          353 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~  397 (529)
                      .+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.+   ..++++++.
T Consensus         6 ~k~vlVTGas~~~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   55 (275)
T 2pd4_A            6 GKKGLIVGVANNK--SIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL   55 (275)
T ss_dssp             TCEEEEECCCSTT--SHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence            3679999999  7  8999999999999999998  6665   555555543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=93.72  E-value=0.03  Score=56.18  Aligned_cols=40  Identities=15%  Similarity=0.203  Sum_probs=33.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~  394 (529)
                      .++|+|+||||  -||+++++.|.++ |.+|..  |+.++.+.+.
T Consensus        24 ~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~   66 (372)
T 3slg_A           24 AKKVLILGVNG--FIGHHLSKRILETTDWEVFGMDMQTDRLGDLV   66 (372)
T ss_dssp             CCEEEEESCSS--HHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc
Confidence            46899999999  9999999999987 889888  7776655443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=93.59  E-value=0.069  Score=50.96  Aligned_cols=43  Identities=12%  Similarity=0.156  Sum_probs=34.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch--hhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK--DDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~--~~~~~l~~~~  397 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+ |.+  |++  +..++++++.
T Consensus         5 ~k~vlVtGas~--gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~   52 (254)
T 1sby_A            5 NKNVIFVAALG--GIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN   52 (254)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC
Confidence            46799999998  9999999999999996 766  654  5566776554

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=93.59  E-value=0.091  Score=51.56  Aligned_cols=100  Identities=13%  Similarity=0.155  Sum_probs=67.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCc--C
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--L  425 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~  425 (529)
                      .+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.++++++       .+...+++++  ++++++|  +.+.  +
T Consensus         2 ~~i~iIG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~~~~~~aDvvi~~vp~~~~~   71 (287)
T 3pef_A            2 QKFGFIGL-G--IMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-------GAERAATPCEVVESCPVTFAMLADPAAA   71 (287)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-------TCEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             CEEEEEee-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCeecCCHHHHHhcCCEEEEEcCCHHHH
Confidence            47899996 5  9999999999999999999  899999988775       1112335654  5676655  3211  1


Q ss_pred             Ch-----hh-hhcCCCCceeecccccCccC-------CC-CCceeecCCccc
Q 009674          426 TG-----KE-QARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAMI  463 (529)
Q Consensus       426 ~~-----~~-q~~a~~G~~f~~~~~~~~~~-------~R-~dc~y~~~~a~~  463 (529)
                      ..     ++ ...+++|+++++.+.++|..       ++ +.+.|...|.+.
T Consensus        72 ~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g  123 (287)
T 3pef_A           72 EEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSG  123 (287)
T ss_dssp             HHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred             HHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcC
Confidence            10     11 12468999999999887761       11 456666666543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=93.58  E-value=0.055  Score=53.93  Aligned_cols=42  Identities=17%  Similarity=0.099  Sum_probs=34.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      .+.|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.+.++
T Consensus         9 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~   52 (357)
T 1rkx_A            9 GKRVFVTGHTG--FKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET   52 (357)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHhCCCeEEEEeCCCcccchhhHh
Confidence            35799999999  9999999999999999988  766655544444

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=93.56  E-value=0.13  Score=53.14  Aligned_cols=89  Identities=16%  Similarity=0.163  Sum_probs=61.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc-cce------------e-ee--------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-HNL------------V-LS--------  408 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~-~~l------------~-~~--------  408 (529)
                      .++|+++|+ |  .||+++++.+...|.+|+.  ++.++++.+++ ++.... .+.            . ..        
T Consensus       172 g~~V~ViGa-G--~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          172 PARVLVFGV-G--VAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCH
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            468999997 6  9999999999999999888  77788877765 433211 000            0 00        


Q ss_pred             c-cccc--CcceEEE--E---cC----cCChhhhhcCCCCceeecccccC
Q 009674          409 T-SYAA--HKTKIWL--V---GD----DLTGKEQARAPKGTIFIPYTQIP  446 (529)
Q Consensus       409 ~-~~~~--~~~~vwi--v---g~----~~~~~~q~~a~~G~~f~~~~~~~  446 (529)
                      . .+++  +.++++|  +   |.    .++.+....|++|.++++++ .+
T Consensus       248 ~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva-~~  296 (384)
T 1l7d_A          248 AEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA-VE  296 (384)
T ss_dssp             HHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT-GG
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe-cC
Confidence            0 1433  5667766  3   42    35788899999999999999 44

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=93.53  E-value=0.11  Score=52.23  Aligned_cols=89  Identities=17%  Similarity=0.185  Sum_probs=61.5

Q ss_pred             HHHHHHhcCc---CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--
Q 009674          341 AAAVVVNSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--  413 (529)
Q Consensus       341 taavv~~~i~---~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--  413 (529)
                      |++.+++-+.   -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+                     ++++  
T Consensus       135 Tp~gv~~lL~~~~l~Gk~vvVvG~s~--iVG~plA~lL~~~gAtVtv~~~~t~---------------------~L~~~~  191 (276)
T 3ngx_A          135 TPRAVIDIMDYYGYHENTVTIVNRSP--VVGRPLSMMLLNRNYTVSVCHSKTK---------------------DIGSMT  191 (276)
T ss_dssp             HHHHHHHHHHHHTCCSCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHHHH
T ss_pred             cHHHHHHHHHHhCcCCCEEEEEcCCh--HHHHHHHHHHHHCCCeEEEEeCCcc---------------------cHHHhh
Confidence            5556555554   3578999999997  8999999999999999999  2211                     3332  


Q ss_pred             CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc--CCCCCcee
Q 009674          414 HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY  456 (529)
Q Consensus       414 ~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y  456 (529)
                      +++||+|  +|  +.++++..   ++|+++||++ +++.  ++--|+-|
T Consensus       192 ~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvg-i~~~~gkl~GDVdf  236 (276)
T 3ngx_A          192 RSSKIVVVAVGRPGFLNREMV---TPGSVVIDVG-INYVNDKVVGDANF  236 (276)
T ss_dssp             HHSSEEEECSSCTTCBCGGGC---CTTCEEEECC-CEEETTEEECSBCH
T ss_pred             ccCCEEEECCCCCccccHhhc---cCCcEEEEec-cCccCCceeccccH
Confidence            4566766  33  35666554   9999999999 6663  22255543

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=93.52  E-value=0.036  Score=55.60  Aligned_cols=103  Identities=13%  Similarity=0.179  Sum_probs=66.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--E------
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V------  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--v------  421 (529)
                      ++|-++|--   .+|+.+|+.|.+.|.+|+.  |++++.++|+++ +..      ...+.++  +.++++|  +      
T Consensus         6 ~kIgfIGLG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~------~~~s~~e~~~~~dvvi~~l~~~~~~   75 (297)
T 4gbj_A            6 EKIAFLGLG---NLGTPIAEILLEAGYELVVWNRTASKAEPLTKL-GAT------VVENAIDAITPGGIVFSVLADDAAV   75 (297)
T ss_dssp             CEEEEECCS---TTHHHHHHHHHHTTCEEEEC-------CTTTTT-TCE------ECSSGGGGCCTTCEEEECCSSHHHH
T ss_pred             CcEEEEecH---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc-CCe------EeCCHHHHHhcCCceeeeccchhhH
Confidence            469999864   9999999999999999999  888887766543 111      1234543  5565544  2      


Q ss_pred             cCcCChhhhhcCCCCceeecccccCccCC-------C-CCceeecCCccccCC
Q 009674          422 GDDLTGKEQARAPKGTIFIPYTQIPPRKL-------R-KDCFYHSTPAMIIPP  466 (529)
Q Consensus       422 g~~~~~~~q~~a~~G~~f~~~~~~~~~~~-------R-~dc~y~~~~a~~~P~  466 (529)
                      .+.+..+-...+++|.++++.|-++|...       + +.+.|.+.|.+--|.
T Consensus        76 ~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~  128 (297)
T 4gbj_A           76 EELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPE  128 (297)
T ss_dssp             HHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHH
T ss_pred             HHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCcc
Confidence            22333334456799999999999998811       1 678899888865443

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=93.50  E-value=0.1  Score=52.76  Aligned_cols=141  Identities=18%  Similarity=0.218  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHcCCcEEEe--cc-------cccccccccCC---ceeeecC-CCCcce----------eeecCC-------
Q 009674          289 IEEAILEADAKGVKVISL--GL-------LNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS-------  338 (529)
Q Consensus       289 I~~Ai~~A~k~G~kv~~L--G~-------ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn-------  338 (529)
                      +.+-.+.|++.|++..-.  ..       +..+++||.|-   ++.++.= |++++.          |=|||-       
T Consensus        51 v~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~  130 (288)
T 1b0a_A           51 VASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGR  130 (288)
T ss_dssp             HHHHHHHHHHHTCEECCEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhH
Confidence            445567788889887553  22       23336678773   3555531 333331          113333       


Q ss_pred             ---------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 009674          339 ---------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  402 (529)
Q Consensus       339 ---------sltaavv~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~  402 (529)
                               .-|+..+++-+.     -..++|+|+|+.+  -||+-+|+.|.++|-.|++  ++.+              
T Consensus       131 l~~g~~~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~hs~t~--------------  194 (288)
T 1b0a_A          131 LCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASN--IVGRPMSMELLLAGCTTTVTHRFTK--------------  194 (288)
T ss_dssp             HHTTCCSSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHTTTCEEEEECSSCS--------------
T ss_pred             HhCCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCh--HHHHHHHHHHHHCCCeEEEEeCCch--------------
Confidence                     235666655543     3578999999996  7899999999999999999  2221              


Q ss_pred             cceeeeccccc--CcceEEE--Ec--CcCChhhhhcCCCCceeecccccCcc---CCCCCcee
Q 009674          403 HNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  456 (529)
Q Consensus       403 ~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y  456 (529)
                             ++++  ++++++|  +|  +.++++..   ++|+++||++ +++.   ++--|+-|
T Consensus       195 -------~L~~~~~~ADIVI~Avg~p~lI~~~~v---k~GavVIDVg-i~r~~~g~l~GDVdf  246 (288)
T 1b0a_A          195 -------NLRHHVENADLLIVAVGKPGFIPGDWI---KEGAIVIDVG-INRLENGKVVGDVVF  246 (288)
T ss_dssp             -------CHHHHHHHCSEEEECSCCTTCBCTTTS---CTTCEEEECC-CEECTTSCEECSBCH
T ss_pred             -------hHHHHhccCCEEEECCCCcCcCCHHHc---CCCcEEEEcc-CCccCCCCccCCcCH
Confidence                   2332  3556666  22  23555554   8999999999 7764   23356553

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=93.48  E-value=0.066  Score=53.85  Aligned_cols=45  Identities=20%  Similarity=0.170  Sum_probs=37.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-----------cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----------ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-----------~~~~~~~~l~~~~~  398 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+           |+.++.+++.+++.
T Consensus         8 ~gk~~lVTGas~--GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~   63 (319)
T 1gz6_A            8 DGRVVLVTGAGG--GLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR   63 (319)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHH
Confidence            346799999998  9999999999999999987           35677777766653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=93.45  E-value=0.055  Score=51.91  Aligned_cols=33  Identities=21%  Similarity=0.265  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~   51 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAI   51 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEE
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence            467899999992128999999999999999988

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=93.41  E-value=0.086  Score=50.78  Aligned_cols=42  Identities=17%  Similarity=0.294  Sum_probs=34.0

Q ss_pred             CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 009674          353 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~  396 (529)
                      .+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.   +..++++++
T Consensus         9 ~k~vlVTGas~~~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~   57 (265)
T 1qsg_A            9 GKRILVTGVASKL--SIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ   57 (265)
T ss_dssp             TCEEEECCCCSTT--SHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH
T ss_pred             CCEEEEECCCCCC--CHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh
Confidence            3579999999  7  8999999999999999988  665   445555544

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=93.38  E-value=0.17  Score=51.80  Aligned_cols=66  Identities=17%  Similarity=0.245  Sum_probs=45.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc--cceeeec--cccc-CcceEEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ--HNLVLST--SYAA-HKTKIWLV  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~--~~l~~~~--~~~~-~~~~vwiv  421 (529)
                      ...+|.++|| |  .||+++|..|++.|.  .+.+  +++++.+-...++.....  .+ +.++  ++++ ++++++|+
T Consensus         8 ~~~kV~ViGa-G--~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~-~~i~~~~~~a~~~aDiVvi   82 (326)
T 3vku_A            8 DHQKVILVGD-G--AVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSP-KKIYSAEYSDAKDADLVVI   82 (326)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCC-CEEEECCGGGGTTCSEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCC-cEEEECcHHHhcCCCEEEE
Confidence            4568999997 7  999999999998887  6777  777777744433322211  12 2233  5666 88888775

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=93.30  E-value=0.086  Score=52.05  Aligned_cols=37  Identities=16%  Similarity=0.180  Sum_probs=30.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      ..+.|+|+|++|++-||+++|+.|+++|.+|.+  |+++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~   68 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA   68 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            356899999997223999999999999999998  6643

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=93.29  E-value=0.079  Score=49.78  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=35.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +|+++|+ |  .+|+.+|+.|.++|.+|++  +++++.++++++.
T Consensus         2 ~iiIiG~-G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~   43 (218)
T 3l4b_C            2 KVIIIGG-E--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL   43 (218)
T ss_dssp             CEEEECC-H--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc
Confidence            5899997 6  9999999999999999999  8899999887654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=93.28  E-value=0.077  Score=53.81  Aligned_cols=36  Identities=8%  Similarity=0.141  Sum_probs=31.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      .++|+|+||||  -||+++++.|.++|.+|..  |+.++.
T Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~   42 (352)
T 1xgk_A            5 KKTIAVVGATG--RQGASLIRVAAAVGHHVRAQVHSLKGL   42 (352)
T ss_dssp             CCCEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCSCSH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHhCCCEEEEEECCCChh
Confidence            35799999999  9999999999999998887  766654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=93.26  E-value=0.041  Score=58.38  Aligned_cols=112  Identities=11%  Similarity=-0.010  Sum_probs=60.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCccccccceeeeccccc-Ccce-EEEEcCcC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIPVEAQHNLVLSTSYAA-HKTK-IWLVGDDL  425 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~-vwivg~~~  425 (529)
                      .+.|+|+||||  -||+++++.|.++|.+|..  |+.+   ..+++++.+..-..      ....+ ...+ .++.||.-
T Consensus       150 ~~~VLVTGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~------~~~~~~~~~~v~~v~~Dl~  221 (508)
T 4f6l_B          150 LGNTLLTGATG--FLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFS------EETVEMMLSNIEVIVGDFE  221 (508)
T ss_dssp             CEEEEESCTTS--HHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSC------HHHHHHHSTTEEEEEEBTT
T ss_pred             CCeEEEECCcc--chHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcc------cccchhccCceEEEecCCc
Confidence            46899999999  9999999999999999988  6666   33333333211100      00011 1122 36667776


Q ss_pred             ChhhhhcCCCCceeecccccCccCCCCCceeecCCccccCCCCccccccccccCcchhHHHHH
Q 009674          426 TGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRI  488 (529)
Q Consensus       426 ~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a  488 (529)
                      +++...                ...+-|+.|+....+....+.+.+..-|..-.+..+.||..
T Consensus       222 d~~~l~----------------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~  268 (508)
T 4f6l_B          222 CMDDVV----------------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ  268 (508)
T ss_dssp             BCSSCC----------------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT
T ss_pred             ccccCC----------------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh
Confidence            655552                11335677776655543344333333344445555555554

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=93.24  E-value=0.1  Score=44.37  Aligned_cols=40  Identities=25%  Similarity=0.339  Sum_probs=35.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      .+|+++|+ |  .+|+.+|+.|.+.|.+|++  +++++.+.++++
T Consensus         5 m~i~IiG~-G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~   46 (140)
T 1lss_A            5 MYIIIAGI-G--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE   46 (140)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh
Confidence            47999998 7  9999999999999999988  888888888765

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=93.22  E-value=0.06  Score=52.24  Aligned_cols=37  Identities=22%  Similarity=0.256  Sum_probs=32.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++..
T Consensus        27 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~   65 (260)
T 3gem_A           27 SAPILITGASQ--RVGLHCALRLLEHGHRVIISYRTEHASV   65 (260)
T ss_dssp             CCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence            56799999998  9999999999999999999  7766643

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=93.21  E-value=0.073  Score=52.70  Aligned_cols=36  Identities=8%  Similarity=0.156  Sum_probs=30.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      ....|+|+|++|  -||+++|+.|.++|.+|..  |+.++
T Consensus        19 ~~~~vlVTGasG--~iG~~l~~~L~~~g~~V~~~~r~~~~   56 (330)
T 2pzm_A           19 SHMRILITGGAG--CLGSNLIEHWLPQGHEILVIDNFATG   56 (330)
T ss_dssp             TCCEEEEETTTS--HHHHHHHHHHGGGTCEEEEEECCSSS
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            356899999999  9999999999999999988  54443

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=93.21  E-value=0.17  Score=50.49  Aligned_cols=44  Identities=20%  Similarity=0.152  Sum_probs=37.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      ..+.|+++|++|  -||+++++.+.+.|.+|..  +++++++.+ ++++
T Consensus       145 ~g~~vlV~Ga~g--giG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g  190 (333)
T 1v3u_A          145 GGETVLVSAAAG--AVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIG  190 (333)
T ss_dssp             SSCEEEEESTTB--HHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT
T ss_pred             CCCEEEEecCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcC
Confidence            457899999998  9999999999999999988  788888887 4444

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=93.21  E-value=0.13  Score=47.08  Aligned_cols=53  Identities=19%  Similarity=0.116  Sum_probs=40.2

Q ss_pred             HHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          341 AAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       341 taavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ||+-.+...  .+..+.|+++|++|  -||+++++.+.+.|.+|..  +++++.+.+++
T Consensus        25 ta~~~l~~~~~~~~g~~vlV~Ga~g--giG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~   81 (198)
T 1pqw_A           25 TAWHSLCEVGRLSPGERVLIHSATG--GVGMAAVSIAKMIGARIYTTAGSDAKREMLSR   81 (198)
T ss_dssp             HHHHHHHTTSCCCTTCEEEETTTTS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCEEEEeeCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            444444322  23456899999998  9999999999999999887  78888877754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=93.18  E-value=0.093  Score=51.18  Aligned_cols=43  Identities=16%  Similarity=0.261  Sum_probs=34.3

Q ss_pred             CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 009674          353 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~l--~~~~---~~~~l~~~~  397 (529)
                      .+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.+   ..++++++.
T Consensus        21 ~k~vlVTGas~~~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   70 (285)
T 2p91_A           21 GKRALITGVANER--SIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF   70 (285)
T ss_dssp             TCEEEECCCSSTT--SHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc
Confidence            4679999998  6  8999999999999999998  6654   455555443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=93.15  E-value=0.084  Score=50.06  Aligned_cols=34  Identities=24%  Similarity=0.379  Sum_probs=30.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++
T Consensus         3 k~vlVTGas~--giG~~~a~~l~~~G~~V~~~~r~~~~   38 (239)
T 2ekp_A            3 RKALVTGGSR--GIGRAIAEALVARGYRVAIASRNPEE   38 (239)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            5799999998  9999999999999999988  77665

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=93.11  E-value=0.093  Score=52.54  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=28.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc--cCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~--~~~~v~l  384 (529)
                      .+.|+|+|++|  -||+++|+.|.+  +|.+|..
T Consensus        10 ~~~vlVTGatG--~IG~~l~~~L~~~~~g~~V~~   41 (362)
T 3sxp_A           10 NQTILITGGAG--FVGSNLAFHFQENHPKAKVVV   41 (362)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHHCTTSEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHhhCCCCeEEE
Confidence            46899999999  999999999998  9999998

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=93.07  E-value=0.056  Score=51.88  Aligned_cols=37  Identities=8%  Similarity=0.114  Sum_probs=31.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      -.+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.
T Consensus        21 m~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~   59 (251)
T 3orf_A           21 MSKNILVLGGSG--ALGAEVVKFFKSKSWNTISIDFRENPN   59 (251)
T ss_dssp             -CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred             cCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCcccc
Confidence            356899999998  9999999999999999998  666543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=93.06  E-value=0.14  Score=52.36  Aligned_cols=65  Identities=17%  Similarity=0.202  Sum_probs=45.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CcceEEEE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      ..+|.++|| |  .+|.++|..|++.|. ++.|  +++++.+....++...     .... +.. +++++ ++++++|+
T Consensus         7 ~~kI~viGa-G--~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-v~~t~d~~a~~~aDiVIi   81 (324)
T 3gvi_A            7 RNKIALIGS-G--MIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAK-FTGANDYAAIEGADVVIV   81 (324)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCC-EEEESSGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCE-EEEeCCHHHHCCCCEEEE
Confidence            358999999 8  999999999998888 8888  7777765333332221     1222 333 47776 88888664

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=93.05  E-value=0.052  Score=54.66  Aligned_cols=100  Identities=13%  Similarity=0.176  Sum_probs=68.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcC----
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD----  423 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~----  423 (529)
                      ++|-++|--   .+|+++|+.|.+.|.+|+.  |++++.+.|+++ +..      ...+.++  ++++++|  +-+    
T Consensus         4 ~kIgfIGlG---~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~-Ga~------~a~s~~e~~~~~dvv~~~l~~~~~v   73 (300)
T 3obb_A            4 KQIAFIGLG---HMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA-GAS------AARSARDAVQGADVVISMLPASQHV   73 (300)
T ss_dssp             CEEEEECCS---TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-TCE------ECSSHHHHHTTCSEEEECCSCHHHH
T ss_pred             CEEEEeeeh---HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHc-CCE------EcCCHHHHHhcCCceeecCCchHHH
Confidence            468889864   9999999999999999999  999999998775 111      1224443  5666644  211    


Q ss_pred             --cCChh--hhhcCCCCceeecccccCcc-------CCC-CCceeecCCccc
Q 009674          424 --DLTGK--EQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMI  463 (529)
Q Consensus       424 --~~~~~--~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~  463 (529)
                        .+..+  -...+++|+++||.|-++|.       .++ +.+.|.+-|+.-
T Consensus        74 ~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsG  125 (300)
T 3obb_A           74 EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSG  125 (300)
T ss_dssp             HHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEES
T ss_pred             HHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence              11111  12357899999999999987       122 677888888754

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=93.00  E-value=0.12  Score=49.73  Aligned_cols=86  Identities=14%  Similarity=0.124  Sum_probs=55.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCc--CCh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD--LTG  427 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~--~~~  427 (529)
                      .+|.++| +|  .+|+++++.|.+.|.+|.+  |++++.++++++.+...      .+++++  ++++++|+--.  ...
T Consensus         4 m~i~iiG-~G--~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~D~Vi~~v~~~~~~   74 (259)
T 2ahr_A            4 MKIGIIG-VG--KMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY------AMSHQDLIDQVDLVILGIKPQLFE   74 (259)
T ss_dssp             CEEEEEC-CS--HHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB------CSSHHHHHHTCSEEEECSCGGGHH
T ss_pred             cEEEEEC-CC--HHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe------eCCHHHHHhcCCEEEEEeCcHhHH
Confidence            4799999 56  9999999999999988888  88888888876532111      224543  56666553221  111


Q ss_pred             hhhhcCCCCceeecccc-cCcc
Q 009674          428 KEQARAPKGTIFIPYTQ-IPPR  448 (529)
Q Consensus       428 ~~q~~a~~G~~f~~~~~-~~~~  448 (529)
                      +-...+.+|.++|+.+- +++.
T Consensus        75 ~v~~~l~~~~~vv~~~~~~~~~   96 (259)
T 2ahr_A           75 TVLKPLHFKQPIISMAAGISLQ   96 (259)
T ss_dssp             HHHTTSCCCSCEEECCTTCCHH
T ss_pred             HHHHHhccCCEEEEeCCCCCHH
Confidence            12223457888887743 6554

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=92.97  E-value=0.13  Score=52.33  Aligned_cols=84  Identities=13%  Similarity=0.077  Sum_probs=57.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  421 (529)
                      .++|.++|. |  .||+++|+.|...|.+|+.  ++.++.+..++ .+       +...++++  ++++++++       
T Consensus       155 g~~vgIIG~-G--~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~-~g-------~~~~~l~e~l~~aDvVi~~vp~~~~  223 (330)
T 2gcg_A          155 QSTVGIIGL-G--RIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE-FQ-------AEFVSTPELAAQSDFIVVACSLTPA  223 (330)
T ss_dssp             TCEEEEECC-S--HHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT-TT-------CEECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCcchhHHHh-cC-------ceeCCHHHHHhhCCEEEEeCCCChH
Confidence            458999997 6  9999999999999999988  55555554432 11       11124443  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccccCc
Q 009674          422 -GDDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       422 -g~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                       ...++.+....+++|++++..++.++
T Consensus       224 t~~~i~~~~~~~mk~gailIn~srg~~  250 (330)
T 2gcg_A          224 TEGLCNKDFFQKMKETAVFINISRGDV  250 (330)
T ss_dssp             TTTCBSHHHHHHSCTTCEEEECSCGGG
T ss_pred             HHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence             23344566678999999999998554

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=92.96  E-value=0.038  Score=52.95  Aligned_cols=39  Identities=26%  Similarity=0.236  Sum_probs=33.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~  392 (529)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++
T Consensus        14 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~   54 (247)
T 1uzm_A           14 VSRSVLVTGGNR--GIGLAIAQRLAADGHKVAVTHRGSGAPKG   54 (247)
T ss_dssp             CCCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSSCCCTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence            346899999998  9999999999999999998  77665543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=92.95  E-value=0.11  Score=48.10  Aligned_cols=88  Identities=11%  Similarity=0.091  Sum_probs=55.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc-cceeeeccccc--CcceEEEEc--CcCCh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-HNLVLSTSYAA--HKTKIWLVG--DDLTG  427 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~-~~l~~~~~~~~--~~~~vwivg--~~~~~  427 (529)
                      +|.++|++|  .+|+++|+.|.+.|.+|.+  |++++.++++++...... .+ +..+++++  ++++++|.-  ....+
T Consensus         2 ~i~iiGa~G--~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~Vi~~~~~~~~~   78 (212)
T 1jay_A            2 RVALLGGTG--NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS-ITGMKNEDAAEACDIAVLTIPWEHAI   78 (212)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC-EEEEEHHHHHHHCSEEEECSCHHHHH
T ss_pred             eEEEEcCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC-CChhhHHHHHhcCCEEEEeCChhhHH
Confidence            589999999  9999999999999999988  888888887765321000 11 12234443  567776631  11111


Q ss_pred             h---hhh-cCCCCceeecccc-cC
Q 009674          428 K---EQA-RAPKGTIFIPYTQ-IP  446 (529)
Q Consensus       428 ~---~q~-~a~~G~~f~~~~~-~~  446 (529)
                      +   +.. .+ +|+++++.+. ++
T Consensus        79 ~~~~~l~~~~-~~~~vi~~~~g~~  101 (212)
T 1jay_A           79 DTARDLKNIL-REKIVVSPLVPVS  101 (212)
T ss_dssp             HHHHHTHHHH-TTSEEEECCCCEE
T ss_pred             HHHHHHHHHc-CCCEEEEcCCCcC
Confidence            1   111 12 4888888886 44

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=92.91  E-value=0.12  Score=50.58  Aligned_cols=99  Identities=13%  Similarity=0.102  Sum_probs=66.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCc--CC
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LT  426 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~~  426 (529)
                      +|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.+++.       .+...++.++  ++++++|  +.+.  +.
T Consensus         3 ~I~iiG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~~~~~~advvi~~v~~~~~~~   72 (287)
T 3pdu_A            3 TYGFLGL-G--IMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-------GARQASSPAEVCAACDITIAMLADPAAAR   72 (287)
T ss_dssp             CEEEECC-S--TTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-------TCEECSCHHHHHHHCSEEEECCSSHHHHH
T ss_pred             eEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCeecCCHHHHHHcCCEEEEEcCCHHHHH
Confidence            6889995 5  9999999999999999999  889999988765       1111235554  5666655  2221  11


Q ss_pred             h-----hh-hhcCCCCceeecccccCccCC-------C-CCceeecCCccc
Q 009674          427 G-----KE-QARAPKGTIFIPYTQIPPRKL-------R-KDCFYHSTPAMI  463 (529)
Q Consensus       427 ~-----~~-q~~a~~G~~f~~~~~~~~~~~-------R-~dc~y~~~~a~~  463 (529)
                      .     ++ ...+++|+++++.|.++|...       + +.+.|...|.+.
T Consensus        73 ~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g  123 (287)
T 3pdu_A           73 EVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSG  123 (287)
T ss_dssp             HHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred             HHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccC
Confidence            1     11 124689999999999877611       1 455676666543

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=92.91  E-value=0.1  Score=45.77  Aligned_cols=41  Identities=22%  Similarity=0.354  Sum_probs=36.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +.+|+++|. |  .+|+.+|+.|.+.|.+|++  +++++.++++++
T Consensus         7 ~~~viIiG~-G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~   49 (140)
T 3fwz_A            7 CNHALLVGY-G--RVGSLLGEKLLASDIPLVVIETSRTRVDELRER   49 (140)
T ss_dssp             CSCEEEECC-S--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT
T ss_pred             CCCEEEECc-C--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc
Confidence            568999998 5  9999999999999999999  899999988763

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=92.88  E-value=0.071  Score=50.03  Aligned_cols=34  Identities=18%  Similarity=0.298  Sum_probs=30.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      +.|+|+|++|  -||+++|+.|.++|.+|.+  |++++
T Consensus         2 k~vlVtGasg--~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (255)
T 2dkn_A            2 SVIAITGSAS--GIGAALKELLARAGHTVIGIDRGQAD   37 (255)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             cEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            4699999998  9999999999999999998  66554

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=92.87  E-value=0.12  Score=52.74  Aligned_cols=68  Identities=16%  Similarity=0.149  Sum_probs=47.3

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-cccc-c-Ccce
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYA-A-HKTK  417 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~-~-~~~~  417 (529)
                      .++...+|.++|| |  .+|.++|..|++.|. +|.|  +++++++.....+...     ...+ +.. ++++ + ++++
T Consensus         5 ~~~~~~kI~VIGa-G--~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~ea~~~aD   80 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-G--MIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAEYSYEAALTGAD   80 (331)
T ss_dssp             CCSCCCEEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEECSHHHHHTTCS
T ss_pred             cCCCCCEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCE-EEEeCCHHHHhCCCC
Confidence            3445568999999 7  999999999999997 8888  7777777633332211     1122 333 4887 5 8888


Q ss_pred             EEE
Q 009674          418 IWL  420 (529)
Q Consensus       418 vwi  420 (529)
                      ++|
T Consensus        81 iVi   83 (331)
T 1pzg_A           81 CVI   83 (331)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            766

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=92.82  E-value=0.26  Score=52.96  Aligned_cols=96  Identities=13%  Similarity=0.120  Sum_probs=67.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-Cc-EEEe--cchh----hHHHHHhhC-cc---cc-----------ccceeeec
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQM-GI-KVAT--ICKD----DYEKLKLRI-PV---EA-----------QHNLVLST  409 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~-~~-~v~l--~~~~----~~~~l~~~~-~~---~~-----------~~~l~~~~  409 (529)
                      ..+|.|+|+-   .+|.++|..|++. |. +|++  ++++    +.+.|++.. +.   +.           ..++...+
T Consensus        18 ~mkIaVIGlG---~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~tt   94 (478)
T 3g79_A           18 IKKIGVLGMG---YVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTP   94 (478)
T ss_dssp             CCEEEEECCS---TTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEES
T ss_pred             CCEEEEECcC---HHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeC
Confidence            4579999986   9999999999999 99 9999  8888    999998742 11   11           23333334


Q ss_pred             cccc-CcceEEE--EcCcCChh---------------hh-hcCCCCceeecccccCccCCC
Q 009674          410 SYAA-HKTKIWL--VGDDLTGK---------------EQ-ARAPKGTIFIPYTQIPPRKLR  451 (529)
Q Consensus       410 ~~~~-~~~~vwi--vg~~~~~~---------------~q-~~a~~G~~f~~~~~~~~~~~R  451 (529)
                      +.++ ++++++|  |++..+++               +. ..+++|++++.-|-+||...|
T Consensus        95 d~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~  155 (478)
T 3g79_A           95 DFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTE  155 (478)
T ss_dssp             CGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTT
T ss_pred             cHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHH
Confidence            6444 6776655  66554321               11 247899999999989988433

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=92.74  E-value=0.12  Score=49.46  Aligned_cols=31  Identities=19%  Similarity=0.275  Sum_probs=27.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+
T Consensus         8 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~   38 (257)
T 3tl3_A            8 RDAVAVVTGGAS--GLGLATTKRLLDAGAQVVV   38 (257)
T ss_dssp             --CEEEEETTTS--HHHHHHHHHHHHHTCEEEE
T ss_pred             cCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEE
Confidence            356799999998  9999999999999999998

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=92.72  E-value=0.16  Score=50.73  Aligned_cols=86  Identities=17%  Similarity=0.172  Sum_probs=60.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCc--
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--  424 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--  424 (529)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+.+++. +.      ...++.++  ++++++|  +.+.  
T Consensus        21 m~~I~iIG~-G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-g~------~~~~~~~~~~~~aDvvi~~vp~~~~   90 (310)
T 3doj_A           21 MMEVGFLGL-G--IMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-GA------SVCESPAEVIKKCKYTIAMLSDPCA   90 (310)
T ss_dssp             SCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TC------EECSSHHHHHHHCSEEEECCSSHHH
T ss_pred             CCEEEEECc-c--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CC------eEcCCHHHHHHhCCEEEEEcCCHHH
Confidence            468999996 4  9999999999999999999  889999988754 11      11235554  5666655  3221  


Q ss_pred             CCh-----hh-hhcCCCCceeecccccCcc
Q 009674          425 LTG-----KE-QARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       425 ~~~-----~~-q~~a~~G~~f~~~~~~~~~  448 (529)
                      ++.     ++ ...+++|+++++.+.++|.
T Consensus        91 ~~~v~~~~~~l~~~l~~g~~vv~~st~~~~  120 (310)
T 3doj_A           91 ALSVVFDKGGVLEQICEGKGYIDMSTVDAE  120 (310)
T ss_dssp             HHHHHHSTTCGGGGCCTTCEEEECSCCCHH
T ss_pred             HHHHHhCchhhhhccCCCCEEEECCCCCHH
Confidence            111     11 1356899999999988776

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=92.67  E-value=0.075  Score=53.41  Aligned_cols=33  Identities=18%  Similarity=0.165  Sum_probs=29.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      +.|+|+|++|  -||+++|+.|.++|.+|..  |+.+
T Consensus        25 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   59 (375)
T 1t2a_A           25 NVALITGITG--QDGSYLAEFLLEKGYEVHGIVRRSS   59 (375)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             cEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCcc
Confidence            5799999999  9999999999999999988  5543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=92.67  E-value=0.06  Score=50.87  Aligned_cols=35  Identities=17%  Similarity=0.282  Sum_probs=30.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.
T Consensus         4 k~vlITGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~   40 (236)
T 1ooe_A            4 GKVIVYGGKG--ALGSAILEFFKKNGYTVLNIDLSANDQ   40 (236)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCCTT
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEecCcccc
Confidence            5799999998  9999999999999999998  766553

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=92.63  E-value=0.15  Score=50.36  Aligned_cols=29  Identities=17%  Similarity=0.226  Sum_probs=27.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +.|+|+|++|  -||+++|+.|.++|.+|..
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   31 (348)
T 1ek6_A            3 EKVLVTGGAG--YIGSHTVLELLEAGYLPVV   31 (348)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            5799999999  9999999999999999887

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=92.63  E-value=0.063  Score=51.88  Aligned_cols=36  Identities=25%  Similarity=0.284  Sum_probs=31.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++++
T Consensus        21 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~   58 (253)
T 2nm0_A           21 SRSVLVTGGNR--GIGLAIARAFADAGDKVAITYRSGEPP   58 (253)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSCCC
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHhh
Confidence            56899999998  9999999999999999988  766554

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=92.61  E-value=0.11  Score=51.64  Aligned_cols=99  Identities=18%  Similarity=0.211  Sum_probs=67.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--cCc--
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDD--  424 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~--  424 (529)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.++++++       .+...+++++  + ++++|+  .+.  
T Consensus        15 ~~~I~vIG~-G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~~~~~-aDvvi~~vp~~~~   83 (296)
T 3qha_A           15 QLKLGYIGL-G--NMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-------GATLADSVADVAA-ADLIHITVLDDAQ   83 (296)
T ss_dssp             CCCEEEECC-S--TTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-------TCEECSSHHHHTT-SSEEEECCSSHHH
T ss_pred             CCeEEEECc-C--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-------CCEEcCCHHHHHh-CCEEEEECCChHH
Confidence            357999995 5  9999999999999999999  889999988765       1112336664  5 877552  211  


Q ss_pred             CC---hhhhhcCCCCceeecccccCccC-------CC-CCceeecCCcc
Q 009674          425 LT---GKEQARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAM  462 (529)
Q Consensus       425 ~~---~~~q~~a~~G~~f~~~~~~~~~~-------~R-~dc~y~~~~a~  462 (529)
                      +.   .+-...+++|+++++.|.++|..       ++ +.+.|...|.+
T Consensus        84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~  132 (296)
T 3qha_A           84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVS  132 (296)
T ss_dssp             HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence            10   11123478999999999887761       11 35566666654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=92.61  E-value=0.071  Score=50.63  Aligned_cols=36  Identities=14%  Similarity=0.195  Sum_probs=31.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~   44 (241)
T 1dhr_A            7 ARRVLVYGGRG--ALGSRCVQAFRARNWWVASIDVVENEE   44 (241)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEESSCCTT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhCCCEEEEEeCChhhc
Confidence            45799999998  9999999999999999998  766543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=92.60  E-value=0.064  Score=54.05  Aligned_cols=63  Identities=16%  Similarity=0.160  Sum_probs=42.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCc-cccccceeeec-cccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIP-VEAQHNLVLST-SYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~----l~~~~~-~~~~~~l~~~~-~~~~-~~~~vwiv  421 (529)
                      +|.++|| |  .+|.++|..|++.|.  ++.|  +++++.+.    |++..+ .....+ +..+ ++++ ++++++|+
T Consensus         2 kI~ViGa-G--~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~-i~~t~d~~a~~~aDiVVi   75 (294)
T 1oju_A            2 KLGFVGA-G--RVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK-IVGGADYSLLKGSEIIVV   75 (294)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCE-EEEESCGGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCE-EEEeCCHHHhCCCCEEEE
Confidence            6899999 8  999999999998888  8888  77777653    222211 011122 3333 7556 88888765

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=92.59  E-value=0.22  Score=49.06  Aligned_cols=92  Identities=24%  Similarity=0.283  Sum_probs=60.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc------------------cceeeeccccc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ------------------HNLVLSTSYAA  413 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~------------------~~l~~~~~~~~  413 (529)
                      ++|.++|+ |  .+|+++|+.|++.|.+|++  +++++.+++++++.....                  ..+...+++++
T Consensus         5 ~kV~VIGa-G--~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~   81 (283)
T 4e12_A            5 TNVTVLGT-G--VLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ   81 (283)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence            57999998 5  9999999999999999999  888888888765321100                  11112336663


Q ss_pred             --CcceEEE--EcCcCChh-----hh-hcCCCCceeecccc-cCcc
Q 009674          414 --HKTKIWL--VGDDLTGK-----EQ-ARAPKGTIFIPYTQ-IPPR  448 (529)
Q Consensus       414 --~~~~vwi--vg~~~~~~-----~q-~~a~~G~~f~~~~~-~~~~  448 (529)
                        ++++++|  |.+.++.+     +. ..+++|++++..+. +|..
T Consensus        82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~  127 (283)
T 4e12_A           82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS  127 (283)
T ss_dssp             HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred             HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence              7787766  33321111     11 24789999986543 5544

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=92.57  E-value=0.22  Score=52.25  Aligned_cols=110  Identities=15%  Similarity=0.226  Sum_probs=70.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Ccc-cc-----------ccceeeeccccc--Ccce
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPV-EA-----------QHNLVLSTSYAA--HKTK  417 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~-~~-----------~~~l~~~~~~~~--~~~~  417 (529)
                      +|.++|+ |  .+|.++|..|++.|.+|++  +++++.+.+++. .+. +.           ..++...+++++  ++++
T Consensus         2 kI~VIG~-G--~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD   78 (436)
T 1mv8_A            2 RISIFGL-G--YVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (436)
T ss_dssp             EEEEECC-S--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             EEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence            5889994 6  9999999999999999998  889999999875 111 00           112223346653  6676


Q ss_pred             EEE--EcCcCCh-------------hhhh-cCCC---CceeecccccCccC----C----------C--CCceeecCCcc
Q 009674          418 IWL--VGDDLTG-------------KEQA-RAPK---GTIFIPYTQIPPRK----L----------R--KDCFYHSTPAM  462 (529)
Q Consensus       418 vwi--vg~~~~~-------------~~q~-~a~~---G~~f~~~~~~~~~~----~----------R--~dc~y~~~~a~  462 (529)
                      ++|  |++..++             ++.. .+++   |++++..|.++|..    +          +  .|+.+..+|..
T Consensus        79 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~  158 (436)
T 1mv8_A           79 VSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEF  158 (436)
T ss_dssp             EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCC
T ss_pred             EEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECccc
Confidence            655  5444320             1111 2467   99999888777642    1          1  35555566665


Q ss_pred             ccCCC
Q 009674          463 IIPPS  467 (529)
Q Consensus       463 ~~P~~  467 (529)
                      .-|+.
T Consensus       159 ~~~G~  163 (436)
T 1mv8_A          159 LREST  163 (436)
T ss_dssp             CCTTS
T ss_pred             ccccc
Confidence            55554

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=92.57  E-value=0.039  Score=56.02  Aligned_cols=35  Identities=20%  Similarity=0.222  Sum_probs=30.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      .++|+|+|+||  -||+++++.|.++|.+|..  |+.++
T Consensus        29 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~   65 (379)
T 2c5a_A           29 NLKISITGAGG--FIASHIARRLKHEGHYVIASDWKKNE   65 (379)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCS
T ss_pred             CCeEEEECCcc--HHHHHHHHHHHHCCCeEEEEECCCcc
Confidence            35899999999  9999999999999999988  65544

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=92.56  E-value=0.15  Score=49.02  Aligned_cols=39  Identities=18%  Similarity=0.262  Sum_probs=34.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      .+|+|+|| |  -||+++++.|.++|.+|..  |+.++.+.+++
T Consensus         6 ~~ilVtGa-G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~   46 (286)
T 3ius_A            6 GTLLSFGH-G--YTARVLSRALAPQGWRIIGTSRNPDQMEAIRA   46 (286)
T ss_dssp             CEEEEETC-C--HHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH
T ss_pred             CcEEEECC-c--HHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh
Confidence            57999998 9  9999999999999999988  88888777754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=92.54  E-value=0.084  Score=50.15  Aligned_cols=34  Identities=18%  Similarity=0.306  Sum_probs=30.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |++++
T Consensus         2 k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~   37 (257)
T 1fjh_A            2 SIIVISGCAT--GIGAATRKVLEAAGHQIVGIDIRDAE   37 (257)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            4689999998  9999999999999999988  66554

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=92.52  E-value=0.19  Score=50.81  Aligned_cols=42  Identities=12%  Similarity=0.045  Sum_probs=36.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       162 ~g~~vlV~Ga~g--giG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  205 (354)
T 2j8z_A          162 AGDYVLIHAGLS--GVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK  205 (354)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            456899999998  9999999999999999888  78888888743

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=92.49  E-value=0.093  Score=51.07  Aligned_cols=37  Identities=22%  Similarity=0.325  Sum_probs=31.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.
T Consensus        13 ~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~   51 (269)
T 3vtz_A           13 TDKVAIVTGGSS--GIGLAVVDALVRYGAKVVSVSLDEKSD   51 (269)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCC--C
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCchhc
Confidence            577899999998  9999999999999999998  665543

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=92.35  E-value=0.64  Score=46.57  Aligned_cols=93  Identities=15%  Similarity=0.161  Sum_probs=59.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-cc---ccccceeeec-cccc-CcceEEEE--c
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV---EAQHNLVLST-SYAA-HKTKIWLV--G  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~-~~---~~~~~l~~~~-~~~~-~~~~vwiv--g  422 (529)
                      .-+|.++|+-   .+|+++|..|.+.|.+|++  |++++.+.|+++- +.   +...+ +..+ +.++ ++++++|+  -
T Consensus        14 ~~kI~iIG~G---~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~aDvVil~vk   89 (335)
T 1z82_A           14 EMRFFVLGAG---SWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKIT-VRATNDLEEIKKEDILVIAIP   89 (335)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCC-SEEESCGGGCCTTEEEEECSC
T ss_pred             CCcEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeee-EEEeCCHHHhcCCCEEEEECC
Confidence            3468999976   9999999999999999998  8889999998762 11   00001 2222 5544 56677663  1


Q ss_pred             CcCChhhhhcC-CCCceeecccc-cCccC
Q 009674          423 DDLTGKEQARA-PKGTIFIPYTQ-IPPRK  449 (529)
Q Consensus       423 ~~~~~~~q~~a-~~G~~f~~~~~-~~~~~  449 (529)
                      ..-.++=...+ |+|+++++.+. +++..
T Consensus        90 ~~~~~~v~~~l~~~~~~vv~~~nGi~~~~  118 (335)
T 1z82_A           90 VQYIREHLLRLPVKPSMVLNLSKGIEIKT  118 (335)
T ss_dssp             GGGHHHHHTTCSSCCSEEEECCCCCCTTT
T ss_pred             HHHHHHHHHHhCcCCCEEEEEeCCCCCCc
Confidence            11111111111 27899999985 77753

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=92.33  E-value=0.16  Score=51.65  Aligned_cols=67  Identities=16%  Similarity=0.179  Sum_probs=44.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc--hhhHHHHHhhCcccc----ccceeeec-cccc-CcceEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC--KDDYEKLKLRIPVEA----QHNLVLST-SYAA-HKTKIWL  420 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~--~~~~~~l~~~~~~~~----~~~l~~~~-~~~~-~~~~vwi  420 (529)
                      ...+|.++|+ |  .+|+++|..|++.|. +|.+  ++  +++.+-...++....    ...-+..+ ++++ ++++++|
T Consensus         7 ~~~kv~ViGa-G--~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVI   83 (315)
T 3tl2_A            7 KRKKVSVIGA-G--FTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVV   83 (315)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEE
Confidence            3468999997 7  999999999999999 8888  55  455554433332211    11113333 6777 8998876


Q ss_pred             E
Q 009674          421 V  421 (529)
Q Consensus       421 v  421 (529)
                      .
T Consensus        84 i   84 (315)
T 3tl2_A           84 I   84 (315)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=92.32  E-value=0.22  Score=51.46  Aligned_cols=84  Identities=14%  Similarity=0.143  Sum_probs=56.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------  421 (529)
                      ..++|-++|- |  .||+++|+.|...|.+|+..+...-.....+.+.+.      +.++++  ++++++++        
T Consensus       159 ~g~tvGIIGl-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~------~~~l~ell~~aDiV~l~~Plt~~t  229 (352)
T 3gg9_A          159 KGQTLGIFGY-G--KIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAV------AESKDALFEQSDVLSVHLRLNDET  229 (352)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEE------CSSHHHHHHHCSEEEECCCCSTTT
T ss_pred             CCCEEEEEeE-C--HHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceE------eCCHHHHHhhCCEEEEeccCcHHH
Confidence            3568999997 4  999999999999999999833222111111122111      335554  56666552        


Q ss_pred             cCcCChhhhhcCCCCceeecccc
Q 009674          422 GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                      -..++.+....+++|+++|.+++
T Consensus       230 ~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          230 RSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             TTCBCHHHHTTSCTTCEEEECSC
T ss_pred             HHhhCHHHHhhCCCCcEEEECCC
Confidence            23466788889999999999998

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=92.23  E-value=0.13  Score=52.56  Aligned_cols=66  Identities=18%  Similarity=0.196  Sum_probs=45.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccc-cccceeeeccccc-CcceEEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVE-AQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~----l~~~~~~~-~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      ...+|.++|+ |  .||+++|..|++.|.  ++.+  +++++.+.    |++..+.- .... +...++++ ++++++|+
T Consensus         4 ~~~kI~ViGa-G--~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~-i~~~~~~a~~~aDvVvi   79 (326)
T 3pqe_A            4 HVNKVALIGA-G--FVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVK-TSYGTYEDCKDADIVCI   79 (326)
T ss_dssp             SCCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCE-EEEECGGGGTTCSEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeE-EEeCcHHHhCCCCEEEE
Confidence            4568999997 7  999999999998887  7777  77777776    44432211 1111 12226666 88888665

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=92.20  E-value=0.21  Score=51.88  Aligned_cols=144  Identities=16%  Similarity=0.199  Sum_probs=82.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc---CcceEEE---EcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL---VGD  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwi---vg~  423 (529)
                      ..++|.+.|. |  .||+.+|+.|.+.|-+|++  .+.++ ++..++.+.+.      + +.++   .+++|.+   .+.
T Consensus       174 ~GktV~I~G~-G--nVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~ga~~------v-~~~ell~~~~DIliP~A~~~  242 (355)
T 1c1d_A          174 DGLTVLVQGL-G--AVGGSLASLAAEAGAQLLVADTDTER-VAHAVALGHTA------V-ALEDVLSTPCDVFAPCAMGG  242 (355)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCEE------C-CGGGGGGCCCSEEEECSCSC
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhcCCEE------e-ChHHhhcCccceecHhHHHh
Confidence            4579999997 5  9999999999999999999  44444 44444432211      1 2222   3667766   455


Q ss_pred             cCChhhhhcCCCCceeecccccCccCCCCCceeecCCccccCCCCccccccccccCcchhHHHHHhhHhh-h-hc--CCC
Q 009674          424 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-A-LE--GWD  499 (529)
Q Consensus       424 ~~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~-a-lE--gw~  499 (529)
                      .|+.++...++ ...++--++-|...-.-+=...+.+.+-+|+-                 ++-|+|++- . +|  +|+
T Consensus       243 ~I~~~~~~~lk-~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd~-----------------~aNaGGV~~s~~~E~~~w~  304 (355)
T 1c1d_A          243 VITTEVARTLD-CSVVAGAANNVIADEAASDILHARGILYAPDF-----------------VANAGGAIHLVGREVLGWS  304 (355)
T ss_dssp             CBCHHHHHHCC-CSEECCSCTTCBCSHHHHHHHHHTTCEECCHH-----------------HHTTHHHHHHHHHHTTCCC
T ss_pred             hcCHHHHhhCC-CCEEEECCCCCCCCHHHHHHHHhCCEEEECCe-----------------EEcCCCeeeeeeehhcCCC
Confidence            67777765554 34444444321100000000122222223332                 245566663 2 55  888


Q ss_pred             CCccch-h---hhhHHHHHHHHHhcCCcc
Q 009674          500 LNECGQ-T---MCDIHQVWHASLRHGFRP  524 (529)
Q Consensus       500 ~~e~G~-i---v~~id~i~~aa~kHGF~p  524 (529)
                      +.|+-+ +   ++..++|++.|.++|-.+
T Consensus       305 ~e~v~~~l~~i~~~~~~i~~~~~~~~~~~  333 (355)
T 1c1d_A          305 ESVVHERAVAIGDTLNQVFEISDNDGVTP  333 (355)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            887665 3   456679999999988644

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=92.20  E-value=0.13  Score=50.60  Aligned_cols=40  Identities=15%  Similarity=0.132  Sum_probs=33.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  393 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l  393 (529)
                      +.+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++.+.+
T Consensus         6 ~gKvalVTGas~--GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~   47 (258)
T 4gkb_A            6 QDKVVIVTGGAS--GIGGAISMRLAEERAIPVVFARHAPDGAFL   47 (258)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCCHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCcccHHHH
Confidence            356889999997  9999999999999999999  776665443

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=92.19  E-value=0.21  Score=48.47  Aligned_cols=85  Identities=12%  Similarity=0.124  Sum_probs=54.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CcceEEEEcCcC--Ch--
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGDDL--TG--  427 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~~~--~~--  427 (529)
                      +|.++| .|  .+|+++|+.|.+.|.+|.+  |++++.+.+++. +...  .  ..+++++ ++++++|+--.-  ..  
T Consensus         2 ~i~iiG-~G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~--~--~~~~~~~~~~~D~vi~av~~~~~~~~   73 (279)
T 2f1k_A            2 KIGVVG-LG--LIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER-QLVD--E--AGQDLSLLQTAKIIFLCTPIQLILPT   73 (279)
T ss_dssp             EEEEEC-CS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TSCS--E--EESCGGGGTTCSEEEECSCHHHHHHH
T ss_pred             EEEEEc-Cc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC-CCCc--c--ccCCHHHhCCCCEEEEECCHHHHHHH
Confidence            588999 46  9999999999999999988  888888887643 1100  0  1224444 566776531110  00  


Q ss_pred             -hhh-hcCCCCceeecccccCc
Q 009674          428 -KEQ-ARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       428 -~~q-~~a~~G~~f~~~~~~~~  447 (529)
                       ++. ...++|+++++++-+++
T Consensus        74 ~~~l~~~~~~~~~vv~~~~~~~   95 (279)
T 2f1k_A           74 LEKLIPHLSPTAIVTDVASVKT   95 (279)
T ss_dssp             HHHHGGGSCTTCEEEECCSCCH
T ss_pred             HHHHHhhCCCCCEEEECCCCcH
Confidence             111 23578999998865554

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=92.09  E-value=0.074  Score=45.47  Aligned_cols=39  Identities=15%  Similarity=0.275  Sum_probs=32.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ++|+++|+ |  .+|+.+|+.|.+.|.+|.+  +++++.+.+++
T Consensus         7 ~~v~I~G~-G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~   47 (144)
T 2hmt_A            7 KQFAVIGL-G--RFGGSIVKELHRMGHEVLAVDINEEKVNAYAS   47 (144)
T ss_dssp             CSEEEECC-S--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT
T ss_pred             CcEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            46999998 8  9999999999999999888  77777665543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=91.99  E-value=0.18  Score=49.25  Aligned_cols=84  Identities=13%  Similarity=0.194  Sum_probs=57.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--cCcC--
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDL--  425 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~--  425 (529)
                      .+|.++| .|  .+|+++|+.|.+.|.+|.+  |++++.+.++++ +      +...+++++  ++++++|+  .+.-  
T Consensus         6 m~i~iiG-~G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g------~~~~~~~~~~~~~~D~vi~~v~~~~~~   75 (299)
T 1vpd_A            6 MKVGFIG-LG--IMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-G------AETASTAKAIAEQCDVIITMLPNSPHV   75 (299)
T ss_dssp             CEEEEEC-CS--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-T------CEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             ceEEEEC-ch--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-C------CeecCCHHHHHhCCCEEEEECCCHHHH
Confidence            3799999 56  9999999999999999988  888888888765 1      011225543  56666553  2111  


Q ss_pred             Ch-----hhh-hcCCCCceeecccccCc
Q 009674          426 TG-----KEQ-ARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       426 ~~-----~~q-~~a~~G~~f~~~~~~~~  447 (529)
                      +.     ++. ..+++|+++++.+..++
T Consensus        76 ~~~~~~~~~l~~~l~~~~~vv~~s~~~~  103 (299)
T 1vpd_A           76 KEVALGENGIIEGAKPGTVLIDMSSIAP  103 (299)
T ss_dssp             HHHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred             HHHHhCcchHhhcCCCCCEEEECCCCCH
Confidence            10     111 24688999999987665

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=91.94  E-value=0.22  Score=49.02  Aligned_cols=28  Identities=25%  Similarity=0.290  Sum_probs=26.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +|+|+|++|  -||+++|+.|.++|.+|..
T Consensus         2 ~vlVTGatG--~iG~~l~~~L~~~G~~V~~   29 (338)
T 1udb_A            2 RVLVTGGSG--YIGSHTCVQLLQNGHDVII   29 (338)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            589999999  9999999999999999987

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=91.92  E-value=0.11  Score=48.62  Aligned_cols=33  Identities=21%  Similarity=0.353  Sum_probs=29.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      +.|+|+|++|  -||+++|+.|.++|.+|.+  |+++
T Consensus         3 k~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~   37 (242)
T 1uay_A            3 RSALVTGGAS--GLGRAAALALKARGYRVVVLDLRRE   37 (242)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEccCcc
Confidence            5799999998  9999999999999999988  5543

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=91.89  E-value=0.4  Score=51.01  Aligned_cols=128  Identities=16%  Similarity=0.146  Sum_probs=86.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--cc-----------ccceeeeccccc--C
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYAA--H  414 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~--~~-----------~~~l~~~~~~~~--~  414 (529)
                      +.-++.++|.-   .+|.++|..|++.|.+|++  +++++.+.|++....  +.           ..+|...+++++  +
T Consensus         7 ~~~~~~vIGlG---~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~   83 (446)
T 4a7p_A            7 GSVRIAMIGTG---YVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVK   83 (446)
T ss_dssp             CCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHT
T ss_pred             CceEEEEEcCC---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHh
Confidence            45578999976   9999999999999999999  999999999875221  11           123333447763  7


Q ss_pred             cceEEE--EcCcCCh--------------hhh-hcCCCCceeecccccCccCC------------CCCceeecCCccccC
Q 009674          415 KTKIWL--VGDDLTG--------------KEQ-ARAPKGTIFIPYTQIPPRKL------------RKDCFYHSTPAMIIP  465 (529)
Q Consensus       415 ~~~vwi--vg~~~~~--------------~~q-~~a~~G~~f~~~~~~~~~~~------------R~dc~y~~~~a~~~P  465 (529)
                      +++++|  |+...++              ++. ..+++|++++.-|-+||...            +.|+.+..+|..--|
T Consensus        84 ~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a~e  163 (446)
T 4a7p_A           84 DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFLRE  163 (446)
T ss_dssp             TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCCCT
T ss_pred             cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCcccccc
Confidence            777655  5555432              111 25789999999998888611            146777777766666


Q ss_pred             CCCccccccccccCcchhHHH
Q 009674          466 PSLSNMHSCENWLGRRVMSAW  486 (529)
Q Consensus       466 ~~~~~~~~~e~~~p~r~~~Ac  486 (529)
                      ++..    -++..|.++|.+|
T Consensus       164 G~a~----~d~~~p~~ivvG~  180 (446)
T 4a7p_A          164 GAAI----EDFKRPDRVVVGT  180 (446)
T ss_dssp             TSHH----HHHHSCSCEEEEC
T ss_pred             cchh----hhccCCCEEEEeC
Confidence            6531    1244566666664

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=91.85  E-value=0.54  Score=47.31  Aligned_cols=86  Identities=20%  Similarity=0.173  Sum_probs=56.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhh-Cccccccceeeecccc--c-CcceEEEEcCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYA--A-HKTKIWLVGDD  424 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~--~-~~~~vwivg~~  424 (529)
                      ..+|.++| +|  .+|.++|+.|.+.|.  +|..  |++++.+.+++. +..+.      .++++  . ++++++|+--.
T Consensus        33 ~~kI~IIG-~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~------~~~~~~~~~~~aDvVilavp  103 (314)
T 3ggo_A           33 MQNVLIVG-VG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEG------TTSIAKVEDFSPDFVMLSSP  103 (314)
T ss_dssp             CSEEEEES-CS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEE------ESCTTGGGGGCCSEEEECSC
T ss_pred             CCEEEEEe-eC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchh------cCCHHHHhhccCCEEEEeCC
Confidence            36899999 57  999999999999999  8888  788888877654 11111      22333  3 56777663111


Q ss_pred             CC--h---hhh-hcCCCCceeecccccCc
Q 009674          425 LT--G---KEQ-ARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       425 ~~--~---~~q-~~a~~G~~f~~~~~~~~  447 (529)
                      .+  .   ++. ..+++|+++++++-+.+
T Consensus       104 ~~~~~~vl~~l~~~l~~~~iv~d~~Svk~  132 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSEDATVTDQGSVKG  132 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred             HHHHHHHHHHHhhccCCCcEEEECCCCcH
Confidence            11  1   112 24688999999886654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=91.85  E-value=0.12  Score=50.55  Aligned_cols=35  Identities=17%  Similarity=0.239  Sum_probs=29.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      +.+.|+|+||+|  -||+++|+.|.++|.+|..  |+.+
T Consensus        11 ~~~~vlVTGatG--~iG~~l~~~L~~~G~~V~~~~r~~~   47 (321)
T 2pk3_A           11 GSMRALITGVAG--FVGKYLANHLTEQNVEVFGTSRNNE   47 (321)
T ss_dssp             --CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CcceEEEECCCC--hHHHHHHHHHHHCCCEEEEEecCCc
Confidence            567899999999  9999999999999999988  5544

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=91.84  E-value=0.17  Score=52.15  Aligned_cols=86  Identities=10%  Similarity=0.089  Sum_probs=58.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Ccc---eEEE--EcC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKT---KIWL--VGD  423 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~---~vwi--vg~  423 (529)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.++++++ +      +...+++++  +++   +++|  |.+
T Consensus        22 ~mkIgiIGl-G--~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-g------~~~~~s~~e~~~~a~~~DvVi~~vp~   91 (358)
T 4e21_A           22 SMQIGMIGL-G--RMGADMVRRLRKGGHECVVYDLNVNAVQALERE-G------IAGARSIEEFCAKLVKPRVVWLMVPA   91 (358)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-T------CBCCSSHHHHHHHSCSSCEEEECSCG
T ss_pred             CCEEEEECc-h--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-C------CEEeCCHHHHHhcCCCCCEEEEeCCH
Confidence            468999994 6  9999999999999999999  888999988765 1      011224443  344   6644  322


Q ss_pred             cCC----hhhhhcCCCCceeecccccCcc
Q 009674          424 DLT----GKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       424 ~~~----~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      ...    .+-...+++|+++++.+.++|.
T Consensus        92 ~~v~~vl~~l~~~l~~g~iiId~st~~~~  120 (358)
T 4e21_A           92 AVVDSMLQRMTPLLAANDIVIDGGNSHYQ  120 (358)
T ss_dssp             GGHHHHHHHHGGGCCTTCEEEECSSCCHH
T ss_pred             HHHHHHHHHHHhhCCCCCEEEeCCCCChH
Confidence            210    1112346899999999987764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=91.84  E-value=0.12  Score=56.98  Aligned_cols=46  Identities=13%  Similarity=0.133  Sum_probs=36.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c---------chhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---------CKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~---------~~~~~~~l~~~~~~  399 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |         ++++.+++.+++..
T Consensus        18 ~gk~~lVTGas~--GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~   74 (613)
T 3oml_A           18 DGRVAVVTGAGA--GLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK   74 (613)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH
Confidence            456889999997  9999999999999999998  5         66777777776543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=91.77  E-value=0.11  Score=46.19  Aligned_cols=40  Identities=13%  Similarity=0.255  Sum_probs=34.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      ...+|+++|+ |  .+|+.+|+.|.+.|.+|++  +++++.+.++
T Consensus        18 ~~~~v~IiG~-G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~   59 (155)
T 2g1u_A           18 KSKYIVIFGC-G--RLGSLIANLASSSGHSVVVVDKNEYAFHRLN   59 (155)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSC
T ss_pred             CCCcEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            4578999997 7  9999999999999999988  7888877654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=91.75  E-value=0.16  Score=50.41  Aligned_cols=30  Identities=20%  Similarity=0.297  Sum_probs=28.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+|+|+||  -||+++++.|.++|.+|..
T Consensus        27 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   56 (343)
T 2b69_A           27 RKRILITGGAG--FVGSHLTDKLMMDGHEVTV   56 (343)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEEcCcc--HHHHHHHHHHHHCCCEEEE
Confidence            56899999999  9999999999999999988

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=91.75  E-value=0.089  Score=50.73  Aligned_cols=34  Identities=15%  Similarity=0.259  Sum_probs=30.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      +.|+|+||+|  -||+++|+.|.++|.+|.+  |++++
T Consensus         4 k~vlVTGasg--~IG~~la~~L~~~G~~V~~~~r~~~~   39 (267)
T 3rft_A            4 KRLLVTGAAG--QLGRVMRERLAPMAEILRLADLSPLD   39 (267)
T ss_dssp             EEEEEESTTS--HHHHHHHHHTGGGEEEEEEEESSCCC
T ss_pred             CEEEEECCCC--HHHHHHHHHHHhcCCEEEEEecCCcc
Confidence            5799999999  9999999999999999988  65543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=91.73  E-value=0.11  Score=51.06  Aligned_cols=37  Identities=22%  Similarity=0.408  Sum_probs=32.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      -+.++|+|+++  -||+|+|+.|+++|.+|.+  |++|+++
T Consensus        11 GK~alVTGas~--GIG~aia~~la~~Ga~Vv~~~~~~~~~~   49 (242)
T 4b79_A           11 GQQVLVTGGSS--GIGAAIAMQFAELGAEVVALGLDADGVH   49 (242)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTTSTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHh
Confidence            46889999997  9999999999999999999  7776654

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=91.72  E-value=0.45  Score=50.50  Aligned_cols=125  Identities=14%  Similarity=0.157  Sum_probs=81.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc--c-----------ccceeeeccccc--Ccc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE--A-----------QHNLVLSTSYAA--HKT  416 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~--~-----------~~~l~~~~~~~~--~~~  416 (529)
                      .+|.++|+ |  .+|.++|..|++.|.+|++  +++++.+.+++....-  .           ..++...+++++  +++
T Consensus         3 mkI~VIG~-G--~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a   79 (450)
T 3gg2_A            3 LDIAVVGI-G--YVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA   79 (450)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred             CEEEEECc-C--HHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence            47899997 5  9999999999999999999  8999999998752211  0           122223347764  677


Q ss_pred             eEEE--EcCcCCh-------------hhh-hcCCCCceeecccccCcc---CC-----------C--CCceeecCCcccc
Q 009674          417 KIWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-----------R--KDCFYHSTPAMII  464 (529)
Q Consensus       417 ~vwi--vg~~~~~-------------~~q-~~a~~G~~f~~~~~~~~~---~~-----------R--~dc~y~~~~a~~~  464 (529)
                      +++|  |+...++             ++. ..+++|++++.-|-+||.   ++           +  .|+.+..+|..--
T Consensus        80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~  159 (450)
T 3gg2_A           80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLK  159 (450)
T ss_dssp             SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCCC
T ss_pred             CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhhhc
Confidence            7655  5554321             111 236899999999988876   11           1  4677777776656


Q ss_pred             CCCCccccccccccCcchhHH
Q 009674          465 PPSLSNMHSCENWLGRRVMSA  485 (529)
Q Consensus       465 P~~~~~~~~~e~~~p~r~~~A  485 (529)
                      |+...    -++..|.++|.+
T Consensus       160 eG~~~----~~~~~p~~ivvG  176 (450)
T 3gg2_A          160 EGNAI----DDFMKPDRVVVG  176 (450)
T ss_dssp             TTSHH----HHHHSCSCEEEE
T ss_pred             ccchh----hhccCCCEEEEE
Confidence            65532    234456666544

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=91.69  E-value=0.26  Score=49.77  Aligned_cols=43  Identities=14%  Similarity=0.163  Sum_probs=37.5

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       166 ~~g~~VlV~Gg~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  210 (353)
T 4dup_A          166 TEGESVLIHGGTS--GIGTTAIQLARAFGAEVYATAGSTGKCEACER  210 (353)
T ss_dssp             CTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEEcCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            3467899999998  9999999999999999988  78999887765

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=91.68  E-value=0.17  Score=52.11  Aligned_cols=86  Identities=10%  Similarity=0.054  Sum_probs=57.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      ..++|.++|.-   .||+++|+.|...|.+|+.  ++.++-  ..++.+.+      ...++++  +.++++++      
T Consensus       167 ~g~tvGIIG~G---~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~------~~~~l~ell~~aDvV~l~~P~t~  235 (347)
T 1mx3_A          167 RGETLGIIGLG---RVGQAVALRAKAFGFNVLFYDPYLSDG--VERALGLQ------RVSTLQDLLFHSDCVTLHCGLNE  235 (347)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECTTSCTT--HHHHHTCE------ECSSHHHHHHHCSEEEECCCCCT
T ss_pred             CCCEEEEEeEC---HHHHHHHHHHHHCCCEEEEECCCcchh--hHhhcCCe------ecCCHHHHHhcCCEEEEcCCCCH
Confidence            45679999964   9999999999999999988  333321  11221111      1224544  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccccCcc
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                        ...++.+....+++|+++|.+++-++.
T Consensus       236 ~t~~li~~~~l~~mk~gailIN~arg~~v  264 (347)
T 1mx3_A          236 HNHHLINDFTVKQMRQGAFLVNTARGGLV  264 (347)
T ss_dssp             TCTTSBSHHHHTTSCTTEEEEECSCTTSB
T ss_pred             HHHHHhHHHHHhcCCCCCEEEECCCChHH
Confidence              234667888899999999999995544

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=91.62  E-value=0.23  Score=50.49  Aligned_cols=65  Identities=12%  Similarity=0.200  Sum_probs=45.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcccc----ccceeee-ccccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEA----QHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~----~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      .+|.++|| |  .+|.++|..|++.|. +|.+  +++++++.....+....    ...-+.. +++++ ++++++|.
T Consensus        15 ~kI~ViGa-G--~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~~aD~VI~   88 (328)
T 2hjr_A           15 KKISIIGA-G--QIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYLQNSDVVII   88 (328)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCHHHHCCCCEEEE
Confidence            58999999 7  999999999999998 8888  78877775332222111    0111334 47766 88888663

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=91.61  E-value=0.12  Score=50.22  Aligned_cols=31  Identities=23%  Similarity=0.214  Sum_probs=28.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  387 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~  387 (529)
                      +|+|+|+||  =||+++++.|.++|.+|+.  |+.
T Consensus         2 kILVTGatG--fIG~~L~~~L~~~G~~V~~l~R~~   34 (298)
T 4b4o_A            2 RVLVGGGTG--FIGTALTQLLNARGHEVTLVSRKP   34 (298)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCC
Confidence            599999999  9999999999999999988  543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=91.52  E-value=0.1  Score=50.83  Aligned_cols=38  Identities=21%  Similarity=0.268  Sum_probs=32.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+
T Consensus        27 ~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~   66 (266)
T 3uxy_A           27 EGKVALVTGAAG--GIGGAVVTALRAAGARVAVADRAVAGIA   66 (266)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEECSSCCTTSC
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            456899999998  9999999999999999999  6655443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=91.51  E-value=0.12  Score=50.00  Aligned_cols=36  Identities=8%  Similarity=0.150  Sum_probs=31.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus        27 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~   64 (260)
T 3un1_A           27 QQKVVVITGASQ--GIGAGLVRAYRDRNYRVVATSRSIKP   64 (260)
T ss_dssp             TCCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            456899999998  9999999999999999998  65544

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=91.48  E-value=0.26  Score=49.68  Aligned_cols=31  Identities=19%  Similarity=0.143  Sum_probs=27.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ....|+|+|+||  -||+++|+.|.++|.+|..
T Consensus        10 ~~~~vlVTG~tG--fIG~~l~~~L~~~G~~V~~   40 (404)
T 1i24_A           10 HGSRVMVIGGDG--YCGWATALHLSKKNYEVCI   40 (404)
T ss_dssp             --CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCeEEEeCCCc--HHHHHHHHHHHhCCCeEEE
Confidence            356899999999  9999999999999999988

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=91.46  E-value=0.42  Score=48.02  Aligned_cols=83  Identities=16%  Similarity=0.157  Sum_probs=54.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC-cEEEe--cch-------hhHHHHHhhCccccccceeeec-cccc--CcceEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICK-------DDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL  420 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~-------~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi  420 (529)
                      .+|.++|. |  .+|+++|+.|.+.| .+|++  |++       +..+.+++.   +     + .+ +.++  ++++++|
T Consensus        25 m~IgvIG~-G--~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~---g-----~-~~~s~~e~~~~aDvVi   92 (317)
T 4ezb_A           25 TTIAFIGF-G--EAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL---G-----V-EPLDDVAGIACADVVL   92 (317)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT---T-----C-EEESSGGGGGGCSEEE
T ss_pred             CeEEEECc-c--HHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC---C-----C-CCCCHHHHHhcCCEEE
Confidence            57999995 5  99999999999999 99998  665       233333322   1     1 33 4543  5676655


Q ss_pred             --EcCcCChh---h-hhcCCCCceeecccccCcc
Q 009674          421 --VGDDLTGK---E-QARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       421 --vg~~~~~~---~-q~~a~~G~~f~~~~~~~~~  448 (529)
                        |.+....+   + ...+++|+++++.|.++|.
T Consensus        93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~  126 (317)
T 4ezb_A           93 SLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPD  126 (317)
T ss_dssp             ECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHH
T ss_pred             EecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHH
Confidence              32222211   1 2246899999999988776

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=91.40  E-value=0.24  Score=51.01  Aligned_cols=81  Identities=15%  Similarity=0.208  Sum_probs=56.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      ..++|-++|- |  .||+++|+.|...|.+|+.  |+....+..   ....      .+.++++  +.++++++      
T Consensus       172 ~gktvGIIGl-G--~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---~g~~------~~~~l~ell~~sDvV~l~~Plt~  239 (345)
T 4g2n_A          172 TGRRLGIFGM-G--RIGRAIATRARGFGLAIHYHNRTRLSHALE---EGAI------YHDTLDSLLGASDIFLIAAPGRP  239 (345)
T ss_dssp             TTCEEEEESC-S--HHHHHHHHHHHTTTCEEEEECSSCCCHHHH---TTCE------ECSSHHHHHHTCSEEEECSCCCG
T ss_pred             CCCEEEEEEe-C--hhHHHHHHHHHHCCCEEEEECCCCcchhhh---cCCe------EeCCHHHHHhhCCEEEEecCCCH
Confidence            3568999996 5  9999999999999999998  433222211   1111      1235554  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                        -..++.+....||+|+++|.++|
T Consensus       240 ~T~~li~~~~l~~mk~gailIN~aR  264 (345)
T 4g2n_A          240 ELKGFLDHDRIAKIPEGAVVINISR  264 (345)
T ss_dssp             GGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             HHHHHhCHHHHhhCCCCcEEEECCC
Confidence              24467888899999999999998

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=91.40  E-value=0.16  Score=49.66  Aligned_cols=29  Identities=17%  Similarity=0.342  Sum_probs=27.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+|+|++|  -||+++++.|.++|.+|..
T Consensus         2 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~   30 (330)
T 2c20_A            2 NSILICGGAG--YIGSHAVKKLVDEGLSVVV   30 (330)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHhCCCEEEE
Confidence            4699999999  9999999999999999988

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=91.40  E-value=0.28  Score=49.49  Aligned_cols=34  Identities=18%  Similarity=0.245  Sum_probs=29.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKD  388 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~  388 (529)
                      ..+|+|+||||  -||+++++.|.++| .+|..  |+.+
T Consensus        32 ~~~ilVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (377)
T 2q1s_A           32 NTNVMVVGGAG--FVGSNLVKRLLELGVNQVHVVDNLLS   68 (377)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHcCCceEEEEECCCC
Confidence            35799999999  99999999999999 88887  5443

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=91.39  E-value=0.28  Score=50.39  Aligned_cols=91  Identities=14%  Similarity=0.089  Sum_probs=60.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Ccccc--c----cceeeec-cccc--CcceEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEA--Q----HNLVLST-SYAA--HKTKIW  419 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~~~--~----~~l~~~~-~~~~--~~~~vw  419 (529)
                      ...+|.++|+ |  .+|.++|..|++.|.+|++  |++++.+.++++ .+..+  +    .+ +..+ ++++  ++++++
T Consensus        28 ~~mkI~VIGa-G--~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~-i~~t~d~~ea~~~aDvV  103 (356)
T 3k96_A           28 FKHPIAILGA-G--SWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPET-LKAYCDLKASLEGVTDI  103 (356)
T ss_dssp             CCSCEEEECC-S--HHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTT-EEEESCHHHHHTTCCEE
T ss_pred             cCCeEEEECc-c--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCC-eEEECCHHHHHhcCCEE
Confidence            3458999998 4  9999999999999999999  888999999876 22111  1    12 3333 6753  677776


Q ss_pred             EEc-------CcCChhhhhcCCCCceeecccc-cCc
Q 009674          420 LVG-------DDLTGKEQARAPKGTIFIPYTQ-IPP  447 (529)
Q Consensus       420 ivg-------~~~~~~~q~~a~~G~~f~~~~~-~~~  447 (529)
                      |+-       +.++. =....++|++++..+. +++
T Consensus       104 ilaVp~~~~~~vl~~-i~~~l~~~~ivvs~~kGi~~  138 (356)
T 3k96_A          104 LIVVPSFAFHEVITR-MKPLIDAKTRIAWGTKGLAK  138 (356)
T ss_dssp             EECCCHHHHHHHHHH-HGGGCCTTCEEEECCCSCBT
T ss_pred             EECCCHHHHHHHHHH-HHHhcCCCCEEEEEeCCCCc
Confidence            631       11110 0123678998888766 554

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=91.27  E-value=0.16  Score=47.62  Aligned_cols=30  Identities=13%  Similarity=0.118  Sum_probs=28.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         6 ~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~   35 (223)
T 3uce_A            6 KTVYVVLGGTS--GIGAELAKQLESEHTIVHV   35 (223)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHCSTTEEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            46789999998  9999999999999999998

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=91.27  E-value=0.14  Score=49.66  Aligned_cols=35  Identities=23%  Similarity=0.342  Sum_probs=30.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         8 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~   44 (264)
T 2dtx_A            8 DKVVIVTGASM--GIGRAIAERFVDEGSKVIDLSIHDPG   44 (264)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEecCccc
Confidence            46799999998  9999999999999999988  65543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=91.26  E-value=0.1  Score=51.55  Aligned_cols=35  Identities=23%  Similarity=0.348  Sum_probs=28.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      ..+.|+|+||||  -||+++|+.|.++|.+|..  |+.+
T Consensus        18 ~~~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~   54 (347)
T 4id9_A           18 GSHMILVTGSAG--RVGRAVVAALRTQGRTVRGFDLRPS   54 (347)
T ss_dssp             ---CEEEETTTS--HHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            467899999999  9999999999999999988  5543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=91.23  E-value=0.15  Score=49.67  Aligned_cols=29  Identities=21%  Similarity=0.224  Sum_probs=27.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+|+|+||  -||+++++.|.++|.+|..
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   31 (315)
T 2ydy_A            3 RRVLVTGATG--LLGRAVHKEFQQNNWHAVG   31 (315)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHTTTCEEEE
T ss_pred             CeEEEECCCc--HHHHHHHHHHHhCCCeEEE
Confidence            5799999999  9999999999999999988

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=91.21  E-value=0.13  Score=52.55  Aligned_cols=81  Identities=14%  Similarity=0.173  Sum_probs=57.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      ..++|.++|--   .||+++|+.|...|.+|+.  |+.++.+.    +...     ....++++  +++|++++      
T Consensus       136 ~gktvGIiGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----~~~~-----~~~~~l~ell~~aDvV~l~lPlt~  203 (324)
T 3evt_A          136 TGQQLLIYGTG---QIGQSLAAKASALGMHVIGVNTTGHPADH----FHET-----VAFTATADALATANFIVNALPLTP  203 (324)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEEESSCCCCTT----CSEE-----EEGGGCHHHHHHCSEEEECCCCCG
T ss_pred             cCCeEEEECcC---HHHHHHHHHHHhCCCEEEEECCCcchhHh----Hhhc-----cccCCHHHHHhhCCEEEEcCCCch
Confidence            35689999976   9999999999999999998  44332211    1111     12335654  56777552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                        -..++.+....|++|++++.+++
T Consensus       204 ~t~~li~~~~l~~mk~gailIN~aR  228 (324)
T 3evt_A          204 TTHHLFSTELFQQTKQQPMLINIGR  228 (324)
T ss_dssp             GGTTCBSHHHHHTCCSCCEEEECSC
T ss_pred             HHHHhcCHHHHhcCCCCCEEEEcCC
Confidence              34567788889999999999998

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=91.19  E-value=0.14  Score=46.71  Aligned_cols=35  Identities=17%  Similarity=0.101  Sum_probs=30.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDD  389 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~  389 (529)
                      .++|+|+|++|  -||+++++.|.++|.  +|..  |++++
T Consensus         5 ~~~vlVtGatG--~iG~~l~~~l~~~g~~~~V~~~~r~~~~   43 (215)
T 2a35_A            5 PKRVLLAGATG--LTGEHLLDRILSEPTLAKVIAPARKALA   43 (215)
T ss_dssp             CCEEEEECTTS--HHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred             CceEEEECCCc--HHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence            35799999999  999999999999998  8888  66554

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=91.17  E-value=0.15  Score=48.66  Aligned_cols=34  Identities=21%  Similarity=0.228  Sum_probs=30.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         7 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~   42 (250)
T 2fwm_X            7 GKNVWVTGAGK--GIGYATALAFVEAGAKVTGFDQAFT   42 (250)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCchh
Confidence            46799999998  9999999999999999988  6544

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=91.16  E-value=0.26  Score=48.15  Aligned_cols=84  Identities=12%  Similarity=0.188  Sum_probs=57.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--cCcCCh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDLTG  427 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~~~  427 (529)
                      .+|.++|+ |  .+|+++|+.|.+.|.+|.+  |++++.+.++++ +  .    ...+++++  ++++++|+  .+.-.-
T Consensus         5 ~~i~iiG~-G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g--~----~~~~~~~~~~~~~D~vi~~vp~~~~~   74 (301)
T 3cky_A            5 IKIGFIGL-G--AMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ-G--A----QACENNQKVAAASDIIFTSLPNAGIV   74 (301)
T ss_dssp             CEEEEECC-C--TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT-T--C----EECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             CEEEEECc-c--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-C--C----eecCCHHHHHhCCCEEEEECCCHHHH
Confidence            57999995 6  9999999999999999988  888888888765 1  0    11225543  56677653  111100


Q ss_pred             h-------hh-hcCCCCceeecccccCc
Q 009674          428 K-------EQ-ARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       428 ~-------~q-~~a~~G~~f~~~~~~~~  447 (529)
                      +       +. ..+++|+++++.+...|
T Consensus        75 ~~v~~~~~~l~~~l~~~~~vv~~~~~~~  102 (301)
T 3cky_A           75 ETVMNGPGGVLSACKAGTVIVDMSSVSP  102 (301)
T ss_dssp             HHHHHSTTCHHHHSCTTCEEEECCCCCH
T ss_pred             HHHHcCcchHhhcCCCCCEEEECCCCCH
Confidence            1       11 24688999999887654

>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}

Probab=91.14  E-value=0.96  Score=46.67  Aligned_cols=161  Identities=16%  Similarity=0.183  Sum_probs=93.2

Q ss_pred             HHHcCCcEEEecc----cccccccc-------cCCceeeecCCC---------CcceeeecCCh---h------HHHHHH
Q 009674          296 ADAKGVKVISLGL----LNQGEELN-------RNGEIYLERQPN---------KLKIKVVDGSS---L------AAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~----ln~~e~ln-------~~g~~~~~k~p~---------~L~irvv~Gns---l------taavv~  346 (529)
                      +.++|.+++.|+.    +.++|.+-       ...-..+.|+|.         ..+++|+.|-+   |      =..++.
T Consensus        92 ~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~  171 (340)
T 4ep1_A           92 MVQLGGHGMFLNGKEMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIY  171 (340)
T ss_dssp             HHHTTCEEEEEESCC------CCTTHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence            4579999999975    44555543       334467778875         34577886544   1      144555


Q ss_pred             hcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeec-cccc--Cc
Q 009674          347 NSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYAA--HK  415 (529)
Q Consensus       347 ~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~~-~~~~--~~  415 (529)
                      +... -+..+|+++|..+  -+++..+.+|++-|.++.+-.++.|       +.+++ ...+.+.. +.++ ++++  ++
T Consensus       172 E~~G~l~glkva~vGD~~--nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~-~a~~~G~~-v~~~~d~~eav~~  247 (340)
T 4ep1_A          172 EETNTFKGIKLAYVGDGN--NVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALA-IAKETGAE-IEILHNPELAVNE  247 (340)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHH-HHHHHCCC-EEEESCHHHHHTT
T ss_pred             HHhCCCCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHH-HHHHcCCe-EEEECCHHHHhCC
Confidence            5543 2567899999985  7999999999999999998222222       22221 11222333 3445 7774  88


Q ss_pred             ceEEEEcCcCChhhhhcCCCCceeecccccCcc---CCCCCce-eecCCc
Q 009674          416 TKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  461 (529)
Q Consensus       416 ~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a  461 (529)
                      ++|+..+-|.+..+......=..|-+| |++++   ..++|+. .+.+|+
T Consensus       248 aDVvyt~~w~smg~e~~~~~~~~~~~y-~vt~ell~~ak~dai~MHcLPa  296 (340)
T 4ep1_A          248 ADFIYTDVWMSMGQEGEEEKYTLFQPY-QINKELVKHAKQTYHFLHCLPA  296 (340)
T ss_dssp             CSEEEECCC------CHHHHHHHHGGG-CBCHHHHTTSCTTCEEEECSCC
T ss_pred             CCEEEecCccCCCCCchHHHHHHhccc-cCCHHHHHhcCCCcEEECCCCC
Confidence            898887666553211000000123344 48877   4557876 677775

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=91.05  E-value=0.24  Score=50.73  Aligned_cols=86  Identities=15%  Similarity=0.104  Sum_probs=59.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----  421 (529)
                      ..++|.++|. |  .||+++|+.|. ..|.+|+.  ++.++.+..++. +..      ...++++  ++++++++     
T Consensus       162 ~g~~vgIIG~-G--~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~-g~~------~~~~l~ell~~aDvVil~vp~~  231 (348)
T 2w2k_A          162 RGHVLGAVGL-G--AIQKEIARKAVHGLGMKLVYYDVAPADAETEKAL-GAE------RVDSLEELARRSDCVSVSVPYM  231 (348)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-TCE------ECSSHHHHHHHCSEEEECCCCS
T ss_pred             CCCEEEEEEE-C--HHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhc-CcE------EeCCHHHHhccCCEEEEeCCCC
Confidence            3568999996 5  99999999999 99999988  555544433221 111      1224543  56677552     


Q ss_pred             ---cCcCChhhhhcCCCCceeecccccCc
Q 009674          422 ---GDDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       422 ---g~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                         ...++.+....+++|++++..++.++
T Consensus       232 ~~t~~li~~~~l~~mk~gailin~srg~~  260 (348)
T 2w2k_A          232 KLTHHLIDEAFFAAMKPGSRIVNTARGPV  260 (348)
T ss_dssp             GGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             hHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence               24455667788999999999998544

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=91.04  E-value=0.17  Score=53.39  Aligned_cols=36  Identities=17%  Similarity=0.166  Sum_probs=31.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc---CcEEEe--cchhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQM---GIKVAT--ICKDD  389 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~---~~~v~l--~~~~~  389 (529)
                      ..+.|+|+||||  -||+++|+.|.++   |.+|.+  |+++.
T Consensus        72 ~~~~VLVTGatG--~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~  112 (478)
T 4dqv_A           72 ELRTVLLTGATG--FLGRYLVLELLRRLDVDGRLICLVRAESD  112 (478)
T ss_dssp             CCCEEEEECTTS--HHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence            567999999999  9999999999988   889988  66543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=91.02  E-value=0.23  Score=53.07  Aligned_cols=44  Identities=20%  Similarity=0.218  Sum_probs=34.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchh---hHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKD---DYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~---~~~~l~~~~  397 (529)
                      ..+.|+++|++|  -||+++|++|.++|.+ |.+  |+.+   +.+++.+++
T Consensus       225 ~~~~vLITGgtG--gIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l  274 (486)
T 2fr1_A          225 PTGTVLVTGGTG--GVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAEL  274 (486)
T ss_dssp             CCSEEEEETTTS--HHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHH
Confidence            457899999999  9999999999999985 666  6654   445555443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=90.98  E-value=0.26  Score=48.66  Aligned_cols=84  Identities=11%  Similarity=0.180  Sum_probs=56.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc---EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcCC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI---KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT  426 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~---~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~  426 (529)
                      .+|.++|+ |  .+|+++|+.|.+.|.   +|.+  |++++.++++++.+...      .++.++  ++++++|+--  .
T Consensus         4 ~~I~iIG~-G--~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~------~~~~~~~~~~aDvVilav--~   72 (280)
T 3tri_A            4 SNITFIGG-G--NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHT------TQDNRQGALNADVVVLAV--K   72 (280)
T ss_dssp             SCEEEESC-S--HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEE------ESCHHHHHSSCSEEEECS--C
T ss_pred             CEEEEEcc-c--HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEE------eCChHHHHhcCCeEEEEe--C
Confidence            46899999 5  999999999999998   8888  89999999988743211      224443  6777766311  1


Q ss_pred             hh-------hhhc--CCCCceeecccc-cCcc
Q 009674          427 GK-------EQAR--APKGTIFIPYTQ-IPPR  448 (529)
Q Consensus       427 ~~-------~q~~--a~~G~~f~~~~~-~~~~  448 (529)
                      |.       +...  .+++++++..+- ++..
T Consensus        73 p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~  104 (280)
T 3tri_A           73 PHQIKMVCEELKDILSETKILVISLAVGVTTP  104 (280)
T ss_dssp             GGGHHHHHHHHHHHHHTTTCEEEECCTTCCHH
T ss_pred             HHHHHHHHHHHHhhccCCCeEEEEecCCCCHH
Confidence            21       1111  477777776543 5544

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=90.98  E-value=0.39  Score=47.94  Aligned_cols=58  Identities=21%  Similarity=0.179  Sum_probs=44.7

Q ss_pred             hHHHHHHhc-C-cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          340 LAAAVVVNS-L-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       340 ltaavv~~~-i-~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .||+-.+.. . .+..+.|+++|++|  -||.++++.+...|.+|..  +++++++.++++++.
T Consensus       141 ~ta~~al~~~~~~~~g~~vlI~Ga~g--~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~  202 (345)
T 2j3h_A          141 MTAYAGFYEVCSPKEGETVYVSAASG--AVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF  202 (345)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence            355555532 2 23456899999998  9999999999999999887  888999988766554

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=90.97  E-value=0.19  Score=53.32  Aligned_cols=111  Identities=16%  Similarity=0.265  Sum_probs=71.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhh-Ccc-cc----------ccceeeeccccc--Cc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLR-IPV-EA----------QHNLVLSTSYAA--HK  415 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~--~~~v~l--~~~~~~~~l~~~-~~~-~~----------~~~l~~~~~~~~--~~  415 (529)
                      .+|.++|. |  .+|.++|..|++.  |.+|++  +++++.+.+++. .+. +.          ...+...+++++  ++
T Consensus         6 mkI~VIG~-G--~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~   82 (467)
T 2q3e_A            6 KKICCIGA-G--YVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE   82 (467)
T ss_dssp             CEEEEECC-S--TTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred             cEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc
Confidence            47999995 5  9999999999988  899988  889999988764 111 00          012222336653  56


Q ss_pred             ceEEE--EcCcCCh------------------hhhh-cCCCCceeecccccCccC---C--------C--CCceeecCCc
Q 009674          416 TKIWL--VGDDLTG------------------KEQA-RAPKGTIFIPYTQIPPRK---L--------R--KDCFYHSTPA  461 (529)
Q Consensus       416 ~~vwi--vg~~~~~------------------~~q~-~a~~G~~f~~~~~~~~~~---~--------R--~dc~y~~~~a  461 (529)
                      ++++|  |++..+.                  ++.. .+++|+++++.|.++|..   +        +  .|+.+..+|.
T Consensus        83 aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe  162 (467)
T 2q3e_A           83 ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPE  162 (467)
T ss_dssp             CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCC
T ss_pred             CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHH
Confidence            76655  5444432                  1222 368999999998888751   1        1  3555556665


Q ss_pred             cccCCC
Q 009674          462 MIIPPS  467 (529)
Q Consensus       462 ~~~P~~  467 (529)
                      ..-|+.
T Consensus       163 ~~~~G~  168 (467)
T 2q3e_A          163 FLAEGT  168 (467)
T ss_dssp             CCCTTS
T ss_pred             Hhhccc
Confidence            555554

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=90.96  E-value=0.18  Score=47.76  Aligned_cols=43  Identities=12%  Similarity=0.105  Sum_probs=36.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~  398 (529)
                      ..+|.++| +|  .+|+++|+.|.+.|.+|++   |++++.++++++.+
T Consensus        23 mmkI~IIG-~G--~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g   68 (220)
T 4huj_A           23 MTTYAIIG-AG--AIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFG   68 (220)
T ss_dssp             SCCEEEEE-CH--HHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHT
T ss_pred             CCEEEEEC-CC--HHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhC
Confidence            35799999 56  9999999999999998887   88899999887643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=90.88  E-value=0.17  Score=48.80  Aligned_cols=32  Identities=13%  Similarity=0.283  Sum_probs=28.4

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +-.++|+|+|+||  -||+++++.|.++|.+|..
T Consensus        10 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   41 (292)
T 1vl0_A           10 HHHMKILITGANG--QLGREIQKQLKGKNVEVIP   41 (292)
T ss_dssp             --CEEEEEESTTS--HHHHHHHHHHTTSSEEEEE
T ss_pred             cccceEEEECCCC--hHHHHHHHHHHhCCCeEEe
Confidence            3467999999999  9999999999999999987

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=90.83  E-value=0.14  Score=50.18  Aligned_cols=36  Identities=22%  Similarity=0.256  Sum_probs=31.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHH
Q 009674          355 HVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEK  392 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~  392 (529)
                      +|+|+|+||  -||+++++.|.++ |.+|..  |+.++.+.
T Consensus         2 ~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~   40 (345)
T 2bll_A            2 RVLILGVNG--FIGNHLTERLLREDHYEVYGLDIGSDAISR   40 (345)
T ss_dssp             EEEEETCSS--HHHHHHHHHHHHSTTCEEEEEESCCGGGGG
T ss_pred             eEEEECCCc--HHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Confidence            699999999  9999999999987 899887  77666543

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=90.82  E-value=0.32  Score=48.79  Aligned_cols=65  Identities=14%  Similarity=0.248  Sum_probs=44.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CcceEEEE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      ..+|.++|+ |  .+|+++|..|++.|. +|.+  +++++++.+..++...     .... +.. +++++ ++++++|.
T Consensus         4 ~~kI~VIGa-G--~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~a~~~aDiVi~   78 (317)
T 2ewd_A            4 RRKIAVIGS-G--QIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSK-VIGTDDYADISGSDVVII   78 (317)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcE-EEECCCHHHhCCCCEEEE
Confidence            357999999 7  999999999999998 8888  7777777543222111     1112 333 47765 78887663

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=90.80  E-value=0.16  Score=49.20  Aligned_cols=34  Identities=18%  Similarity=0.248  Sum_probs=30.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      .++|+|+|+||  -||+++++.|.++|.+|..  |+.+
T Consensus         7 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAG--FIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCC--hHHHHHHHHHHHCCCEEEEEecCCc
Confidence            46899999999  9999999999999999988  5443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=90.80  E-value=0.21  Score=49.29  Aligned_cols=29  Identities=7%  Similarity=0.225  Sum_probs=26.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhcc--CcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQM--GIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~--~~~v~l  384 (529)
                      ++|+|+|++|  -||+++++.|.++  |.+|..
T Consensus         5 ~~vlVTGatG--~iG~~l~~~L~~~~~g~~V~~   35 (348)
T 1oc2_A            5 KNIIVTGGAG--FIGSNFVHYVYNNHPDVHVTV   35 (348)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHHCTTCEEEE
T ss_pred             cEEEEeCCcc--HHHHHHHHHHHHhCCCCEEEE
Confidence            5799999999  9999999999988  888887

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=90.73  E-value=0.4  Score=48.63  Aligned_cols=64  Identities=19%  Similarity=0.276  Sum_probs=45.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      .+|.++|| |  .+|.++|..|++.|. +|.|  +++++++.....+...     .... +.. +++++ ++++++|.
T Consensus         5 ~kI~VIGa-G--~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~-i~~t~d~~al~~aD~Vi~   78 (322)
T 1t2d_A            5 AKIVLVGS-G--MIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK-VSGSNTYDDLAGADVVIV   78 (322)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCC-EEEECCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcE-EEECCCHHHhCCCCEEEE
Confidence            57999999 8  999999999998888 8777  7777777544443221     1112 334 47766 88888663

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=90.69  E-value=0.41  Score=47.07  Aligned_cols=30  Identities=27%  Similarity=0.389  Sum_probs=27.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      -+.++|+|+++  -||+|+|+.|+++|-+|.+
T Consensus         9 GKvalVTGas~--GIG~aiA~~la~~Ga~Vvi   38 (247)
T 4hp8_A            9 GRKALVTGANT--GLGQAIAVGLAAAGAEVVC   38 (247)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCcCC--HHHHHHHHHHHHcCCEEEE
Confidence            46789999997  9999999999999999999

>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=90.66  E-value=0.97  Score=46.02  Aligned_cols=159  Identities=13%  Similarity=0.125  Sum_probs=97.6

Q ss_pred             HHHcCCcEEEecc----cccccccc-------cCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGL----LNQGEELN-------RNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~----ln~~e~ln-------~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++.|+.    ++++|.+-       ...-..+.|+|.         ..+++|+.|-+         +=..++.
T Consensus        67 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~  146 (309)
T 4f2g_A           67 IFQLGGHAVFMSTRDTQLGRGEPVEDSAQVISRMVDIIMIRTFEQDIIQRFAENSRVPVINGLTNEYHPCQVLADIFTYY  146 (309)
T ss_dssp             HHHTTCEEEEECCSSCEETBEECHHHHHHHHHHHCSEEEEECSCHHHHHHHHHTCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCCHHHHHHHHHhCCCCEEECCCCccCcHHHHHHHHHHH
Confidence            4579999999986    45555543       344567778876         35678887643         1145666


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhh-Cccccccceeeec-cccc--CcceEEEE
Q 009674          347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLR-IPVEAQHNLVLST-SYAA--HKTKIWLV  421 (529)
Q Consensus       347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~-~~~~~~~~l~~~~-~~~~--~~~~vwiv  421 (529)
                      +.... +..+|+++|..+  -+++..+.+|++-|.++.+-.++.|+- .++ +.++.+.. +.++ +.++  ++++|+..
T Consensus       147 e~~g~l~glkva~vGD~~--~va~Sl~~~~~~~G~~v~~~~P~~~~~-~~~~~~~~~g~~-v~~~~d~~eav~~aDvvyt  222 (309)
T 4f2g_A          147 EHRGPIRGKTVAWVGDAN--NMLYTWIQAARILDFKLQLSTPPGYAL-DAKLVDAESAPF-YQVFDDPNEACKGADLVTT  222 (309)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHHTCEEEEECCGGGCC-CGGGSCGGGGGG-EEECSSHHHHTTTCSEEEE
T ss_pred             HHhCCCCCCEEEEECCCc--chHHHHHHHHHHcCCEEEEECCcccCC-CHHHHHHHcCCe-EEEEcCHHHHhcCCCEEEe
Confidence            65443 466899999975  899999999999999999955555541 111 12223333 4445 7774  78888777


Q ss_pred             cCcCCh---hhhhcCCCCceeecccccCcc---CCCCCce-eecCCc
Q 009674          422 GDDLTG---KEQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  461 (529)
Q Consensus       422 g~~~~~---~~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a  461 (529)
                      +-|.+-   +||..  .=..|-+| |++++   ..++|+. .|.+|+
T Consensus       223 ~~w~smg~e~~~~~--r~~~~~~y-~v~~~~l~~a~~~ai~mH~lP~  266 (309)
T 4f2g_A          223 DVWTSMGFEAENEA--RKRAFADW-CVDEEMMSHANSDALFMHCLPA  266 (309)
T ss_dssp             CCC--------------CCSGGGG-CBCHHHHTTSCTTCEEEECSSC
T ss_pred             cccccCcchhhHHH--HHHHhcCc-eeCHHHHHhcCCCeEEECCCCC
Confidence            554331   22211  11234455 38887   4567876 677775

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=90.60  E-value=0.92  Score=48.13  Aligned_cols=86  Identities=17%  Similarity=0.179  Sum_probs=56.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc--------------ccccceeeec-cccc-C
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--------------EAQHNLVLST-SYAA-H  414 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~--------------~~~~~l~~~~-~~~~-~  414 (529)
                      -++|.|+|+-   .+|+++|..|++.|.+|++  ++++++++.++.+..              +....+..++ ++++ +
T Consensus        37 ~~kV~VIGaG---~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~  113 (463)
T 1zcj_A           37 VSSVGVLGLG---TMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELS  113 (463)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGGT
T ss_pred             CCEEEEECcC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHHC
Confidence            4579999984   9999999999999999999  788888776553211              0111122344 7765 7


Q ss_pred             cceEEE--EcCcCChhh-----h-hcCCCCceeec
Q 009674          415 KTKIWL--VGDDLTGKE-----Q-ARAPKGTIFIP  441 (529)
Q Consensus       415 ~~~vwi--vg~~~~~~~-----q-~~a~~G~~f~~  441 (529)
                      +++++|  |.+.++-++     . ..+++|++++.
T Consensus       114 ~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s  148 (463)
T 1zcj_A          114 TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT  148 (463)
T ss_dssp             TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence            887766  433221111     1 24688999886

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=90.56  E-value=0.33  Score=49.93  Aligned_cols=78  Identities=12%  Similarity=0.083  Sum_probs=54.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      ..++|.++|.-   .||+++|+.|...|.+|..  |++++      ....      ....++++  +.++++++      
T Consensus       170 ~gktiGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~------~~~~------~~~~sl~ell~~aDvVil~vP~t~  234 (340)
T 4dgs_A          170 KGKRIGVLGLG---QIGRALASRAEAFGMSVRYWNRSTLS------GVDW------IAHQSPVDLARDSDVLAVCVAASA  234 (340)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSSCCT------TSCC------EECSSHHHHHHTCSEEEECC----
T ss_pred             cCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCccc------ccCc------eecCCHHHHHhcCCEEEEeCCCCH
Confidence            35689999985   9999999999999999988  44332      1111      11335554  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                        -..++.+....+++|++++.+++
T Consensus       235 ~t~~li~~~~l~~mk~gailIN~aR  259 (340)
T 4dgs_A          235 ATQNIVDASLLQALGPEGIVVNVAR  259 (340)
T ss_dssp             ------CHHHHHHTTTTCEEEECSC
T ss_pred             HHHHHhhHHHHhcCCCCCEEEECCC
Confidence              24467788889999999999998

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=90.55  E-value=0.49  Score=44.71  Aligned_cols=38  Identities=13%  Similarity=0.085  Sum_probs=32.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      ..+|+++|+ |  .+|+.+|+.|.+.|. |++  +++++.+.++
T Consensus         9 ~~~viI~G~-G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~   48 (234)
T 2aef_A            9 SRHVVICGW-S--ESTLECLRELRGSEV-FVLAEDENVRKKVLR   48 (234)
T ss_dssp             -CEEEEESC-C--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH
T ss_pred             CCEEEEECC-C--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh
Confidence            568999998 6  999999999999898 777  8888888776

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=90.52  E-value=0.29  Score=52.08  Aligned_cols=66  Identities=11%  Similarity=0.171  Sum_probs=47.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc-ccceeeecccc-c--CcceEEEE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-QHNLVLSTSYA-A--HKTKIWLV  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~-~~~l~~~~~~~-~--~~~~vwiv  421 (529)
                      +-+|.++|+.   ++|+.+|+.|.++|..|++  +++++++++++++.... ..+-....-++ +  .++++.|+
T Consensus         3 ~M~iiI~G~G---~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            3 AMKIIILGAG---QVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             CEEEEEECCS---HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred             cCEEEEECCC---HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence            4479999996   9999999999999999999  89999999988754221 11100111334 2  67777775

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=90.52  E-value=0.26  Score=48.83  Aligned_cols=28  Identities=18%  Similarity=0.261  Sum_probs=25.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQM-GIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~-~~~v~l  384 (529)
                      +|+|+|++|  -||+++|+.|.++ |.+|..
T Consensus         2 kvlVTGasG--~iG~~l~~~L~~~~g~~V~~   30 (361)
T 1kew_A            2 KILITGGAG--FIGSAVVRHIIKNTQDTVVN   30 (361)
T ss_dssp             EEEEESTTS--HHHHHHHHHHHHHCSCEEEE
T ss_pred             EEEEECCCc--hHhHHHHHHHHhcCCCeEEE
Confidence            589999999  9999999999987 788887

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=90.49  E-value=0.18  Score=48.98  Aligned_cols=33  Identities=12%  Similarity=0.305  Sum_probs=29.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      +|+|+|+||  -||+++++.|.++|.+|..  |+.++
T Consensus         2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (312)
T 3ko8_A            2 RIVVTGGAG--FIGSHLVDKLVELGYEVVVVDNLSSG   36 (312)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEECCCSSC
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence            699999999  9999999999999999988  54443

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=90.49  E-value=0.75  Score=44.58  Aligned_cols=86  Identities=17%  Similarity=0.118  Sum_probs=55.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccccceeeeccccc--C-cceEEEEcC--c
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--H-KTKIWLVGD--D  424 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~-~~~vwivg~--~  424 (529)
                      .+|.++| .|  .+|+++|+.|.+.|.  +|.+  +++++.+.+++. +...    ...+++++  + +++++|+--  .
T Consensus         2 ~~I~iIG-~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~~----~~~~~~~~~~~~~aDvVilavp~~   73 (281)
T 2g5c_A            2 QNVLIVG-VG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GIID----EGTTSIAKVEDFSPDFVMLSSPVR   73 (281)
T ss_dssp             CEEEEES-CS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSCS----EEESCGGGGGGTCCSEEEECSCHH
T ss_pred             cEEEEEe-cC--HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-CCcc----cccCCHHHHhcCCCCEEEEcCCHH
Confidence            3689999 56  999999999999988  8887  788888877643 1110    01235543  6 777766311  1


Q ss_pred             CCh---hhh-hcCCCCceeecccccCc
Q 009674          425 LTG---KEQ-ARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       425 ~~~---~~q-~~a~~G~~f~~~~~~~~  447 (529)
                      ...   ++. ..+++|+++++.+.+++
T Consensus        74 ~~~~v~~~l~~~l~~~~iv~~~~~~~~  100 (281)
T 2g5c_A           74 TFREIAKKLSYILSEDATVTDQGSVKG  100 (281)
T ss_dssp             HHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred             HHHHHHHHHHhhCCCCcEEEECCCCcH
Confidence            100   011 23678999998876654

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=90.48  E-value=0.29  Score=52.45  Aligned_cols=91  Identities=14%  Similarity=0.126  Sum_probs=61.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Cc---ceEEEE--c
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWLV--G  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~---~~vwiv--g  422 (529)
                      .+++|.++|+-   .+|+++|+.|.+.|.+|.+  |++++.++++++.+.   ..+...+++++  ++   ++++|+  -
T Consensus        14 ~~~~IgvIGlG---~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~---~gi~~~~s~~e~v~~l~~aDvVil~Vp   87 (480)
T 2zyd_A           14 SKQQIGVVGMA---VMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPG---KKLVPYYTVKEFVESLETPRRILLMVK   87 (480)
T ss_dssp             -CBSEEEECCS---HHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTT---SCEEECSSHHHHHHTBCSSCEEEECSC
T ss_pred             CCCeEEEEccH---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCC---CCeEEeCCHHHHHhCCCCCCEEEEECC
Confidence            35679999976   9999999999999999998  889999999876531   12222235654  33   766552  1


Q ss_pred             C--cCCh--hhh-hcCCCCceeecccccCcc
Q 009674          423 D--DLTG--KEQ-ARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       423 ~--~~~~--~~q-~~a~~G~~f~~~~~~~~~  448 (529)
                      .  .+++  ++. ..+++|+++++.+...+.
T Consensus        88 ~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~  118 (480)
T 2zyd_A           88 AGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQ  118 (480)
T ss_dssp             SSSHHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred             CHHHHHHHHHHHHhhcCCCCEEEECCCCCHH
Confidence            1  1111  122 246789999999875543

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=90.38  E-value=0.59  Score=46.29  Aligned_cols=65  Identities=15%  Similarity=0.203  Sum_probs=42.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHH--HH--HhhCccccccceeeec-cccc-CcceEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE--KL--KLRIPVEAQHNLVLST-SYAA-HKTKIWL  420 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~--~l--~~~~~~~~~~~l~~~~-~~~~-~~~~vwi  420 (529)
                      ...+|.++|+ |  .+|.++|..|++.|.  +|++  +++++.+  .+  ++.+....... +..+ ++++ ++++++|
T Consensus         6 ~~mkI~IiGa-G--~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~aD~Vi   80 (319)
T 1lld_A            6 KPTKLAVIGA-G--AVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVS-IDGSDDPEICRDADMVV   80 (319)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCE-EEEESCGGGGTTCSEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeE-EEeCCCHHHhCCCCEEE
Confidence            3458999999 7  999999999999998  8888  7776765  22  22222111112 2233 5555 7777766

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=90.36  E-value=0.19  Score=53.33  Aligned_cols=38  Identities=16%  Similarity=0.099  Sum_probs=32.5

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhc-cCcEEEe--cchhhH
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT--ICKDDY  390 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~-~~~~v~l--~~~~~~  390 (529)
                      ++.+.|+|+|+++  =||+|+|+.|++ .|.+|.+  |++++.
T Consensus        59 ~~gKvaLVTGASs--GIG~AiA~~LA~~~GA~Vv~~~r~~~~~   99 (422)
T 3s8m_A           59 DGPKKVLVIGASS--GYGLASRITAAFGFGADTLGVFFEKPGT   99 (422)
T ss_dssp             SSCSEEEEESCSS--HHHHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred             cCCCEEEEECCCh--HHHHHHHHHHHHhCCCEEEEEeCCchhh
Confidence            4678899999997  999999999999 9999988  665543

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=90.32  E-value=0.2  Score=48.09  Aligned_cols=84  Identities=8%  Similarity=0.124  Sum_probs=53.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCcC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDL  425 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~----~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~  425 (529)
                      .+|.++|+ |  .+|+++|+.|.+.|.    +|.+  |++++.++++++.+..      ..++.++  ++++++|+--  
T Consensus         3 ~~i~iIG~-G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~------~~~~~~e~~~~aDvVilav--   71 (247)
T 3gt0_A            3 KQIGFIGC-G--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLT------TTTDNNEVAKNADILILSI--   71 (247)
T ss_dssp             CCEEEECC-S--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCE------ECSCHHHHHHHCSEEEECS--
T ss_pred             CeEEEECc-c--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCE------EeCChHHHHHhCCEEEEEe--
Confidence            46899994 5  999999999999998    8888  8899999987653221      1224443  5667766311  


Q ss_pred             Chh-------hh-hcCCCCceeecc-cccCcc
Q 009674          426 TGK-------EQ-ARAPKGTIFIPY-TQIPPR  448 (529)
Q Consensus       426 ~~~-------~q-~~a~~G~~f~~~-~~~~~~  448 (529)
                      .+.       +. ...++|++++.. +-++.+
T Consensus        72 ~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~  103 (247)
T 3gt0_A           72 KPDLYASIINEIKEIIKNDAIIVTIAAGKSIE  103 (247)
T ss_dssp             CTTTHHHHC---CCSSCTTCEEEECSCCSCHH
T ss_pred             CHHHHHHHHHHHHhhcCCCCEEEEecCCCCHH
Confidence            111       11 124678777743 335554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=90.28  E-value=0.18  Score=49.60  Aligned_cols=35  Identities=17%  Similarity=0.230  Sum_probs=30.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      +-+.++|+|+++  -||+|+|+.|+++|.+|.+  |+++
T Consensus        10 ~GK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~   46 (261)
T 4h15_A           10 RGKRALITAGTK--GAGAATVSLFLELGAQVLTTARARP   46 (261)
T ss_dssp             TTCEEEESCCSS--HHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             CCCEEEEeccCc--HHHHHHHHHHHHcCCEEEEEECCch
Confidence            356889999997  9999999999999999999  5443

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=90.28  E-value=0.21  Score=50.22  Aligned_cols=79  Identities=18%  Similarity=0.142  Sum_probs=56.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  421 (529)
                      .++|-++|--   .||+++|+.|...|.+|+.  |+.++.+.            .....++++  ++++++++       
T Consensus       122 g~tvGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------~~~~~~l~ell~~aDiV~l~~P~t~~  186 (290)
T 3gvx_A          122 GKALGILGYG---GIGRRVAHLAKAFGMRVIAYTRSSVDQNV------------DVISESPADLFRQSDFVLIAIPLTDK  186 (290)
T ss_dssp             TCEEEEECCS---HHHHHHHHHHHHHTCEEEEECSSCCCTTC------------SEECSSHHHHHHHCSEEEECCCCCTT
T ss_pred             cchheeeccC---chhHHHHHHHHhhCcEEEEEecccccccc------------ccccCChHHHhhccCeEEEEeecccc
Confidence            4689999975   9999999999999999998  44332210            012335554  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccccC
Q 009674          422 -GDDLTGKEQARAPKGTIFIPYTQIP  446 (529)
Q Consensus       422 -g~~~~~~~q~~a~~G~~f~~~~~~~  446 (529)
                       -..++.+....+++|++++++++-+
T Consensus       187 t~~li~~~~l~~mk~gailIN~aRG~  212 (290)
T 3gvx_A          187 TRGMVNSRLLANARKNLTIVNVARAD  212 (290)
T ss_dssp             TTTCBSHHHHTTCCTTCEEEECSCGG
T ss_pred             chhhhhHHHHhhhhcCceEEEeehhc
Confidence             2335677888999999999999844

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=90.27  E-value=0.25  Score=45.08  Aligned_cols=30  Identities=27%  Similarity=0.263  Sum_probs=27.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  387 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~  387 (529)
                      +|+|+|++|  -||+++|+.|. +|.+|.+  |++
T Consensus         5 ~vlVtGasg--~iG~~~~~~l~-~g~~V~~~~r~~   36 (202)
T 3d7l_A            5 KILLIGASG--TLGSAVKERLE-KKAEVITAGRHS   36 (202)
T ss_dssp             EEEEETTTS--HHHHHHHHHHT-TTSEEEEEESSS
T ss_pred             EEEEEcCCc--HHHHHHHHHHH-CCCeEEEEecCc
Confidence            699999998  99999999999 9999998  554

>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}

Probab=90.22  E-value=1.2  Score=45.56  Aligned_cols=161  Identities=16%  Similarity=0.174  Sum_probs=93.3

Q ss_pred             HHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++.|+.    +.++|.+       ....-..+.|+|.         ..+|+|+.|-+         +=..++.
T Consensus        70 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~  149 (323)
T 3gd5_A           70 MYQLGGQVIDLSPSNTQVGRGEPVRDTARVLGRYVDGLAIRTFAQTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIR  149 (323)
T ss_dssp             HHHTTCEEEEC----------CCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEeCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence            4579999999974    4455544       4455577788876         23467776544         1144555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCccccccceeeec-cccc--Cc
Q 009674          347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYAA--HK  415 (529)
Q Consensus       347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~-------~~l~~~~~~~~~~~l~~~~-~~~~--~~  415 (529)
                      +.... +..+|+++|..+  -+++..+.+|++.|.++.+-.++.|       +..++ ...+.+.. +.++ +.++  ++
T Consensus       150 e~~g~l~glkva~vGD~~--rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~-~a~~~g~~-v~~~~d~~eav~~  225 (323)
T 3gd5_A          150 ENFGRLAGLKLAYVGDGN--NVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASE-IAGRTGAE-VQILRDPFEAARG  225 (323)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHH-HHHHHTCC-EEEESCHHHHHTT
T ss_pred             HHhCCCCCCEEEEECCCC--cHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHH-HHHHcCCe-EEEECCHHHHhcC
Confidence            55432 567999999985  9999999999999999998333322       22221 11222333 4444 7774  88


Q ss_pred             ceEEEEcCcCChhhhh-cCCCCceeecccccCcc---CCCCCce-eecCCc
Q 009674          416 TKIWLVGDDLTGKEQA-RAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  461 (529)
Q Consensus       416 ~~vwivg~~~~~~~q~-~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a  461 (529)
                      ++|+..+-|.+..+.. ....-..|-+| |++.+   ..++|+. .+.+|+
T Consensus       226 aDvvyt~~wqs~g~~~~~~~~~~~~~~y-~vt~ell~~ak~dai~mHclPa  275 (323)
T 3gd5_A          226 AHILYTDVWTSMGQEAETQHRLQLFEQY-QINAALLNCAAAEAIVLHCLPA  275 (323)
T ss_dssp             CSEEEECCCC---------CCHHHHTTC-CBCHHHHHTSCTTCEEEECSCC
T ss_pred             CCEEEEeceecCCCcccchHHHHHhhcc-CCCHHHHhhcCCCcEEECCCCC
Confidence            9998887776543221 11111233444 38877   4567876 677775

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=90.20  E-value=0.34  Score=49.28  Aligned_cols=64  Identities=14%  Similarity=0.195  Sum_probs=44.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      .+|.++|+ |  .+|+++|..|++.+. .+.+  +++++.+....++...     .... +.. +++++ ++++++|+
T Consensus         6 ~kI~iiGa-G--~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~-v~~t~d~~a~~~aDvVIi   79 (321)
T 3p7m_A            6 KKITLVGA-G--NIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFK-VRGTNDYKDLENSDVVIV   79 (321)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcE-EEEcCCHHHHCCCCEEEE
Confidence            57999996 7  999999999998888 7777  7777766443333221     1222 332 36766 88888664

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=90.11  E-value=0.3  Score=48.31  Aligned_cols=40  Identities=23%  Similarity=0.198  Sum_probs=34.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      -++|.++|+ |  .+|+++|..|++.|.+|++  +++++.++.++
T Consensus        15 ~~~I~VIG~-G--~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           15 VKHVTVIGG-G--LMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            357999999 5  9999999999999999999  88888776543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=90.08  E-value=0.19  Score=51.15  Aligned_cols=63  Identities=17%  Similarity=0.268  Sum_probs=42.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccc-----cccceeeec-cccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLST-SYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~~-~~~~-~~~~vwiv  421 (529)
                      +|.++|+ |  .||+++|..|++.+.  ++.+  +++++.+-...++...     ...+ +..+ ++++ ++++++|+
T Consensus         2 kv~ViGa-G--~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~-v~~~~~~~a~~~aDvVii   75 (314)
T 3nep_X            2 KVTVIGA-G--NVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTR-VTGTNDYGPTEDSDVCII   75 (314)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCE-EEEESSSGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcE-EEECCCHHHhCCCCEEEE
Confidence            6899997 8  999999999998887  7777  6777766433332221     1122 2223 6666 88988775

>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A

Probab=90.03  E-value=1.2  Score=45.36  Aligned_cols=163  Identities=17%  Similarity=0.178  Sum_probs=101.6

Q ss_pred             HHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 009674          296 ADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gnsl---------taavv~  346 (529)
                      +.++|.+++.|+.    ++++|.+       ....-..+.|+|.         ..+++|+.|-+-         =..++.
T Consensus        61 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  140 (307)
T 2i6u_A           61 IAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIA  140 (307)
T ss_dssp             HHHTTCEEEEEEGGGSGGGGTCCHHHHHHHHHHHEEEEEEECSSHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHhhCCCCEEcCCCCCcCccHHHHHHHHHH
Confidence            4579999999975    3344443       4445677888886         346888887651         134565


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH------HHHHhhCccccccceeeec-cccc--Ccc
Q 009674          347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY------EKLKLRIPVEAQHNLVLST-SYAA--HKT  416 (529)
Q Consensus       347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~------~~l~~~~~~~~~~~l~~~~-~~~~--~~~  416 (529)
                      +.... +..+|+++|.. .|-+++..+.+|++-|.+|.+-.++.|      .+..++...+.+.. +.++ +.++  +++
T Consensus       141 e~~g~l~gl~va~vGD~-~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~-~~~~~d~~eav~~a  218 (307)
T 2i6u_A          141 ERKGALRGLRLSYFGDG-ANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGAS-VTVTADAHAAAAGA  218 (307)
T ss_dssp             HHHSCCTTCEEEEESCT-TSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCC-EEEESCHHHHHTTC
T ss_pred             HHhCCcCCeEEEEECCC-CcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEECHHHHhcCC
Confidence            55432 45689999997 138999999999999999999333322      11112212223333 3344 7764  899


Q ss_pred             eEEEEcCcCChhhhhcCCCC-ceeecccccCcc---CCCCCce-eecCCc
Q 009674          417 KIWLVGDDLTGKEQARAPKG-TIFIPYTQIPPR---KLRKDCF-YHSTPA  461 (529)
Q Consensus       417 ~vwivg~~~~~~~q~~a~~G-~~f~~~~~~~~~---~~R~dc~-y~~~~a  461 (529)
                      +|+..+-|.+..++...+.- -.|-+| |++.+   ..++|+. .|.+|+
T Consensus       219 Dvvy~~~w~smg~~~~~~~~~~~~~~y-~v~~~~l~~a~~~ai~mH~lP~  267 (307)
T 2i6u_A          219 DVLVTDTWTSMGQENDGLDRVKPFRPF-QLNSRLLALADSDAIVLHCLPA  267 (307)
T ss_dssp             SEEEECCSSCTTCTTSCCCSSGGGGGG-CBCHHHHHHSCTTCEEEECSCC
T ss_pred             CEEEecceecCCcccchHHHHHHHhhc-CCCHHHHhhcCCCcEEECCCCC
Confidence            99998777765433222221 234455 38877   4567886 777885

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=89.93  E-value=0.15  Score=51.08  Aligned_cols=32  Identities=16%  Similarity=0.214  Sum_probs=26.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|+++.+-||+++|+.|+++|.+|.+
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~   33 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIF   33 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEE
Confidence            46789999873236999999999999999993

>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*

Probab=89.89  E-value=0.63  Score=48.93  Aligned_cols=96  Identities=10%  Similarity=0.197  Sum_probs=66.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc---EEEecchhhHHHHHhhCccccccceeeeccccc-CcceEEE----Ec--
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI---KVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWL----VG--  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~---~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwi----vg--  422 (529)
                      .++|+|.|++|  -+|...++.+.+-|.   +|+..+...-    .+ +..          +++ +++|++|    +|  
T Consensus       214 ~~kV~ViG~~G--~vG~~A~~~a~~lGa~~~~V~v~D~~~~----~~-g~~----------~~~i~~aDivIn~vlig~~  276 (394)
T 2qrj_A          214 KPTVLIIGALG--RCGSGAIDLLHKVGIPDANILKWDIKET----SR-GGP----------FDEIPQADIFINCIYLSKP  276 (394)
T ss_dssp             CCCEEEETTTS--HHHHHHHHHHHHTTCCGGGEEEECHHHH----TT-CSC----------CTHHHHSSEEEECCCCCSS
T ss_pred             CCeEEEEcCCC--HHHHHHHHHHHhCCCCcCceEEeecccc----cc-CCc----------hhhHhhCCEEEECcCcCCC
Confidence            56899999999  999999999999997   7888222110    00 110          122 3445555    22  


Q ss_pred             --CcCChhhhhcC-CCCceeecccccCcc------CCCCCceeecCCccccCC
Q 009674          423 --DDLTGKEQARA-PKGTIFIPYTQIPPR------KLRKDCFYHSTPAMIIPP  466 (529)
Q Consensus       423 --~~~~~~~q~~a-~~G~~f~~~~~~~~~------~~R~dc~y~~~~a~~~P~  466 (529)
                        ..+|.|+.++| +||+++||+| .++-      +....|+-++.|.....+
T Consensus       277 aP~Lvt~e~v~~m~k~gsVIVDVA-~D~GG~~et~~f~~~~Tt~~~P~~~~~g  328 (394)
T 2qrj_A          277 IAPFTNMEKLNNPNRRLRTVVDVS-ADTTNPHNPIPIYTVATVFNKPTVLVPT  328 (394)
T ss_dssp             CCCSCCHHHHCCTTCCCCEEEETT-CCTTCTTCSSCSCCCCCBTTBCCEEECC
T ss_pred             CCcccCHHHHhcCcCCCeEEEEEe-cCCCCCcCcccccccCCccCCCEEEECC
Confidence              34899999999 9999999999 7764      333347777777765554

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=89.87  E-value=0.42  Score=51.49  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=34.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchh---hHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD---DYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~---~~~~l~~~~  397 (529)
                      ..+.|+|+|++|  -||+++|++|+++|. +|.+  |+.+   +.+++.+++
T Consensus       258 ~~~~vLITGgtG--gIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l  307 (511)
T 2z5l_A          258 PSGTVLITGGMG--AIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEEL  307 (511)
T ss_dssp             CCSEEEEETTTS--HHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHH
Confidence            457899999998  999999999999998 4666  6553   345555543

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=89.83  E-value=0.47  Score=48.22  Aligned_cols=83  Identities=8%  Similarity=0.081  Sum_probs=56.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------  422 (529)
                      .++|.++|. |  .||+++|+.|...|.+|+.  |+.++ +..++. +       +...++++  ++++++++-      
T Consensus       150 g~~vgIIG~-G--~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~-g-------~~~~~l~~~l~~aDvVil~vp~~~~  217 (334)
T 2dbq_A          150 GKTIGIIGL-G--RIGQAIAKRAKGFNMRILYYSRTRKE-EVEREL-N-------AEFKPLEDLLRESDFVVLAVPLTRE  217 (334)
T ss_dssp             TCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHH-C-------CEECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCEEEEEcc-C--HHHHHHHHHHHhCCCEEEEECCCcch-hhHhhc-C-------cccCCHHHHHhhCCEEEECCCCChH
Confidence            457999996 6  9999999999999999998  55555 333221 1       11234543  566665521      


Q ss_pred             --CcCChhhhhcCCCCceeecccccCc
Q 009674          423 --DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       423 --~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                        ..++.+....+++|++++..++.++
T Consensus       218 t~~~i~~~~~~~mk~~ailIn~srg~~  244 (334)
T 2dbq_A          218 TYHLINEERLKLMKKTAILINIARGKV  244 (334)
T ss_dssp             TTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             HHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence              2344455678999999999998443

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=89.77  E-value=0.46  Score=47.85  Aligned_cols=82  Identities=10%  Similarity=0.126  Sum_probs=56.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc-----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-----  422 (529)
                      ..++|.++|. |  .||+++|+.|...|.+|..  ++.++ +.. .+.+.+       ..++++  +.++++++-     
T Consensus       141 ~g~~vgIiG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~-~~~g~~-------~~~l~ell~~aDvV~l~~p~~~  208 (307)
T 1wwk_A          141 EGKTIGIIGF-G--RIGYQVAKIANALGMNILLYDPYPNE-ERA-KEVNGK-------FVDLETLLKESDVVTIHVPLVE  208 (307)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCH-HHH-HHTTCE-------ECCHHHHHHHCSEEEECCCCST
T ss_pred             CCceEEEEcc-C--HHHHHHHHHHHHCCCEEEEECCCCCh-hhH-hhcCcc-------ccCHHHHHhhCCEEEEecCCCh
Confidence            3568999996 5  9999999999999999988  55544 322 222221       124443  566665532     


Q ss_pred             ---CcCChhhhhcCCCCceeeccccc
Q 009674          423 ---DDLTGKEQARAPKGTIFIPYTQI  445 (529)
Q Consensus       423 ---~~~~~~~q~~a~~G~~f~~~~~~  445 (529)
                         ..++.+.+..+++|++++.+++-
T Consensus       209 ~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          209 STYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             TTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             HHhhhcCHHHHhcCCCCeEEEECCCC
Confidence               23556677889999999999983

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=89.77  E-value=0.57  Score=47.05  Aligned_cols=54  Identities=13%  Similarity=0.100  Sum_probs=41.6

Q ss_pred             hHHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          340 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       340 ltaavv~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      .||+-.++... +..+.|+++|++|  -||+++++.+...|.+|..  +++++.+.+++
T Consensus       156 ~ta~~~l~~~~~~~g~~vlV~Ga~g--giG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~  212 (347)
T 2hcy_A          156 ITVYKALKSANLMAGHWVAISGAAG--GLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS  212 (347)
T ss_dssp             HHHHHHHHTTTCCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence            34555555442 3456899999998  9999999999999999887  78888876654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=89.76  E-value=0.34  Score=48.19  Aligned_cols=54  Identities=26%  Similarity=0.313  Sum_probs=41.0

Q ss_pred             hHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          340 LAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       340 ltaavv~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +||+..++.     +..+..+|++.|++|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       133 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G--~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~  193 (330)
T 1tt7_A          133 FTAALSVHRLEQNGLSPEKGSVLVTGATG--GVGGIAVSMLNKRGYDVVASTGNREAADYLKQ  193 (330)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEESTTS--HHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             HHHHHHHHHHHhcCcCCCCceEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            456655543     333433699999998  9999999998889998877  77888887764

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=89.73  E-value=0.13  Score=51.77  Aligned_cols=37  Identities=16%  Similarity=0.142  Sum_probs=29.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+
T Consensus         2 ~k~vlVTGas~--GIG~ala~~L~~~G~~v~~v~r~~~~~~   40 (327)
T 1jtv_A            2 RTVVLITGCSS--GIGLHLAVRLASDPSQSFKVYATLRDLK   40 (327)
T ss_dssp             CEEEEESCCSS--HHHHHHHHHHHTCTTCCEEEEEEESCGG
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCceEEEEeecCcHH
Confidence            35789999998  9999999999999988765  5544443

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=89.71  E-value=0.12  Score=49.32  Aligned_cols=33  Identities=21%  Similarity=0.295  Sum_probs=29.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      ++|+|+|++|  -||+++++.|.++|.+|.+  |+.+
T Consensus         3 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   37 (267)
T 3ay3_A            3 NRLLVTGAAG--GVGSAIRPHLGTLAHEVRLSDIVDL   37 (267)
T ss_dssp             EEEEEESTTS--HHHHHHGGGGGGTEEEEEECCSSCC
T ss_pred             ceEEEECCCC--HHHHHHHHHHHhCCCEEEEEeCCCc
Confidence            4799999999  9999999999999999988  5544

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=89.69  E-value=0.61  Score=50.37  Aligned_cols=86  Identities=14%  Similarity=0.111  Sum_probs=61.1

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec-
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-  422 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-  422 (529)
                      ....++|.++|. |  .||+.+|+.|...|.+|+.  ++.++.+..++. +.+       +.++++  +.++++|  +| 
T Consensus       271 ~l~GktV~IiG~-G--~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~-Ga~-------~~~l~e~l~~aDvVi~atgt  339 (494)
T 3ce6_A          271 LIGGKKVLICGY-G--DVGKGCAEAMKGQGARVSVTEIDPINALQAMME-GFD-------VVTVEEAIGDADIVVTATGN  339 (494)
T ss_dssp             CCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCE-------ECCHHHHGGGCSEEEECSSS
T ss_pred             CCCcCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCE-------EecHHHHHhCCCEEEECCCC
Confidence            345678999997 7  9999999999999999988  666766544332 221       112332  4566655  33 


Q ss_pred             -CcCChhhhhcCCCCceeecccccC
Q 009674          423 -DDLTGKEQARAPKGTIFIPYTQIP  446 (529)
Q Consensus       423 -~~~~~~~q~~a~~G~~f~~~~~~~  446 (529)
                       ..++.+....+++|++++.+++++
T Consensus       340 ~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          340 KDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             SCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             HHHHHHHHHHhcCCCcEEEEeCCCC
Confidence             446667888899999999998744

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=89.67  E-value=0.81  Score=45.20  Aligned_cols=86  Identities=15%  Similarity=0.218  Sum_probs=57.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--cCcCC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDLT  426 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~~  426 (529)
                      ..+|.++|+ |  .+|+++|+.|.+.|.+|.+  |++++.+++++. +  .  .  ...+.++  ++++++|+  .+.-.
T Consensus        30 ~~~I~iIG~-G--~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g--~--~--~~~~~~~~~~~~DvVi~av~~~~~   99 (316)
T 2uyy_A           30 DKKIGFLGL-G--LMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQE-G--A--R--LGRTPAEVVSTCDITFACVSDPKA   99 (316)
T ss_dssp             SSCEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHT-T--C--E--ECSCHHHHHHHCSEEEECCSSHHH
T ss_pred             CCeEEEEcc-c--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHc-C--C--E--EcCCHHHHHhcCCEEEEeCCCHHH
Confidence            357999996 6  9999999999999999988  888888888763 1  0  1  1224443  56666553  21100


Q ss_pred             hhh--------hhcCCCCceeecccccCcc
Q 009674          427 GKE--------QARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       427 ~~~--------q~~a~~G~~f~~~~~~~~~  448 (529)
                      -++        ...+++|+++++.+..++.
T Consensus       100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~  129 (316)
T 2uyy_A          100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDAD  129 (316)
T ss_dssp             HHHHHHSTTCGGGGCCTTCEEEECSCCCHH
T ss_pred             HHHHHcCchhHhhcCCCCCEEEECCCCCHH
Confidence            011        1346789999988876653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=89.66  E-value=0.33  Score=44.00  Aligned_cols=41  Identities=17%  Similarity=0.218  Sum_probs=35.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~~~  396 (529)
                      ..+|+++|. |  .+|+.+|+.|.+. |.+|++  +++++.+.+++.
T Consensus        39 ~~~v~IiG~-G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~   82 (183)
T 3c85_A           39 HAQVLILGM-G--RIGTGAYDELRARYGKISLGIEIREEAAQQHRSE   82 (183)
T ss_dssp             TCSEEEECC-S--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT
T ss_pred             CCcEEEECC-C--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC
Confidence            457999995 6  9999999999998 999988  888888887654

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=89.66  E-value=0.55  Score=52.87  Aligned_cols=93  Identities=16%  Similarity=0.193  Sum_probs=57.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh--------Ccccc--------ccceeeec-cccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR--------IPVEA--------QHNLVLST-SYAA  413 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~--------~~~~~--------~~~l~~~~-~~~~  413 (529)
                      -++|.|+|+-   .+|+.+|..|++.|.+|++  ++++..++.++.        +..+.        ....+..+ ++++
T Consensus       312 ~~kV~VIGaG---~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~  388 (725)
T 2wtb_A          312 IKKVAIIGGG---LMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYES  388 (725)
T ss_dssp             CCCEEEECCS---HHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGG
T ss_pred             CcEEEEEcCC---HhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHH
Confidence            4579999985   9999999999999999999  788887765432        11111        01113333 7765


Q ss_pred             -CcceEEE--EcCcCChhh------hhcCCCCceeeccc-ccCcc
Q 009674          414 -HKTKIWL--VGDDLTGKE------QARAPKGTIFIPYT-QIPPR  448 (529)
Q Consensus       414 -~~~~vwi--vg~~~~~~~------q~~a~~G~~f~~~~-~~~~~  448 (529)
                       ++++++|  |-+.++-++      ...+++|++++.-+ -+|+.
T Consensus       389 ~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~  433 (725)
T 2wtb_A          389 FRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLN  433 (725)
T ss_dssp             GTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred             HCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHH
Confidence             7888766  322221111      12468888886543 35554

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=89.65  E-value=0.5  Score=47.12  Aligned_cols=86  Identities=10%  Similarity=0.145  Sum_probs=54.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--cc----cc----CcceEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY----AA----HKTKIW  419 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~~----~~----~~~~vw  419 (529)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++ ++.+.   .+..+  +.    .+    ..++++
T Consensus       145 ~g~~vlV~Ga~g--giG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g~~~---~~d~~~~~~~~~i~~~~~~~~~d~v  218 (333)
T 1wly_A          145 PGDYVLIHAAAG--GMGHIMVPWARHLGATVIGTVSTEEKAETARK-LGCHH---TINYSTQDFAEVVREITGGKGVDVV  218 (333)
T ss_dssp             TTCEEEETTTTS--TTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSE---EEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCE---EEECCCHHHHHHHHHHhCCCCCeEE
Confidence            456899999998  9999999999999999888  88888887765 33221   11222  11    11    235666


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 009674          420 L--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       420 i--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                      |  +|...-.+-...+.+|-.++.+.
T Consensus       219 i~~~g~~~~~~~~~~l~~~G~iv~~g  244 (333)
T 1wly_A          219 YDSIGKDTLQKSLDCLRPRGMCAAYG  244 (333)
T ss_dssp             EECSCTTTHHHHHHTEEEEEEEEECC
T ss_pred             EECCcHHHHHHHHHhhccCCEEEEEe
Confidence            6  55422233334455666677666

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=89.64  E-value=0.4  Score=46.10  Aligned_cols=83  Identities=16%  Similarity=0.209  Sum_probs=52.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--------------HHHHHhhCccccccceeeeccccc--
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--------------YEKLKLRIPVEAQHNLVLSTSYAA--  413 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~--------------~~~l~~~~~~~~~~~l~~~~~~~~--  413 (529)
                      ...+|.++|+ |  .+|+++|+.|.+.|.+|++  |++++              ++++.++.+.      ...++.++  
T Consensus        18 ~~~kIgiIG~-G--~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~e~~   88 (245)
T 3dtt_A           18 QGMKIAVLGT-G--TVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPH------VHLAAFADVA   88 (245)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTT------CEEEEHHHHH
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCc------eeccCHHHHH
Confidence            4678999995 4  9999999999999999999  77776              5555554321      11334443  


Q ss_pred             CcceEEEE--cCcCChh---hh-hcCCCCceeeccc
Q 009674          414 HKTKIWLV--GDDLTGK---EQ-ARAPKGTIFIPYT  443 (529)
Q Consensus       414 ~~~~vwiv--g~~~~~~---~q-~~a~~G~~f~~~~  443 (529)
                      ++++++|+  -..-..+   +. ....+|+++++.+
T Consensus        89 ~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s  124 (245)
T 3dtt_A           89 AGAELVVNATEGASSIAALTAAGAENLAGKILVDIA  124 (245)
T ss_dssp             HHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECC
T ss_pred             hcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECC
Confidence            56777552  1110011   11 1123789999998

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=89.61  E-value=0.35  Score=48.05  Aligned_cols=57  Identities=21%  Similarity=0.298  Sum_probs=42.5

Q ss_pred             hHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          340 LAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       340 ltaavv~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +||+..++.     +..+..+|++.|++|  -||.+.++.+...|.+|..  +++++++.+++ ++.
T Consensus       132 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G--~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa  195 (328)
T 1xa0_A          132 FTAALSIHRLEEHGLTPERGPVLVTGATG--GVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGA  195 (328)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTC
T ss_pred             HHHHHHHHHHhhcCCCCCCceEEEecCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCC
Confidence            356655543     333443699999998  9999999998889998877  77888887754 443

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=89.57  E-value=0.43  Score=51.38  Aligned_cols=43  Identities=19%  Similarity=0.276  Sum_probs=33.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc---hhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC---KDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~---~~~~~~l~~~~  397 (529)
                      .+.|+++|++|  -||+++|++|+++|. +|.+  |+   .+..+++.+++
T Consensus       239 ~~~vLITGgsg--GIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l  287 (496)
T 3mje_A          239 HGSVLVTGGTG--GIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAEL  287 (496)
T ss_dssp             CSEEEEETCSS--HHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CCEEEEECCCC--chHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHH
Confidence            37899999998  999999999999998 6666  54   33455555553

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=89.53  E-value=0.55  Score=47.10  Aligned_cols=54  Identities=20%  Similarity=0.155  Sum_probs=41.8

Q ss_pred             hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          340 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       340 ltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      .||+-.++..  .+..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       152 ~ta~~al~~~~~~~~g~~vlV~Gasg--~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~  209 (343)
T 2eih_A          152 LTAWQMVVDKLGVRPGDDVLVMAAGS--GVSVAAIQIAKLFGARVIATAGSEDKLRRAKA  209 (343)
T ss_dssp             HHHHHHHTTTSCCCTTCEEEECSTTS--TTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence            3444455443  23456899999998  9999999999999999887  88888888764

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=89.33  E-value=0.78  Score=49.10  Aligned_cols=96  Identities=14%  Similarity=0.088  Sum_probs=58.1

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH--------HHHHhh--Ccccc---ccceeeec-cccc
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY--------EKLKLR--IPVEA---QHNLVLST-SYAA  413 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~--------~~l~~~--~~~~~---~~~l~~~~-~~~~  413 (529)
                      |..-++|.|+|+-   .+|+.+|..|++.|.+|++  +++++-        +++.++  +..+.   ....+..+ ++++
T Consensus        51 ~~~i~kVaVIGaG---~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~a  127 (460)
T 3k6j_A           51 AYDVNSVAIIGGG---TMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHK  127 (460)
T ss_dssp             CCCCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGG
T ss_pred             cccCCEEEEECCC---HHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHH
Confidence            3455789999995   9999999999999999999  666632        222222  11110   11113333 7766


Q ss_pred             -CcceEEE--EcCcCChh-----hh-hcCCCCceeecc-cccCcc
Q 009674          414 -HKTKIWL--VGDDLTGK-----EQ-ARAPKGTIFIPY-TQIPPR  448 (529)
Q Consensus       414 -~~~~vwi--vg~~~~~~-----~q-~~a~~G~~f~~~-~~~~~~  448 (529)
                       ++++++|  |-+.++-+     ++ ..+++|++++.- |-+|+.
T Consensus       128 l~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~  172 (460)
T 3k6j_A          128 LSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN  172 (460)
T ss_dssp             CTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH
T ss_pred             HccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH
Confidence             7888876  32222111     11 247899999764 336654

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=89.29  E-value=0.51  Score=48.01  Aligned_cols=82  Identities=15%  Similarity=0.195  Sum_probs=58.6

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc
Q 009674          340 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  412 (529)
Q Consensus       340 ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~  412 (529)
                      -|.+.|++-+     +-.-++|+|+|...  -||+-+|..|.++|-.|++  +..+                     +++
T Consensus       161 cTp~gv~~lL~~~~i~l~Gk~vvViGRS~--iVGkPla~LL~~~~ATVTi~Hs~T~---------------------dl~  217 (303)
T 4b4u_A          161 ATPAGIMTILKENNIEIAGKHAVVVGRSA--ILGKPMAMMLLQANATVTICHSRTQ---------------------NLP  217 (303)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------SHH
T ss_pred             ccHHHHHHHHHHHCCCCCCCEEEEEeccc--cccchHHHHHHhcCCEEEEecCCCC---------------------CHH
Confidence            3566666544     33578999999997  9999999999999999999  2111                     232


Q ss_pred             c--CcceEEEEc----CcCChhhhhcCCCCceeecccccCcc
Q 009674          413 A--HKTKIWLVG----DDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       413 ~--~~~~vwivg----~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      +  +.+||+|+.    .-++++.   .++|+++||+. +.+.
T Consensus       218 ~~~~~ADIvV~A~G~p~~i~~d~---vk~GavVIDVG-in~~  255 (303)
T 4b4u_A          218 ELVKQADIIVGAVGKAELIQKDW---IKQGAVVVDAG-FHPR  255 (303)
T ss_dssp             HHHHTCSEEEECSCSTTCBCGGG---SCTTCEEEECC-CBCC
T ss_pred             HHhhcCCeEEeccCCCCcccccc---ccCCCEEEEec-eecC
Confidence            2  356676632    3456554   49999999998 7665

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=89.26  E-value=0.32  Score=50.13  Aligned_cols=26  Identities=12%  Similarity=0.286  Sum_probs=22.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI  380 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~  380 (529)
                      .-+|.|+||+|  .||+.++..|++...
T Consensus        24 ~vKVaViGAaG--~IG~~la~~la~~~l   49 (345)
T 4h7p_A           24 AVKVAVTGAAG--QIGYALVPLIARGAL   49 (345)
T ss_dssp             CEEEEEESTTS--HHHHHHHHHHHHTTT
T ss_pred             CCEEEEECcCc--HHHHHHHHHHHhccc
Confidence            34899999999  999999999986543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=89.23  E-value=0.21  Score=55.11  Aligned_cols=30  Identities=17%  Similarity=0.248  Sum_probs=28.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+|+||+|  -||+++|+.|.++|.+|.+
T Consensus        11 ~~~ilVTGatG--~IG~~l~~~L~~~G~~V~~   40 (699)
T 1z45_A           11 SKIVLVTGGAG--YIGSHTVVELIENGYDCVV   40 (699)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            46899999999  9999999999999999988

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=89.21  E-value=0.57  Score=46.61  Aligned_cols=98  Identities=12%  Similarity=0.117  Sum_probs=60.8

Q ss_pred             hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--ccc-
Q 009674          340 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA-  412 (529)
Q Consensus       340 ltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~~~-  412 (529)
                      +||+..+...  .+..+.|++.|++|  -||.++++.+...|.+|..  +++++++.+++ ++...   .+..+  ++. 
T Consensus       126 ~ta~~~l~~~~~~~~g~~VlV~Ga~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~~---~~~~~~~~~~~  199 (325)
T 3jyn_A          126 LTVQYLLRQTYQVKPGEIILFHAAAG--GVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-LGAWE---TIDYSHEDVAK  199 (325)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSE---EEETTTSCHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCE---EEeCCCccHHH
Confidence            4455455443  23467899999998  9999999999999999987  78888887764 33221   11121  111 


Q ss_pred             ---c----CcceEEE--EcCcCChhhhhcCCCCceeeccc
Q 009674          413 ---A----HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       413 ---~----~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                         +    ...++++  +|...-..-...+.+|-.++.+.
T Consensus       200 ~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g  239 (325)
T 3jyn_A          200 RVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFG  239 (325)
T ss_dssp             HHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECC
T ss_pred             HHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEe
Confidence               1    2456666  55433333344555666666665

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=89.16  E-value=0.66  Score=46.38  Aligned_cols=64  Identities=16%  Similarity=0.072  Sum_probs=43.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCccccc-cceeee--ccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ-HNLVLS--TSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~~-~~l~~~--~~~~~-~~~~vwiv  421 (529)
                      +|.++|+ |  .+|.++|..|++.|.  +|.+  +++++.+....++..... ..-..+  +++++ ++++++|+
T Consensus         2 kI~VIGa-G--~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi   73 (304)
T 2v6b_A            2 KVGVVGT-G--FVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVIL   73 (304)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEE
Confidence            6899999 7  999999999999998  8888  777777654444322210 001122  35555 78887664

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=89.08  E-value=0.47  Score=48.82  Aligned_cols=78  Identities=19%  Similarity=0.231  Sum_probs=56.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  421 (529)
                      .++|.++|--   .||+++|+.|...|.+|+.  ++.++      +....     +...++++  ++++++++       
T Consensus       148 gktvgIiGlG---~IG~~vA~~l~~~G~~V~~~d~~~~~------~~~~~-----~~~~~l~ell~~aDvV~l~~Plt~~  213 (343)
T 2yq5_A          148 NLTVGLIGVG---HIGSAVAEIFSAMGAKVIAYDVAYNP------EFEPF-----LTYTDFDTVLKEADIVSLHTPLFPS  213 (343)
T ss_dssp             GSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCCG------GGTTT-----CEECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCeEEEEecC---HHHHHHHHHHhhCCCEEEEECCChhh------hhhcc-----ccccCHHHHHhcCCEEEEcCCCCHH
Confidence            5689999974   9999999999999999998  44332      11110     22225554  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc
Q 009674          422 -GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 -g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                       -..++.+....|++|+++|.++|
T Consensus       214 t~~li~~~~l~~mk~gailIN~aR  237 (343)
T 2yq5_A          214 TENMIGEKQLKEMKKSAYLINCAR  237 (343)
T ss_dssp             TTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             HHHHhhHHHHhhCCCCcEEEECCC
Confidence             23567788889999999999998

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=89.01  E-value=0.37  Score=49.22  Aligned_cols=80  Identities=13%  Similarity=0.173  Sum_probs=56.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  421 (529)
                      .++|-++|--   .||+++|+.|...|.+|+.  |+.++.+    ..  ..   .....++++  ++++++++       
T Consensus       140 g~tvGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~~~----~~--~~---~~~~~~l~ell~~aDvV~l~lPlt~~  207 (324)
T 3hg7_A          140 GRTLLILGTG---SIGQHIAHTGKHFGMKVLGVSRSGRERA----GF--DQ---VYQLPALNKMLAQADVIVSVLPATRE  207 (324)
T ss_dssp             TCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCCCCT----TC--SE---EECGGGHHHHHHTCSEEEECCCCCSS
T ss_pred             cceEEEEEEC---HHHHHHHHHHHhCCCEEEEEcCChHHhh----hh--hc---ccccCCHHHHHhhCCEEEEeCCCCHH
Confidence            5689999986   9999999999999999998  3332111    01  11   012335654  67777652       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc
Q 009674          422 -GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 -g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                       -..++.+....|++|+++|.++|
T Consensus       208 T~~li~~~~l~~mk~gailIN~aR  231 (324)
T 3hg7_A          208 THHLFTASRFEHCKPGAILFNVGR  231 (324)
T ss_dssp             STTSBCTTTTTCSCTTCEEEECSC
T ss_pred             HHHHhHHHHHhcCCCCcEEEECCC
Confidence             23467788889999999999999

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=88.99  E-value=0.55  Score=47.26  Aligned_cols=62  Identities=18%  Similarity=0.252  Sum_probs=43.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc----ccceeeeccccc-CcceEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA----QHNLVLSTSYAA-HKTKIWL  420 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~----~~~l~~~~~~~~-~~~~vwi  420 (529)
                      +|.++|+ |  .+|.++|..|++.|.  +|.+  +++++.+.++.++....    ... +..+++++ ++++++|
T Consensus         2 kI~VIGa-G--~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~-i~~~d~~~~~~aDvVi   72 (319)
T 1a5z_A            2 KIGIVGL-G--RVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRAN-IYAGDYADLKGSDVVI   72 (319)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCE-EEECCGGGGTTCSEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcE-EEeCCHHHhCCCCEEE
Confidence            6899999 7  999999999999998  8988  78888887664432211    111 22235555 7787766

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=88.96  E-value=0.14  Score=51.94  Aligned_cols=80  Identities=15%  Similarity=0.188  Sum_probs=55.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE-------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  421 (529)
                      .++|.++|.-   .||+++|+.|...|.+|+.  |+.+..+.    +.. .    ....++++  ++++++++       
T Consensus       139 g~tvGIiG~G---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----~~~-~----~~~~~l~ell~~aDiV~l~~Plt~~  206 (315)
T 3pp8_A          139 EFSVGIMGAG---VLGAKVAESLQAWGFPLRCWSRSRKSWPG----VES-Y----VGREELRAFLNQTRVLINLLPNTAQ  206 (315)
T ss_dssp             TCCEEEECCS---HHHHHHHHHHHTTTCCEEEEESSCCCCTT----CEE-E----ESHHHHHHHHHTCSEEEECCCCCGG
T ss_pred             CCEEEEEeeC---HHHHHHHHHHHHCCCEEEEEcCCchhhhh----hhh-h----cccCCHHHHHhhCCEEEEecCCchh
Confidence            5689999985   9999999999999999998  44432211    100 0    01124554  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc
Q 009674          422 -GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 -g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                       -..++.+....+++|++++.++|
T Consensus       207 t~~li~~~~l~~mk~gailIN~aR  230 (315)
T 3pp8_A          207 TVGIINSELLDQLPDGAYVLNLAR  230 (315)
T ss_dssp             GTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhhccHHHHhhCCCCCEEEECCC
Confidence             23466788889999999999998

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=88.95  E-value=0.33  Score=48.10  Aligned_cols=54  Identities=22%  Similarity=0.267  Sum_probs=41.4

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          340 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       340 ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +||+..++.+     ..+..+|++.|++|  -||.+.++.+...|.+|..  +++++.+.+++
T Consensus       129 ~ta~~al~~~~~~~~~~~~g~VlV~Ga~G--~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~  189 (324)
T 3nx4_A          129 FTAMLCVMALEDAGIRPQDGEVVVTGASG--GVGSTAVALLHKLGYQVAAVSGRESTHGYLKS  189 (324)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             HHHHHHHHHhhhcccCCCCCeEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            4556555543     22332499999998  9999999999999999888  78888888865

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=88.93  E-value=0.32  Score=49.11  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=54.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc-----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-----  422 (529)
                      ..++|.++|. |  .||+++|+.|...|.+|..  |+.++.+              +...++++  +.++++++-     
T Consensus       143 ~g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~~~--------------~~~~~l~ell~~aDvV~l~~p~~~  205 (311)
T 2cuk_A          143 QGLTLGLVGM-G--RIGQAVAKRALAFGMRVVYHARTPKPLP--------------YPFLSLEELLKEADVVSLHTPLTP  205 (311)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCSSS--------------SCBCCHHHHHHHCSEEEECCCCCT
T ss_pred             CCCEEEEEEE-C--HHHHHHHHHHHHCCCEEEEECCCCcccc--------------cccCCHHHHHhhCCEEEEeCCCCh
Confidence            3467999996 5  9999999999999999988  4433221              11224443  456665532     


Q ss_pred             ---CcCChhhhhcCCCCceeecccccC
Q 009674          423 ---DDLTGKEQARAPKGTIFIPYTQIP  446 (529)
Q Consensus       423 ---~~~~~~~q~~a~~G~~f~~~~~~~  446 (529)
                         ..++.+....+++|++++++++-+
T Consensus       206 ~t~~li~~~~l~~mk~ga~lin~srg~  232 (311)
T 2cuk_A          206 ETHRLLNRERLFAMKRGAILLNTARGA  232 (311)
T ss_dssp             TTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             HHHhhcCHHHHhhCCCCcEEEECCCCC
Confidence               335567788899999999999843

>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...

Probab=88.88  E-value=2.4  Score=43.14  Aligned_cols=156  Identities=13%  Similarity=0.191  Sum_probs=91.3

Q ss_pred             HHHcCCcEEEecccc------cc-------cccccCCceeeecCCC---------Cc-ceeeecCCh----------hHH
Q 009674          296 ADAKGVKVISLGLLN------QG-------EELNRNGEIYLERQPN---------KL-KIKVVDGSS----------LAA  342 (529)
Q Consensus       296 A~k~G~kv~~LG~ln------~~-------e~ln~~g~~~~~k~p~---------~L-~irvv~Gns----------lta  342 (529)
                      +.++|.+++.|+.=+      ++       .-|....-..+.|+|.         .. +++|+.|-+          +=.
T Consensus        63 ~~~LGg~~i~l~~~~~~S~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl  142 (310)
T 3csu_A           63 MHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDL  142 (310)
T ss_dssp             HHTTTCEEEEESCC-----CCSHHHHHHHHHHHTTTCSEEEEEESSTTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHH
T ss_pred             HHHhCCeEEEeCCCccchhhccCCcHHHHHHHHHHhCCEEEEECCChhHHHHHHHhcCCCCEEcCccCCCCCchHHHHHH
Confidence            467999999996433      33       4456677788888885         34 678887432          124


Q ss_pred             HHHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCccccccceeeec-cccc--C
Q 009674          343 AVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYAA--H  414 (529)
Q Consensus       343 avv~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~~--~  414 (529)
                      .++.+.... +..+|+++|...-|-+++..+.+|++- |.+|.+-.++.|+   .+.+.+. +.+.. +.++ +.++  +
T Consensus       143 ~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~eav~  220 (310)
T 3csu_A          143 FTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLD-EKGIA-WSLHSSIEEVMA  220 (310)
T ss_dssp             HHHHHHHSCSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHH-HTTCC-EEECSCGGGTTT
T ss_pred             HHHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHH-HcCCe-EEEEcCHHHHhc
Confidence            455554432 456899999862128999999999999 9999994443331   1212111 22223 3444 7774  8


Q ss_pred             cceEEEEcCcCChh-----hhhcCCCCceeecccccCcc---CCCCCce-eecCC
Q 009674          415 KTKIWLVGDDLTGK-----EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTP  460 (529)
Q Consensus       415 ~~~vwivg~~~~~~-----~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~  460 (529)
                      +++|+..+-| ..|     |..+.     +-+| |++.+   ..++|+. .|.+|
T Consensus       221 ~aDvvyt~~~-q~er~~~~~~~~~-----~~~y-~v~~~ll~~a~~~ai~mH~lP  268 (310)
T 3csu_A          221 EVDILYMTRV-QKERLDPSEYANV-----KAQF-VLRASDLHNAKANMKVLHPLP  268 (310)
T ss_dssp             TCSEEEECC-----------------------C-CBCGGGGTTCCTTCEEECCSC
T ss_pred             CCCEEEECCc-cccccCHHHHHHH-----hhcc-CCCHHHHhhcCCCCEEECCCC
Confidence            8899888655 332     22111     2234 47777   3457875 56666

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=88.87  E-value=0.6  Score=46.75  Aligned_cols=63  Identities=14%  Similarity=0.191  Sum_probs=44.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      +|.++|+ |  .+|.++|..|++.  |.+|.+  +++++.+.++.++...     ...+ +.. +++++ ++++++|+
T Consensus         2 kI~VIGa-G--~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~~l~~aDvVii   75 (310)
T 1guz_A            2 KITVIGA-G--NVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTK-VTGSNDYADTANSDIVII   75 (310)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCE-EEEESCGGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcE-EEECCCHHHHCCCCEEEE
Confidence            6899999 8  9999999999974  788988  8888888765432221     1112 333 47776 78877663

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=88.86  E-value=0.3  Score=49.97  Aligned_cols=80  Identities=14%  Similarity=0.084  Sum_probs=55.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------  422 (529)
                      .++|.++|. |  .||+++|+.|...|.+|+.  |+.++.+        +.    ....++++  ++++++++-      
T Consensus       164 g~~vgIIG~-G--~iG~~vA~~l~~~G~~V~~~dr~~~~~~--------g~----~~~~~l~ell~~aDvVil~vP~~~~  228 (333)
T 3ba1_A          164 GKRVGIIGL-G--RIGLAVAERAEAFDCPISYFSRSKKPNT--------NY----TYYGSVVELASNSDILVVACPLTPE  228 (333)
T ss_dssp             TCCEEEECC-S--HHHHHHHHHHHTTTCCEEEECSSCCTTC--------CS----EEESCHHHHHHTCSEEEECSCCCGG
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCEEEEECCCchhcc--------Cc----eecCCHHHHHhcCCEEEEecCCChH
Confidence            457999997 5  9999999999999999988  4433211        11    11235554  567776632      


Q ss_pred             --CcCChhhhhcCCCCceeecccccCc
Q 009674          423 --DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       423 --~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                        ..++.+....+++|++++.+++.+.
T Consensus       229 t~~li~~~~l~~mk~gailIn~srG~~  255 (333)
T 3ba1_A          229 TTHIINREVIDALGPKGVLINIGRGPH  255 (333)
T ss_dssp             GTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred             HHHHhhHHHHhcCCCCCEEEECCCCch
Confidence              3455567778899999999998443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=88.83  E-value=0.53  Score=46.23  Aligned_cols=28  Identities=14%  Similarity=0.145  Sum_probs=25.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc---C---cEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQM---G---IKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~---~---~~v~l  384 (529)
                      +|+|+|+||  -||+++++.|.++   |   .+|..
T Consensus         2 ~vlVTGatG--~iG~~l~~~L~~~~~~g~~~~~V~~   35 (337)
T 1r6d_A            2 RLLVTGGAG--FIGSHFVRQLLAGAYPDVPADEVIV   35 (337)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTSCTTSCCSEEEE
T ss_pred             eEEEECCcc--HHHHHHHHHHHhhhcCCCCceEEEE
Confidence            589999999  9999999999986   7   78887

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=88.83  E-value=0.28  Score=48.51  Aligned_cols=32  Identities=22%  Similarity=0.302  Sum_probs=28.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  387 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~  387 (529)
                      ++|+|+||+|  -||+++++.|.++|.+|..  |+.
T Consensus        22 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~   55 (333)
T 2q1w_A           22 KKVFITGICG--QIGSHIAELLLERGDKVVGIDNFA   55 (333)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEECCC
Confidence            5799999999  9999999999999999988  543

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=88.70  E-value=0.79  Score=47.64  Aligned_cols=108  Identities=15%  Similarity=0.208  Sum_probs=68.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Ccc-cc---------ccceeeeccccc--CcceEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPV-EA---------QHNLVLSTSYAA--HKTKIW  419 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~-~~---------~~~l~~~~~~~~--~~~~vw  419 (529)
                      +|.++|+ |  .+|.++|..|++ |.+|+.  +++++.+.+++. ++- +.         ..++...+++++  ++++++
T Consensus         2 kI~VIG~-G--~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvv   77 (402)
T 1dlj_A            2 KIAVAGS-G--YVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELV   77 (402)
T ss_dssp             EEEEECC-S--HHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEE
T ss_pred             EEEEECC-C--HHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEE
Confidence            5889998 5  999999999999 999988  889999999876 221 00         112122235543  566665


Q ss_pred             E--EcCcCCh--------------hhhhcCCCCceeecccccCcc---C----CCCCceeecCCccccCCC
Q 009674          420 L--VGDDLTG--------------KEQARAPKGTIFIPYTQIPPR---K----LRKDCFYHSTPAMIIPPS  467 (529)
Q Consensus       420 i--vg~~~~~--------------~~q~~a~~G~~f~~~~~~~~~---~----~R~dc~y~~~~a~~~P~~  467 (529)
                      |  |....++              ++...+.+|++++.-|+++|.   +    +.++ .+..+|...-|+.
T Consensus        78 iiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~-~v~~~Pe~~~~G~  147 (402)
T 1dlj_A           78 IIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTD-RIIFSPEFLRESK  147 (402)
T ss_dssp             EECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCS-CEEECCCCCCTTS
T ss_pred             EEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCC-eEEECCccccCcc
Confidence            5  4443210              112225789999987888886   2    2233 4445566656665

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=88.68  E-value=0.56  Score=48.47  Aligned_cols=83  Identities=10%  Similarity=0.076  Sum_probs=57.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG----  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg----  422 (529)
                      ..++|.++|. |  .||+++|+.|...|.+ |+.  |+.++.+.. .+.+...      ..++++  +.++++++-    
T Consensus       163 ~g~tvgIIG~-G--~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~-~~~g~~~------~~~l~ell~~aDvV~l~~P~t  232 (364)
T 2j6i_A          163 EGKTIATIGA-G--RIGYRVLERLVPFNPKELLYYDYQALPKDAE-EKVGARR------VENIEELVAQADIVTVNAPLH  232 (364)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHGGGCCSEEEEECSSCCCHHHH-HHTTEEE------CSSHHHHHHTCSEEEECCCCS
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHhCCCcEEEEECCCccchhHH-HhcCcEe------cCCHHHHHhcCCEEEECCCCC
Confidence            4668999996 5  9999999999999997 887  444333322 2222111      224554  566665521    


Q ss_pred             ----CcCChhhhhcCCCCceeecccc
Q 009674          423 ----DDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       423 ----~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                          ..++.+.+..+++|+++|.+++
T Consensus       233 ~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          233 AGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             TTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             hHHHHHhCHHHHhhCCCCCEEEECCC
Confidence                3566778889999999999999

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=88.68  E-value=0.71  Score=46.44  Aligned_cols=44  Identities=9%  Similarity=0.100  Sum_probs=38.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.|+++|++|  -||.++++.+...|. +|..  +++++.+.++++++.
T Consensus       162 ~~vlI~Gasg--giG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~  208 (357)
T 2zb4_A          162 KTMVVSGAAG--ACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF  208 (357)
T ss_dssp             CEEEESSTTB--HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC
T ss_pred             cEEEEECCCc--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC
Confidence            7899999998  999999999999999 8887  788899988876654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=88.67  E-value=0.66  Score=46.23  Aligned_cols=87  Identities=16%  Similarity=0.129  Sum_probs=56.1

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec--ccc----c----CcceE
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA----A----HKTKI  418 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~--~~~----~----~~~~v  418 (529)
                      +..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++ ++...-   +..+  ++.    +    ...++
T Consensus       147 ~~g~~vlV~Ga~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~~---~~~~~~~~~~~~~~~~~~~g~D~  220 (334)
T 3qwb_A          147 KKGDYVLLFAAAG--GVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-YGAEYL---INASKEDILRQVLKFTNGKGVDA  220 (334)
T ss_dssp             CTTCEEEESSTTB--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEE---EETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcEE---EeCCCchHHHHHHHHhCCCCceE
Confidence            3456899999998  9999999999999999988  78888886654 443221   1111  111    1    23566


Q ss_pred             EE--EcCcCChhhhhcCCCCceeeccc
Q 009674          419 WL--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       419 wi--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                      ++  +|...-..-...+.+|-.++.+.
T Consensus       221 vid~~g~~~~~~~~~~l~~~G~iv~~G  247 (334)
T 3qwb_A          221 SFDSVGKDTFEISLAALKRKGVFVSFG  247 (334)
T ss_dssp             EEECCGGGGHHHHHHHEEEEEEEEECC
T ss_pred             EEECCChHHHHHHHHHhccCCEEEEEc
Confidence            66  55433333444556666666665

>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1

Probab=88.59  E-value=2.2  Score=43.74  Aligned_cols=163  Identities=17%  Similarity=0.221  Sum_probs=97.5

Q ss_pred             HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++.|+.=    +++|.       |....-..+.|+|.         ..+++|+.|-+         +=..++.
T Consensus        80 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  159 (325)
T 1vlv_A           80 FAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIE  159 (325)
T ss_dssp             HHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence            45799999999753    34444       35556678888876         24577777654         1134555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HH---HhhCccccccceeeec-cccc--Ccc
Q 009674          347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KL---KLRIPVEAQHNLVLST-SYAA--HKT  416 (529)
Q Consensus       347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l---~~~~~~~~~~~l~~~~-~~~~--~~~  416 (529)
                      +.... +..+|+++|.. .|-+++..+.+|++-|.+|.+-.++.|+   .+   .++...+.+.. +.++ +.++  +++
T Consensus       160 e~~g~l~gl~va~vGD~-~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~-v~~~~d~~eav~~a  237 (325)
T 1vlv_A          160 ENFGRLKGVKVVFMGDT-RNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGS-VSFTSNLEEALAGA  237 (325)
T ss_dssp             HHHSCSTTCEEEEESCT-TSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCE-EEEESCHHHHHTTC
T ss_pred             HHhCCcCCcEEEEECCC-CcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHHccC
Confidence            54332 35689999996 2489999999999999999993333331   11   11111223323 3344 7774  889


Q ss_pred             eEEEEcCcCChhhhhcCCCC-ceeecccccCcc---CC-CCCce-eecCCc
Q 009674          417 KIWLVGDDLTGKEQARAPKG-TIFIPYTQIPPR---KL-RKDCF-YHSTPA  461 (529)
Q Consensus       417 ~vwivg~~~~~~~q~~a~~G-~~f~~~~~~~~~---~~-R~dc~-y~~~~a  461 (529)
                      +|+..+-|.+..++...+.- -.|-+| |++++   .. ++|+. .+.+|+
T Consensus       238 Dvvyt~~w~smg~~~~~~~~~~~~~~y-~v~~ell~~a~k~dai~mH~LP~  287 (325)
T 1vlv_A          238 DVVYTDVWASMGEEDKEKERMALLKPY-QVNERVMEMTGKSETIFMHCLPA  287 (325)
T ss_dssp             SEEEECCCC----------CHHHHGGG-CBCHHHHHTTCCTTCEEEECSCC
T ss_pred             CEEEeccccccccccchHhHHHHHhhc-CCCHHHHHhccCCCeEEECCCCC
Confidence            99888777654433211211 223445 38887   55 77876 778886

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=88.59  E-value=0.62  Score=46.19  Aligned_cols=42  Identities=10%  Similarity=0.021  Sum_probs=36.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ..+.|+++|++|  -||.++++.+.+.|.+|..  +++++++.+++
T Consensus       140 ~g~~vlV~Ga~g--giG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~  183 (327)
T 1qor_A          140 PDEQFLFHAAAG--GVGLIACQWAKALGAKLIGTVGTAQKAQSALK  183 (327)
T ss_dssp             TTCEEEESSTTB--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            456899999998  9999999999999999888  78888887765

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=88.57  E-value=0.36  Score=53.05  Aligned_cols=45  Identities=13%  Similarity=0.179  Sum_probs=35.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP  398 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~---------~~~~~l~~~~~  398 (529)
                      ..+.|+++|+++  -||+++|+.|+++|.+|.+  ++.         ++.+++.+++.
T Consensus         7 ~gkvalVTGas~--GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~   62 (604)
T 2et6_A            7 KDKVVIITGAGG--GLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV   62 (604)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHH
Confidence            346789999997  9999999999999999998  443         66777766653

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=88.52  E-value=0.54  Score=47.61  Aligned_cols=83  Identities=8%  Similarity=0.098  Sum_probs=56.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC---
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD---  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~---  423 (529)
                      ..++|.++|. |  .||+++|+.|...|.+|..  + +.++ +.. .+.+...      ..++++  +.++++++--   
T Consensus       145 ~g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~~g~~~------~~~l~ell~~aDvVil~~p~~  213 (320)
T 1gdh_A          145 DNKTLGIYGF-G--SIGQALAKRAQGFDMDIDYFDTHRASS-SDE-ASYQATF------HDSLDSLLSVSQFFSLNAPST  213 (320)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHTTTCEEEEECSSCCCH-HHH-HHHTCEE------CSSHHHHHHHCSEEEECCCCC
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCcCh-hhh-hhcCcEE------cCCHHHHHhhCCEEEEeccCc
Confidence            3567999997 5  9999999999999999988  5 5444 222 1112111      224544  5667766322   


Q ss_pred             -----cCChhhhhcCCCCceeeccccc
Q 009674          424 -----DLTGKEQARAPKGTIFIPYTQI  445 (529)
Q Consensus       424 -----~~~~~~q~~a~~G~~f~~~~~~  445 (529)
                           .++.+....+++|++++++++-
T Consensus       214 ~~t~~~i~~~~l~~mk~gailIn~arg  240 (320)
T 1gdh_A          214 PETRYFFNKATIKSLPQGAIVVNTARG  240 (320)
T ss_dssp             TTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             hHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence                 3445667889999999999984

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=88.52  E-value=0.8  Score=43.76  Aligned_cols=81  Identities=19%  Similarity=0.317  Sum_probs=52.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc-CcceEEEEcCcCChh--
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGDDLTGK--  428 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~~~~~~--  428 (529)
                      +|.++|+ |  .+|+++|..|.+.| .+|.+  |++++.++++++.+...      ..+.++ .+++++|+--.  +.  
T Consensus         2 ~i~iiG~-G--~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~------~~~~~~~~~~D~vi~~v~--~~~~   70 (263)
T 1yqg_A            2 NVYFLGG-G--NMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET------SATLPELHSDDVLILAVK--PQDM   70 (263)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE------ESSCCCCCTTSEEEECSC--HHHH
T ss_pred             EEEEECc-h--HHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEE------eCCHHHHhcCCEEEEEeC--chhH
Confidence            5889996 6  99999999999999 88888  88899998887642111      224433 35566553211  11  


Q ss_pred             -----hhhcCCCCceeecc-cccCcc
Q 009674          429 -----EQARAPKGTIFIPY-TQIPPR  448 (529)
Q Consensus       429 -----~q~~a~~G~~f~~~-~~~~~~  448 (529)
                           +... + |+++++. +-++++
T Consensus        71 ~~v~~~l~~-~-~~ivv~~~~g~~~~   94 (263)
T 1yqg_A           71 EAACKNIRT-N-GALVLSVAAGLSVG   94 (263)
T ss_dssp             HHHHTTCCC-T-TCEEEECCTTCCHH
T ss_pred             HHHHHHhcc-C-CCEEEEecCCCCHH
Confidence                 1111 3 8888887 446654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=88.48  E-value=0.36  Score=47.31  Aligned_cols=29  Identities=10%  Similarity=0.164  Sum_probs=26.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC--cEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~l  384 (529)
                      .+|+|+|++|  -||+++|+.|.++|  .+|..
T Consensus         4 m~vlVTGatG--~iG~~l~~~L~~~g~~~~V~~   34 (336)
T 2hun_A            4 MKLLVTGGMG--FIGSNFIRYILEKHPDWEVIN   34 (336)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHHCTTCEEEE
T ss_pred             CeEEEECCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence            3699999999  99999999999886  88887

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=88.46  E-value=0.68  Score=48.05  Aligned_cols=81  Identities=15%  Similarity=0.141  Sum_probs=55.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchh-hHHHHHhhCccccccceeeeccccc--CcceEEEE--------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD-DYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~-~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------  421 (529)
                      .++|-++|--   .||+++|+.|...|.+|+..+.. +-+..+ +.+.       ...++++  +.++++++        
T Consensus       176 gktvGIIGlG---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~g~-------~~~~l~ell~~aDvV~l~~Plt~~T  244 (365)
T 4hy3_A          176 GSEIGIVGFG---DLGKALRRVLSGFRARIRVFDPWLPRSMLE-ENGV-------EPASLEDVLTKSDFIFVVAAVTSEN  244 (365)
T ss_dssp             SSEEEEECCS---HHHHHHHHHHTTSCCEEEEECSSSCHHHHH-HTTC-------EECCHHHHHHSCSEEEECSCSSCC-
T ss_pred             CCEEEEecCC---cccHHHHHhhhhCCCEEEEECCCCCHHHHh-hcCe-------eeCCHHHHHhcCCEEEEcCcCCHHH
Confidence            5689999964   99999999999999999982221 112111 1111       1224554  56666552        


Q ss_pred             cCcCChhhhhcCCCCceeecccc
Q 009674          422 GDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       422 g~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                      -..++.+....|++|++++.+++
T Consensus       245 ~~li~~~~l~~mk~gailIN~aR  267 (365)
T 4hy3_A          245 KRFLGAEAFSSMRRGAAFILLSR  267 (365)
T ss_dssp             --CCCHHHHHTSCTTCEEEECSC
T ss_pred             HhhcCHHHHhcCCCCcEEEECcC
Confidence            23577888999999999999998

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=88.46  E-value=0.81  Score=48.81  Aligned_cols=115  Identities=14%  Similarity=0.209  Sum_probs=74.2

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhh-Ccc-cc----------ccceeeeccccc
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLR-IPV-EA----------QHNLVLSTSYAA  413 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~--~~~v~l--~~~~~~~~l~~~-~~~-~~----------~~~l~~~~~~~~  413 (529)
                      |....+|.++|+-   .+|.++|..|++.  |.+|++  +++++.+.+++. .+. +.          ...+...+++++
T Consensus         6 ~~~~mkI~VIG~G---~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~   82 (481)
T 2o3j_A            6 FGKVSKVVCVGAG---YVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPK   82 (481)
T ss_dssp             SCCCCEEEEECCS---TTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHH
T ss_pred             CCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHH
Confidence            3334589999975   9999999999988  789998  899999999864 211 01          012223336643


Q ss_pred             --CcceEEE--EcCcCCh------------------hh-hhcCCCCceeecccccCcc--C---------CC----CCce
Q 009674          414 --HKTKIWL--VGDDLTG------------------KE-QARAPKGTIFIPYTQIPPR--K---------LR----KDCF  455 (529)
Q Consensus       414 --~~~~vwi--vg~~~~~------------------~~-q~~a~~G~~f~~~~~~~~~--~---------~R----~dc~  455 (529)
                        ++++++|  |++..+.                  ++ ...+++|+++++-|.+||.  +         .+    .|+.
T Consensus        83 ~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~  162 (481)
T 2o3j_A           83 AIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQ  162 (481)
T ss_dssp             HHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEE
T ss_pred             HhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceE
Confidence              6676655  5454321                  11 1247889999998888875  1         22    3455


Q ss_pred             eecCCccccCCC
Q 009674          456 YHSTPAMIIPPS  467 (529)
Q Consensus       456 y~~~~a~~~P~~  467 (529)
                      +..+|...-|+.
T Consensus       163 v~~~Pe~~~~G~  174 (481)
T 2o3j_A          163 VLSNPEFLAEGT  174 (481)
T ss_dssp             EEECCCCCCTTC
T ss_pred             EEeCcccccccc
Confidence            666776666665

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=88.38  E-value=0.37  Score=46.37  Aligned_cols=33  Identities=18%  Similarity=0.288  Sum_probs=28.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      ++|+|+| +|  -||+++++.|.++|.+|..  |+.++
T Consensus         4 ~~ilVtG-aG--~iG~~l~~~L~~~g~~V~~~~r~~~~   38 (286)
T 3gpi_A            4 SKILIAG-CG--DLGLELARRLTAQGHEVTGLRRSAQP   38 (286)
T ss_dssp             CCEEEEC-CS--HHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred             CcEEEEC-CC--HHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            4799999 58  9999999999999999988  66554

>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A

Probab=88.25  E-value=1.5  Score=44.73  Aligned_cols=162  Identities=19%  Similarity=0.228  Sum_probs=99.5

Q ss_pred             HHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++.|+.    +.++|.       |....-..+.|+|.         ..+++|+.|-+         +=..++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  147 (315)
T 1pvv_A           68 MAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIW  147 (315)
T ss_dssp             HHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCcEEEEecCchHHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHH
Confidence            4579999999974    334444       35566778888886         34577776543         1134555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH------HHHHhhCccccccceeeec-cccc--Ccc
Q 009674          347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY------EKLKLRIPVEAQHNLVLST-SYAA--HKT  416 (529)
Q Consensus       347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~------~~l~~~~~~~~~~~l~~~~-~~~~--~~~  416 (529)
                      +.... +..+|+.+|..+  -+++..+.+|++-|.++.+-.++.|      .+..++...+.+.. +.++ +.++  +++
T Consensus       148 e~~g~l~gl~va~vGD~~--rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~-~~~~~d~~eav~~a  224 (315)
T 1pvv_A          148 EKKGTIKGVKVVYVGDGN--NVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGS-FELLHDPVKAVKDA  224 (315)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCE-EEEESCHHHHTTTC
T ss_pred             HHhCCcCCcEEEEECCCc--chHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEeCHHHHhCCC
Confidence            54432 456899999975  9999999999999999999333322      11112112223323 3344 7764  889


Q ss_pred             eEEEEcCcCChhhhhcCCCC-ceeecccccCcc---CCCCCce-eecCCc
Q 009674          417 KIWLVGDDLTGKEQARAPKG-TIFIPYTQIPPR---KLRKDCF-YHSTPA  461 (529)
Q Consensus       417 ~vwivg~~~~~~~q~~a~~G-~~f~~~~~~~~~---~~R~dc~-y~~~~a  461 (529)
                      +|+..+-|.+..++...+.- -.|-+| |++++   ..++|+. .|.+|+
T Consensus       225 Dvvy~~~w~smg~~~~~~~~~~~~~~y-~v~~ell~~a~~~ai~mH~lP~  273 (315)
T 1pvv_A          225 DVIYTDVWASMGQEAEAEERRKIFRPF-QVNKDLVKHAKPDYMFMHCLPA  273 (315)
T ss_dssp             SEEEECCCCCSSTTSSSSHHHHHHGGG-CBCHHHHHTSCTTCEEEECSCC
T ss_pred             CEEEEcceeccCcccchHHHHHHHHhc-CCCHHHHhhcCCCcEEECCCCC
Confidence            99888777654332111110 123344 48877   5567876 788886

>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A

Probab=88.20  E-value=0.8  Score=46.86  Aligned_cols=162  Identities=16%  Similarity=0.189  Sum_probs=99.0

Q ss_pred             HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++.|+.=    +++|.       |....-..+.|+|.         ..+++|+.|-+         +=..++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  147 (321)
T 1oth_A           68 FALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQ  147 (321)
T ss_dssp             HHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCCcCcCCCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHH
Confidence            45799999999753    34444       34456677888876         34688887764         1134555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH------HHHHhhCccccccceeeec-cccc--Ccc
Q 009674          347 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY------EKLKLRIPVEAQHNLVLST-SYAA--HKT  416 (529)
Q Consensus       347 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~------~~l~~~~~~~~~~~l~~~~-~~~~--~~~  416 (529)
                      +.... +..+|+++|...  -+++..+..|++-|.+|.+-.++.|      .+..++...+.+.. +.++ +.++  +++
T Consensus       148 e~~g~l~gl~va~vGD~~--~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~-~~~~~d~~eav~~a  224 (321)
T 1oth_A          148 EHYSSLKGLTLSWIGDGN--NILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTK-LLLTNDPLEAAHGG  224 (321)
T ss_dssp             HHHSCCTTCEEEEESCSS--HHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCC-EEEESCHHHHHTTC
T ss_pred             HHhCCcCCcEEEEECCch--hhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEECHHHHhccC
Confidence            55432 456899999974  7999999999999999999333322      22222222223333 4444 7764  889


Q ss_pred             eEEEEcCcCChh-hhhcCCCCceeecccccCcc---CCCCCce-eecCCc
Q 009674          417 KIWLVGDDLTGK-EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  461 (529)
Q Consensus       417 ~vwivg~~~~~~-~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a  461 (529)
                      +|+..+-|++-+ |..+.++=..|-+| |++.+   ..++|+. .|.+|+
T Consensus       225 Dvvy~d~w~s~g~e~~~~~~~~~~~~y-~v~~~~l~~a~~dai~mH~lP~  273 (321)
T 1oth_A          225 NVLITDTWISMGREEEKKKRLQAFQGY-QVTMKTAKVAASDWTFLHCLPR  273 (321)
T ss_dssp             SEEEECCSSCTTCGGGHHHHHHHTTTC-CBCHHHHHTSCTTCEEEECSCC
T ss_pred             CEEEEeccccccchhhhHHHHHhccCc-eECHHHHhhcCCCCEEECCCCC
Confidence            998887777621 11111110113334 47777   5568886 788886

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=88.17  E-value=0.39  Score=46.32  Aligned_cols=28  Identities=11%  Similarity=0.312  Sum_probs=25.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC-cEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMG-IKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~-~~v~l  384 (529)
                      +|+|+|+||  -||+++++.|.++| .+|..
T Consensus         1 ~vlVtGatG--~iG~~l~~~L~~~g~~~V~~   29 (310)
T 1eq2_A            1 MIIVTGGAG--FIGSNIVKALNDKGITDILV   29 (310)
T ss_dssp             CEEEETTTS--HHHHHHHHHHHTTTCCCEEE
T ss_pred             CEEEEcCcc--HHHHHHHHHHHHCCCcEEEE
Confidence            489999999  99999999999999 78877

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=88.09  E-value=0.3  Score=46.84  Aligned_cols=28  Identities=11%  Similarity=0.236  Sum_probs=26.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +|+|+|+||  -||+++++.|.++|.+|..
T Consensus         7 ~ilVtGatG--~iG~~l~~~L~~~g~~V~~   34 (287)
T 3sc6_A            7 RVIITGANG--QLGKQLQEELNPEEYDIYP   34 (287)
T ss_dssp             EEEEESTTS--HHHHHHHHHSCTTTEEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            799999999  9999999999999999988

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=88.04  E-value=1.1  Score=47.86  Aligned_cols=114  Identities=16%  Similarity=0.181  Sum_probs=76.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-cc-ccc-----------cceeeecccc-c-C
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV-EAQ-----------HNLVLSTSYA-A-H  414 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~-~~-~~~-----------~~l~~~~~~~-~-~  414 (529)
                      +.-+|.++|+-   -+|.++|..|++.|.+|++  +++++.+.|++.. +. +.+           .++...++++ + +
T Consensus         7 ~~~~I~VIG~G---~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~   83 (478)
T 2y0c_A            7 GSMNLTIIGSG---SVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVA   83 (478)
T ss_dssp             CCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred             CCceEEEECcC---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhh
Confidence            56689999987   9999999999999999999  8999999998862 11 111           1222334775 3 6


Q ss_pred             cceEEE--EcCcCC--------h-----hhh-hcCCCCceeecccccCcc----------C-C---C--CCceeecCCcc
Q 009674          415 KTKIWL--VGDDLT--------G-----KEQ-ARAPKGTIFIPYTQIPPR----------K-L---R--KDCFYHSTPAM  462 (529)
Q Consensus       415 ~~~vwi--vg~~~~--------~-----~~q-~~a~~G~~f~~~~~~~~~----------~-~---R--~dc~y~~~~a~  462 (529)
                      +++++|  |+...+        .     ++. ..+++|++++.-|-+||.          + +   +  .|+.+..+|..
T Consensus        84 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~  163 (478)
T 2y0c_A           84 HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEF  163 (478)
T ss_dssp             HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred             cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCCccEEEEEChhh
Confidence            676655  544221        1     111 246889999988878773          1 1   1  46677777776


Q ss_pred             ccCCCC
Q 009674          463 IIPPSL  468 (529)
Q Consensus       463 ~~P~~~  468 (529)
                      .-|+..
T Consensus       164 ~~eG~~  169 (478)
T 2y0c_A          164 LKEGAA  169 (478)
T ss_dssp             CCTTCH
T ss_pred             hcccce
Confidence            666664

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=87.91  E-value=0.76  Score=46.11  Aligned_cols=64  Identities=16%  Similarity=0.179  Sum_probs=44.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      .+|.++|| |  .+|+.+|..|++.|. +|.+  +++++++....++...     .... +.. +++++ ++++++|.
T Consensus         3 ~kI~VIGa-G--~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-i~~t~d~~a~~~aD~Vi~   76 (309)
T 1ur5_A            3 KKISIIGA-G--FVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVR-VTGTNNYADTANSDVIVV   76 (309)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeE-EEECCCHHHHCCCCEEEE
Confidence            47999999 8  999999999998886 8777  6777776544443332     1112 333 47766 88888663

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=87.86  E-value=1.1  Score=43.20  Aligned_cols=82  Identities=10%  Similarity=0.058  Sum_probs=53.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCc----CC
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD----LT  426 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~----~~  426 (529)
                      +|.++|+ |  .+|+++|+.|.+ |.+|.+  |++++.+.++++ +  .  .  ..+ +++  ++++++|+--.    +.
T Consensus         3 ~i~iiG~-G--~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-g--~--~--~~~-~~~~~~~~D~vi~~v~~~~~~~   70 (289)
T 2cvz_A            3 KVAFIGL-G--AMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-F--G--S--EAV-PLERVAEARVIFTCLPTTREVY   70 (289)
T ss_dssp             CEEEECC-S--TTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-H--C--C--EEC-CGGGGGGCSEEEECCSSHHHHH
T ss_pred             eEEEEcc-c--HHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-C--C--c--ccC-HHHHHhCCCEEEEeCCChHHHH
Confidence            5889997 5  999999999999 999988  888888888765 1  0  1  011 332  46666553111    11


Q ss_pred             h--hhh-hcCCCCceeecccccCcc
Q 009674          427 G--KEQ-ARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       427 ~--~~q-~~a~~G~~f~~~~~~~~~  448 (529)
                      .  ++. ..+++|+++++.+..++.
T Consensus        71 ~v~~~l~~~l~~~~~vv~~s~~~~~   95 (289)
T 2cvz_A           71 EVAEALYPYLREGTYWVDATSGEPE   95 (289)
T ss_dssp             HHHHHHTTTCCTTEEEEECSCCCHH
T ss_pred             HHHHHHHhhCCCCCEEEECCCCCHH
Confidence            0  111 246789999988765543

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=87.83  E-value=0.37  Score=47.13  Aligned_cols=79  Identities=9%  Similarity=0.041  Sum_probs=46.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEE-e--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--cCcCCh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVA-T--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDLTG  427 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~-l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~~~  427 (529)
                      +|.++|+ |  .+|+++++.|.+. .+|. +  |++++.++++++.+. .      .+++++  ++++++|+  -+..-.
T Consensus         4 ~I~iIG~-G--~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~------~~~~~~~~~~~DvVilav~~~~~~   72 (276)
T 2i76_A            4 VLNFVGT-G--TLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-K------AATLEKHPELNGVVFVIVPDRYIK   72 (276)
T ss_dssp             CCEEESC-C--HHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-C------CCSSCCCCC---CEEECSCTTTHH
T ss_pred             eEEEEeC-C--HHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-c------cCCHHHHHhcCCEEEEeCChHHHH
Confidence            5789996 7  9999999999987 7873 5  888999988776543 1      335553  56666552  222111


Q ss_pred             hhhhcC-CCCceeecccc
Q 009674          428 KEQARA-PKGTIFIPYTQ  444 (529)
Q Consensus       428 ~~q~~a-~~G~~f~~~~~  444 (529)
                      +-...+ ++|+++++.+-
T Consensus        73 ~v~~~l~~~~~ivi~~s~   90 (276)
T 2i76_A           73 TVANHLNLGDAVLVHCSG   90 (276)
T ss_dssp             HHHTTTCCSSCCEEECCS
T ss_pred             HHHHHhccCCCEEEECCC
Confidence            111112 67888888874

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=87.83  E-value=0.38  Score=47.19  Aligned_cols=29  Identities=24%  Similarity=0.319  Sum_probs=27.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +.|+|+||+|  -||+++++.|.++|.+|..
T Consensus         2 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~   30 (347)
T 1orr_A            2 AKLLITGGCG--FLGSNLASFALSQGIDLIV   30 (347)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             cEEEEeCCCc--hhHHHHHHHHHhCCCEEEE
Confidence            3699999999  9999999999999999988

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=87.80  E-value=0.51  Score=48.11  Aligned_cols=83  Identities=13%  Similarity=0.057  Sum_probs=56.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      ..++|.++|- |  .||+++|+.|...|.+|+.  ++.++.+..++. +.       ...++++  +.++++++      
T Consensus       144 ~g~tvGIIG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~-g~-------~~~~l~ell~~aDvV~l~~P~t~  212 (330)
T 4e5n_A          144 DNATVGFLGM-G--AIGLAMADRLQGWGATLQYHEAKALDTQTEQRL-GL-------RQVACSELFASSDFILLALPLNA  212 (330)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHH-TE-------EECCHHHHHHHCSEEEECCCCST
T ss_pred             CCCEEEEEee-C--HHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhc-Cc-------eeCCHHHHHhhCCEEEEcCCCCH
Confidence            3568999996 5  9999999999999999988  443222222111 11       1224543  55666552      


Q ss_pred             --cCcCChhhhhcCCCCceeeccccc
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQI  445 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~~  445 (529)
                        -..++.+....+++|++++.+++-
T Consensus       213 ~t~~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          213 DTLHLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             TTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             HHHHHhCHHHHhhCCCCcEEEECCCC
Confidence              235667888899999999999983

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=87.78  E-value=0.53  Score=50.67  Aligned_cols=90  Identities=14%  Similarity=0.135  Sum_probs=60.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh-hCccccccceeeeccccc--Cc---ceEEE--Ec
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL-RIPVEAQHNLVLSTSYAA--HK---TKIWL--VG  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~-~~~~~~~~~l~~~~~~~~--~~---~~vwi--vg  422 (529)
                      .++|.++|.-   .+|+++|+.|++.|.+|.+  |++++.+++++ +.+ +  ..+...+++++  ++   ++++|  |-
T Consensus        10 ~~~IgvIGlG---~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~-~--~gi~~~~s~~e~v~~l~~aDvVil~Vp   83 (497)
T 2p4q_A           10 SADFGLIGLA---VMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAK-G--KSIIGATSIEDFISKLKRPRKVMLLVK   83 (497)
T ss_dssp             CCSEEEECCS---HHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTT-T--SSEECCSSHHHHHHTSCSSCEEEECCC
T ss_pred             CCCEEEEeeH---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHccccc-C--CCeEEeCCHHHHHhcCCCCCEEEEEcC
Confidence            4578999976   9999999999999999999  89999999987 432 1  12122235553  33   76655  21


Q ss_pred             C--cCCh--hhh-hcCCCCceeecccccCcc
Q 009674          423 D--DLTG--KEQ-ARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       423 ~--~~~~--~~q-~~a~~G~~f~~~~~~~~~  448 (529)
                      +  .++.  +++ ..+++|.++++.+-..+.
T Consensus        84 ~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~  114 (497)
T 2p4q_A           84 AGAPVDALINQIVPLLEKGDIIIDGGNSHFP  114 (497)
T ss_dssp             SSHHHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred             ChHHHHHHHHHHHHhCCCCCEEEECCCCChh
Confidence            1  1111  112 246789999999886664

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=87.73  E-value=0.69  Score=48.51  Aligned_cols=84  Identities=7%  Similarity=0.012  Sum_probs=56.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc-----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-----  422 (529)
                      ..++|-++|.-   .||+++|+.|...|.+|+.  ++.++.+.. .+.+...      ..++++  +.++++++-     
T Consensus       190 ~gktvGIIGlG---~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~-~~~G~~~------~~~l~ell~~aDvV~l~~Plt~  259 (393)
T 2nac_A          190 EAMHVGTVAAG---RIGLAVLRRLAPFDVHLHYTDRHRLPESVE-KELNLTW------HATREDMYPVCDVVTLNCPLHP  259 (393)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHGGGTCEEEEECSSCCCHHHH-HHHTCEE------CSSHHHHGGGCSEEEECSCCCT
T ss_pred             CCCEEEEEeEC---HHHHHHHHHHHhCCCEEEEEcCCccchhhH-hhcCcee------cCCHHHHHhcCCEEEEecCCch
Confidence            45689999976   9999999999999999988  443332222 1111111      124443  566675532     


Q ss_pred             ---CcCChhhhhcCCCCceeeccccc
Q 009674          423 ---DDLTGKEQARAPKGTIFIPYTQI  445 (529)
Q Consensus       423 ---~~~~~~~q~~a~~G~~f~~~~~~  445 (529)
                         ..++.+.+..|++|+++|.+++-
T Consensus       260 ~t~~li~~~~l~~mk~gailIN~aRG  285 (393)
T 2nac_A          260 ETEHMINDETLKLFKRGAYIVNTARG  285 (393)
T ss_dssp             TTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             HHHHHhhHHHHhhCCCCCEEEECCCc
Confidence               34556778899999999999993

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=87.72  E-value=1.1  Score=44.67  Aligned_cols=42  Identities=14%  Similarity=0.134  Sum_probs=36.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  396 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~  396 (529)
                      ...+|.++|+-   .+|.++|..|++.|.+|++ +++++++.++++
T Consensus        18 ~~~kI~IiGaG---a~G~~~a~~L~~~G~~V~l~~~~~~~~~i~~~   60 (318)
T 3hwr_A           18 QGMKVAIMGAG---AVGCYYGGMLARAGHEVILIARPQHVQAIEAT   60 (318)
T ss_dssp             --CEEEEESCS---HHHHHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred             cCCcEEEECcC---HHHHHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence            45689999995   9999999999999999998 888899999875

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=87.65  E-value=0.53  Score=47.36  Aligned_cols=28  Identities=18%  Similarity=0.226  Sum_probs=26.8

Q ss_pred             EEEEecccCchhhHHHHHHHHh-ccCcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLC-QMGIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~-~~~~~v~l  384 (529)
                      .|+|+|++|  -||+++|+.|. ++|.+|.+
T Consensus         4 ~vlVTGatG--~iG~~l~~~L~~~~g~~V~~   32 (397)
T 1gy8_A            4 RVLVCGGAG--YIGSHFVRALLRDTNHSVVI   32 (397)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHHCCCEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHHhCCCEEEE
Confidence            699999999  99999999999 99999988

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=87.61  E-value=0.54  Score=47.13  Aligned_cols=39  Identities=13%  Similarity=0.194  Sum_probs=31.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc-EEEe--c--chhhHHHHHh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI-KVAT--I--CKDDYEKLKL  395 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~--~~~~~~~l~~  395 (529)
                      +|+|+||||  -||+++++.|.++|. +|..  |  +.+.++++-+
T Consensus         2 ~VlVtGatG--~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~   45 (369)
T 3st7_A            2 NIVITGAKG--FVGKNLKADLTSTTDHHIFEVHRQTKEEELESALL   45 (369)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHH
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhc
Confidence            699999999  999999999999998 8887  4  4455555433

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=87.54  E-value=0.32  Score=49.02  Aligned_cols=63  Identities=21%  Similarity=0.202  Sum_probs=43.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc-----cccceeee-ccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  421 (529)
                      +|.++|| |  .+|+++|..|+..+. .+.|  +++++++....++...     .... +.. +++++ ++++++|.
T Consensus         1 KI~IiGa-G--~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-i~~t~d~~a~~~aD~Vi~   73 (308)
T 2d4a_B            1 MITILGA-G--KVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIR-ISGSNSYEDMRGSDIVLV   73 (308)
T ss_dssp             CEEEECC-S--HHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CEEEECc-C--HHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeE-EEECCCHHHhCCCCEEEE
Confidence            4889999 8  999999999998787 4777  7777776554444332     1112 344 47766 89988774

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=87.51  E-value=0.61  Score=46.92  Aligned_cols=78  Identities=13%  Similarity=0.162  Sum_probs=55.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------  422 (529)
                      .++|.++|. |  .||+++|+.|...|.+|..  |+.+  +    +   +.    ....++++  +.++++++-      
T Consensus       124 g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~dr~~~--~----~---~~----~~~~~l~ell~~aDvV~l~~P~~~~  187 (303)
T 1qp8_A          124 GEKVAVLGL-G--EIGTRVGKILAALGAQVRGFSRTPK--E----G---PW----RFTNSLEEALREARAAVCALPLNKH  187 (303)
T ss_dssp             TCEEEEESC-S--THHHHHHHHHHHTTCEEEEECSSCC--C----S---SS----CCBSCSHHHHTTCSEEEECCCCSTT
T ss_pred             CCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEECCCcc--c----c---Cc----ccCCCHHHHHhhCCEEEEeCcCchH
Confidence            457999996 5  9999999999999999988  3332  1    1   11    11235554  667776522      


Q ss_pred             --CcCChhhhhcCCCCceeecccccC
Q 009674          423 --DDLTGKEQARAPKGTIFIPYTQIP  446 (529)
Q Consensus       423 --~~~~~~~q~~a~~G~~f~~~~~~~  446 (529)
                        ..++.+....+++|++++++++-+
T Consensus       188 t~~~i~~~~l~~mk~gailin~srg~  213 (303)
T 1qp8_A          188 TRGLVKYQHLALMAEDAVFVNVGRAE  213 (303)
T ss_dssp             TTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             HHHHhCHHHHhhCCCCCEEEECCCCc
Confidence              245567888999999999999843

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=87.45  E-value=0.85  Score=48.13  Aligned_cols=46  Identities=17%  Similarity=0.135  Sum_probs=36.9

Q ss_pred             HHHHHhcC---------cCCCcEEEEecccCchhhHHHHHHHHhc-cCcEEEe--cchhh
Q 009674          342 AAVVVNSL---------PKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT--ICKDD  389 (529)
Q Consensus       342 aavv~~~i---------~~~~~~V~~~Gatg~~kig~ava~~L~~-~~~~v~l--~~~~~  389 (529)
                      .+-|.|||         .++.+.++|+|+++  -||+|+|+.|++ .|.+|.+  +++++
T Consensus        27 ~~~v~~qi~~~~~~~~~~~~gKvaLVTGas~--GIG~AiA~~LA~g~GA~Vv~~~~~~~~   84 (405)
T 3zu3_A           27 EANVKKQIDYVTTEGPIANGPKRVLVIGAST--GYGLAARITAAFGCGADTLGVFFERPG   84 (405)
T ss_dssp             HHHHHHHHHHHHHHCCCTTCCSEEEEESCSS--HHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             HHHHHHHHHHHHhcCCcCCCCCEEEEeCcch--HHHHHHHHHHHHhcCCEEEEEeCCchh
Confidence            44566666         24688899999997  999999999999 9999987  55443

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=87.43  E-value=0.39  Score=51.81  Aligned_cols=43  Identities=21%  Similarity=0.167  Sum_probs=36.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~  398 (529)
                      .+.|+++|| |  -+|+|+|..|++.|.+|.+  |+.++.++++++++
T Consensus       364 ~k~vlV~Ga-G--Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~  408 (523)
T 2o7s_A          364 SKTVVVIGA-G--GAGKALAYGAKEKGAKVVIANRTYERALELAEAIG  408 (523)
T ss_dssp             --CEEEECC-S--HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT
T ss_pred             CCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC
Confidence            457999999 5  8999999999999999888  89999999988874

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=87.42  E-value=0.91  Score=45.76  Aligned_cols=83  Identities=12%  Similarity=0.111  Sum_probs=56.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc-----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-----  422 (529)
                      ..++|.++|. |  .||+++|+.|...|.+|..  ++.++.+ . .+.+..       ..++++  +.++++++-     
T Consensus       141 ~g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~-~~~g~~-------~~~l~ell~~aDvVvl~~P~~~  208 (313)
T 2ekl_A          141 AGKTIGIVGF-G--RIGTKVGIIANAMGMKVLAYDILDIREK-A-EKINAK-------AVSLEELLKNSDVISLHVTVSK  208 (313)
T ss_dssp             TTCEEEEESC-S--HHHHHHHHHHHHTTCEEEEECSSCCHHH-H-HHTTCE-------ECCHHHHHHHCSEEEECCCCCT
T ss_pred             CCCEEEEEee-C--HHHHHHHHHHHHCCCEEEEECCCcchhH-H-HhcCce-------ecCHHHHHhhCCEEEEeccCCh
Confidence            3568999996 5  9999999999999999988  5544421 1 222211       124443  466665522     


Q ss_pred             ---CcCChhhhhcCCCCceeecccccC
Q 009674          423 ---DDLTGKEQARAPKGTIFIPYTQIP  446 (529)
Q Consensus       423 ---~~~~~~~q~~a~~G~~f~~~~~~~  446 (529)
                         ..++.+....+++|++++++++-+
T Consensus       209 ~t~~li~~~~l~~mk~ga~lIn~arg~  235 (313)
T 2ekl_A          209 DAKPIIDYPQFELMKDNVIIVNTSRAV  235 (313)
T ss_dssp             TSCCSBCHHHHHHSCTTEEEEESSCGG
T ss_pred             HHHHhhCHHHHhcCCCCCEEEECCCCc
Confidence               234566778899999999999833

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=87.31  E-value=1.1  Score=45.28  Aligned_cols=65  Identities=18%  Similarity=0.251  Sum_probs=43.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc--ccceeeec--cccc-CcceEEEE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA--QHNLVLST--SYAA-HKTKIWLV  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~--~~~l~~~~--~~~~-~~~~vwiv  421 (529)
                      ..+|.++|| |  .||.+++..|...+.  .+.|  +++++.+....++....  ..+ +.++  ++++ ++++++|+
T Consensus         5 ~~KI~IiGa-G--~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~-~~v~~~~~~a~~~aDvVii   78 (318)
T 1ez4_A            5 HQKVVLVGD-G--AVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAP-KKIYSGEYSDCKDADLVVI   78 (318)
T ss_dssp             BCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCC-CEEEECCGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCC-eEEEECCHHHhCCCCEEEE
Confidence            468999999 8  999999999997775  6666  77777775444433321  111 1232  5556 88888775

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=87.28  E-value=0.44  Score=44.93  Aligned_cols=82  Identities=16%  Similarity=0.131  Sum_probs=51.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcCc--C
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD--L  425 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~--~  425 (529)
                      ...+|.++| +|  .+|+++|+.|.+.|.+|.+  |++++.++++++   +     +...++++  ++++++|+--.  .
T Consensus        27 ~~~~I~iiG-~G--~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~---g-----~~~~~~~~~~~~~DvVi~av~~~~   95 (215)
T 2vns_A           27 EAPKVGILG-SG--DFARSLATRLVGSGFKVVVGSRNPKRTARLFPS---A-----AQVTFQEEAVSSPEVIFVAVFREH   95 (215)
T ss_dssp             --CCEEEEC-CS--HHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT---T-----SEEEEHHHHTTSCSEEEECSCGGG
T ss_pred             CCCEEEEEc-cC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc---C-----CceecHHHHHhCCCEEEECCChHH
Confidence            345799999 67  9999999999999999888  888888877553   1     11224443  56777663111  0


Q ss_pred             Chh--hhhcCCCCceeecccc
Q 009674          426 TGK--EQARAPKGTIFIPYTQ  444 (529)
Q Consensus       426 ~~~--~q~~a~~G~~f~~~~~  444 (529)
                      .++  +.....+|+++++.+.
T Consensus        96 ~~~v~~l~~~~~~~~vv~~s~  116 (215)
T 2vns_A           96 YSSLCSLSDQLAGKILVDVSN  116 (215)
T ss_dssp             SGGGGGGHHHHTTCEEEECCC
T ss_pred             HHHHHHHHHhcCCCEEEEeCC
Confidence            000  0111226777777775

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=87.26  E-value=1.1  Score=45.41  Aligned_cols=42  Identities=17%  Similarity=0.157  Sum_probs=36.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++.+.+++
T Consensus       170 ~g~~vlV~Gasg--giG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  213 (351)
T 1yb5_A          170 AGESVLVHGASG--GVGLAACQIARAYGLKILGTAGTEEGQKIVLQ  213 (351)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             CcCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Confidence            456899999998  9999999999999999887  78888886543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=87.26  E-value=0.24  Score=48.24  Aligned_cols=29  Identities=14%  Similarity=0.204  Sum_probs=25.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+|+|++|  -||+++|+.|.++|..+.+
T Consensus         2 ~~vlVTGatG--~iG~~l~~~L~~~g~~v~~   30 (313)
T 3ehe_A            2 SLIVVTGGAG--FIGSHVVDKLSESNEIVVI   30 (313)
T ss_dssp             -CEEEETTTS--HHHHHHHHHHTTTSCEEEE
T ss_pred             CEEEEECCCc--hHHHHHHHHHHhCCCEEEE
Confidence            3699999999  9999999999999966666

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=87.18  E-value=0.88  Score=44.64  Aligned_cols=44  Identities=14%  Similarity=0.185  Sum_probs=37.5

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      .+..++|++.|++|  .||.++++.+...|.+|..  +++++++.+++
T Consensus       123 ~~~g~~vlV~Ga~G--~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  168 (302)
T 1iz0_A          123 ARPGEKVLVQAAAG--ALGTAAVQVARAMGLRVLAAASRPEKLALPLA  168 (302)
T ss_dssp             CCTTCEEEESSTTB--HHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH
T ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence            45567899999998  9999999998889999887  78888887754

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=87.12  E-value=0.84  Score=45.43  Aligned_cols=63  Identities=14%  Similarity=0.131  Sum_probs=44.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhCcccc---ccceeee--ccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRIPVEA---QHNLVLS--TSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~~~~~l~~~~~~~~---~~~l~~~--~~~~~-~~~~vwiv  421 (529)
                      +|.++| .|  .+|.++|..|++.|  .+|.+  +++++.+.++.++....   ... +.+  +++++ ++++++|+
T Consensus         3 kI~VIG-aG--~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~d~~~~~~aDvVii   75 (309)
T 1hyh_A            3 KIGIIG-LG--NVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAH-GNIVINDWAALADADVVIS   75 (309)
T ss_dssp             EEEEEC-CS--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSC-CEEEESCGGGGTTCSEEEE
T ss_pred             EEEEEC-CC--HHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCC-eEEEeCCHHHhCCCCEEEE
Confidence            689999 56  99999999999988  57888  88888888776543211   011 222  46655 78877663

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=87.00  E-value=1  Score=45.97  Aligned_cols=84  Identities=14%  Similarity=0.103  Sum_probs=57.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEc-----
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  422 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-----  422 (529)
                      ..++|.++|- |  .||+++|+.|...|.+|+.  ++.++ +.. .+.+.+       ..++++  +.++++++-     
T Consensus       164 ~g~tvgIIGl-G--~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~-~~~g~~-------~~~l~ell~~aDvV~l~~P~t~  231 (335)
T 2g76_A          164 NGKTLGILGL-G--RIGREVATRMQSFGMKTIGYDPIISP-EVS-ASFGVQ-------QLPLEEIWPLCDFITVHTPLLP  231 (335)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHTTTCEEEEECSSSCH-HHH-HHTTCE-------ECCHHHHGGGCSEEEECCCCCT
T ss_pred             CcCEEEEEeE-C--HHHHHHHHHHHHCCCEEEEECCCcch-hhh-hhcCce-------eCCHHHHHhcCCEEEEecCCCH
Confidence            4568999996 5  9999999999999999988  44333 221 222211       124443  566675522     


Q ss_pred             ---CcCChhhhhcCCCCceeecccccCc
Q 009674          423 ---DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       423 ---~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                         ..++.+.+..+++|++++++++-+.
T Consensus       232 ~t~~li~~~~l~~mk~gailIN~arg~v  259 (335)
T 2g76_A          232 STTGLLNDNTFAQCKKGVRVVNCARGGI  259 (335)
T ss_dssp             TTTTSBCHHHHTTSCTTEEEEECSCTTS
T ss_pred             HHHHhhCHHHHhhCCCCcEEEECCCccc
Confidence               2455678889999999999999443

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=86.99  E-value=0.68  Score=46.97  Aligned_cols=55  Identities=13%  Similarity=0.049  Sum_probs=41.8

Q ss_pred             hhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          339 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       339 sltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      -+||+-.+...  .+..+.|+++||+|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       148 ~~ta~~al~~~~~~~~g~~VlV~Ga~G--~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~  206 (362)
T 2c0c_A          148 GTTAYISLKELGGLSEGKKVLVTAAAG--GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS  206 (362)
T ss_dssp             HHHHHHHHHHHTCCCTTCEEEETTTTB--TTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            34555555332  23456899999998  9999999999989999887  78888887765

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=86.98  E-value=0.64  Score=49.23  Aligned_cols=44  Identities=11%  Similarity=0.302  Sum_probs=34.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhhC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI  397 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~--~~~~~~l~~~~  397 (529)
                      ..+.++|+|++|  -||+++|++|+++|.+|.+  |+  .++++++.+++
T Consensus       212 ~gk~~LVTGgsg--GIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~  259 (454)
T 3u0b_A          212 DGKVAVVTGAAR--GIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV  259 (454)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCEEEEeCCch--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc
Confidence            457899999998  9999999999999999998  43  34445444443

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=86.97  E-value=0.72  Score=46.93  Aligned_cols=82  Identities=12%  Similarity=0.108  Sum_probs=55.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      ..++|.++|. |  .||+++|+.|...|.+|+.  ++.++ +..+ +.+       +...++++  ++++++++      
T Consensus       145 ~g~~vgIIG~-G--~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g-------~~~~~l~e~l~~aDiVil~vp~~~  212 (333)
T 2d0i_A          145 YGKKVGILGM-G--AIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-ELK-------ARYMDIDELLEKSDIVILALPLTR  212 (333)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-HHT-------EEECCHHHHHHHCSEEEECCCCCT
T ss_pred             CcCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcC-------ceecCHHHHHhhCCEEEEcCCCCh
Confidence            3467999996 5  9999999999999999988  55554 3221 111       11224543  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccccC
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQIP  446 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~~~  446 (529)
                        ...++.+....+++| +++..++-+
T Consensus       213 ~t~~~i~~~~~~~mk~g-ilin~srg~  238 (333)
T 2d0i_A          213 DTYHIINEERVKKLEGK-YLVNIGRGA  238 (333)
T ss_dssp             TTTTSBCHHHHHHTBTC-EEEECSCGG
T ss_pred             HHHHHhCHHHHhhCCCC-EEEECCCCc
Confidence              224555567788999 999999843

>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}

Probab=86.90  E-value=2.9  Score=43.10  Aligned_cols=159  Identities=19%  Similarity=0.252  Sum_probs=97.8

Q ss_pred             HHHcCCcEEEecc----cccccccc-------cCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 009674          296 ADAKGVKVISLGL----LNQGEELN-------RNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  346 (529)
Q Consensus       296 A~k~G~kv~~LG~----ln~~e~ln-------~~g~~~~~k~p~---------~L~irvv~Gns---------ltaavv~  346 (529)
                      +.++|.+++.|+.    +.++|.+-       ...-..+.|+|.         ..+|+|+.|-+         +=..++.
T Consensus        85 ~~~LGg~~i~l~~~~ssl~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~  164 (339)
T 4a8t_A           85 MEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMV  164 (339)
T ss_dssp             HHHTTCEEEEECCC-CCSSSSSCHHHHHHHHHHHCSEEEEECSSHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEECCCCCcCcHHHHHHHHHHH
Confidence            4579999999975    44445443       334467788876         35689998754         1256788


Q ss_pred             hcCc----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH------HHHHhhCccccccceeeec-cccc-C
Q 009674          347 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY------EKLKLRIPVEAQHNLVLST-SYAA-H  414 (529)
Q Consensus       347 ~~i~----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~------~~l~~~~~~~~~~~l~~~~-~~~~-~  414 (529)
                      +..|    -+..+|+++|..+  -+++..+.+|++-|.++.+-.++.|      .+..++...+.+.. +.++ +.++ +
T Consensus       165 e~~~~G~~l~glkva~vGD~~--rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~-v~~~~d~~av~  241 (339)
T 4a8t_A          165 EHLPEGKKLEDCKVVFVGDAT--QVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGS-FLVTDDASSVE  241 (339)
T ss_dssp             HTCCTTCCGGGCEEEEESSCC--HHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCE-EEEECCGGGGT
T ss_pred             HHhhcCCCCCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCE-EEEECChhHHc
Confidence            8873    2456999999985  9999999999999999998333322      11111111222223 3344 5556 7


Q ss_pred             cceEEEEcCcCCh---hhh--hcCCCCceeec-ccccCcc---CCCCCce-eecCCc
Q 009674          415 KTKIWLVGDDLTG---KEQ--ARAPKGTIFIP-YTQIPPR---KLRKDCF-YHSTPA  461 (529)
Q Consensus       415 ~~~vwivg~~~~~---~~q--~~a~~G~~f~~-~~~~~~~---~~R~dc~-y~~~~a  461 (529)
                      +++|+..+-|.+-   ++|  ++..   .|-| | |++++   ..++|+. .+.+|+
T Consensus       242 ~aDvvytd~w~smg~~~~~~~er~~---~~~~~y-~vt~ell~~ak~dai~mHcLPa  294 (339)
T 4a8t_A          242 GADFLYTDVWYGLYEAELSEEERMK---VFYPKY-QVNQEMMDRAGANCKFMHCLPA  294 (339)
T ss_dssp             TCSEEEECCSSCCTTSCCCHHHHHH---HHTTTT-CBCHHHHHHHCTTCEEEECSCC
T ss_pred             CCCEEEecCcccCCchhhhhHHHHH---Hhcccc-ccCHHHHHhcCCCcEEECCCCC
Confidence            8888777555431   211  1111   1334 4 47777   3567876 677775

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=86.87  E-value=0.71  Score=48.72  Aligned_cols=32  Identities=13%  Similarity=0.155  Sum_probs=28.7

Q ss_pred             CCCcEEEEecccCchhhHHH--HHHHHhccCcEEEe
Q 009674          351 KTTAHVLLRGTVTANKVANA--VASSLCQMGIKVAT  384 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~a--va~~L~~~~~~v~l  384 (529)
                      ++.+.|+|+|+++  -||+|  +|+.|+++|.+|.+
T Consensus        58 ~~gK~aLVTGass--GIG~A~aia~ala~~Ga~Vi~   91 (418)
T 4eue_A           58 RGPKKVLIVGASS--GFGLATRISVAFGGPEAHTIG   91 (418)
T ss_dssp             CCCSEEEEESCSS--HHHHHHHHHHHHSSSCCEEEE
T ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHHHhCCCEEEE
Confidence            4577899999997  99999  99999999999977

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=86.83  E-value=1.1  Score=45.01  Aligned_cols=87  Identities=14%  Similarity=0.104  Sum_probs=55.5

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-ccc----c----CcceEE
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYA----A----HKTKIW  419 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~----~----~~~~vw  419 (529)
                      +..+.|++.|++|  -||.++++.+...|.+|..  +++++++.+++. +.+.-   +... ++.    +    ...+++
T Consensus       158 ~~g~~VlV~Gasg--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~~v---~~~~~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          158 RAGETVLVLGAAG--GIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV-GADIV---LPLEEGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             CTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-TCSEE---EESSTTHHHHHHHHTTTSCEEEE
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCcEE---ecCchhHHHHHHHHhCCCCceEE
Confidence            3467899999998  9999999999999999987  788888877653 32221   1111 221    1    245776


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 009674          420 L--VGDDLTGKEQARAPKGTIFIPYT  443 (529)
Q Consensus       420 i--vg~~~~~~~q~~a~~G~~f~~~~  443 (529)
                      +  +|...-.+-...+.+|-.++.+.
T Consensus       232 id~~g~~~~~~~~~~l~~~G~iv~~G  257 (342)
T 4eye_A          232 VDPIGGPAFDDAVRTLASEGRLLVVG  257 (342)
T ss_dssp             EESCC--CHHHHHHTEEEEEEEEEC-
T ss_pred             EECCchhHHHHHHHhhcCCCEEEEEE
Confidence            6  55443344444556666676665

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=86.83  E-value=0.6  Score=51.27  Aligned_cols=37  Identities=22%  Similarity=0.229  Sum_probs=31.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE  391 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~  391 (529)
                      .++|+|+||||  -||+++|+.|.++ |.+|..  |+.++.+
T Consensus       315 ~~~VLVTGatG--~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~  354 (660)
T 1z7e_A          315 RTRVLILGVNG--FIGNHLTERLLREDHYEVYGLDIGSDAIS  354 (660)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHSSSEEEEEEESCCTTTG
T ss_pred             CceEEEEcCCc--HHHHHHHHHHHhcCCCEEEEEEcCchhhh
Confidence            35799999999  9999999999987 888887  6665543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=86.73  E-value=0.67  Score=48.23  Aligned_cols=43  Identities=19%  Similarity=0.228  Sum_probs=36.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC-c--EEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMG-I--KVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~-~--~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ++|+++|| |  .||+++|+.|++.| +  +|.+  |+.++.+++.++++.
T Consensus         2 ~kVlIiGa-G--giG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~   49 (405)
T 4ina_A            2 AKVLQIGA-G--GVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKA   49 (405)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhh
Confidence            47999999 8  89999999999887 3  7877  999999999887653

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=86.73  E-value=0.39  Score=47.81  Aligned_cols=29  Identities=10%  Similarity=0.295  Sum_probs=26.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC-cEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l  384 (529)
                      +.|+|+||||  -||+++++.|.++| .+|..
T Consensus        47 ~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~   76 (357)
T 2x6t_A           47 RMIIVTGGAG--FIGSNIVKALNDKGITDILV   76 (357)
T ss_dssp             -CEEEETTTS--HHHHHHHHHHHHTTCCCEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCcEEEE
Confidence            5799999999  99999999999999 78877

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=86.67  E-value=1.1  Score=45.07  Aligned_cols=42  Identities=14%  Similarity=0.167  Sum_probs=36.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~~  395 (529)
                      ..+.|+++|+.|  -||.++++.+.+. |.+|..  +++++++.+++
T Consensus       170 ~g~~vlV~Gagg--~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~  214 (347)
T 1jvb_A          170 PTKTLLVVGAGG--GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR  214 (347)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEEECCCc--cHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence            456899999986  9999999999988 999887  78888887754

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=86.65  E-value=0.7  Score=44.88  Aligned_cols=40  Identities=15%  Similarity=0.193  Sum_probs=35.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      .+|.++|+ |  .+|+++|..|.+.|.+|++  |++++.+.++++
T Consensus         4 m~i~iiG~-G--~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~   45 (316)
T 2ew2_A            4 MKIAIAGA-G--AMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN   45 (316)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CeEEEECc-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC
Confidence            36999997 6  9999999999999999998  888999998876

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=86.63  E-value=0.61  Score=49.84  Aligned_cols=41  Identities=27%  Similarity=0.259  Sum_probs=35.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~~~  396 (529)
                      .++|+++|| |  .+|+++|+.|++. |.+|++  |+.++.++++++
T Consensus        23 ~k~VlIiGA-G--giG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~   66 (467)
T 2axq_A           23 GKNVLLLGS-G--FVAQPVIDTLAANDDINVTVACRTLANAQALAKP   66 (467)
T ss_dssp             CEEEEEECC-S--TTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG
T ss_pred             CCEEEEECC-h--HHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh
Confidence            457999998 8  9999999999987 788888  888999988765

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=86.59  E-value=0.72  Score=49.08  Aligned_cols=87  Identities=16%  Similarity=0.128  Sum_probs=58.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--Cc---ceEEEE--cC-
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWLV--GD-  423 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~---~~vwiv--g~-  423 (529)
                      .+|.++|+ |  .+|+++|+.|++.|.+|.+  |++++.++++++.+.   ..+...+++++  ++   ++++|+  -. 
T Consensus         6 ~~IgvIG~-G--~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~---~gi~~~~s~~e~v~~l~~aDvVilavp~~   79 (474)
T 2iz1_A            6 ANFGVVGM-A--VMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQD---KNLVFTKTLEEFVGSLEKPRRIMLMVQAG   79 (474)
T ss_dssp             BSEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTT---SCEEECSSHHHHHHTBCSSCEEEECCCTT
T ss_pred             CcEEEEee-H--HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcC---CCeEEeCCHHHHHhhccCCCEEEEEccCc
Confidence            56999996 4  9999999999999999988  889999999887531   12122235654  33   777553  11 


Q ss_pred             -cCCh--hhh-hcCCCCceeecccccC
Q 009674          424 -DLTG--KEQ-ARAPKGTIFIPYTQIP  446 (529)
Q Consensus       424 -~~~~--~~q-~~a~~G~~f~~~~~~~  446 (529)
                       .++.  ++. ..+++|+++++.+...
T Consensus        80 ~~v~~vl~~l~~~l~~g~iiId~s~~~  106 (474)
T 2iz1_A           80 AATDATIKSLLPLLDIGDILIDGGNTH  106 (474)
T ss_dssp             HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence             1111  111 2467899999988644

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=86.53  E-value=0.53  Score=45.72  Aligned_cols=84  Identities=13%  Similarity=0.132  Sum_probs=54.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--cCcCChh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDLTGK  428 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~~~~  428 (529)
                      .+|.++|+ |  .+|+++|+.|.+.|.+|.+ .++++.++++++ +      +...+++++  ++++++|+  .+...-+
T Consensus         4 m~i~iiG~-G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-g------~~~~~~~~~~~~~~D~vi~~vp~~~~~~   73 (295)
T 1yb4_A            4 MKLGFIGL-G--IMGSPMAINLARAGHQLHVTTIGPVADELLSL-G------AVNVETARQVTEFADIIFIMVPDTPQVE   73 (295)
T ss_dssp             CEEEECCC-S--TTHHHHHHHHHHTTCEEEECCSSCCCHHHHTT-T------CBCCSSHHHHHHTCSEEEECCSSHHHHH
T ss_pred             CEEEEEcc-C--HHHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc-C------CcccCCHHHHHhcCCEEEEECCCHHHHH
Confidence            36899995 5  9999999999999999988 545567777654 1      011224543  56677663  2211111


Q ss_pred             h-------h-hcCCCCceeecccccCc
Q 009674          429 E-------Q-ARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       429 ~-------q-~~a~~G~~f~~~~~~~~  447 (529)
                      +       . ..+++|+++++.+..+|
T Consensus        74 ~v~~~~~~l~~~l~~~~~vv~~s~~~~  100 (295)
T 1yb4_A           74 DVLFGEHGCAKTSLQGKTIVDMSSISP  100 (295)
T ss_dssp             HHHHSTTSSTTSCCTTEEEEECSCCCH
T ss_pred             HHHhCchhHhhcCCCCCEEEECCCCCH
Confidence            1       1 13678999998887654

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=86.49  E-value=0.67  Score=45.11  Aligned_cols=97  Identities=18%  Similarity=0.250  Sum_probs=63.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeee-ccccc--CcceEEEEc--CcCCh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLS-TSYAA--HKTKIWLVG--DDLTG  427 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~-~~~~~--~~~~vwivg--~~~~~  427 (529)
                      +|.++|+ |  .+|+++|+.|.+.|.+|.+  |++++.+.++++ +       +.+ ++.++  ++++++|+-  +.-.-
T Consensus         2 ~i~iiG~-G--~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g-------~~~~~~~~~~~~~~Dvvi~~vp~~~~~   70 (296)
T 2gf2_A            2 PVGFIGL-G--NMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDA-G-------EQVVSSPADVAEKADRIITMLPTSINA   70 (296)
T ss_dssp             CEEEECC-S--TTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTT-T-------CEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             eEEEEec-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-C-------CeecCCHHHHHhcCCEEEEeCCCHHHH
Confidence            5789996 5  9999999999999999988  888888888764 1       122 25543  566775531  11110


Q ss_pred             hh-h-------hcCCCCceeecccccCccC-------CC-CCceeecCCcc
Q 009674          428 KE-Q-------ARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAM  462 (529)
Q Consensus       428 ~~-q-------~~a~~G~~f~~~~~~~~~~-------~R-~dc~y~~~~a~  462 (529)
                      ++ .       ..+++|+++++.+-+++..       ++ +.+.|+..|..
T Consensus        71 ~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~~p~~  121 (296)
T 2gf2_A           71 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVS  121 (296)
T ss_dssp             HHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred             HHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCCC
Confidence            11 1       1357899999987777751       11 34456666643

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=86.48  E-value=0.48  Score=57.50  Aligned_cols=43  Identities=23%  Similarity=0.221  Sum_probs=35.7

Q ss_pred             CcEEEEecccCchh-hHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 009674          353 TAHVLLRGTVTANK-VANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  397 (529)
Q Consensus       353 ~~~V~~~Gatg~~k-ig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~  397 (529)
                      .+.|+|+|+++  - ||+++|+.|+++|.+|.+   |+.++.+++.+++
T Consensus       476 GKvALVTGASg--GGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL  522 (1688)
T 2pff_A          476 DKYVLITGAGK--GSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSI  522 (1688)
T ss_dssp             SCCEEECSCSS--SSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHT
T ss_pred             CCEEEEECCCh--HHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHH
Confidence            46799999997  6 999999999999999988   6666766665555

>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1

Probab=86.48  E-value=7.2  Score=39.52  Aligned_cols=157  Identities=16%  Similarity=0.258  Sum_probs=96.8

Q ss_pred             HHHcCCcEEEeccc-----cccc-------ccccCCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 009674          296 ADAKGVKVISLGLL-----NQGE-------ELNRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV  344 (529)
Q Consensus       296 A~k~G~kv~~LG~l-----n~~e-------~ln~~g~~~~~k~p~---------~L~irvv~Gns----------ltaav  344 (529)
                      +.++|.+++.|+.=     .++|       -|....-..+.|+|.         ..+++|+.|-+          +=..+
T Consensus        66 ~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVINag~g~~~HPtQ~LaDl~T  145 (308)
T 1ml4_A           66 MHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYT  145 (308)
T ss_dssp             HHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTTCSEEEEEESSTTHHHHHHHTCSSCEEEEEETTSCCHHHHHHHHHH
T ss_pred             HHHhCCeEEEeCCCccccccCCCCHHHHHHHHHHhCcEEEEecCChhHHHHHHHhCCCCEEeCccCCccCcHHHHHHHHH
Confidence            45799999999643     3333       356667778888876         35688887432          22456


Q ss_pred             HHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhCccccccceeeec-cccc--Ccce
Q 009674          345 VVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYAA--HKTK  417 (529)
Q Consensus       345 v~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~~--~~~~  417 (529)
                      +.+.... +..+|+.+|...-|-+++..+.+|++-|.+|.+-.++.|+   .+.+.+. +.+.. +.++ +.++  ++++
T Consensus       146 i~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~eav~~aD  223 (308)
T 1ml4_A          146 IKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELR-EKGMK-VVETTTLEDVIGKLD  223 (308)
T ss_dssp             HHHHSSCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHH-HTTCC-EEEESCTHHHHTTCS
T ss_pred             HHHHhCCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHH-HcCCe-EEEEcCHHHHhcCCC
Confidence            6665533 4468999998621279999999999999999994444331   1222211 22223 3344 7764  8899


Q ss_pred             EEEEcCcCCh-----hhhhcCCCCceeecccccCcc---CCCCCce-eecCC
Q 009674          418 IWLVGDDLTG-----KEQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTP  460 (529)
Q Consensus       418 vwivg~~~~~-----~~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~  460 (529)
                      |+..+-|-++     +|..+...+     | |++++   ..++|+. .|.+|
T Consensus       224 vvyt~~~q~er~~~~~~~~~~~~~-----y-~v~~~ll~~a~~~ai~mH~lP  269 (308)
T 1ml4_A          224 VLYVTRIQKERFPDEQEYLKVKGS-----Y-QVNLKVLEKAKDELRIMHPLP  269 (308)
T ss_dssp             EEEECCCCGGGSSSHHHHHTTTTC-----C-CBCTTGGGGSCTTCEEECCSC
T ss_pred             EEEECCccccccCCHHHHHHHhcC-----c-ccCHHHHhhcCCCCEEECCCC
Confidence            9887655331     333332223     3 47777   3457885 66666

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=86.47  E-value=0.53  Score=46.05  Aligned_cols=30  Identities=13%  Similarity=0.306  Sum_probs=27.5

Q ss_pred             CcEEEEecc----------------cCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGT----------------VTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Ga----------------tg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+.|+++|+                +|  ++|+|+|++|+++|.+|++
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG--~mG~aiA~~~~~~Ga~V~l   48 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTG--HLGKIITETLLSAGYEVCL   48 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCC--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCC--HHHHHHHHHHHHCCCEEEE
Confidence            357899988                78  9999999999999999999

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=86.42  E-value=0.49  Score=44.84  Aligned_cols=30  Identities=27%  Similarity=0.275  Sum_probs=27.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc-cCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~-~~~~v~l  384 (529)
                      .+.|+++|++|  -||+++|+.|++ .|.+|.+
T Consensus         4 ~k~vlITGas~--gIG~~~a~~l~~~~g~~v~~   34 (244)
T 4e4y_A            4 MANYLVTGGSK--GIGKAVVELLLQNKNHTVIN   34 (244)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHTTSTTEEEEE
T ss_pred             CCeEEEeCCCC--hHHHHHHHHHHhcCCcEEEE
Confidence            35799999998  999999999998 8988888

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	529
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.81
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.79
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.11
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.91
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.87
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.86
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.85
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.8
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.8
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.74
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.7
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.67
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.65
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.65
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.64
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.63
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.62
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.61
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.61
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.61
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.59
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.59
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.57
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.56
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.56
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.55
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	96.54
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.51
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.49
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.49
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.46
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.42
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.39
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.39
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.38
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.37
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.35
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.34
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.25
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.24
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.22
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.17
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.13
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.05
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.99
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.99
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.96
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	95.94
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	95.89
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	95.87
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	95.87
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.78
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.78
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.76
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.72
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.69
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.58
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.51
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.45
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.45
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	95.45
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.42
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	95.41
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.38
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	95.28
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	95.23
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.19
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.16
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.13
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	95.12
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	94.95
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	94.94
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	94.82
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	94.76
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.75
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	94.73
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.71
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	94.68
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	94.53
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	94.47
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	94.45
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	94.39
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.21
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	94.16
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.15
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	94.05
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.03
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	93.99
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.85
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.74
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	93.72
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	93.7
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.66
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	93.63
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	93.58
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.53
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	93.47
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	93.38
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.37
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.33
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	93.3
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	93.29
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.27
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.21
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.19
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	93.12
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	93.03
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.96
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	92.86
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	92.86
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	92.86
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	92.73
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	92.53
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	92.53
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	92.41
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.37
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	92.36
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	92.23
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.15
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	92.15
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	92.15
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.12
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	92.01
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	91.88
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	91.85
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	91.85
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	91.8
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	91.73
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.5
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.33
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	91.3
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.29
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	91.26
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	91.08
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	90.94
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	90.91
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	90.87
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	90.85
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	90.82
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	90.81
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	90.49
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.32
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	90.05
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	90.04
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.8
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	89.68
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	89.6
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	89.26
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	89.09
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	89.02
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	88.93
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	88.74
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.67
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	88.46
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	87.99
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	87.97
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	87.69
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	87.61
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	87.58
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	87.23
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	86.99
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	86.71
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	86.49
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	86.29
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	85.88
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	85.47
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	85.44
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	85.1
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	84.51
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	83.42
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	82.83
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	82.65
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	82.54
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	82.4
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	81.86
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	81.71
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	81.3
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	80.96

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.81  E-value=1.2e-05  Score=72.08  Aligned_cols=89  Identities=18%  Similarity=0.194  Sum_probs=66.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEEcC---
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD---  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~---  423 (529)
                      ..++|+++|+ |  .+|+.+|+.|..+|. ++++  |+.++-++|+++.+...    +...++.+  .++|++|...   
T Consensus        23 ~~~~ilviGa-G--~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~----~~~~~~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          23 HDKTVLVVGA-G--EMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA----VRFDELVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             TTCEEEEESC-C--HHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE----CCGGGHHHHHHTCSEEEECCSSS
T ss_pred             ccCeEEEECC-C--HHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc----ccchhHHHHhccCCEEEEecCCC
Confidence            6889999999 7  999999999999998 5777  88899999998865432    12334443  5778877332   


Q ss_pred             --cCChhhhhcC------CCCceeecccccCcc
Q 009674          424 --DLTGKEQARA------PKGTIFIPYTQIPPR  448 (529)
Q Consensus       424 --~~~~~~q~~a------~~G~~f~~~~~~~~~  448 (529)
                        .++.++.+.+      .++.+|+|.+ +|+.
T Consensus        96 ~~ii~~~~i~~~~~~r~~~~~~~iiDla-vPr~  127 (159)
T d1gpja2          96 HPVIHVDDVREALRKRDRRSPILIIDIA-NPRD  127 (159)
T ss_dssp             SCCBCHHHHHHHHHHCSSCCCEEEEECC-SSCS
T ss_pred             CccccHhhhHHHHHhcccCCCeEEEeec-CCCC
Confidence              4777776433      3567999998 7775

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.79  E-value=1.7e-05  Score=72.24  Aligned_cols=94  Identities=14%  Similarity=0.080  Sum_probs=68.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee--eecccc---c--CcceEEE--
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV--LSTSYA---A--HKTKIWL--  420 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~--~~~~~~---~--~~~~vwi--  420 (529)
                      ..+.|+++|++|  -||+++|+.|.++|-+|.+  |++++.+++.+++.........  .+++.+   +  .+++++|  
T Consensus        22 ~gK~vlItGasg--GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~   99 (191)
T d1luaa1          22 KGKKAVVLAGTG--PVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA   99 (191)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEEECCCH--HHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence            578999999998  9999999999999999999  9999999999887665543322  333332   2  6778887  


Q ss_pred             Ec---CcCChhhhhcCCCCceeecccccCc
Q 009674          421 VG---DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       421 vg---~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                      +|   ..+++|+.+.+..--++.++.-+++
T Consensus       100 Ag~g~~~~~~e~~~~~~~~nv~~~~~~~~~  129 (191)
T d1luaa1         100 GAIGLELLPQAAWQNESSIEIVADYNAQPP  129 (191)
T ss_dssp             CCTTCCCBCHHHHHTCTTCCEEEECCCSSS
T ss_pred             CccccccCCHHHHHhhhcceeehhHhhHHH
Confidence            23   3456777766666655666654444

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.11  E-value=0.00034  Score=63.45  Aligned_cols=92  Identities=11%  Similarity=0.116  Sum_probs=72.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------  420 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------  420 (529)
                      -++|++.|+-   -.|..-++...+.|-+|..  .+.++++++++..+........+-..+++  +++|++|        
T Consensus        32 pa~V~ViGaG---vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~  108 (168)
T d1pjca1          32 PGKVVILGGG---VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred             CcEEEEECCC---hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCc
Confidence            5799999998   8999999999999999999  88899999988754433111011114443  7888887        


Q ss_pred             -EcCcCChhhhhcCCCCceeecccccCcc
Q 009674          421 -VGDDLTGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       421 -vg~~~~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                       .-+.|+.+..++|+||++.+|++ ++.-
T Consensus       109 ~aP~lIt~~mv~~Mk~GSVIVDva-idqG  136 (168)
T d1pjca1         109 RAPILVPASLVEQMRTGSVIVDVA-VDQG  136 (168)
T ss_dssp             SCCCCBCHHHHTTSCTTCEEEETT-CTTC
T ss_pred             ccCeeecHHHHhhcCCCcEEEEee-cCCC
Confidence             56789999999999999999999 6664

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.91  E-value=0.00032  Score=60.38  Aligned_cols=46  Identities=17%  Similarity=0.176  Sum_probs=40.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  402 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~  402 (529)
                      +|.++|.+|  .+|+++|+.|.+.|.+|++  |++|+++++++++.....
T Consensus         2 ki~vigGaG--~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~   49 (212)
T d1jaya_           2 RVALLGGTG--NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG   49 (212)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred             EEEEEeCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence            588998888  8999999999999999999  999999999998765443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.87  E-value=0.00062  Score=64.92  Aligned_cols=46  Identities=17%  Similarity=0.257  Sum_probs=41.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 ~gK~alVTGas~--GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~   51 (272)
T d1xkqa_           4 SNKTVIITGSSN--GIGRTTAILFAQEGANVTITGRSSERLEETRQIILK   51 (272)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCcCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            356789999997  9999999999999999999  999999999988644

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.86  E-value=0.00057  Score=64.90  Aligned_cols=46  Identities=15%  Similarity=0.198  Sum_probs=41.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      .+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++...
T Consensus         6 gK~alITGas~--GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~   53 (258)
T d1ae1a_           6 GTTALVTGGSK--GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK   53 (258)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            46899999997  9999999999999999999  9999999988886443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.85  E-value=0.00057  Score=59.09  Aligned_cols=46  Identities=26%  Similarity=0.301  Sum_probs=41.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~  401 (529)
                      +++|+++|| |  .+|+.+|+.|+++|.+|++  |++++.++++++.+...
T Consensus         2 ~K~IliiGa-G--~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~   49 (182)
T d1e5qa1           2 TKSVLMLGS-G--FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHST   49 (182)
T ss_dssp             CCEEEEECC-S--TTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccc
Confidence            578999998 7  9999999999999999999  99999999999866533

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.80  E-value=0.00074  Score=63.73  Aligned_cols=46  Identities=13%  Similarity=0.128  Sum_probs=40.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.+.++++|+++  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         9 enKvalITGas~--GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~   56 (251)
T d2c07a1           9 ENKVALVTGAGR--GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS   56 (251)
T ss_dssp             SSCEEEEESTTS--HHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh
Confidence            356788899997  9999999999999999999  999999999988644

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.80  E-value=0.0009  Score=63.16  Aligned_cols=47  Identities=15%  Similarity=0.205  Sum_probs=42.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~  401 (529)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.++++.+.
T Consensus         6 gK~alITGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~   54 (244)
T d1nffa_           6 GKVALVSGGAR--GMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA   54 (244)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcc
Confidence            46789999997  9999999999999999999  99999999999986543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.74  E-value=0.0011  Score=62.96  Aligned_cols=47  Identities=13%  Similarity=0.177  Sum_probs=42.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~  401 (529)
                      -+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++.++++.+.
T Consensus         5 gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~   53 (254)
T d1hdca_           5 GKTVIITGGAR--GLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAA   53 (254)
T ss_dssp             CSEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGE
T ss_pred             CCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCce
Confidence            46789999997  9999999999999999999  99999999999986543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.0007  Score=61.08  Aligned_cols=37  Identities=11%  Similarity=0.125  Sum_probs=32.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      -++|+|+||||  .||+++++.|.++|.+|+.  |+.+++.
T Consensus         3 ~kkIlV~GatG--~iG~~v~~~Ll~~g~~V~~~~R~~~~~~   41 (205)
T d1hdoa_           3 VKKIAIFGATG--QTGLTTLAQAVQAGYEVTVLVRDSSRLP   41 (205)
T ss_dssp             CCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCGGGSC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCcCEEEEEEcChhhcc
Confidence            46799999999  9999999999999999988  7777654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0009  Score=63.35  Aligned_cols=47  Identities=26%  Similarity=0.299  Sum_probs=42.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      +.+.|+++|+++  -||+++|+.|+++|.+|.+  |++++++++++++...
T Consensus         9 k~Kv~lITGas~--GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~   57 (257)
T d1xg5a_           9 RDRLALVTGASG--GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA   57 (257)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            357899999997  9999999999999999999  9999999998886654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.65  E-value=0.00095  Score=63.71  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=40.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 gK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~   50 (274)
T d1xhla_           4 GKSVIITGSSN--GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILK   50 (274)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            46789999997  9999999999999999999  999999999988644

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.65  E-value=0.0011  Score=63.30  Aligned_cols=45  Identities=20%  Similarity=0.254  Sum_probs=40.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      -+.|+++|+++  -||+|+|+.|+++|.+|.+  |++|++++++++.+.
T Consensus         5 gK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~   51 (276)
T d1bdba_           5 GEAVLITGGAS--GLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGD   51 (276)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC
Confidence            47899999997  9999999999999999999  999999999888654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.64  E-value=0.00098  Score=63.17  Aligned_cols=46  Identities=13%  Similarity=0.200  Sum_probs=41.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++...
T Consensus         8 GK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~   55 (259)
T d2ae2a_           8 GCTALVTGGSR--GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK   55 (259)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            46789999997  9999999999999999999  9999999998886543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.0011  Score=62.38  Aligned_cols=46  Identities=17%  Similarity=0.255  Sum_probs=41.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.+
T Consensus         4 gK~alITGas~--GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~   51 (243)
T d1q7ba_           4 GKIALVTGASR--GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN   51 (243)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Confidence            45789999997  9999999999999999999  9999999999887543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.62  E-value=0.00094  Score=63.07  Aligned_cols=48  Identities=13%  Similarity=0.158  Sum_probs=41.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  402 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~  402 (529)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  |++++++++.+++.++.+
T Consensus         5 gK~~lITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g   54 (251)
T d1vl8a_           5 GRVALVTGGSR--GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG   54 (251)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC
Confidence            46789999997  9999999999999999999  999999988887655443

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.61  E-value=0.00094  Score=63.24  Aligned_cols=46  Identities=15%  Similarity=0.228  Sum_probs=41.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus        10 ~gK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~   57 (255)
T d1fmca_          10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ   57 (255)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            346889999997  9999999999999999999  999999999888654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.61  E-value=0.0011  Score=62.72  Aligned_cols=46  Identities=17%  Similarity=0.265  Sum_probs=41.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      ..+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 ~gKvalVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~   51 (264)
T d1spxa_           4 AEKVAIITGSSN--GIGRATAVLFAREGAKVTITGRHAERLEETRQQILA   51 (264)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            356789999997  9999999999999999999  999999999888643

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.61  E-value=0.0011  Score=62.53  Aligned_cols=43  Identities=21%  Similarity=0.227  Sum_probs=38.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      -++++|+++  =||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         3 ValITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~   47 (255)
T d1gega_           3 VALVTGAGQ--GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ   47 (255)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             EEEEcCCcc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            358889997  8999999999999999999  999999999988754

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.59  E-value=0.00098  Score=63.04  Aligned_cols=47  Identities=23%  Similarity=0.203  Sum_probs=41.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~  401 (529)
                      .+.|+++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.+.
T Consensus         6 gK~alITGas~--GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~   54 (253)
T d1hxha_           6 GKVALVTGGAS--GVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS   54 (253)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCe
Confidence            46789999997  9999999999999999999  99999999999876543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.59  E-value=0.0013  Score=62.22  Aligned_cols=46  Identities=20%  Similarity=0.245  Sum_probs=41.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |++|+++++.++++.+
T Consensus         5 gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~   52 (256)
T d1k2wa_           5 GKTALITGSAR--GIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA   52 (256)
T ss_dssp             TEEEEEETCSS--HHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCc
Confidence            46789999997  9999999999999999999  9999999999987544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00086  Score=63.60  Aligned_cols=47  Identities=19%  Similarity=0.268  Sum_probs=41.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~  401 (529)
                      -+.++++||++  -||+|+|+.|+++|.+|.+  |++|+++++++++....
T Consensus        14 GK~alITGass--GIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~   62 (269)
T d1xu9a_          14 GKKVIVTGASK--GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG   62 (269)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh
Confidence            46799999997  9999999999999999999  99999999988855443

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.56  E-value=0.0036  Score=55.40  Aligned_cols=66  Identities=15%  Similarity=0.162  Sum_probs=49.4

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc---CcceEEE
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL  420 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwi  420 (529)
                      +....++|++.||-|   .|+|++.+|.+.|.++.+  |+.++.++|.+.......   +...++.+   .+++++|
T Consensus        14 ~~~~~k~vlIlGaGG---aarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~---~~~~~~~~~~~~~~dliI   84 (170)
T d1nyta1          14 FIRPGLRILLIGAGG---ASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGS---IQALSMDELEGHEFDLII   84 (170)
T ss_dssp             CCCTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSS---EEECCSGGGTTCCCSEEE
T ss_pred             CCCCCCEEEEECCcH---HHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccc---ccccccccccccccceee
Confidence            444567899999976   599999999999999888  999999999988665432   22333332   5667877

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.56  E-value=0.0011  Score=62.93  Aligned_cols=47  Identities=13%  Similarity=0.213  Sum_probs=41.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      +.+.|+|+|+++  -||+|+|+.|++.|.+|.+  |++++++++.+++...
T Consensus         7 kgK~alVTGas~--GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~   55 (259)
T d1xq1a_           7 KAKTVLVTGGTK--GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK   55 (259)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            357899999997  9999999999999999999  9999999998886543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0012  Score=62.16  Aligned_cols=44  Identities=18%  Similarity=0.206  Sum_probs=40.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +.++++|+++  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         8 kv~lITGas~--GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~   53 (244)
T d1yb1a_           8 EIVLITGAGH--GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG   53 (244)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            5788889997  9999999999999999999  999999999998654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.0012  Score=62.11  Aligned_cols=46  Identities=20%  Similarity=0.300  Sum_probs=41.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .-+.|+++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.
T Consensus         6 ~GK~~lITGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~   53 (244)
T d1pr9a_           6 AGRRVLVTGAGK--GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG   53 (244)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC
Confidence            346899999997  9999999999999999999  999999999998754

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.51  E-value=0.0011  Score=63.25  Aligned_cols=47  Identities=13%  Similarity=0.162  Sum_probs=41.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~  401 (529)
                      -+.++++|+++  -||+|+|+.|++.|.+|.+  |++++++++.+++..+.
T Consensus        25 gK~alITGas~--GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~   73 (294)
T d1w6ua_          25 GKVAFITGGGT--GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT   73 (294)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc
Confidence            47899999997  9999999999999999999  99999998888765544

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.49  E-value=0.0015  Score=61.87  Aligned_cols=46  Identities=20%  Similarity=0.254  Sum_probs=41.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +-+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 ~gK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~   51 (260)
T d1zema1           4 NGKVCLVTGAGG--NIGLATALRLAEEGTAIALLDMNREALEKAEASVRE   51 (260)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            356789999997  9999999999999999998  999999999988654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.49  E-value=0.0011  Score=62.68  Aligned_cols=48  Identities=15%  Similarity=0.199  Sum_probs=41.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  402 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~  402 (529)
                      .+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++..+.+
T Consensus         9 gK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g   58 (260)
T d1h5qa_           9 NKTIIVTGGNR--GIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG   58 (260)
T ss_dssp             TEEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC
Confidence            47889999997  9999999999999999999  899999888877655443

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.46  E-value=0.0021  Score=60.14  Aligned_cols=45  Identities=9%  Similarity=0.143  Sum_probs=41.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      -+.|+++|+++  -||+++|+.|+++|.+|.+  |++++++++.++++.
T Consensus         5 gK~alItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   51 (241)
T d2a4ka1           5 GKTILVTGAAS--GIGRAALDLFAREGASLVAVDREERLLAEAVAALEA   51 (241)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCS
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC
Confidence            46789999997  9999999999999999999  999999999888764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.42  E-value=0.0039  Score=57.55  Aligned_cols=144  Identities=15%  Similarity=0.181  Sum_probs=83.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc---CcceEEE---EcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL---VGD  423 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwi---vg~  423 (529)
                      +-++|.+.| .|  +||+.+|++|.+.|.+|+.  .++++.+..... ..+       .-+.++   .+|||.+   .|.
T Consensus        26 ~gk~v~IqG-~G--~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~-g~~-------~~~~~~~~~~~~DI~iPcA~~~   94 (201)
T d1c1da1          26 DGLTVLVQG-LG--AVGGSLASLAAEAGAQLLVADTDTERVAHAVAL-GHT-------AVALEDVLSTPCDVFAPCAMGG   94 (201)
T ss_dssp             TTCEEEEEC-CS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCE-------ECCGGGGGGCCCSEEEECSCSC
T ss_pred             CCCEEEEEC-CC--HHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh-ccc-------ccCccccccccceeeecccccc
Confidence            457899999 55  9999999999999999999  555666554332 111       112222   5788887   777


Q ss_pred             cCChhhhhcCCCCceeecccccCccCCCCCceeecCCccccCCCCccccccccccCcchhHHHHHhhHhh----hhcCCC
Q 009674          424 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWD  499 (529)
Q Consensus       424 ~~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~p~r~~~Ac~a~~~v~----alEgw~  499 (529)
                      .|+++...+.+-- .++--+.-|...-..|=...+.+.+-+|+                 +.+-|+|++.    .+.+|+
T Consensus        95 ~I~~~~a~~i~ak-~i~e~AN~p~~~~~~~~~L~~rgI~~iPD-----------------~laNAGGVi~~~~~~~~~~~  156 (201)
T d1c1da1          95 VITTEVARTLDCS-VVAGAANNVIADEAASDILHARGILYAPD-----------------FVANAGGAIHLVGREVLGWS  156 (201)
T ss_dssp             CBCHHHHHHCCCS-EECCSCTTCBCSHHHHHHHHHTTCEECCH-----------------HHHTTHHHHHHHHHHTTCCC
T ss_pred             cccHHHHhhhhhh-eeeccCCCCcchhhHHHHhcccceEEEeh-----------------hhhccchHHHHHHHHHcCCC
Confidence            7888777655321 11111111100000000111222233443                 2344556553    346888


Q ss_pred             CCccch-h---hhhHHHHHHHHHhcCCcc
Q 009674          500 LNECGQ-T---MCDIHQVWHASLRHGFRP  524 (529)
Q Consensus       500 ~~e~G~-i---v~~id~i~~aa~kHGF~p  524 (529)
                      +.+.-+ +   .+.+.+|++.|.++|=.|
T Consensus       157 ~~~v~~~l~~i~~~~~~i~~~a~~~~~~~  185 (201)
T d1c1da1         157 ESVVHERAVAIGDTLNQVFEISDNDGVTP  185 (201)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCcCH
Confidence            887554 3   489999999999998433

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.39  E-value=0.0012  Score=61.71  Aligned_cols=45  Identities=11%  Similarity=0.082  Sum_probs=38.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhCccc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      +.|+++||++  -||+++|+.|+++|  ++|.+  |+++++++++++.+.+
T Consensus         4 KtilITGass--GIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~   52 (250)
T d1yo6a1           4 GSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR   52 (250)
T ss_dssp             SEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTT
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCc
Confidence            7899999996  99999999999998  57776  9999999998775443

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.39  E-value=0.0023  Score=59.99  Aligned_cols=46  Identities=13%  Similarity=0.227  Sum_probs=41.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+  |++++++++++++...
T Consensus         5 gK~~lITGas~--GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~   52 (242)
T d1ulsa_           5 DKAVLITGAAH--GIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH   52 (242)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCe
Confidence            46789999997  8999999999999999999  9999999998887543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.38  E-value=0.0018  Score=61.03  Aligned_cols=47  Identities=19%  Similarity=0.187  Sum_probs=41.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      +.+.++|+|+++  -||+|+|+.|+++|.+|.+  |++|+++++++++..+
T Consensus         5 ~gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~   53 (251)
T d1zk4a1           5 DGKVAIITGGTL--GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP   53 (251)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC
Confidence            347889999997  9999999999999999999  9999999999886543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0018  Score=62.63  Aligned_cols=46  Identities=13%  Similarity=0.204  Sum_probs=40.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +-+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++..
T Consensus        11 ~gKvalITGas~--GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~   58 (297)
T d1yxma1          11 QGQVAIVTGGAT--GIGKAIVKELLELGSNVVIASRKLERLKSAADELQA   58 (297)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            457889999997  9999999999999999999  999999888777543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.35  E-value=0.0021  Score=60.48  Aligned_cols=44  Identities=14%  Similarity=0.204  Sum_probs=39.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +-++++|+++  =||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         3 KValITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~   48 (257)
T d2rhca1           3 EVALVTGATS--GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE   48 (257)
T ss_dssp             CEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            4457889997  8999999999999999999  999999999988754

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.0022  Score=60.25  Aligned_cols=45  Identities=22%  Similarity=0.176  Sum_probs=40.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      -+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         3 GKvalITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~   49 (254)
T d2gdza1           3 GKVALVTGAAQ--GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE   49 (254)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            36789999997  9999999999999999999  999999998888654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.0021  Score=60.65  Aligned_cols=46  Identities=13%  Similarity=0.212  Sum_probs=41.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.
T Consensus         5 ~GK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~   52 (250)
T d1ydea1           5 AGKVVVVTGGGR--GIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG   52 (250)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCC
Confidence            346799999997  9999999999999999999  999999999998764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.24  E-value=0.0022  Score=60.14  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=40.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.
T Consensus         5 GK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~   51 (242)
T d1cyda_           5 GLRALVTGAGK--GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG   51 (242)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTT
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCC
Confidence            36789999997  8999999999999999999  999999999998754

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.22  E-value=0.0019  Score=60.48  Aligned_cols=44  Identities=20%  Similarity=0.325  Sum_probs=37.4

Q ss_pred             cE-EEEecccCchhhHHHHHHHHhccCcE-------EEe--cchhhHHHHHhhCcc
Q 009674          354 AH-VLLRGTVTANKVANAVASSLCQMGIK-------VAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       354 ~~-V~~~Gatg~~kig~ava~~L~~~~~~-------v~l--~~~~~~~~l~~~~~~  399 (529)
                      |+ |+++|+++  -||+|+|+.|+++|.+       |.+  |++++++++++++..
T Consensus         1 K~VvlITGas~--GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~   54 (240)
T d2bd0a1           1 KHILLITGAGK--GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA   54 (240)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCEEEEccCCC--HHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh
Confidence            46 46789996  8999999999999987       666  999999999988654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.17  E-value=0.002  Score=60.73  Aligned_cols=48  Identities=13%  Similarity=0.291  Sum_probs=40.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCccccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPVEAQ  402 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~~~~~~~  402 (529)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |+ +++++++++++..+.+
T Consensus         4 gK~alITGas~--GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g   54 (260)
T d1x1ta1           4 GKVAVVTGSTS--GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG   54 (260)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             cCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcC
Confidence            35788999997  9999999999999999999  54 6788888888665543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.13  E-value=0.0029  Score=59.82  Aligned_cols=45  Identities=22%  Similarity=0.273  Sum_probs=40.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      .+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 gK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~   50 (258)
T d1iy8a_           4 DRVVLITGGGS--GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE   50 (258)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46789999997  9999999999999999999  999999988887544

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.05  E-value=0.0033  Score=59.46  Aligned_cols=47  Identities=19%  Similarity=0.253  Sum_probs=41.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      +.+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++...
T Consensus         5 ~gKvalITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~   53 (268)
T d2bgka1           5 QDKVAIITGGAG--GIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP   53 (268)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC
Confidence            356789999997  9999999999999999999  9999999999987553

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.99  E-value=0.0048  Score=53.70  Aligned_cols=81  Identities=16%  Similarity=0.129  Sum_probs=52.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CcceEEEEc-------Cc
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVG-------DD  424 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg-------~~  424 (529)
                      +|.++|+ |  .+|+++|+.|++.|.+|..  |+++..++.+++-....     ..+++++ +++|++|+-       +.
T Consensus         2 kI~iIG~-G--~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~DiIilavp~~~~~~v   73 (165)
T d2f1ka2           2 KIGVVGL-G--LIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDE-----AGQDLSLLQTAKIIFLCTPIQLILPT   73 (165)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSE-----EESCGGGGTTCSEEEECSCHHHHHHH
T ss_pred             EEEEEee-c--HHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccce-----eeeecccccccccccccCcHhhhhhh
Confidence            5788988 5  9999999999999999999  88888887766521111     1224555 788776631       11


Q ss_pred             CChhhhhcCCCCceeecccc
Q 009674          425 LTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       425 ~~~~~q~~a~~G~~f~~~~~  444 (529)
                      +. +-....++++++++.+-
T Consensus        74 l~-~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          74 LE-KLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HH-HHGGGSCTTCEEEECCS
T ss_pred             hh-hhhhhcccccceeeccc
Confidence            21 11223467777776653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.99  E-value=0.0031  Score=58.57  Aligned_cols=48  Identities=17%  Similarity=0.327  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH-HHHHhhCccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY-EKLKLRIPVE  400 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~-~~l~~~~~~~  400 (529)
                      -+.|+++||.|++-||+|||+.|+++|.+|.+  |++++. ++++++++.+
T Consensus         6 gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~   56 (268)
T d2h7ma1           6 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAK   56 (268)
T ss_dssp             TCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSC
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCc
Confidence            46799999886234999999999999999999  777776 5576666543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0026  Score=59.00  Aligned_cols=47  Identities=13%  Similarity=0.118  Sum_probs=41.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~  401 (529)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++....
T Consensus         5 GKvalITGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~   53 (248)
T d2o23a1           5 GLVAVITGGAS--GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNC   53 (248)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc
Confidence            35678999997  8999999999999999999  99999999998876544

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.94  E-value=0.0035  Score=59.26  Aligned_cols=45  Identities=20%  Similarity=0.208  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~  399 (529)
                      -+.|+++|+++  -||+|+|+.|+++|.+|.+   ++++..+++.+++..
T Consensus        18 gK~~lITGas~--GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~   65 (272)
T d1g0oa_          18 GKVALVTGAGR--GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK   65 (272)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh
Confidence            47899999997  9999999999999999988   456777877776544

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0023  Score=60.01  Aligned_cols=45  Identities=18%  Similarity=0.270  Sum_probs=39.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~  399 (529)
                      -+.|+++|+++  -||+|||+.|+++|.+|.+  |+++++++++++.+.
T Consensus         6 gK~alITGas~--GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~   52 (245)
T d2ag5a1           6 GKVIILTAAAQ--GIGQAAALAFAREGAKVIATDINESKLQELEKYPGI   52 (245)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCC
Confidence            46789999997  9999999999999999999  999999888776543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.87  E-value=0.0043  Score=58.21  Aligned_cols=48  Identities=17%  Similarity=0.198  Sum_probs=40.2

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  399 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~  399 (529)
                      |-.-+.|+++|+++  -||+|+|+.|+++|.+|.+   ++++..+++++++..
T Consensus         3 ~L~GK~alITGas~--GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~   53 (259)
T d1ja9a_           3 PLAGKVALTTGAGR--GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK   53 (259)
T ss_dssp             TTTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHH
Confidence            34457889999997  9999999999999999987   677778888888644

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=95.87  E-value=0.0043  Score=58.01  Aligned_cols=49  Identities=14%  Similarity=0.277  Sum_probs=40.2

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcccccccee
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLV  406 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~~~l~  406 (529)
                      ++++|+++  -||+|+|+.|+++|.+|.+   |++++.+++++++........+
T Consensus         5 AlITGas~--GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~   56 (284)
T d1e7wa_           5 ALVTGAAK--RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAI   56 (284)
T ss_dssp             EEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE
T ss_pred             EEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceE
Confidence            35679997  8999999999999999987   7788899999887765554433

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.78  E-value=0.0038  Score=58.46  Aligned_cols=42  Identities=26%  Similarity=0.341  Sum_probs=36.8

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcc
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  399 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~  399 (529)
                      |+++|+++  -||+++|+.|+++|.+|.+   |++++.+++++++..
T Consensus         4 ~lITGas~--GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~   48 (244)
T d1edoa_           4 VVVTGASR--GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA   48 (244)
T ss_dssp             EEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             EEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH
Confidence            67889997  9999999999999999987   788889998888643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.78  E-value=0.0051  Score=57.55  Aligned_cols=46  Identities=20%  Similarity=0.231  Sum_probs=39.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc---cCcEEEe--cchhhHHHHHhhCccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQ---MGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~---~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      .+-++++|+++  =||+++|+.|+|   +|.+|.+  |++++++++++++..+
T Consensus         6 gKvalITGas~--GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~   56 (259)
T d1oaaa_           6 CAVCVLTGASR--GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ   56 (259)
T ss_dssp             SEEEEESSCSS--HHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhh
Confidence            34567789996  899999999996   8999999  9999999999886543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.76  E-value=0.0049  Score=58.09  Aligned_cols=139  Identities=19%  Similarity=0.186  Sum_probs=87.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc--cCcceEEE---EcCc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--AHKTKIWL---VGDD  424 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~~~~~vwi---vg~~  424 (529)
                      +.++|++-|--   +||+.+|+.|.+.|-+++.  .++++.+.+..+...+.      +..-+  +.+|||.+   .|..
T Consensus        38 ~g~~v~IqG~G---nVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~------~~~~~~~~~~cDIl~PcA~~~~  108 (230)
T d1leha1          38 EGLAVSVQGLG---NVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA------VAPNAIYGVTCDIFAPCALGAV  108 (230)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE------CCGGGTTTCCCSEEEECSCSCC
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc------cCCcccccccccEecccccccc
Confidence            46789999987   9999999999999999999  67777777776643322      11111  25888877   5556


Q ss_pred             CChhhhhcCCCCceeecccccCccCCCCCceeecCCc-ccc--CCCCccccccccccCcchhHH----HHHhhHhh-hhc
Q 009674          425 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPA-MII--PPSLSNMHSCENWLGRRVMSA----WRIAGIIH-ALE  496 (529)
Q Consensus       425 ~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a-~~~--P~~~~~~~~~e~~~p~r~~~A----c~a~~~v~-alE  496 (529)
                      |+++...+..                   |.+.-.+| -.+  |+.-+      .-..|+++++    +-|+|++- ++|
T Consensus       109 I~~~~~~~l~-------------------ak~Ive~ANn~~t~~ea~~------~L~~rGI~~iPD~laNAGGVi~s~~E  163 (230)
T d1leha1         109 LNDFTIPQLK-------------------AKVIAGSADNQLKDPRHGK------YLHELGIVYAPDYVINAGGVINVADE  163 (230)
T ss_dssp             BSTTHHHHCC-------------------CSEECCSCSCCBSSHHHHH------HHHHHTCEECCHHHHTTHHHHHHHHG
T ss_pred             cChHHhhccC-------------------ccEEEecccCCCCCchHHH------HHHhhCcEEEeehhhcccchhhhhhh
Confidence            6655543332                   54544444 111  11111      1113333333    55666654 444


Q ss_pred             --CCCCCccc-hh---hhhHHHHHHHHHhcCCcc
Q 009674          497 --GWDLNECG-QT---MCDIHQVWHASLRHGFRP  524 (529)
Q Consensus       497 --gw~~~e~G-~i---v~~id~i~~aa~kHGF~p  524 (529)
                        +|++++.= ++   .+.+++|++.|.++|-.|
T Consensus       164 ~~~~~~~~~~~~l~~I~~~~~~vl~~a~~~~~~~  197 (230)
T d1leha1         164 LYGYNRTRAMKRVDGIYDSIEKIFAISKRDGVPS  197 (230)
T ss_dssp             GGCCCHHHHHHHHTHHHHHHHHHHHHHHHTTCCH
T ss_pred             hhCCCHHHHHHHHHHHHHHHHHHHHHHHHHCcCH
Confidence              77766543 33   599999999999999654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.72  E-value=0.0052  Score=59.08  Aligned_cols=37  Identities=8%  Similarity=0.151  Sum_probs=32.3

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  389 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~  389 (529)
                      |.+++|+|+||||  -||+++|+.|.++|.+|..  |+.+.
T Consensus         1 ~~kktIlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           1 QQKKTIAVVGATG--RQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCCEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCCEEEEECCCh--HHHHHHHHHHHhCCCeEEEEECCcch
Confidence            3578999999999  9999999999999999877  76554

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.69  E-value=0.0084  Score=57.67  Aligned_cols=43  Identities=28%  Similarity=0.298  Sum_probs=37.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      .-+.|+|+|++|  =||+.++..|.++|.+|..  |+.++.+.+++.
T Consensus        10 ~gk~VlVTG~sG--fIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~   54 (342)
T d1y1pa1          10 EGSLVLVTGANG--FVASHVVEQLLEHGYKVRGTARSASKLANLQKR   54 (342)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred             CcCEEEEECCCC--HHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHh
Confidence            357999999999  9999999999999999865  888888877654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.58  E-value=0.0032  Score=55.36  Aligned_cols=40  Identities=20%  Similarity=0.167  Sum_probs=31.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLK  394 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~--v~l--~~~~~~~~l~  394 (529)
                      -++|+|+|+||  -||+++++.|.++|.+  |..  |++++.+.+.
T Consensus         3 ~~tVlVtGatG--~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~   46 (252)
T d2q46a1           3 LPTVLVTGASG--RTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG   46 (252)
T ss_dssp             CCEEEEESTTS--TTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc
Confidence            46899999999  9999999999999954  432  6776665443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.51  E-value=0.011  Score=51.20  Aligned_cols=41  Identities=20%  Similarity=0.166  Sum_probs=37.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      .+++.++|+-   .+|.++|..|.+.|.+|.+  |++++.+++++.
T Consensus         1 sk~iaIiGaG---~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGLG---NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECcc---HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            4789999995   9999999999999999999  899999999875

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.45  E-value=0.014  Score=49.00  Aligned_cols=40  Identities=28%  Similarity=0.378  Sum_probs=36.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      +|+++|. |  .+|+.+|+.|.++|.+|++  .|+++.++++++.
T Consensus         2 ~IvI~G~-G--~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~   43 (132)
T d1lssa_           2 YIIIAGI-G--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI   43 (132)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC
T ss_pred             EEEEECC-C--HHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh
Confidence            5899998 5  9999999999999999999  8899999887764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.45  E-value=0.0046  Score=57.50  Aligned_cols=41  Identities=15%  Similarity=0.148  Sum_probs=36.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHh---ccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLC---QMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~---~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ++|+++||++  =||+++|+.|+   ++|.+|.+  |++++++++++.
T Consensus         3 KtilITGas~--GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~   48 (248)
T d1snya_           3 NSILITGCNR--GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL   48 (248)
T ss_dssp             SEEEESCCSS--HHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHH
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence            5799999997  89999999985   68999999  999999988754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0054  Score=57.85  Aligned_cols=46  Identities=20%  Similarity=0.255  Sum_probs=38.8

Q ss_pred             cEE-EEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCcccc
Q 009674          354 AHV-LLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       354 ~~V-~~~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~~~~~~~~  401 (529)
                      ++| +|+|+++  =||+++|+.|+++ |-+|.+  |+++++++..+++..+.
T Consensus         3 ~rVAlVTGas~--GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~   52 (275)
T d1wmaa1           3 IHVALVTGGNK--GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG   52 (275)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT
T ss_pred             CeEEEECCCCC--HHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            467 5779996  9999999999976 899999  99999999888875543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.42  E-value=0.0083  Score=52.98  Aligned_cols=62  Identities=21%  Similarity=0.214  Sum_probs=45.7

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeecccccCcceEEE
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL  420 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi  420 (529)
                      +++ .++|++.|+-|   .|+|++.+|++.|+ ++.+  |++++.++|++..+...      +.+++..+++++|
T Consensus        14 ~~~-~~~vlIlGaGG---aarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~------~~~~~~~~~DliI   78 (167)
T d1npya1          14 LNK-NAKVIVHGSGG---MAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY------INSLENQQADILV   78 (167)
T ss_dssp             CCT-TSCEEEECSST---THHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE------ESCCTTCCCSEEE
T ss_pred             CCC-CCeEEEECCCH---HHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh------hhcccccchhhhe
Confidence            443 46899999975   69999999999997 5666  99999999988755433      2223224567777

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=95.41  E-value=0.0071  Score=57.17  Aligned_cols=45  Identities=18%  Similarity=0.212  Sum_probs=37.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCcc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPV  399 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~~~~  399 (529)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  |+ +++.+++++++..
T Consensus         7 gK~alITGas~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~   54 (261)
T d1geea_           7 GKVVVITGSST--GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK   54 (261)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh
Confidence            46789999997  8999999999999999999  65 4577877777543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.017  Score=51.60  Aligned_cols=88  Identities=16%  Similarity=0.205  Sum_probs=68.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec--CcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDL  425 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~  425 (529)
                      .-++|.|+|--   +||+.+|+.|...|-+|++.+.+....|+.....-.      +.++++  ..++++|  -|  +.|
T Consensus        23 ~Gk~v~V~GyG---~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~------v~~~~~a~~~adivvtaTGn~~vI   93 (163)
T d1li4a1          23 AGKVAVVAGYG---DVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE------VTTMDEACQEGNIFVTTTGCIDII   93 (163)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE------ECCHHHHTTTCSEEEECSSCSCSB
T ss_pred             cCCEEEEeccc---cccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE------eeehhhhhhhccEEEecCCCccch
Confidence            56789999865   999999999999999999977778888877733222      344443  5556666  34  579


Q ss_pred             ChhhhhcCCCCceeecccccCcc
Q 009674          426 TGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       426 ~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      +.|+.++|+.|++.+-...|+-+
T Consensus        94 ~~eh~~~MKdgaIL~N~Ghfd~E  116 (163)
T d1li4a1          94 LGRHFEQMKDDAIVCNIGHFDVE  116 (163)
T ss_dssp             CHHHHTTCCTTEEEEECSSSTTS
T ss_pred             hHHHHHhccCCeEEEEeccccce
Confidence            99999999999999998776555

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.28  E-value=0.0091  Score=55.57  Aligned_cols=41  Identities=20%  Similarity=0.234  Sum_probs=31.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  392 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~  392 (529)
                      .-+.++++||+|+.=||+|+|+.|+++|.+|.+  |+++..+.
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~   49 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE   49 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH
Confidence            456799999997223999999999999999988  55443333

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.23  E-value=0.0062  Score=56.39  Aligned_cols=40  Identities=23%  Similarity=0.228  Sum_probs=34.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      .+.|+|+|+++  -||+|+|+.|+++|.+|.+  |++|++++..
T Consensus         4 gK~~lVTGas~--GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~   45 (234)
T d1o5ia_           4 DKGVLVLAASR--GIGRAVADVLSQEGAEVTICARNEELLKRSG   45 (234)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHTC
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHhcC
Confidence            46899999997  9999999999999999999  8887776543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.19  E-value=0.047  Score=49.53  Aligned_cols=105  Identities=12%  Similarity=0.028  Sum_probs=72.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccc------ccee-------eec--------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ------HNLV-------LST--------  409 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~------~~l~-------~~~--------  409 (529)
                      -++|++.|+-   -+|..-++...+.|-+|..  .+.++++++++..+.--.      .++.       ..+        
T Consensus        29 pa~VvViGaG---vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          29 PARVLVFGVG---VAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CcEEEEEcCc---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            5799999998   8999999999999999999  777888888776332110      0000       000        


Q ss_pred             -cccc--CcceEEE---------EcCcCChhhhhcCCCCceeecccccCcc----CCCCCceeecCCc
Q 009674          410 -SYAA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPA  461 (529)
Q Consensus       410 -~~~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y~~~~a  461 (529)
                       .+.+  +++|++|         .=+.++++..++|+||.+.+|++ ++.-    ..|.|=+|.++++
T Consensus       106 ~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDva-idqGGn~Ets~~~~~~~~~gV  172 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA-VEAGGNCPLSEPGKIVVKHGV  172 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT-GGGTCSSTTCCTTCEEEETTE
T ss_pred             HHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEe-ecCCCccccCcCCCEEEECCE
Confidence             1221  5778877         44469999999999999999999 7655    3344444544443

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.0036  Score=57.37  Aligned_cols=35  Identities=17%  Similarity=0.248  Sum_probs=29.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKD  388 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~  388 (529)
                      ..++|+|+||||  -||+.+++.|.++|.  +|..  |++.
T Consensus        13 ~~k~IlItGaTG--~iG~~l~~~Ll~~g~~~~v~~~~R~~~   51 (232)
T d2bkaa1          13 QNKSVFILGASG--ETGRVLLKEILEQGLFSKVTLIGRRKL   51 (232)
T ss_dssp             TCCEEEEECTTS--HHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHhCCCCCEEEEEecChh
Confidence            567899999999  999999999998884  7777  5443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.13  E-value=0.026  Score=50.44  Aligned_cols=88  Identities=14%  Similarity=0.134  Sum_probs=72.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec--CcC
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDL  425 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~  425 (529)
                      .-++|+|+|--   ++|+.||+.|...|-+|++...|....||... .++     ++.++++  +.++++|  -|  +.|
T Consensus        22 aGk~vvV~GYG---~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~m-dGf-----~v~~~~~a~~~aDi~vTaTGn~~vI   92 (163)
T d1v8ba1          22 SGKIVVICGYG---DVGKGCASSMKGLGARVYITEIDPICAIQAVM-EGF-----NVVTLDEIVDKGDFFITCTGNVDVI   92 (163)
T ss_dssp             TTSEEEEECCS---HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-TTC-----EECCHHHHTTTCSEEEECCSSSSSB
T ss_pred             cCCEEEEeccc---ccchhHHHHHHhCCCEEEEEecCchhhHHHHh-cCC-----ccCchhHccccCcEEEEcCCCCccc
Confidence            56799999987   99999999999999999997778888888864 333     2556664  6778877  23  469


Q ss_pred             ChhhhhcCCCCceeecccccCcc
Q 009674          426 TGKEQARAPKGTIFIPYTQIPPR  448 (529)
Q Consensus       426 ~~~~q~~a~~G~~f~~~~~~~~~  448 (529)
                      +.++.++|+.|++.|-.-.|+-+
T Consensus        93 ~~~h~~~MKdgaIl~N~GHfd~E  115 (163)
T d1v8ba1          93 KLEHLLKMKNNAVVGNIGHFDDE  115 (163)
T ss_dssp             CHHHHTTCCTTCEEEECSSTTTS
T ss_pred             cHHHHHHhhCCeEEEeccccchh
Confidence            99999999999999999887655

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=95.12  E-value=0.036  Score=54.80  Aligned_cols=139  Identities=12%  Similarity=0.050  Sum_probs=90.2

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  369 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~  369 (529)
                      .|+|+++-=-=|....|-.-.+..+.-+++ +.-+-+.||+.+|+       |++.+-+ +++.+++.++|+-   ..|+
T Consensus        65 ~g~K~v~~~p~N~~~Glp~i~g~~~L~d~~TG~p~al~d~~~LTa~RTaA~salaa~~LA~~da~~l~iiG~G---~QA~  141 (340)
T d1x7da_          65 YAFKYVNGHPANTARNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGNG---AQSE  141 (340)
T ss_dssp             EEEEEEEECGGGGGGTCCSEEEEEEEEETTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---TTHH
T ss_pred             EEEEEEEECCCccccCCCcceEEEEEEECCCCCEEEEEcchhhhhhHHHHHHHHHHHHhhccCCceEEEEccc---HHHH
Confidence            577776643333323232222333333333 34588999999974       3444554 6788999999987   7899


Q ss_pred             HHHHHHh-ccCcE-EEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE---cC----cCChhhhhcCCCC
Q 009674          370 AVASSLC-QMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV---GD----DLTGKEQARAPKG  436 (529)
Q Consensus       370 ava~~L~-~~~~~-v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv---g~----~~~~~~q~~a~~G  436 (529)
                      .-+++++ -++++ |.+  |++++-+++.+++....+..+..+.++++  ++++|++.   .+    .++++.   .+||
T Consensus       142 ~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s~~Pv~~~~~---l~pG  218 (340)
T d1x7da_         142 FQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITPDM---LEPG  218 (340)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSEEEEECGGG---CCTT
T ss_pred             HHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCCCCcccchhh---cCCC
Confidence            9999888 44444 444  89999999998876555555334447774  77877662   11    455554   4999


Q ss_pred             ceeeccc
Q 009674          437 TIFIPYT  443 (529)
Q Consensus       437 ~~f~~~~  443 (529)
                      +++..+.
T Consensus       219 ~hI~aiG  225 (340)
T d1x7da_         219 MHLNAVG  225 (340)
T ss_dssp             CEEEECS
T ss_pred             CEEeecc
Confidence            9998875

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.00  E-value=0.0061  Score=59.27  Aligned_cols=29  Identities=21%  Similarity=0.238  Sum_probs=27.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +.|+|+||||  -||+.+|+.|.++|.+|..
T Consensus         2 K~vLITGatG--fiGs~lv~~Ll~~g~~V~~   30 (357)
T d1db3a_           2 KVALITGVTG--QDGSYLAEFLLEKGYEVHG   30 (357)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCcCEEEE
Confidence            5788999999  9999999999999999987

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=94.95  E-value=0.012  Score=54.94  Aligned_cols=36  Identities=19%  Similarity=0.269  Sum_probs=30.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      -+.++++|++|.+-||+|+|+.|+++|.+|.+  |+++
T Consensus         5 gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~   42 (274)
T d2pd4a1           5 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES   42 (274)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46789999987334999999999999999999  6653

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.94  E-value=0.064  Score=52.05  Aligned_cols=139  Identities=12%  Similarity=0.050  Sum_probs=89.6

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 009674          299 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  369 (529)
Q Consensus       299 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------avv~~~i-~~~~~~V~~~Gatg~~kig~  369 (529)
                      .|+|+++.=-=|....+-.-.++.+.-+++ +.-..+.||+.+|+       |++.+-+ +++.+.|.++|+-   ..|+
T Consensus        62 ~g~K~v~~~p~N~~~glp~~~g~i~L~d~~TG~p~Aild~~~lT~~RTaA~sala~~~la~~~~~~l~iiGaG---~QA~  138 (320)
T d1omoa_          62 AGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCG---TQAY  138 (320)
T ss_dssp             EEEEEEEECTTTGGGTSCSCCEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---HHHH
T ss_pred             ceEEEEEecccccccCcceEEEEEEEEecCCCcEEEEecccccccccchhHHHHHHHHhccCCccEEEEecCc---ccHH
Confidence            499998763333323333334466666665 34488999999985       4455545 5677888999877   9999


Q ss_pred             HHHHHHh--ccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc-CcceEEEE-----cCcCChhhhhcCCCCcee
Q 009674          370 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV-----GDDLTGKEQARAPKGTIF  439 (529)
Q Consensus       370 ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv-----g~~~~~~~q~~a~~G~~f  439 (529)
                      ..+++|+  +.-.+|.+  |++|+.+++.+++.... .. +..+.-++ ++++|++.     .-.++.+   +.+||+++
T Consensus       139 ~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~-~~-~~~~~~~a~~~aDiV~taT~s~~P~~~~~---~l~~G~hv  213 (320)
T d1omoa_         139 FQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG-IS-ASVQPAEEASRCDVLVTTTPSRKPVVKAE---WVEEGTHI  213 (320)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT-CC-EEECCHHHHTSSSEEEECCCCSSCCBCGG---GCCTTCEE
T ss_pred             HHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcC-Cc-cccchhhhhccccEEEEeccCcccccchh---hcCCCCeE
Confidence            9999999  44445666  99999988888755322 11 22222234 77888772     1123333   45899998


Q ss_pred             eccccc
Q 009674          440 IPYTQI  445 (529)
Q Consensus       440 ~~~~~~  445 (529)
                      .-+.-.
T Consensus       214 ~~iGs~  219 (320)
T d1omoa_         214 NAIGAD  219 (320)
T ss_dssp             EECSCC
T ss_pred             eecCCc
Confidence            888643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=94.82  E-value=0.037  Score=48.01  Aligned_cols=66  Identities=20%  Similarity=0.286  Sum_probs=43.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc---ccccceeeeccccc-CcceEEEE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV---EAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~---~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      ..+|.++|+ |  .||+++|..|+++|.  .+.|  +++++.+-....+..   ......+...++++ ++++++|+
T Consensus         5 ~~KI~IIGa-G--~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvi   78 (146)
T d1ez4a1           5 HQKVVLVGD-G--AVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVI   78 (146)
T ss_dssp             BCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEE
Confidence            458999996 7  999999999998774  5666  666665533322211   12222234448887 88888765

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=94.76  E-value=0.014  Score=51.82  Aligned_cols=66  Identities=17%  Similarity=0.167  Sum_probs=48.2

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeecccc--c-CcceEEE
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL  420 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi  420 (529)
                      ++...++|++.|+-|   .|+|++.+|++.+.++.+  |+.++.+++.+.+....  + +...+..  . .+++++|
T Consensus        14 ~~~~~k~vlIlGaGG---aarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~--~-~~~~~~~~~~~~~~diiI   84 (171)
T d1p77a1          14 WLRPNQHVLILGAGG---ATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--N-IQAVSMDSIPLQTYDLVI   84 (171)
T ss_dssp             CCCTTCEEEEECCSH---HHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--C-EEEEEGGGCCCSCCSEEE
T ss_pred             CCCCCCEEEEECCcH---HHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc--c-cchhhhccccccccceee
Confidence            344567899999975   589999999998889888  99999999988865432  2 1122222  2 5677777

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.75  E-value=0.015  Score=53.42  Aligned_cols=31  Identities=13%  Similarity=0.247  Sum_probs=28.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .+++|+|+|+||  -||+.+++.|.++|.+|+.
T Consensus         2 ~k~KILVtGatG--~iG~~l~~~L~~~G~~V~~   32 (312)
T d1qyda_           2 KKSRVLIVGGTG--YIGKRIVNASISLGHPTYV   32 (312)
T ss_dssp             CCCCEEEESTTS--TTHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            456799999999  9999999999999999877

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.73  E-value=0.054  Score=46.87  Aligned_cols=67  Identities=13%  Similarity=0.163  Sum_probs=43.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc---ccccce-eeeccccc-CcceEEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV---EAQHNL-VLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~---~~~~~l-~~~~~~~~-~~~~vwiv  421 (529)
                      +.++|.++|| |  .||+++|..|+.++.  ++.|  +++++.+-...++..   ....+. +...++++ ++++++|+
T Consensus         5 ~~~KI~IiGa-G--~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvi   80 (148)
T d1ldna1           5 GGARVVVIGA-G--FVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVI   80 (148)
T ss_dssp             TSCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEE
T ss_pred             CCCeEEEECc-C--HHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEE
Confidence            5678999998 8  999999999997775  5666  566664433333222   111221 23337777 88888775

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.71  E-value=0.019  Score=53.73  Aligned_cols=29  Identities=24%  Similarity=0.319  Sum_probs=27.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+|+|+||  -||+.+++.|.++|.+|+.
T Consensus         1 ~KILVTGatG--fIGs~lv~~Ll~~g~~V~~   29 (338)
T d1orra_           1 AKLLITGGCG--FLGSNLASFALSQGIDLIV   29 (338)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            5799999999  9999999999999999986

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.68  E-value=0.079  Score=46.70  Aligned_cols=67  Identities=18%  Similarity=0.276  Sum_probs=43.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHH----HHHhhCccccccceeeeccccc-CcceEEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE----KLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~----~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      .+.+|.++|+ |  .||+.+|..|+.+|.  ++.|  +++++.+    +|+.-.........+...++++ ++++|+|+
T Consensus        18 ~~~KI~IIGa-G--~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvi   93 (159)
T d2ldxa1          18 SRCKITVVGV-G--DVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVII   93 (159)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEE
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEE
Confidence            4668999997 7  999999999997776  5666  5565544    3433321211112123337777 88888775

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.53  E-value=0.014  Score=54.45  Aligned_cols=41  Identities=15%  Similarity=0.067  Sum_probs=36.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ++++|+|+++  -||+++|+.|+++|.+|.+  |+.++.++++..
T Consensus         1 ~TAlVTGas~--GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~   43 (252)
T d1zmta1           1 STAIVTNVKH--FGGMGSALRLSEAGHTVACHDESFKQKDELEAF   43 (252)
T ss_dssp             CEEEESSTTS--TTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh
Confidence            4689999996  8999999999999999999  888888877665

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=94.47  E-value=0.032  Score=51.89  Aligned_cols=44  Identities=14%  Similarity=0.232  Sum_probs=34.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhCc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRIP  398 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~~  398 (529)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |++ ++.+++.++.+
T Consensus         5 gKvalVTGas~--GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g   51 (247)
T d2ew8a1           5 DKLAVITGGAN--GIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG   51 (247)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcC
Confidence            46789999997  9999999999999999999  544 34444444444

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=94.45  E-value=0.0087  Score=54.52  Aligned_cols=30  Identities=20%  Similarity=0.275  Sum_probs=28.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +++|+|+||||  -||+++++.|.++|.+|..
T Consensus         3 kkKILVtGatG--~iG~~l~~~L~~~G~~V~~   32 (307)
T d1qyca_           3 RSRILLIGATG--YIGRHVAKASLDLGHPTFL   32 (307)
T ss_dssp             CCCEEEESTTS--TTHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence            57899999999  9999999999999999987

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=94.39  E-value=0.014  Score=54.80  Aligned_cols=42  Identities=12%  Similarity=0.099  Sum_probs=34.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +-+.|+++|+++  -||+++|+.|+++|.+|.+  |+.++.+.+++
T Consensus         4 ~gK~vlITGgs~--GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~   47 (254)
T d1sbya1           4 TNKNVIFVAALG--GIGLDTSRELVKRNLKNFVILDRVENPTALAE   47 (254)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTCCSEEEEEESSCCHHHHHH
T ss_pred             CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEECCcccHHHHHH
Confidence            356899999997  9999999999999999877  66666555543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.21  E-value=0.042  Score=47.13  Aligned_cols=58  Identities=24%  Similarity=0.398  Sum_probs=44.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCccccccceeeeccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      +|.++|+ |  .+|.|+++.|.+.| .++.+  |++++.++|+++.+...      .++.++ +++|+++.
T Consensus         2 kI~fIG~-G--~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~------~~~~~~v~~~Div~l   63 (152)
T d1yqga2           2 NVYFLGG-G--NMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET------SATLPELHSDDVLIL   63 (152)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE------ESSCCCCCTTSEEEE
T ss_pred             EEEEEcC-c--HHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc------ccccccccccceEEE
Confidence            4788898 5  99999999988766 88888  99999999988754322      235555 67877664

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=94.16  E-value=0.014  Score=48.70  Aligned_cols=41  Identities=15%  Similarity=0.223  Sum_probs=36.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~  397 (529)
                      ++++++|..   .+|+.+|+.|.++|.+|++  .|+++.++++++.
T Consensus         1 k~~iIiG~G---~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~   43 (134)
T d2hmva1           1 KQFAVIGLG---RFGGSIVKELHRMGHEVLAVDINEEKVNAYASYA   43 (134)
T ss_dssp             CCEEEECCS---HHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTC
T ss_pred             CEEEEECCC---HHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhC
Confidence            578999994   9999999999999999999  8999999887653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.15  E-value=0.025  Score=50.95  Aligned_cols=64  Identities=16%  Similarity=0.183  Sum_probs=48.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Ccc------ccccceeeec-cccc--CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPV------EAQHNLVLST-SYAA--HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~------~~~~~l~~~~-~~~~--~~~~vwiv  421 (529)
                      ++|.|.|+.   ..|.|+|..|++.|.+|++  |++|..++|+++ .+.      .-..+ +.++ ++++  ++++++|+
T Consensus         8 ~KI~ViGaG---~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~-i~~t~~l~~a~~~ad~iii   83 (189)
T d1n1ea2           8 NKAVVFGSG---AFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASN-ITFTSDVEKAYNGAEIILF   83 (189)
T ss_dssp             EEEEEECCS---HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTT-EEEESCHHHHHTTCSCEEE
T ss_pred             ceEEEECCC---HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccc-cccchhhhhccCCCCEEEE
Confidence            469999998   9999999999999999999  999999999865 211      11123 3344 7764  67777664

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.05  E-value=0.023  Score=54.10  Aligned_cols=50  Identities=14%  Similarity=0.270  Sum_probs=38.5

Q ss_pred             hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c----chhhHHHHHhhCc
Q 009674          347 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I----CKDDYEKLKLRIP  398 (529)
Q Consensus       347 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~----~~~~~~~l~~~~~  398 (529)
                      +.+|...+.|+|+|+||  -||+.+++.|.++|.+|..  |    +.+..+.++....
T Consensus        10 ~~~~~~~k~iLVTG~tG--fIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~   65 (341)
T d1sb8a_          10 KELPAQPKVWLITGVAG--FIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVS   65 (341)
T ss_dssp             HHHHHSCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSC
T ss_pred             HhCCCCCCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhh
Confidence            34566788999999999  9999999999999999987  1    3445555555433

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.03  E-value=0.024  Score=52.18  Aligned_cols=43  Identities=14%  Similarity=0.214  Sum_probs=33.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      .+.|+++|++|+-=||++||+.|+++|.+|.+  |+++..+.+++
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~   49 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE   49 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHH
T ss_pred             CCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            46899999995113889999999999999999  66554444443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=93.99  E-value=0.026  Score=52.73  Aligned_cols=39  Identities=23%  Similarity=0.302  Sum_probs=33.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  393 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l  393 (529)
                      -+.|+++|+++  -||+++|+.|+++|.+|.+  |+++..+..
T Consensus         5 GK~alITGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~   45 (248)
T d2d1ya1           5 GKGVLVTGGAR--GIGRAIAQAFAREGALVALCDLRPEGKEVA   45 (248)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTTHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            36789999997  9999999999999999999  777765533

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.85  E-value=0.014  Score=52.94  Aligned_cols=37  Identities=19%  Similarity=0.315  Sum_probs=31.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |+++..+
T Consensus         1 DK~alITGas~--GIG~aiA~~la~~Ga~V~i~~~~~~~~~   39 (241)
T d1uaya_           1 ERSALVTGGAS--GLGRAAALALKARGYRVVVLDLRREGED   39 (241)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHHTCEEEEEESSCCSSS
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCccccc
Confidence            36789999997  9999999999999999999  6665433

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.74  E-value=0.051  Score=47.14  Aligned_cols=65  Identities=12%  Similarity=0.189  Sum_probs=39.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-------EEEe----cchhhHHHHHhhCc---cccccceeeec-c-ccc-Ccc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI-------KVAT----ICKDDYEKLKLRIP---VEAQHNLVLST-S-YAA-HKT  416 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~-------~v~l----~~~~~~~~l~~~~~---~~~~~~l~~~~-~-~~~-~~~  416 (529)
                      -+|.++||+|  .||+++|..|++.++       .+.+    +++++.+.+..++.   ...... +... + +++ +++
T Consensus         4 ~KV~IiGA~G--~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   80 (154)
T d5mdha1           4 IRVLVTGAAG--QIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKD-VIATDKEEIAFKDL   80 (154)
T ss_dssp             EEEEESSTTS--HHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEE-EEEESCHHHHTTTC
T ss_pred             eEEEEECCCC--HHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccc-cccCcccccccCCc
Confidence            3799999999  999999999986554       2333    34455555544321   111111 1222 3 334 888


Q ss_pred             eEEEE
Q 009674          417 KIWLV  421 (529)
Q Consensus       417 ~vwiv  421 (529)
                      +|+|+
T Consensus        81 dvVVi   85 (154)
T d5mdha1          81 DVAIL   85 (154)
T ss_dssp             SEEEE
T ss_pred             eEEEE
Confidence            88776

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=93.72  E-value=0.058  Score=47.36  Aligned_cols=94  Identities=13%  Similarity=0.086  Sum_probs=62.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCcccccccee-eeccccc--CcceEEEE----cC
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV-LSTSYAA--HKTKIWLV----GD  423 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~--~~~~vwiv----g~  423 (529)
                      ++.|-++|--   .+|+++|+.|.+.|.+|..  |++++.++++++-.......-. ...++.+  .+++++|.    ++
T Consensus         2 ~~nIg~IGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~   78 (176)
T d2pgda2           2 QADIALIGLA---VMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQ   78 (176)
T ss_dssp             CBSEEEECCS---HHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTH
T ss_pred             CCcEEEEeEh---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchH
Confidence            5678999984   9999999999999999999  9999999998873222111101 1123322  45555442    00


Q ss_pred             c---CChhhhhcCCCCceeecccccCccC
Q 009674          424 D---LTGKEQARAPKGTIFIPYTQIPPRK  449 (529)
Q Consensus       424 ~---~~~~~q~~a~~G~~f~~~~~~~~~~  449 (529)
                      .   +..+-...+++|+++++.+-++|.+
T Consensus        79 ~v~~v~~~l~~~~~~g~iiid~sT~~~~~  107 (176)
T d2pgda2          79 AVDNFIEKLVPLLDIGDIIIDGGNSEYRD  107 (176)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECSCCCHHH
T ss_pred             HHHHHHHHHHhccccCcEEEecCcchhHH
Confidence            0   0112234678999999999888873

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=93.70  E-value=0.063  Score=46.13  Aligned_cols=66  Identities=14%  Similarity=0.151  Sum_probs=41.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcc-----ccccceeeeccccc-CcceEEEE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV-----EAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~-----~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      +++|.++|+ |  .||+++|..|+++++ .+.+  .++++.+.....+..     ....+.....++++ ++++++|+
T Consensus         1 r~KI~IIGa-G--~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvi   75 (142)
T d1uxja1           1 RKKISIIGA-G--FVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVV   75 (142)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEE
T ss_pred             CCeEEEECC-C--HHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEE
Confidence            358999997 8  999999999997776 5555  555555443333221     11122112337777 88877664

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.66  E-value=0.026  Score=52.10  Aligned_cols=42  Identities=21%  Similarity=0.250  Sum_probs=32.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhC
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRI  397 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~---~~~~~l~~~~  397 (529)
                      ..|+|+|++|  -||+++|+.|.++|.+ |.+  |+.   ++.+++.+++
T Consensus        10 gt~lVTGgs~--GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l   57 (259)
T d2fr1a1          10 GTVLVTGGTG--GVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAEL   57 (259)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHH
Confidence            4799999997  9999999999999985 665  553   4455554443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=93.63  E-value=0.061  Score=47.61  Aligned_cols=118  Identities=14%  Similarity=0.159  Sum_probs=66.1

Q ss_pred             HHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHh---hCccccccceeeecccc--
Q 009674          341 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKL---RIPVEAQHNLVLSTSYA--  412 (529)
Q Consensus       341 taavv~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~---~~~~~~~~~l~~~~~~~--  412 (529)
                      ..+.--+.++-..++|++.|+-   -.|+|++.+|++.|.+ +.+  |+.++.+++++   ++....... +.+.++.  
T Consensus         6 ~~~l~~~~~~l~~k~vlIlGaG---Gaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~   81 (182)
T d1vi2a1           6 IRAIKESGFDIKGKTMVLLGAG---GASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTVTDLADQ   81 (182)
T ss_dssp             HHHHHHTTCCCTTCEEEEECCS---HHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCE-EEEEETTCH
T ss_pred             HHHHHHcCCCcCCCEEEEECCc---HHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcc-eEeeecccc
Confidence            3344334555567899999996   4689999999988885 445  77776665543   333333222 3333332  


Q ss_pred             ----c--CcceEEEEcCcCC---------hhhhhcCCCCceeecccccCccC------CC-CCceeecCCccc
Q 009674          413 ----A--HKTKIWLVGDDLT---------GKEQARAPKGTIFIPYTQIPPRK------LR-KDCFYHSTPAMI  463 (529)
Q Consensus       413 ----~--~~~~vwivg~~~~---------~~~q~~a~~G~~f~~~~~~~~~~------~R-~dc~y~~~~a~~  463 (529)
                          +  .+++++|--..+.         +.+....+++.+++|+. ..|.+      .| .-|.++.+..|-
T Consensus        82 ~~~~~~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~-Y~p~~T~ll~~a~~~g~~~i~Gl~Ml  153 (182)
T d1vi2a1          82 QAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGML  153 (182)
T ss_dssp             HHHHHHHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC-CSSSSCHHHHHHHTTTCEEECHHHHH
T ss_pred             cchhhhhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhh-cCccccHHHHHHHHCcCeEeccHHHH
Confidence                1  3557777322111         12233457777777776 33331      11 445566655553

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=93.58  E-value=0.053  Score=46.93  Aligned_cols=65  Identities=17%  Similarity=0.238  Sum_probs=39.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEecc----hhhHH----HHHhhCccccccceeeeccccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI--KVATIC----KDDYE----KLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l~~----~~~~~----~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      ++|.++||+|  .||+++|..|..++.  .+.|.+    +++.+    +|+.-.+...... +...++++ ++++++|+
T Consensus         1 sKV~IiGaaG--~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~-i~~~~~~~~~~aDiVvi   76 (142)
T d1o6za1           1 TKVSVVGAAG--TVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTR-VRQGGYEDTAGSDVVVI   76 (142)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCE-EEECCGGGGTTCSEEEE
T ss_pred             CeEEEECCCC--cHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCce-EeeCCHHHhhhcCEEEE
Confidence            4799999999  999999999996665  455522    33333    3333222221111 33347777 88888664

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.53  E-value=0.022  Score=52.36  Aligned_cols=44  Identities=16%  Similarity=0.330  Sum_probs=35.2

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCcccc
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPVEA  401 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~~~~~~  401 (529)
                      .+|+|+++  -||+|+|+.|+++|.+|.+  |+ ++..+++.+++..+.
T Consensus         4 AlVTGas~--GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~   50 (266)
T d1mxha_           4 AVITGGAR--RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR   50 (266)
T ss_dssp             EEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS
T ss_pred             EEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc
Confidence            47889997  8999999999999999999  55 445677777755543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=93.47  E-value=0.11  Score=45.74  Aligned_cols=67  Identities=19%  Similarity=0.270  Sum_probs=43.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHH----HHHhhCccccccceeeeccccc-CcceEEEE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE----KLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~----~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      ...+|.++|+ |  .||+++|..|+.+|.  ++.|  +++++.+    +|+.-.........+...++++ ++++++|+
T Consensus        19 ~~~KV~IIGa-G--~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVi   94 (160)
T d1i0za1          19 PNNKITVVGV-G--QVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVV   94 (160)
T ss_dssp             CSSEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEE
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEE
Confidence            3569999997 7  999999999997777  4555  5566553    3333211111122123347777 88888775

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=93.38  E-value=0.055  Score=42.31  Aligned_cols=54  Identities=20%  Similarity=0.278  Sum_probs=41.8

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          340 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       340 ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +||+..+..+     ++...+|++.|++|  -||.+..+.+...|.+|..  +++|+.+.+++
T Consensus        14 lTA~~al~~~~~~~~~~~~~~vlI~gasG--gVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          14 FTAMLCVMALEDAGVRPQDGEIVVTGASG--GVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCEEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccCCCcEEEEeCCC--cHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence            5665544322     34567899999999  9999999987799999986  78888887754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.012  Score=50.34  Aligned_cols=36  Identities=17%  Similarity=0.324  Sum_probs=30.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  393 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l  393 (529)
                      +|+++|+ |  .||+++|..|++.|.+|++  |++++.+.+
T Consensus         2 kI~IiGa-G--~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~   39 (167)
T d1ks9a2           2 KITVLGC-G--ALGQLWLTALCKQGHEVQGWLRVPQPYCSV   39 (167)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHHCCCceEEEEcCHHHhhhh
Confidence            6899999 7  9999999999999999999  766655433

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.33  E-value=0.025  Score=50.76  Aligned_cols=102  Identities=9%  Similarity=0.089  Sum_probs=60.8

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh-Cccccccceeeec--cccc--CcceEEEE
Q 009674          350 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR-IPVEAQHNLVLST--SYAA--HKTKIWLV  421 (529)
Q Consensus       350 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~-~~~~~~~~l~~~~--~~~~--~~~~vwiv  421 (529)
                      +-.-++|+++|...  =||+-+|..|.++|..|++   ++.+++..-... +......++-..+  .+++  +.+||+|.
T Consensus        26 ~l~GK~vvVIGrS~--iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          26 RLYGKKCIVINRSE--IVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             TTTTCEEEEECCCT--TTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECCcc--ccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence            34568999999996  8999999999999999998   222222210000 1111112211222  2343  46788885


Q ss_pred             cCc-----CChhhhhcCCCCceeecccccCcc---CCCCCceee
Q 009674          422 GDD-----LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYH  457 (529)
Q Consensus       422 g~~-----~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~  457 (529)
                      +-+     ++.+..   ++|++++|+. ++..   +.++-|-|+
T Consensus       104 avG~p~~~i~~d~i---k~GavvIDvG-i~~~~~~~v~~~a~~i  143 (171)
T d1edza1         104 GVPSENYKFPTEYI---KEGAVCINFA-CTKNFSDDVKEKASLY  143 (171)
T ss_dssp             CCCCTTCCBCTTTS---CTTEEEEECS-SSCCBCGGGGTTEEEE
T ss_pred             ccCCCccccChhhc---ccCceEeecc-cccccccchhheeeEE
Confidence            432     455544   9999999998 5433   344445454

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.30  E-value=0.029  Score=52.48  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=27.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+++|+||  -||+.+++.|.++|.+|.-
T Consensus         1 k~vLItG~tG--fiG~~l~~~Ll~~g~~V~~   29 (321)
T d1rpna_           1 RSALVTGITG--QDGAYLAKLLLEKGYRVHG   29 (321)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            5899999999  9999999999999999975

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.29  E-value=0.016  Score=53.93  Aligned_cols=38  Identities=26%  Similarity=0.252  Sum_probs=33.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      ..+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++.+
T Consensus         6 ~gK~~lITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~   45 (237)
T d1uzma1           6 VSRSVLVTGGNR--GIGLAIAQRLAADGHKVAVTHRGSGAPK   45 (237)
T ss_dssp             CCCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSSCCCT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCcchhc
Confidence            567899999997  9999999999999999999  7666554

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.27  E-value=0.033  Score=48.32  Aligned_cols=102  Identities=15%  Similarity=0.154  Sum_probs=69.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--Ec------
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG------  422 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg------  422 (529)
                      +|-++|--   .+|+++|+.|.+.|.+|..  |++++.++++++-...       ..+.++  +++++++  |-      
T Consensus         2 kIgiIGlG---~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~d~ii~~v~~~~~v~   71 (161)
T d1vpda2           2 KVGFIGLG---IMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-------ASTAKAIAEQCDVIITMLPNSPHVK   71 (161)
T ss_dssp             EEEEECCS---TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-------CSSHHHHHHHCSEEEECCSSHHHHH
T ss_pred             EEEEEehh---HHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh-------cccHHHHHhCCCeEEEEcCCHHHHH
Confidence            47788874   9999999999999999999  8999999887752211       223343  5565544  22      


Q ss_pred             CcCC--hhhhhcCCCCceeecccccCcc-------CCC-CCceeecCCccccCC
Q 009674          423 DDLT--GKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP  466 (529)
Q Consensus       423 ~~~~--~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~  466 (529)
                      +.+.  ..-...+++|+++++.+-.+|+       .++ ++..|.+.|.+.-|.
T Consensus        72 ~v~~~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapv~gg~~  125 (161)
T d1vpda2          72 EVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEP  125 (161)
T ss_dssp             HHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHH
T ss_pred             HHHhCCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCceecccccCChh
Confidence            1221  1234467899999999998886       222 566788777765444

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.21  E-value=0.056  Score=47.58  Aligned_cols=67  Identities=16%  Similarity=0.166  Sum_probs=46.4

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccce---eeeccccc--CcceEEEE
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL---VLSTSYAA--HKTKIWLV  421 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l---~~~~~~~~--~~~~vwiv  421 (529)
                      -..++|++.|+-|   .++|++.+|.+.| ++.+  |+.++.++|.+++........   +...+++.  .+.+++|.
T Consensus        16 ~~~k~vlIlGaGG---~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn   89 (177)
T d1nvta1          16 VKDKNIVIYGAGG---AARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIIN   89 (177)
T ss_dssp             CCSCEEEEECCSH---HHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEE
T ss_pred             cCCCEEEEECCcH---HHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhcc
Confidence            3567999999985   6899999998877 7777  999999999887554332221   12224443  55677773

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.19  E-value=0.064  Score=46.41  Aligned_cols=25  Identities=16%  Similarity=0.186  Sum_probs=22.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI  380 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~  380 (529)
                      ++|.++||+|  .||+++|..|++++.
T Consensus         1 sKv~IiGA~G--~VG~~~A~~l~~~~~   25 (144)
T d1mlda1           1 AKVAVLGASG--GIGQPLSLLLKNSPL   25 (144)
T ss_dssp             CEEEEETTTS--TTHHHHHHHHHTCTT
T ss_pred             CeEEEECCCC--hHHHHHHHHHHhCCc
Confidence            4799999999  999999999997776

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.12  E-value=0.092  Score=45.43  Aligned_cols=28  Identities=21%  Similarity=0.249  Sum_probs=24.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l  384 (529)
                      +|.++||+|  .||+++|..|..++.  ++.|
T Consensus         2 KV~IiGA~G--~VG~~~a~~l~~~~l~~el~L   31 (145)
T d1hyea1           2 KVTIIGASG--RVGSATALLLAKEPFMKDLVL   31 (145)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTCTTCCEEEE
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCccccccc
Confidence            589999999  999999999998884  5555

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=93.03  E-value=0.034  Score=52.02  Aligned_cols=30  Identities=23%  Similarity=0.220  Sum_probs=28.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +++|+|+|+||  =||+++++.|.++|..|+.
T Consensus         2 kkkIlITG~tG--fiG~~l~~~L~~~g~~vi~   31 (315)
T d1e6ua_           2 KQRVFIAGHRG--MVGSAIRRQLEQRGDVELV   31 (315)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHTTCTTEEEE
T ss_pred             CCEEEEEcCCc--HHHHHHHHHHHHCcCEEEE
Confidence            56899999999  9999999999999998887

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.96  E-value=0.064  Score=46.20  Aligned_cols=58  Identities=12%  Similarity=0.157  Sum_probs=44.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv  421 (529)
                      +|.++|.-   .+|+|+++.|.+.|.++.+  |++++.++++++.+...      .++.++  +++++++.
T Consensus         2 kIg~IG~G---~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~------~~~~~~~~~~~dvIil   63 (152)
T d2ahra2           2 KIGIIGVG---KMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY------AMSHQDLIDQVDLVIL   63 (152)
T ss_dssp             EEEEECCS---HHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB------CSSHHHHHHTCSEEEE
T ss_pred             EEEEEecc---HHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee------echhhhhhhccceeee
Confidence            46788876   9999999999999999999  88999999987754332      235553  56667553

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=92.86  E-value=0.11  Score=44.88  Aligned_cols=65  Identities=15%  Similarity=0.218  Sum_probs=41.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc---ccc-cceeeeccccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV---EAQ-HNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~---~~~-~~l~~~~~~~~-~~~~vwiv  421 (529)
                      ++|.++|+ |  .||+++|..|+.+|.  ++.|  .++++.+.....+..   ... ...+...++++ ++++++|+
T Consensus         2 kKI~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVi   75 (146)
T d1hyha1           2 RKIGIIGL-G--NVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVIS   75 (146)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEE
T ss_pred             CeEEEECc-C--HHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEE
Confidence            68999996 7  999999999997764  5656  667765433333221   111 11123347777 88888664

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=92.86  E-value=0.13  Score=44.44  Aligned_cols=65  Identities=15%  Similarity=0.201  Sum_probs=41.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCccccccceeeeccccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~----l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      .+|.++|+ |  .||+++|..|+.+++  ++.|  +++++.+-    |+.-.............++++ ++++++|+
T Consensus         2 ~Ki~IIGa-G--~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVi   75 (143)
T d1llda1           2 TKLAVIGA-G--AVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI   75 (143)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEE
Confidence            46899998 8  999999999997776  4555  56665543    333211111122123337777 88888664

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.86  E-value=0.047  Score=52.45  Aligned_cols=47  Identities=19%  Similarity=0.186  Sum_probs=37.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c---------chhhHHHHHhhCccc
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---------CKDDYEKLKLRIPVE  400 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~---------~~~~~~~l~~~~~~~  400 (529)
                      +.+.++++|+++  -||+++|+.|+++|.+|.+  +         +++..+++.+++...
T Consensus         6 ~gKvalITGas~--GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~   63 (302)
T d1gz6a_           6 DGRVVLVTGAGG--GLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR   63 (302)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc
Confidence            356789999997  8999999999999999997  2         355666666665443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=92.73  E-value=0.069  Score=47.68  Aligned_cols=67  Identities=9%  Similarity=0.154  Sum_probs=39.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-------EEEe----cchhhHHHHHhhCccc---cccceeeec-cccc-Ccc
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI-------KVAT----ICKDDYEKLKLRIPVE---AQHNLVLST-SYAA-HKT  416 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~-------~v~l----~~~~~~~~l~~~~~~~---~~~~l~~~~-~~~~-~~~  416 (529)
                      .-+|.++||+|  .||+.++..|++.++       .+.+    .+++.++-+..++...   .-...+-.+ ++++ +++
T Consensus        24 ~~kV~I~GA~G--~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~a  101 (175)
T d7mdha1          24 LVNIAVSGAAG--MISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDV  101 (175)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC
T ss_pred             CcEEEEECCCc--HHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCC
Confidence            44899999999  999999999996443       3444    3344555554432221   111111122 3445 888


Q ss_pred             eEEEE
Q 009674          417 KIWLV  421 (529)
Q Consensus       417 ~vwiv  421 (529)
                      +++|+
T Consensus       102 DvVvi  106 (175)
T d7mdha1         102 DWALL  106 (175)
T ss_dssp             SEEEE
T ss_pred             ceEEE
Confidence            77665

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.53  E-value=0.079  Score=45.88  Aligned_cols=103  Identities=14%  Similarity=0.157  Sum_probs=67.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccccc--CcceEEE--EcCcCCh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLTG  427 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~~~  427 (529)
                      ++|-++|--   .+|+++|+.|.+.|.+|..  |++++.+.++++-....       .+.++  +.+++++  +.+.-+.
T Consensus         2 ~kIg~IGlG---~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~~~~diii~~v~~~~~~   71 (162)
T d3cuma2           2 KQIAFIGLG---HMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA-------RSARDAVQGADVVISMLPASQHV   71 (162)
T ss_dssp             CEEEEECCS---TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-------SSHHHHHTSCSEEEECCSCHHHH
T ss_pred             CEEEEEEEH---HHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcccc-------chhhhhccccCeeeecccchhhH
Confidence            468899875   9999999999999999999  88888888876622211       12222  4454433  2221111


Q ss_pred             h--------hhhcCCCCceeecccccCcc-------CCC-CCceeecCCccccCC
Q 009674          428 K--------EQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP  466 (529)
Q Consensus       428 ~--------~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~  466 (529)
                      +        -.....+|.++++.+-++|+       .++ ++..|.+.|..--|.
T Consensus        72 ~~v~~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~dapv~Gg~~  126 (162)
T d3cuma2          72 EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTA  126 (162)
T ss_dssp             HHHHHSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHH
T ss_pred             HHHHhccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEEecccccCcc
Confidence            1        23357889999999998886       222 556677777655443

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.53  E-value=0.052  Score=51.32  Aligned_cols=30  Identities=20%  Similarity=0.297  Sum_probs=28.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +++|+|+|++|  -||+++++.|.++|.+|+.
T Consensus         1 kKKIlVtG~sG--fiG~~lv~~L~~~g~~V~~   30 (312)
T d2b69a1           1 RKRILITGGAG--FVGSHLTDKLMMDGHEVTV   30 (312)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            47899999999  9999999999999999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.41  E-value=0.13  Score=44.59  Aligned_cols=55  Identities=16%  Similarity=0.103  Sum_probs=43.2

Q ss_pred             hhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          339 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       339 sltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      -+||+-.+...  ++..+.|++.|++|  -||.+.++.+...|.+|+.  +++++.+.+++
T Consensus        13 ~~TA~~al~~~~~~~~g~~VlV~Ga~G--~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~   71 (174)
T d1yb5a2          13 YFTAYRALIHSACVKAGESVLVHGASG--GVGLAACQIARAYGLKILGTAGTEEGQKIVLQ   71 (174)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEEeccc--cccccccccccccCcccccccccccccccccc
Confidence            35677666444  34566899999998  9999999998899999887  77888877764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.37  E-value=0.043  Score=51.59  Aligned_cols=30  Identities=17%  Similarity=0.170  Sum_probs=28.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++.|+|+||||  -||+.+++.|-++|.+|.-
T Consensus         1 ~k~~LVTGatG--fiG~~lv~~Ll~~g~~V~~   30 (339)
T d1n7ha_           1 RKIALITGITG--QDGSYLTEFLLGKGYEVHG   30 (339)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCCcc--HHHHHHHHHHHHCcCEEEE
Confidence            47899999999  9999999999999999986

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=92.36  E-value=0.033  Score=44.16  Aligned_cols=29  Identities=10%  Similarity=0.090  Sum_probs=26.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .++|+|.|.-   +-|.++|++|+++|.+|++
T Consensus         5 ~K~v~ViGlG---~sG~s~a~~L~~~g~~v~~   33 (93)
T d2jfga1           5 GKNVVIIGLG---LTGLSCVDFFLARGVTPRV   33 (93)
T ss_dssp             TCCEEEECCS---HHHHHHHHHHHHTTCCCEE
T ss_pred             CCEEEEEeEC---HHHHHHHHHHHHCCCEEEE
Confidence            4579999995   8899999999999999999

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=92.23  E-value=0.059  Score=47.51  Aligned_cols=55  Identities=25%  Similarity=0.294  Sum_probs=44.0

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          340 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       340 ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +||+..++.+     .++...|++.||+|  -||.+.++.....|.+|+-  +++++.+.+++-
T Consensus         6 lTA~~a~~~L~~~g~~~~~~~VLV~gaaG--gVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l   67 (167)
T d1tt7a2           6 FTAALSVHRLEQNGLSPEKGSVLVTGATG--GVGGIAVSMLNKRGYDVVASTGNREAADYLKQL   67 (167)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEESTTS--HHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEeCCcc--hHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh
Confidence            6888776654     22344599999999  9999999988899999987  788888887655

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.15  E-value=0.065  Score=48.53  Aligned_cols=88  Identities=10%  Similarity=0.052  Sum_probs=58.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEE--------E
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------V  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------v  421 (529)
                      ..++|-++|.-   .||+.+|+.|..-|.+|...++..-.....+      .......++++  +.+++++        -
T Consensus        48 ~gktvgIiG~G---~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~------~~~~~~~~l~~ll~~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          48 RGETLGIIGLG---RVGQAVALRAKAFGFNVLFYDPYLSDGVERA------LGLQRVSTLQDLLFHSDCVTLHCGLNEHN  118 (193)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECTTSCTTHHHH------HTCEECSSHHHHHHHCSEEEECCCCCTTC
T ss_pred             eCceEEEeccc---cccccceeeeeccccceeeccCcccccchhh------hccccccchhhccccCCEEEEeecccccc
Confidence            45688999987   9999999999999999998222111111111      11112345554  5666644        2


Q ss_pred             cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674          422 GDDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       422 g~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                      -..++.+.+.+|++|+.+|-++|   |+.+
T Consensus       119 ~~li~~~~l~~mk~~a~lIN~sRG~ivde~  148 (193)
T d1mx3a1         119 HHLINDFTVKQMRQGAFLVNTARGGLVDEK  148 (193)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred             hhhhhHHHHhccCCCCeEEecCCceEEcHH
Confidence            23567778889999999999999   5554

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=92.15  E-value=0.096  Score=45.34  Aligned_cols=57  Identities=11%  Similarity=0.040  Sum_probs=47.2

Q ss_pred             ChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          338 SSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       338 nsltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +-+||+..+.+..  +..+.|++.|+.|  -+|.++++.....|.+|+.  +++++.+.+++.
T Consensus        12 ~~~TA~~al~~~~~l~~g~~Vlv~ga~g--~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l   72 (179)
T d1qora2          12 KGLTVYYLLRKTYEIKPDEQFLFHAAAG--GVGLIACQWAKALGAKLIGTVGTAQKAQSALKA   72 (179)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTB--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEcccc--ccchHHHHHHHHhCCeEeecccchHHHHHHHhc
Confidence            4578888887663  3467899999998  9999999998899999988  888888887754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=92.15  E-value=0.13  Score=45.01  Aligned_cols=55  Identities=22%  Similarity=0.122  Sum_probs=46.1

Q ss_pred             hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          340 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       340 ltaavv~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +||+-.+...-  +.-..|++.||+|  .||++.++.....|.+|..  +++++.+.+++.
T Consensus        15 lTA~~al~~~~~v~~G~~VlV~ga~g--gvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~   73 (182)
T d1v3va2          15 LTAYFGLLEVCGVKGGETVLVSAAAG--AVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI   73 (182)
T ss_dssp             HHHHHHHHTTTCCCSSCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCEEEEEeCCC--chhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh
Confidence            68988887663  3456899999998  9999999988899999987  788888877766

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.12  E-value=0.08  Score=45.52  Aligned_cols=40  Identities=25%  Similarity=0.258  Sum_probs=32.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~  396 (529)
                      ++|.++|. |  .+|..+|+.|.+.|.  +|..  +|++.++..++.
T Consensus         2 k~I~IIG~-G--~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~   45 (171)
T d2g5ca2           2 QNVLIVGV-G--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL   45 (171)
T ss_dssp             CEEEEESC-S--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT
T ss_pred             CEEEEEcc-C--HHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHh
Confidence            36899996 6  999999999998885  5554  788888877766

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=92.01  E-value=0.047  Score=49.90  Aligned_cols=33  Identities=15%  Similarity=0.268  Sum_probs=29.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      .+|+++|+++  -||+|+|+.|.++|.+|.+  |+++
T Consensus         3 gkVlITGas~--GIG~aia~~l~~~G~~V~~~~~~~~   37 (235)
T d1ooea_           3 GKVIVYGGKG--ALGSAILEFFKKNGYTVLNIDLSAN   37 (235)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCch
Confidence            4799999997  9999999999999999998  6554

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.88  E-value=0.12  Score=44.73  Aligned_cols=55  Identities=20%  Similarity=0.123  Sum_probs=43.9

Q ss_pred             hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          340 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       340 ltaavv~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +||+..+...  .+..+.|++.|++|  -||.+.++.+...|.++..  +++++.+.+++.
T Consensus        11 ~TA~~al~~~~~~~~g~~VlI~ga~g--~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~   69 (183)
T d1pqwa_          11 LTAWHSLCEVGRLSPGERVLIHSATG--GVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL   69 (183)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEETTTTS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECCCC--Ccccccchhhccccccceeeecccccccccccc
Confidence            6777666444  34567899999997  9999999998899999887  788888887753

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=91.85  E-value=0.05  Score=51.52  Aligned_cols=36  Identities=17%  Similarity=0.140  Sum_probs=31.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  390 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~  390 (529)
                      .++|+|+|+||  -||+.+++.|.++|.+|..  |++...
T Consensus         8 ~KkILVTG~tG--fIGs~lv~~Ll~~g~~V~~~~r~~~~~   45 (356)
T d1rkxa_           8 GKRVFVTGHTG--FKGGWLSLWLQTMGATVKGYSLTAPTV   45 (356)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCSSS
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCcc
Confidence            47899999999  9999999999999999987  555433

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.85  E-value=0.14  Score=44.31  Aligned_cols=67  Identities=10%  Similarity=0.113  Sum_probs=40.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc---------EEEe--cchhhHHHHHhhCcccccccee---eec--cccc-Ccce
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI---------KVAT--ICKDDYEKLKLRIPVEAQHNLV---LST--SYAA-HKTK  417 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~---------~v~l--~~~~~~~~l~~~~~~~~~~~l~---~~~--~~~~-~~~~  417 (529)
                      +|.++||+|  .||+++|..|++.++         .+..  .+.+..+.+..++... ...++   .++  ++++ ++++
T Consensus         6 KV~IiGA~G--~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ad   82 (154)
T d1y7ta1           6 RVAVTGAAG--QIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC-AFPLLAGLEATDDPKVAFKDAD   82 (154)
T ss_dssp             EEEESSTTS--HHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-TCTTEEEEEEESCHHHHTTTCS
T ss_pred             EEEEECCCC--HHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcc-ccccccccccCCchhhhccccc
Confidence            799999999  999999999996654         2222  4445555444332221 11111   222  3445 8888


Q ss_pred             EEEEcCc
Q 009674          418 IWLVGDD  424 (529)
Q Consensus       418 vwivg~~  424 (529)
                      |+|+-.+
T Consensus        83 vViitaG   89 (154)
T d1y7ta1          83 YALLVGA   89 (154)
T ss_dssp             EEEECCC
T ss_pred             EEEeecC
Confidence            8776333

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.80  E-value=0.13  Score=45.68  Aligned_cols=99  Identities=17%  Similarity=0.172  Sum_probs=65.1

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeec-cc
Q 009674          340 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SY  411 (529)
Q Consensus       340 ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~-~~  411 (529)
                      +||+-.++.+     .+....|++.||+|  -||.+..+.....|.+|..  +++++.+.+++ +......+   .+ ..
T Consensus        14 lTA~~a~~~L~~~g~~~~g~~VLI~gaaG--GVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-lGa~~vi~---~~~~~   87 (176)
T d1xa0a2          14 FTAALSIHRLEEHGLTPERGPVLVTGATG--GVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGAKEVLA---REDVM   87 (176)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTCSEEEE---CC---
T ss_pred             HHHHHHHHHHHHhCCCCCCCEEEEEeccc--hHHHHHHHHHHHcCCceEEecCchHHHHHHHh-cccceeee---cchhH
Confidence            7888776654     23356799999999  9999999998899999888  77777776654 34333111   22 11


Q ss_pred             cc-------CcceEEE--EcCcCChhhhhcCCCCceeecccc
Q 009674          412 AA-------HKTKIWL--VGDDLTGKEQARAPKGTIFIPYTQ  444 (529)
Q Consensus       412 ~~-------~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~~  444 (529)
                      .+       ...++++  +|...-++.+....+|-+++.+..
T Consensus        88 ~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~  129 (176)
T d1xa0a2          88 AERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGL  129 (176)
T ss_dssp             ------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSC
T ss_pred             HHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeec
Confidence            11       3445555  665566666666667777776663

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=91.73  E-value=0.11  Score=45.14  Aligned_cols=70  Identities=17%  Similarity=0.152  Sum_probs=44.7

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccc----cccceeeec-ccc-c-CcceE
Q 009674          349 LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE----AQHNLVLST-SYA-A-HKTKI  418 (529)
Q Consensus       349 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~----~~~~l~~~~-~~~-~-~~~~v  418 (529)
                      +.+++.+|.++|+ |  .||+.+|..|+..++ ++.|  .++++.+.....+...    .....+..+ +++ + +++++
T Consensus         3 ~~~k~~KI~IIGa-G--~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adi   79 (154)
T d1pzga1           3 LVQRRKKVAMIGS-G--MIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADC   79 (154)
T ss_dssp             CCSCCCEEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSE
T ss_pred             cccCCCcEEEECC-C--HHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCe
Confidence            4567889999998 8  999999999997776 5555  5666655444433221    111112233 554 3 78888


Q ss_pred             EEE
Q 009674          419 WLV  421 (529)
Q Consensus       419 wiv  421 (529)
                      +|+
T Consensus        80 Vvi   82 (154)
T d1pzga1          80 VIV   82 (154)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            775

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=91.50  E-value=0.16  Score=48.12  Aligned_cols=28  Identities=25%  Similarity=0.290  Sum_probs=26.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +|+|+|+||  -||+.+++.|.++|.+|..
T Consensus         2 KiLItG~tG--fIG~~l~~~L~~~g~~V~~   29 (338)
T d1udca_           2 RVLVTGGSG--YIGSHTCVQLLQNGHDVII   29 (338)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            589999999  9999999999999999987

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.33  E-value=0.22  Score=44.37  Aligned_cols=89  Identities=8%  Similarity=0.060  Sum_probs=60.1

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchh-hHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD-DYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~-~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      -..++|.++|.-   .||+++|+.|..-|.+|...+.. .-+...++...      ....++++  ++++++++      
T Consensus        42 l~~~~vgiiG~G---~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~------~~~~~l~~~l~~sD~v~~~~plt~  112 (188)
T d2naca1          42 LEAMHVGTVAAG---RIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNL------TWHATREDMYPVCDVVTLNCPLHP  112 (188)
T ss_dssp             CTTCEEEEECCS---HHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTC------EECSSHHHHGGGCSEEEECSCCCT
T ss_pred             ccccceeecccc---ccchhhhhhhhccCceEEEEeeccccccccccccc------cccCCHHHHHHhccchhhcccccc
Confidence            356788999976   99999999999999999982211 11111111111      11334444  56766553      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                        -..|+.++...|++|+.||-++|   |+.+
T Consensus       113 ~T~~li~~~~l~~mk~ga~lIN~aRG~ivd~~  144 (188)
T d2naca1         113 ETEHMINDETLKLFKRGAYIVNTARGKLCDRD  144 (188)
T ss_dssp             TTTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred             cchhhhHHHHHHhCCCCCEEEecCchhhhhHH
Confidence              35678899999999999999999   6655

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=91.30  E-value=0.11  Score=44.17  Aligned_cols=31  Identities=16%  Similarity=0.243  Sum_probs=28.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      .-++|.++|.+|  .+|+.+|+.|.+.|.+|..
T Consensus         8 ~~~kI~iIGg~G--~mG~~la~~L~~~G~~V~~   38 (152)
T d2pv7a2           8 DIHKIVIVGGYG--KLGGLFARYLRASGYPISI   38 (152)
T ss_dssp             TCCCEEEETTTS--HHHHHHHHHHHTTTCCEEE
T ss_pred             CCCeEEEEcCCC--HHHHHHHHHHHHcCCCcEe
Confidence            456899999998  9999999999999999999

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.29  E-value=0.066  Score=48.75  Aligned_cols=32  Identities=19%  Similarity=0.285  Sum_probs=27.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  388 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~  388 (529)
                      -|+++|+++  -||+|+|+.|.+.|.+|.+  |+++
T Consensus         3 VvlITGas~--GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           3 IIVISGCAT--GIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             EEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECChH
Confidence            478899997  9999999999999999987  5443

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=91.26  E-value=0.088  Score=46.76  Aligned_cols=55  Identities=20%  Similarity=0.260  Sum_probs=43.7

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          340 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       340 ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +||+..++.+     .++..+|++.||+|  -||.+..+.....|.+|.-  +++++.+.+++.
T Consensus        14 lTA~~a~~~l~~~g~~~~~~~vlV~gasG--GVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~l   75 (177)
T d1o89a2          14 FTAMLCVMALEDAGVRPQDGEIVVTGASG--GVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL   75 (177)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCEEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEccc--cchHHHHHHHHHcCCCeEEEecchhHHHHHHhh
Confidence            7888766544     33445899999998  9999999999999999886  788887777543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.08  E-value=0.1  Score=49.40  Aligned_cols=27  Identities=19%  Similarity=0.186  Sum_probs=22.6

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      |+++|+++  =||+|+|+.|+++|-++.+
T Consensus         5 vlITGass--GIG~a~A~~la~~Ga~v~~   31 (285)
T d1jtva_           5 VLITGCSS--GIGLHLAVRLASDPSQSFK   31 (285)
T ss_dssp             EEESCCSS--HHHHHHHHHHHTCTTCCEE
T ss_pred             EEEccCCC--HHHHHHHHHHHHCCCCeEE
Confidence            45679996  9999999999999977543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=90.94  E-value=0.17  Score=44.09  Aligned_cols=97  Identities=13%  Similarity=0.153  Sum_probs=62.0

Q ss_pred             hhHHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccccccceeeeccc----
Q 009674          339 SLAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY----  411 (529)
Q Consensus       339 sltaavv~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~----  411 (529)
                      -+||+-.++... +..++|++.|++|  -||.+.++.+...|.+|..  +++++.+.+++ ++.+.-   +...+.    
T Consensus        13 ~~TA~~al~~~~~~~g~~VlI~ga~G--~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-lGa~~~---i~~~~~~~~~   86 (171)
T d1iz0a2          13 FLTAYLALKRAQARPGEKVLVQAAAG--ALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEA---ATYAEVPERA   86 (171)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEESSTTB--HHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSEE---EEGGGHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCEEEEEeccc--cchhhhhhhhcccccccccccccccccccccc-ccccee---eehhhhhhhh
Confidence            367777777654 3556899999998  9999999988899999887  77888887764 444331   122221    


Q ss_pred             cc-CcceEEE--EcCcCChhhhhcCCCCceeecc
Q 009674          412 AA-HKTKIWL--VGDDLTGKEQARAPKGTIFIPY  442 (529)
Q Consensus       412 ~~-~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~  442 (529)
                      .+ ..+++++  +|+.+ ++-...+.+|-.++-+
T Consensus        87 ~~~~g~D~v~d~~G~~~-~~~~~~l~~~G~~v~~  119 (171)
T d1iz0a2          87 KAWGGLDLVLEVRGKEV-EESLGLLAHGGRLVYI  119 (171)
T ss_dssp             HHTTSEEEEEECSCTTH-HHHHTTEEEEEEEEEC
T ss_pred             hccccccccccccchhH-HHHHHHHhcCCcEEEE
Confidence            11 4456655  66544 2334444555555554

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.91  E-value=0.19  Score=44.19  Aligned_cols=64  Identities=11%  Similarity=0.081  Sum_probs=42.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--c--chhhHHHHHhh-Cccccc----cceeeec-cccc--CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLR-IPVEAQ----HNLVLST-SYAA--HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~--~~~~~~~l~~~-~~~~~~----~~l~~~~-~~~~--~~~~vwiv  421 (529)
                      +|.+.|+-   ..|.|+|..|++.|.+|.+  |  +++..+++++. -.....    ...+..+ ++++  ++++++|+
T Consensus         2 kI~ViGaG---~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~   77 (180)
T d1txga2           2 IVSILGAG---AMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLL   77 (180)
T ss_dssp             EEEEESCC---HHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred             EEEEECCC---HHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhc
Confidence            58899996   9999999999999999999  5  44456666554 111111    1112233 6664  77877665

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.87  E-value=0.11  Score=46.72  Aligned_cols=40  Identities=23%  Similarity=0.189  Sum_probs=34.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ++|.|+|| |  -+|+.+|..+++.|.+|++  ++++.+++.++.
T Consensus         5 kkvaViGa-G--~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-G--LMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-C--HHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            58999999 5  9999999999999999999  777766655443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.85  E-value=0.075  Score=50.12  Aligned_cols=29  Identities=24%  Similarity=0.304  Sum_probs=26.5

Q ss_pred             cEE-EEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHV-LLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V-~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++| +|+|+||  =||+.+++.|-++|.+|.-
T Consensus         1 kKI~LVTG~tG--fIG~~l~~~Ll~~g~~V~~   30 (347)
T d1t2aa_           1 RNVALITGITG--QDGSYLAEFLLEKGYEVHG   30 (347)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEecCCc--HHHHHHHHHHHHCcCEEEE
Confidence            467 8999999  9999999999999999985

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.82  E-value=0.089  Score=48.12  Aligned_cols=30  Identities=17%  Similarity=0.161  Sum_probs=28.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      -+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         2 gK~vlITGas~--GIG~a~a~~l~~~G~~V~~   31 (236)
T d1dhra_           2 ARRVLVYGGRG--ALGSRCVQAFRARNWWVAS   31 (236)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHTTTCEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            47899999997  9999999999999999987

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=90.81  E-value=0.14  Score=44.02  Aligned_cols=65  Identities=14%  Similarity=0.171  Sum_probs=38.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc--ccccceeeec-cccc-CcceEEEE
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV--EAQHNLVLST-SYAA-HKTKIWLV  421 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~--~~~~~l~~~~-~~~~-~~~~vwiv  421 (529)
                      .+|.++|+ |  +||+++|..|..++.  ++.|  +++++.+....++..  ....+....+ ++++ ++++++|+
T Consensus         2 ~KI~IIGa-G--~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvi   74 (142)
T d1y6ja1           2 SKVAIIGA-G--FVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVV   74 (142)
T ss_dssp             CCEEEECC-S--HHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEE
T ss_pred             CeEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEE
Confidence            57899998 8  999999999997766  5666  566654333322221  1111112223 6776 88887664

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=90.49  E-value=0.19  Score=44.78  Aligned_cols=82  Identities=12%  Similarity=0.174  Sum_probs=59.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------c
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g  422 (529)
                      .++|.++|.-   .||+.+|+.|..-|.+|...++..     .+.+.      ....++++  ++++++++        =
T Consensus        42 gk~vgIiG~G---~IG~~va~~l~~~g~~v~~~d~~~-----~~~~~------~~~~~l~ell~~sDiv~~~~pl~~~t~  107 (181)
T d1qp8a1          42 GEKVAVLGLG---EIGTRVGKILAALGAQVRGFSRTP-----KEGPW------RFTNSLEEALREARAAVCALPLNKHTR  107 (181)
T ss_dssp             TCEEEEESCS---THHHHHHHHHHHTTCEEEEECSSC-----CCSSS------CCBSCSHHHHTTCSEEEECCCCSTTTT
T ss_pred             CceEEEeccc---cccccceeeeeccccccccccccc-----cccce------eeeechhhhhhccchhhcccccccccc
Confidence            4679999987   899999999999999999933221     11111      11336665  77777663        2


Q ss_pred             CcCChhhhhcCCCCceeecccc---cCcc
Q 009674          423 DDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       423 ~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                      ..++.+.+.+||+|+++|..+|   |+.+
T Consensus       108 ~li~~~~l~~mk~~ailIN~~RG~ivd~~  136 (181)
T d1qp8a1         108 GLVKYQHLALMAEDAVFVNVGRAEVLDRD  136 (181)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSCGGGBCHH
T ss_pred             cccccceeeeccccceEEeccccccccch
Confidence            4678899999999999999998   5554

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=90.32  E-value=0.15  Score=45.46  Aligned_cols=81  Identities=15%  Similarity=0.158  Sum_probs=56.6

Q ss_pred             HHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCccccccceeeeccccc-
Q 009674          341 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  413 (529)
Q Consensus       341 taavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-  413 (529)
                      |+..|++=+     +-.-++|+++|...  -+|+-++..|.++|-.|+. .++.                    .++++ 
T Consensus        20 Tp~aI~~lL~~y~i~l~GK~v~VIGrS~--~VG~Pla~lL~~~gatVt~~h~~t--------------------~~l~~~   77 (166)
T d1b0aa1          20 TPRGIVTLLERYNIDTFGLNAVVIGASN--IVGRPMSMELLLAGCTTTVTHRFT--------------------KNLRHH   77 (166)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHTTTCEEEEECSSC--------------------SCHHHH
T ss_pred             hHHHHHHHHHHcCcccccceEEEEeccc--cccHHHHHHHHHhhcccccccccc--------------------chhHHH
Confidence            555555544     34678999999997  9999999999999999999 2111                    12221 


Q ss_pred             -CcceEEEEc----CcCChhhhhcCCCCceeecccccCc
Q 009674          414 -HKTKIWLVG----DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       414 -~~~~vwivg----~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                       +++||+|++    ..++++..   ++|++++|+. +.+
T Consensus        78 ~~~ADivI~a~G~p~~i~~~~v---k~g~vvIDvG-i~~  112 (166)
T d1b0aa1          78 VENADLLIVAVGKPGFIPGDWI---KEGAIVIDVG-INR  112 (166)
T ss_dssp             HHHCSEEEECSCCTTCBCTTTS---CTTCEEEECC-CEE
T ss_pred             HhhhhHhhhhccCccccccccc---CCCcEEEecC-cee
Confidence             356777743    34565555   8999999987 554

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.05  E-value=0.24  Score=42.32  Aligned_cols=53  Identities=15%  Similarity=0.178  Sum_probs=40.8

Q ss_pred             hHHHHHHhcC-cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          340 LAAAVVVNSL-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       340 ltaavv~~~i-~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +||+-.++.. ++....|++.|+ |  -||..+++.+...|.+|..  ++++|++..++
T Consensus        14 ~Ta~~al~~~~~~~g~~VlV~Ga-G--~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~   69 (166)
T d1llua2          14 VTVYKGLKQTNARPGQWVAISGI-G--GLGHVAVQYARAMGLHVAAIDIDDAKLELARK   69 (166)
T ss_dssp             HHHHHHHHHHTCCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCEEEEeec-c--ccHHHHHHHHHHcCCccceecchhhHHHhhhc
Confidence            4566666554 345667888887 7  8999999988899999988  88888887654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=90.04  E-value=0.24  Score=42.91  Aligned_cols=66  Identities=20%  Similarity=0.226  Sum_probs=42.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcccc---ccce-e-eeccccc-CcceEEEE
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEA---QHNL-V-LSTSYAA-HKTKIWLV  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~---~~~l-~-~~~~~~~-~~~~vwiv  421 (529)
                      +++|.++|+ |  .||+++|..|.++++..+.   +++++.+.....+....   ..+. + ...++++ ++++++|+
T Consensus         3 ~~KI~IIGa-G--~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvi   77 (150)
T d1t2da1           3 KAKIVLVGS-G--MIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIV   77 (150)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEE
T ss_pred             CCeEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEE
Confidence            468999997 7  9999999988888877655   56666655444433211   1121 1 1225666 88888665

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.80  E-value=0.16  Score=48.24  Aligned_cols=29  Identities=17%  Similarity=0.240  Sum_probs=27.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      |-|+|+|+||  -||+.+++.|.++|.+|..
T Consensus         2 K~ILVTGatG--fIG~~lv~~Ll~~g~~V~~   30 (347)
T d1z45a2           2 KIVLVTGGAG--YIGSHTVVELIENGYDCVV   30 (347)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCcCeEEE
Confidence            4689999999  9999999999999999987

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=89.68  E-value=0.32  Score=42.22  Aligned_cols=56  Identities=13%  Similarity=0.130  Sum_probs=43.4

Q ss_pred             hHHHHHHhcCcC--CCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCcc
Q 009674          340 LAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV  399 (529)
Q Consensus       340 ltaavv~~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~  399 (529)
                      +||+-.++...+  .-+.|++.|| |  -||..+++.+...|. +|..  ++++|++..+ +++.
T Consensus        14 ~ta~~al~~~~~~~~G~~VlV~Ga-G--~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa   74 (182)
T d1vj0a2          14 ATAYHAFDEYPESFAGKTVVIQGA-G--PLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGA   74 (182)
T ss_dssp             HHHHHHHHTCSSCCBTCEEEEECC-S--HHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTC
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECC-C--ccchhheecccccccccccccccccccccccc-cccc
Confidence            577777766643  4578999997 7  899999999999997 6766  8888888664 4443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=89.60  E-value=0.29  Score=41.50  Aligned_cols=64  Identities=14%  Similarity=0.177  Sum_probs=39.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcc-----ccccceeeeccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV-----EAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~-----~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      +|.++|| |  .||+++|..|..++.  ++.|  .++++.+.....+..     .....+...+++++ ++++++|+
T Consensus         2 KI~IIGa-G--~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvi   75 (142)
T d1guza1           2 KITVIGA-G--NVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVII   75 (142)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEE
Confidence            5899997 8  999999999997764  5666  566655533322211     11122112236666 88877664

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=89.26  E-value=0.2  Score=46.48  Aligned_cols=33  Identities=24%  Similarity=0.310  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +.+.++|+||.|.+-||+|||+.|+++|-+|.+
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi   39 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILV   39 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEE
Confidence            467899999985224999999999999999999

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.09  E-value=0.15  Score=44.97  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=26.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT  384 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~l  384 (529)
                      .++|+++||||  -||+.+++.|.++|.  +|..
T Consensus         2 ~KkIlItGatG--~iG~~lv~~L~~~~~~~~v~~   33 (212)
T d2a35a1           2 PKRVLLAGATG--LTGEHLLDRILSEPTLAKVIA   33 (212)
T ss_dssp             CCEEEEECTTS--HHHHHHHHHHHHCTTCCEEEC
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEE
Confidence            36899999999  999999999998886  6666

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.02  E-value=0.18  Score=44.41  Aligned_cols=61  Identities=10%  Similarity=0.095  Sum_probs=47.4

Q ss_pred             hhHHHHHHhcC---cCC-CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCcccc
Q 009674          339 SLAAAVVVNSL---PKT-TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEA  401 (529)
Q Consensus       339 sltaavv~~~i---~~~-~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~  401 (529)
                      .+||+..+..+   .++ ...|++.||+|  -||+++++.....|.+++.   +++|+.++++++++...
T Consensus        13 glTA~~~l~~~~~~~~G~~etVLI~gaaG--gVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2          13 GLTSLIGVQEKGHISAGSNQTMVVSGAAG--ACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             HHHHHHHHHHHSCCCTTSCCEEEESSTTS--TTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             HHHHHHHHHHHhCCCCCCCCEEEEECCCc--hhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            68999988665   333 47899999998  9999999987778876443   67788888888877654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.93  E-value=0.36  Score=42.83  Aligned_cols=85  Identities=13%  Similarity=0.115  Sum_probs=57.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecch--hhHHHHHhhCccccccceeeeccccc--CcceEEEE------
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK--DDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  421 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~--~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  421 (529)
                      ..++|.++|.-   .||+++|+.|..-|.+|...++  ++-+.. +.       . ++..++++  +++|++++      
T Consensus        43 ~~k~vgiiG~G---~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-~~-------~-~~~~~l~ell~~sDiv~~~~Plt~  110 (184)
T d1ygya1          43 FGKTVGVVGLG---RIGQLVAQRIAAFGAYVVAYDPYVSPARAA-QL-------G-IELLSLDDLLARADFISVHLPKTP  110 (184)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECTTSCHHHHH-HH-------T-CEECCHHHHHHHCSEEEECCCCST
T ss_pred             cceeeeecccc---chhHHHHHHhhhccceEEeecCCCChhHHh-hc-------C-ceeccHHHHHhhCCEEEEcCCCCc
Confidence            35678888854   9999999999999999998222  111111 11       0 22335554  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674          422 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       422 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                        -..|+.+++.+|++|+++|-++|   |+.+
T Consensus       111 ~T~~lin~~~l~~mk~~a~lIN~sRG~iVde~  142 (184)
T d1ygya1         111 ETAGLIDKEALAKTKPGVIIVNAARGGLVDEA  142 (184)
T ss_dssp             TTTTCBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred             hhhhhhhHHHHhhhCCCceEEEecchhhhhhH
Confidence              13678899999999999999999   5554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=88.74  E-value=0.16  Score=45.18  Aligned_cols=41  Identities=12%  Similarity=0.121  Sum_probs=33.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +-++|.|+|+ |  -+|+.+|..+++.|++|.+  ++++.+++..+
T Consensus         3 ~I~~vaViGa-G--~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~   45 (186)
T d1wdka3           3 DVKQAAVLGA-G--IMGGGIAYQSASKGTPILMKDINEHGIEQGLA   45 (186)
T ss_dssp             CCSSEEEECC-H--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence            4467999999 4  9999999999999999999  77776665433

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.67  E-value=0.36  Score=42.91  Aligned_cols=82  Identities=20%  Similarity=0.191  Sum_probs=55.7

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-c--chhhHHHHHhhCccccccceeeeccc
Q 009674          340 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-I--CKDDYEKLKLRIPVEAQHNLVLSTSY  411 (529)
Q Consensus       340 ltaavv~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l-~--~~~~~~~l~~~~~~~~~~~l~~~~~~  411 (529)
                      =|+..|++=+     +-.-++|.++|...  -+|+-+|..|.++|-.|++ .  .++..+.+                  
T Consensus        21 cTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~------------------   80 (170)
T d1a4ia1          21 CTPKGCLELIKETGVPIAGRHAVVVGRSK--IVGAPMHDLLLWNNATVTTCHSKTAHLDEEV------------------   80 (170)
T ss_dssp             HHHHHHHHHHHTTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCSSHHHHH------------------
T ss_pred             ChHHHHHHHHHHhCcccccceEEEEecCC--ccchHHHHHHHhccCceEEEecccccHHHHH------------------
Confidence            3666666544     33678999999997  8999999999999999999 1  11111111                  


Q ss_pred             ccCcceEEEEc----CcCChhhhhcCCCCceeecccccCc
Q 009674          412 AAHKTKIWLVG----DDLTGKEQARAPKGTIFIPYTQIPP  447 (529)
Q Consensus       412 ~~~~~~vwivg----~~~~~~~q~~a~~G~~f~~~~~~~~  447 (529)
                        ++++++|++    +.++++..   ++|++++|+. +++
T Consensus        81 --~~aDivi~a~G~~~~i~~~~v---k~g~iviDvg-i~~  114 (170)
T d1a4ia1          81 --NKGDILVVATGQPEMVKGEWI---KPGAIVIDCG-INY  114 (170)
T ss_dssp             --TTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-CBC
T ss_pred             --hhccchhhccccccccccccc---cCCCeEeccC-ccc
Confidence              355666622    34555544   8999999987 443

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=88.46  E-value=0.65  Score=39.99  Aligned_cols=106  Identities=15%  Similarity=0.073  Sum_probs=66.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCc-cccccceeeecccc----c-Ccc-eEEE-EcC-
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-VEAQHNLVLSTSYA----A-HKT-KIWL-VGD-  423 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~-~~~~~~l~~~~~~~----~-~~~-~vwi-vg~-  423 (529)
                      +|-++|--   .+|.++|+.|.+.|.+|..  |++++.++|+++-. .....+.....+..    . .++ .+.+ +.+ 
T Consensus         3 kIGvIGlG---~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (178)
T d1pgja2           3 DVGVVGLG---VMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG   79 (178)
T ss_dssp             SEEEECCS---HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS
T ss_pred             EEEEEeeh---HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCc
Confidence            46677765   9999999999999999999  99999999988833 23222322111211    1 222 2222 111 


Q ss_pred             -cCC---hhhhhcCCCCceeecccccCccCC--------CCCceeecCCccc
Q 009674          424 -DLT---GKEQARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMI  463 (529)
Q Consensus       424 -~~~---~~~q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~  463 (529)
                       .++   .+......+|+++++.+..+|+..        .++..|.+.|..-
T Consensus        80 ~~~~~~~~~~~~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~ldapv~g  131 (178)
T d1pgja2          80 AATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISG  131 (178)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEES
T ss_pred             chhhhhhhhhhhhccccceecccCccchhHHHHHHHHHhhcceeEecccccC
Confidence             000   234446899999999998777622        2556666665543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.99  E-value=0.41  Score=41.11  Aligned_cols=28  Identities=25%  Similarity=0.341  Sum_probs=22.6

Q ss_pred             EEEEecccCchhhHHHHHHHHh-cc--CcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLC-QM--GIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~-~~--~~~v~l  384 (529)
                      +|.++|++|  .||+++|..|+ +.  +-++.|
T Consensus         2 KV~IiGaaG--~VG~~~a~~l~~~~~~~~el~L   32 (145)
T d2cmda1           2 KVAVLGAAG--GIGQALALLLKTQLPSGSELSL   32 (145)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHHSCTTCEEEE
T ss_pred             EEEEEcCCC--hHHHHHHHHHHhCCCCCcEEEE
Confidence            689999998  99999999987 43  345666

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=87.97  E-value=0.46  Score=40.54  Aligned_cols=54  Identities=11%  Similarity=0.113  Sum_probs=41.3

Q ss_pred             hHHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHh
Q 009674          340 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       340 ltaavv~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~  395 (529)
                      +||+-.++... +..+.|++.|++|  -+|..+++.+...| .+|..  ++++|.+.+++
T Consensus        14 ~Ta~~al~~~~~~~g~~vlV~G~~G--~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~   71 (170)
T d1jvba2          14 ITTYRAVRKASLDPTKTLLVVGAGG--GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR   71 (170)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEETTTS--HHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCEEEEEeccc--cceeeeeecccccccccccccccchhhHHHHHH
Confidence            45666666654 3456899999998  99999999999777 47766  78888887765

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.69  E-value=0.18  Score=48.64  Aligned_cols=29  Identities=21%  Similarity=0.169  Sum_probs=27.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+|+|+||  -||+++++.|.++|.+|..
T Consensus         2 ~kILVTGatG--fiG~~lv~~Ll~~g~~V~~   30 (393)
T d1i24a_           2 SRVMVIGGDG--YCGWATALHLSKKNYEVCI   30 (393)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            4799999999  9999999999999999985

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=87.61  E-value=0.19  Score=45.37  Aligned_cols=28  Identities=14%  Similarity=0.331  Sum_probs=26.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +|+|+||||  -||+.+++.|.++|.+|..
T Consensus         3 KIlItGasG--fiG~~l~~~L~~~g~~Vi~   30 (281)
T d1vl0a_           3 KILITGANG--QLGREIQKQLKGKNVEVIP   30 (281)
T ss_dssp             EEEEESTTS--HHHHHHHHHHTTSSEEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            589999999  9999999999999999988

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=87.58  E-value=0.38  Score=40.60  Aligned_cols=36  Identities=22%  Similarity=0.183  Sum_probs=29.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  391 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~  391 (529)
                      +..|++||..   .+|+.+++.|.++|.++++  .++|+..
T Consensus         3 knHiII~G~g---~~g~~l~~~L~~~~~~v~vId~d~~~~~   40 (153)
T d1id1a_           3 KDHFIVCGHS---ILAINTILQLNQRGQNVTVISNLPEDDI   40 (153)
T ss_dssp             CSCEEEECCS---HHHHHHHHHHHHTTCCEEEEECCCHHHH
T ss_pred             CCEEEEECCC---HHHHHHHHHHHHcCCCEEEEeccchhHH
Confidence            4579999996   9999999999999999888  5555443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.23  E-value=0.49  Score=40.61  Aligned_cols=53  Identities=11%  Similarity=-0.046  Sum_probs=40.7

Q ss_pred             hHHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 009674          340 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  395 (529)
Q Consensus       340 ltaavv~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~  395 (529)
                      +||+-.++... +..+.|++.|+ |  -||...++++...|.+|..  ++++|++..++
T Consensus        14 ~Ta~~al~~~~~~~g~~vlI~Ga-G--~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~   69 (168)
T d1piwa2          14 LTVYSPLVRNGCGPGKKVGIVGL-G--GIGSMGTLISKAMGAETYVISRSSRKREDAMK   69 (168)
T ss_dssp             HHHHHHHHHTTCSTTCEEEEECC-S--HHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred             HHHHHHHHHhCcCCCCEEEEECC-C--CcchhHHHHhhhccccccccccchhHHHHhhc
Confidence            46666655442 34568999997 7  8999999988889999887  88888887654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.99  E-value=0.52  Score=39.95  Aligned_cols=64  Identities=17%  Similarity=0.237  Sum_probs=39.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCcccc--ccce-eeeccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA--QHNL-VLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~~~--~~~l-~~~~~~~~-~~~~vwiv  421 (529)
                      +|.++|+ |  .||+++|..|+.++.  ++.|  .++++.+.....+....  .... +...++++ ++++++|+
T Consensus         2 KI~IIGa-G--~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvi   73 (140)
T d1a5za1           2 KIGIVGL-G--RVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIV   73 (140)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEE
Confidence            5889997 8  999999999996654  4555  66666654333322211  1111 12236766 88887664

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=86.71  E-value=0.42  Score=43.09  Aligned_cols=85  Identities=12%  Similarity=0.109  Sum_probs=58.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------c
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g  422 (529)
                      .++|.++|--   .||+.+|+.|.--|.+|...++.+-.....+  .      ....++++  ++++++++        -
T Consensus        43 gk~vgIiG~G---~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~--~------~~~~~l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          43 DQVVGVVGTG---HIGQVFMQIMEGFGAKVITYDIFRNPELEKK--G------YYVDSLDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCCHHHHHT--T------CBCSCHHHHHHHCSEEEECSCCCGGGT
T ss_pred             CCeEEEeccc---ccchhHHHhHhhhcccccccCcccccccccc--e------eeeccccccccccccccccCCcccccc
Confidence            5679999987   9999999999999999988322211111111  0      11334554  56666552        3


Q ss_pred             CcCChhhhhcCCCCceeecccc---cCcc
Q 009674          423 DDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       423 ~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                      ..++.+.+..||+|+++|-++|   |+.+
T Consensus       112 ~li~~~~l~~mk~~a~lIN~sRG~ivde~  140 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNVSRGPLVDTD  140 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSCGGGBCHH
T ss_pred             ccccHHHHhhhCCccEEEecCchhhhhhH
Confidence            4688889999999999999998   5554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=86.49  E-value=0.2  Score=47.11  Aligned_cols=28  Identities=21%  Similarity=0.243  Sum_probs=24.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC-cEEEe
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMG-IKVAT  384 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~-~~v~l  384 (529)
                      +|+++|+||  =||+++++.|+++| .+|..
T Consensus         2 KILITG~tG--fiG~~l~~~Ll~~g~~~V~~   30 (342)
T d2blla1           2 RVLILGVNG--FIGNHLTERLLREDHYEVYG   30 (342)
T ss_dssp             EEEEETCSS--HHHHHHHHHHHHSTTCEEEE
T ss_pred             EEEEECCCc--HHHHHHHHHHHHCCCCEEEE
Confidence            589999999  99999999999888 56665

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.29  E-value=0.53  Score=40.13  Aligned_cols=64  Identities=17%  Similarity=0.147  Sum_probs=39.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc-E-EEe--cchhhHHH----HHhhCc-cccccceeeeccccc-CcceEEEE
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGI-K-VAT--ICKDDYEK----LKLRIP-VEAQHNLVLSTSYAA-HKTKIWLV  421 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~-~-v~l--~~~~~~~~----l~~~~~-~~~~~~l~~~~~~~~-~~~~vwiv  421 (529)
                      +|.++|+ |  .||+++|..|..++. . +.|  .++++.+-    |+.-.. ..........+++++ ++++++|+
T Consensus         2 KI~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvi   75 (142)
T d1ojua1           2 KLGFVGA-G--RVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVV   75 (142)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEE
Confidence            5889997 8  999999999985554 3 444  56766543    322211 112122223347877 88888664

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.88  E-value=0.3  Score=46.35  Aligned_cols=31  Identities=19%  Similarity=0.212  Sum_probs=28.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ...+|+|+|++|  =||+.+++.|.++|.+|+.
T Consensus        14 ~nMKILVTGgsG--fIGs~lv~~L~~~g~~V~~   44 (363)
T d2c5aa1          14 ENLKISITGAGG--FIASHIARRLKHEGHYVIA   44 (363)
T ss_dssp             SCCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            456799999999  9999999999999999987

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.47  E-value=0.24  Score=46.68  Aligned_cols=29  Identities=17%  Similarity=0.226  Sum_probs=26.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      ++|+|+|+||  -||+++++.|.++|.+|+.
T Consensus         3 kKILITG~tG--fIGs~lv~~Ll~~g~~V~~   31 (346)
T d1ek6a_           3 EKVLVTGGAG--YIGSHTVLELLEAGYLPVV   31 (346)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHTTCCEEE
T ss_pred             CeEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            5899999999  9999999999999999864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=85.44  E-value=0.47  Score=42.43  Aligned_cols=86  Identities=8%  Similarity=0.106  Sum_probs=57.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecc--hhhHHHHHhhCccccccceeeeccccc--CcceEEEE-------
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  421 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~--~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  421 (529)
                      .++|-++|.-   .||+.+|+.|.--|.++...+  ...-+.-...       ..+...++++  +.++++++       
T Consensus        47 g~tvgIiG~G---~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~-------~~~~~~~l~~ll~~sD~v~l~~plt~~  116 (191)
T d1gdha1          47 NKTLGIYGFG---SIGQALAKRAQGFDMDIDYFDTHRASSSDEASY-------QATFHDSLDSLLSVSQFFSLNAPSTPE  116 (191)
T ss_dssp             TCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH-------TCEECSSHHHHHHHCSEEEECCCCCTT
T ss_pred             ccceEEeecc---cchHHHHHHHHhhccccccccccccccchhhcc-------cccccCCHHHHHhhCCeEEecCCCCch
Confidence            5678888887   999999999999999999822  2111111111       0011224544  55666553       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc---cCcc
Q 009674          422 -GDDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       422 -g~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                       -..|+.+++..||+|+.+|-++|   |+.+
T Consensus       117 T~~li~~~~l~~mk~~a~lIN~sRG~ivde~  147 (191)
T d1gdha1         117 TRYFFNKATIKSLPQGAIVVNTARGDLVDNE  147 (191)
T ss_dssp             TTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred             HhheecHHHhhCcCCccEEEecCCccchhhH
Confidence             24678899999999999999999   6644

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=85.10  E-value=0.56  Score=42.09  Aligned_cols=84  Identities=13%  Similarity=0.079  Sum_probs=57.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCccccccceeeeccccc--CcceEEEE--------c
Q 009674          353 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G  422 (529)
Q Consensus       353 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g  422 (529)
                      .++|.++|.-   .||+++|+.|.--|.+|...++..-        .+.... ....++++  +.++++++        -
T Consensus        45 ~ktvgIiG~G---~IG~~va~~l~~fg~~v~~~d~~~~--------~~~~~~-~~~~~l~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          45 QQTVGVMGTG---HIGQVAIKLFKGFGAKVIAYDPYPM--------KGDHPD-FDYVSLEDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCC--------SSCCTT-CEECCHHHHHHHCSEEEECCCCCGGGT
T ss_pred             ceeeeeeecc---cccccccccccccceeeeccCCccc--------hhhhcc-hhHHHHHHHHHhcccceeeeccccccc
Confidence            4678899987   9999999999999999988332110        011011 12334554  56666552        2


Q ss_pred             CcCChhhhhcCCCCceeecccc---cCcc
Q 009674          423 DDLTGKEQARAPKGTIFIPYTQ---IPPR  448 (529)
Q Consensus       423 ~~~~~~~q~~a~~G~~f~~~~~---~~~~  448 (529)
                      ..|+.+...+|++|+.+|-++|   |+.+
T Consensus       113 ~li~~~~l~~mk~~a~lIN~aRG~vvde~  141 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTARPNLIDTQ  141 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSCTTSBCHH
T ss_pred             ccccHHHhhccCCceEEEecccHhhhhhH
Confidence            3578889999999999999998   5544

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=84.51  E-value=0.57  Score=41.02  Aligned_cols=55  Identities=9%  Similarity=0.134  Sum_probs=39.4

Q ss_pred             ChhHHHHHHhcCcC--CCcEEEE-ecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 009674          338 SSLAAAVVVNSLPK--TTAHVLL-RGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  394 (529)
Q Consensus       338 nsltaavv~~~i~~--~~~~V~~-~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~  394 (529)
                      |-+||+..++..-+  .-.+|++ .|++|  -+|.++.+..-..|.+|..  ++++..++..
T Consensus        12 ~~~TA~~~l~~~~~~~~g~~vli~~ga~g--~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~   71 (189)
T d1gu7a2          12 NPLTAYLMLTHYVKLTPGKDWFIQNGGTS--AVGKYASQIGKLLNFNSISVIRDRPNLDEVV   71 (189)
T ss_dssp             HHHHHHHHHHSSSCCCTTTCEEEESCTTS--HHHHHHHHHHHHHTCEEEEEECCCTTHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEeCCCc--hHHHHHHHHHhhcCCeEEEEEecccccchHH
Confidence            56899988876632  2235666 58887  9999999987789999876  6655554443

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=83.42  E-value=0.65  Score=44.22  Aligned_cols=31  Identities=16%  Similarity=0.222  Sum_probs=25.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 009674          354 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  384 (529)
Q Consensus       354 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~l  384 (529)
                      +-.+++|+.+.+-||+|||+.|++.|.+|.+
T Consensus         3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i   33 (329)
T d1uh5a_           3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIF   33 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             cEEEEeCCCCCChHHHHHHHHHHHcCCEEEE
Confidence            4567779653125999999999999999999

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=82.83  E-value=0.6  Score=39.38  Aligned_cols=98  Identities=19%  Similarity=0.211  Sum_probs=56.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-Cccccccceeeeccccc--CcceEEE--EcC--cC
Q 009674          355 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DL  425 (529)
Q Consensus       355 ~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~  425 (529)
                      +|-++|. |  .+|+++|+.|.+.|.+++.  +++++-..++.+ ...        ..+.++  +++++++  |-+  ..
T Consensus         2 kIgiIG~-G--~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--------~~~~~e~~~~~diIi~~v~~~~~~   70 (152)
T d1i36a2           2 RVGFIGF-G--EVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGV--------TETSEEDVYSCPVVISAVTPGVAL   70 (152)
T ss_dssp             EEEEESC-S--HHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTC--------EECCHHHHHTSSEEEECSCGGGHH
T ss_pred             EEEEEcH-H--HHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccc--------cccHHHHHhhcCeEEEEecCchHH
Confidence            4778877 5  9999999999999999988  444444433333 111        112333  4555544  211  11


Q ss_pred             ChhhhhcCCCCceeecccccCccCC-----C-CCceeecCCccc
Q 009674          426 TGKEQARAPKGTIFIPYTQIPPRKL-----R-KDCFYHSTPAMI  463 (529)
Q Consensus       426 ~~~~q~~a~~G~~f~~~~~~~~~~~-----R-~dc~y~~~~a~~  463 (529)
                      +--++...-.|..+++.+-.+|...     + +..-|.+.|.|-
T Consensus        71 ~~~~~~~~~~~~~~id~st~~p~~~~~l~~~~~~~~~~d~~v~g  114 (152)
T d1i36a2          71 GAARRAGRHVRGIYVDINNISPETVRMASSLIEKGGFVDAAIMG  114 (152)
T ss_dssp             HHHHHHHTTCCSEEEECSCCCHHHHHHHHHHCSSSEEEEEEECS
T ss_pred             HHHHhhcccCCceeeccCcCCHHHHHHHHHHHhccCCCcccccC
Confidence            1122223345778999988777611     1 445566666553

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=82.65  E-value=0.96  Score=38.34  Aligned_cols=43  Identities=16%  Similarity=0.051  Sum_probs=35.8

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          351 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       351 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      +....|++.| .|  -||..+++.+...|.+|..  ++++|++..++-
T Consensus        25 ~~g~~vlV~G-~G--~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~   69 (170)
T d1e3ja2          25 QLGTTVLVIG-AG--PIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC   69 (170)
T ss_dssp             CTTCEEEEEC-CS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred             CCCCEEEEEc-cc--ccchhhHhhHhhhcccccccchHHHHHHHHHHc
Confidence            3456789998 57  8999999999999999888  899998877664

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=82.54  E-value=0.44  Score=39.98  Aligned_cols=39  Identities=13%  Similarity=0.032  Sum_probs=27.5

Q ss_pred             EecccCchhhHHHHHHHHhccCcEEE-e--cchhhHHHHHhhCccc
Q 009674          358 LRGTVTANKVANAVASSLCQMGIKVA-T--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       358 ~~Gatg~~kig~ava~~L~~~~~~v~-l--~~~~~~~~l~~~~~~~  400 (529)
                      ++|+-   ++|+++|+.|.+ +..+. +  |++++.++|+++....
T Consensus         4 fIG~G---~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~   45 (153)
T d2i76a2           4 FVGTG---TLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGK   45 (153)
T ss_dssp             EESCC---HHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCC
T ss_pred             EEeCc---HHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhccccc
Confidence            45554   999999999965 45543 4  9999999999886543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.40  E-value=0.91  Score=38.19  Aligned_cols=53  Identities=17%  Similarity=0.161  Sum_probs=38.5

Q ss_pred             HHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 009674          341 AAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  396 (529)
Q Consensus       341 taavv~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~  396 (529)
                      ||+-.++... +..+.|++.|+ |  .||.++++.+...|.+|..  ++++|++.+++.
T Consensus        15 Ta~~al~~~~~~~g~~vlv~G~-G--~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~   70 (168)
T d1rjwa2          15 TTYKALKVTGAKPGEWVAIYGI-G--GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL   70 (168)
T ss_dssp             HHHHHHHHHTCCTTCEEEEECC-S--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCEEEEeec-c--cchhhhhHHHhcCCCeEeccCCCHHHhhhhhhc
Confidence            4444444332 33557777776 7  8999999988899999877  889999888664

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=81.86  E-value=1.1  Score=38.45  Aligned_cols=53  Identities=17%  Similarity=0.172  Sum_probs=37.9

Q ss_pred             hHHH-HHHhcC-cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHh
Q 009674          340 LAAA-VVVNSL-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL  395 (529)
Q Consensus       340 ltaa-vv~~~i-~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~  395 (529)
                      +||+ ++++.. ++....|++.|+ |  -||.++++.+...|.++..   ++++|++..++
T Consensus        14 ~Ta~~a~~~~~~~~~g~~VlI~G~-G--~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~   71 (174)
T d1f8fa2          14 QTGAGACINALKVTPASSFVTWGA-G--AVGLSALLAAKVCGASIIIAVDIVESRLELAKQ   71 (174)
T ss_dssp             HHHHHHHHTTTCCCTTCEEEEESC-S--HHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCCEEEEeCC-C--HHHhhhhhcccccccceeeeeccHHHHHHHHHH
Confidence            4555 345544 455677999998 7  8999999988877776544   67778777654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.71  E-value=1.1  Score=38.12  Aligned_cols=87  Identities=15%  Similarity=0.163  Sum_probs=52.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCccccccceeeeccc-------cc---CcceE
Q 009674          352 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY-------AA---HKTKI  418 (529)
Q Consensus       352 ~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~~~~~l~~~~~~-------~~---~~~~v  418 (529)
                      ....|++.|+ |  -||...++.+...|. +|..  ++++|++..+ +++.+.-.+.- -.+.       ++   ..+++
T Consensus        26 ~gd~VlI~G~-G--~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~-~~~~~~~~~~~~~~~g~g~Dv  100 (171)
T d1pl8a2          26 LGHKVLVCGA-G--PIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQIS-KESPQEIARKVEGQLGCKPEV  100 (171)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEECS-SCCHHHHHHHHHHHHTSCCSE
T ss_pred             CCCEEEEECC-C--ccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCccccccc-ccccccccccccccCCCCceE
Confidence            4568999998 7  999999999998888 6777  8888888654 55443311100 0011       11   23456


Q ss_pred             EE--EcCcCC-hhhhhcCCCCceeeccc
Q 009674          419 WL--VGDDLT-GKEQARAPKGTIFIPYT  443 (529)
Q Consensus       419 wi--vg~~~~-~~~q~~a~~G~~f~~~~  443 (529)
                      +|  +|..-. +.-+..+.+|-.++-+.
T Consensus       101 vid~~G~~~~~~~a~~~~~~gG~iv~~G  128 (171)
T d1pl8a2         101 TIECTGAEASIQAGIYATRSGGTLVLVG  128 (171)
T ss_dssp             EEECSCCHHHHHHHHHHSCTTCEEEECS
T ss_pred             EEeccCCchhHHHHHHHhcCCCEEEEEe
Confidence            55  444322 22244566776666666

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=81.30  E-value=0.7  Score=41.59  Aligned_cols=27  Identities=15%  Similarity=0.396  Sum_probs=24.1

Q ss_pred             EEEecccCchhhHHHHHHHHhccCc-EEEe
Q 009674          356 VLLRGTVTANKVANAVASSLCQMGI-KVAT  384 (529)
Q Consensus       356 V~~~Gatg~~kig~ava~~L~~~~~-~v~l  384 (529)
                      |+++|++|  =||+.+++.|.++|. +|+.
T Consensus         2 ILITGgsG--fIGs~lv~~L~~~g~~~V~~   29 (307)
T d1eq2a_           2 IIVTGGAG--FIGSNIVKALNDKGITDILV   29 (307)
T ss_dssp             EEEETTTS--HHHHHHHHHHHTTTCCCEEE
T ss_pred             EEEecCcc--HHHHHHHHHHHhCCCCeEEE
Confidence            78999999  999999999999996 5654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=80.96  E-value=1.6  Score=36.98  Aligned_cols=57  Identities=11%  Similarity=0.072  Sum_probs=40.5

Q ss_pred             hHHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCccc
Q 009674          340 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  400 (529)
Q Consensus       340 ltaavv~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~  400 (529)
                      +||+-.++... +..+.|++.|+ |  -||...++.+...|.++..  +++++.+.. ++++.+
T Consensus        17 ~Tay~al~~~~~~~G~~VlI~Ga-G--~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~lGad   76 (168)
T d1uufa2          17 ITTYSPLRHWQAGPGKKVGVVGI-G--GLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGAD   76 (168)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCS
T ss_pred             HHHHHHHHHhCCCCCCEEEEecc-c--hHHHHHHHHhhcccccchhhccchhHHHHH-hccCCc
Confidence            46666666553 34668999997 7  7999999988888988777  677777654 344443