Citrus Sinensis ID: 009690

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
MKGPQIKNNKNPRFAFVKQQQQQHCLLILISIFINVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQLEEQRNSNPSLVASS
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccHHHHHHHHHcccccccccccccccccc
cccccHcccccccHHHHHcccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcEcEcccccccccccccEccccEcccccEccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHHccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccEccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccEccccccHHHHcccccccccccccEcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccc
mkgpqiknnknprfaFVKQQQQQHCLLILISIFINVSAAATATAFDYADALSKSLLYFEAqrsgrlpynqrvtwrdhsgltdgleqGVDLvggyydagdqvkfglPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYfikahtspnvlwaevgdgdtdhycwqrpedmttsrhaykidennpgsdlaGETAAAMAAASIVfkktnphysHLLLHHAQQLFEfgdkfrgkydESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSClnknngsnvdrtrggllyirpwnnmqYVSTAAFLLTIYSDLlldsnqplncngeivGHQEILSFAKSQVDYilgsnpmnmsylvgygpkyptrvhhrgasivsyrenkgfigctqgydnwysrvdqnpnVIVGALvggpdwrdnfMDQRNNymqteactyntapLVGVFAKLSQLeeqrnsnpslvass
mkgpqiknnknprFAFVKQQQQQHCLLILISIFINVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLnknngsnvdrTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSqleeqrnsnpslvass
MKGPQIKNNKNPRFAFVKqqqqqHCLLILISIFINVSaaatatafdyadaLSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETaaamaaaSIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQLEEQRNSNPSLVASS
*************FAFVKQQQQQHCLLILISIFINVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQR***************************AAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKL*****************
******************QQQQQHCLLILISIFINVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAK******************
MKGPQIKNNKNPRFAFVKQQQQQHCLLILISIFINVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQL**************
*****IKNNKNPRFAFVKQQQQQHCLLILISIFINVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQLE*************
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKGPQIKNNKNPRFAFVKQQQQQHCLLILISIFINVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQLEEQRNSNPSLVASS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query528 2.2.26 [Sep-21-2011]
O48766525 Endoglucanase 11 OS=Arabi yes no 0.931 0.937 0.740 0.0
Q6Z5P2531 Endoglucanase 7 OS=Oryza yes no 0.918 0.913 0.686 0.0
Q6H3Z9556 Endoglucanase 22 OS=Oryza no no 0.888 0.843 0.696 0.0
Q67UW5534 Endoglucanase 5 OS=Oryza no no 0.878 0.868 0.691 0.0
Q654U4538 Endoglucanase 16 OS=Oryza no no 0.893 0.877 0.672 0.0
Q84Q51529 Endoglucanase 21 OS=Oryza no no 0.939 0.937 0.630 0.0
Q5NAT0 640 Endoglucanase 2 OS=Oryza no no 0.918 0.757 0.588 1e-170
Q42059 620 Endoglucanase 6 OS=Arabid no no 0.880 0.75 0.612 1e-170
Q8L7I0 626 Endoglucanase 19 OS=Arabi no no 0.884 0.746 0.603 1e-168
Q5NAT8 640 Endoglucanase 1 OS=Oryza no no 0.905 0.746 0.571 1e-162
>sp|O48766|GUN11_ARATH Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1 Back     alignment and function desciption
 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/498 (74%), Positives = 426/498 (85%), Gaps = 6/498 (1%)

Query: 18  KQQQQQHCLLILISIFI----NVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQRVT 73
           + +Q    LL+LI++F      VS+      FDY +ALSKSLLYFEAQRSGRLPYNQRVT
Sbjct: 7   RHKQCHFLLLLLITVFSAALDGVSSETDVGGFDYGEALSKSLLYFEAQRSGRLPYNQRVT 66

Query: 74  WRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEH 133
           WRDHSGLTDGLEQGVDLVGGY+DAGD VKFGLPMAFTVTMLSW VIE+ + +A+ GEL H
Sbjct: 67  WRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSH 126

Query: 134 AFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDL 193
           A EAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSR A+KIDENNPGSD+
Sbjct: 127 ALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDI 186

Query: 194 AGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSG 253
           AGETAAAMAAASIVF+ TNPHYSHLLLHHAQQLFEFGDK+RGKYDES++ VKSYYASVSG
Sbjct: 187 AGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSYYASVSG 246

Query: 254 YMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLA 313
           YMDELLWGA WL +ATDN+ Y+ YV++ A   GG+ WA++EFSWDVK+AG+Q++AS LL 
Sbjct: 247 YMDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKFAGVQLLASMLLK 306

Query: 314 KEQHKKQYGYILEQYRLKAEYYICSCLNKN-NGSNVDRTRGGLLYIRPWNNMQYVSTAAF 372
           +E+H KQ+  +L+QY+ KA++Y+CS LNKN NG+NV RT  GLLY+R WNNMQYVSTA+F
Sbjct: 307 EEKH-KQHSKVLQQYKSKADHYLCSILNKNINGTNVQRTPAGLLYVRQWNNMQYVSTASF 365

Query: 373 LLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTR 432
           LLT+YSD L  SN  L C+   V   E+L FAKSQ+DYILGSNPM  SYLVGYGPKYP R
Sbjct: 366 LLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYLVGYGPKYPIR 425

Query: 433 VHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYM 492
           VHHRGASI S++E+KGFIGCTQGYDNWY R + NP+V+VGALVGGPD +D+F D+R NY+
Sbjct: 426 VHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDHQDDFDDRRGNYV 485

Query: 493 QTEACTYNTAPLVGVFAK 510
           QTEACTYNTAPLVGVFA+
Sbjct: 486 QTEACTYNTAPLVGVFAR 503

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q6Z5P2|GUN7_ORYSJ Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1 Back     alignment and function description
>sp|Q6H3Z9|GUN22_ORYSJ Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2 Back     alignment and function description
>sp|Q67UW5|GUN5_ORYSJ Endoglucanase 5 OS=Oryza sativa subsp. japonica GN=Os02g0151300 PE=2 SV=1 Back     alignment and function description
>sp|Q654U4|GUN16_ORYSJ Endoglucanase 16 OS=Oryza sativa subsp. japonica GN=Os06g0247900 PE=2 SV=2 Back     alignment and function description
>sp|Q84Q51|GUN21_ORYSJ Endoglucanase 21 OS=Oryza sativa subsp. japonica GN=GLU9 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT0|GUN2_ORYSJ Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1 Back     alignment and function description
>sp|Q42059|GUN6_ARATH Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2 Back     alignment and function description
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT8|GUN1_ORYSJ Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
347466583528 endo-1,4-beta-glucanase [Populus trichoc 0.960 0.960 0.809 0.0
224131672526 glycosyl hydrolase family 9 [Populus tri 0.960 0.963 0.809 0.0
429326606528 korrigan [Populus tomentosa] 0.960 0.960 0.809 0.0
255568709527 endo-1,4-beta-glucanase, putative [Ricin 0.967 0.969 0.793 0.0
357493259517 Endoglucanase [Medicago truncatula] gi|3 0.948 0.969 0.785 0.0
388501862517 unknown [Medicago truncatula] 0.948 0.969 0.781 0.0
359485512521 PREDICTED: endoglucanase 11-like [Vitis 0.920 0.932 0.812 0.0
357462217525 Endoglucanase [Medicago truncatula] gi|3 0.965 0.971 0.775 0.0
356501281524 PREDICTED: endoglucanase 11-like [Glycin 0.950 0.958 0.792 0.0
449481156538 PREDICTED: endoglucanase 11-like [Cucumi 0.893 0.877 0.803 0.0
>gi|347466583|gb|AEO97204.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466637|gb|AEO97231.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  853 bits (2203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/519 (80%), Positives = 456/519 (87%), Gaps = 12/519 (2%)

Query: 12  PRFAFVKQQQQQHCLLILISIFINVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQR 71
           P F F KQ       ++LISIF  ++   T  A DY DAL KSLLYFE+QRSGRLPYNQR
Sbjct: 18  PTFRFAKQWA-----VLLISIFPILN---TGLAVDYGDALKKSLLYFESQRSGRLPYNQR 69

Query: 72  VTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGEL 131
           VTWR HSGLTDGLEQGVDLVGGYYDAGD VKFGLPMAFTVTMLSW VIEF+ QIA AGEL
Sbjct: 70  VTWRHHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWTVIEFQHQIAVAGEL 129

Query: 132 EHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGS 191
           EHA EAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSR AY+IDENNPGS
Sbjct: 130 EHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRQAYRIDENNPGS 189

Query: 192 DLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASV 251
           DLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDK+RGKYDE++  VKSYYASV
Sbjct: 190 DLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKYRGKYDENMGVVKSYYASV 249

Query: 252 SGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKL 311
           SGY DELLWGA+WL KATDN+KYL+YVINNA  FGG GWA+ EFSWDVKYAGLQ+MA+KL
Sbjct: 250 SGYKDELLWGALWLYKATDNEKYLEYVINNAHCFGGTGWAMEEFSWDVKYAGLQIMAAKL 309

Query: 312 LAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAA 371
           L +E+H +++G  LEQYR KAE+Y+CSCLNKNNG+NV+RT GGLL+IR WNNMQYVSTAA
Sbjct: 310 LVEEKH-REHGDTLEQYRSKAEHYLCSCLNKNNGTNVNRTPGGLLHIRQWNNMQYVSTAA 368

Query: 372 FLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPT 431
           FLLT+YSD LL+SNQ L C+G  V H+EIL FAKSQVDYILGSNPMNMSYLVGYGPKYP 
Sbjct: 369 FLLTVYSDFLLNSNQKLKCHGGSVDHEEILGFAKSQVDYILGSNPMNMSYLVGYGPKYPA 428

Query: 432 RVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNY 491
           RVHHRGASIVSYRENKGFIGCTQGYDNWY R + NPNV+VGALVGGPD +DNF DQR+NY
Sbjct: 429 RVHHRGASIVSYRENKGFIGCTQGYDNWYGREEPNPNVLVGALVGGPDCQDNFTDQRSNY 488

Query: 492 MQTEACTYNTAPLVGVFAKLSQLEEQR---NSNPSLVAS 527
           MQTEACTYNTAPLVGVFAKL Q+E Q+   N N  LVAS
Sbjct: 489 MQTEACTYNTAPLVGVFAKLLQMEGQKSHDNHNQPLVAS 527

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224131672|ref|XP_002321149.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|222861922|gb|EEE99464.1| glycosyl hydrolase family 9 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|429326606|gb|AFZ78643.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|255568709|ref|XP_002525326.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223535385|gb|EEF37059.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357493259|ref|XP_003616918.1| Endoglucanase [Medicago truncatula] gi|355518253|gb|AES99876.1| Endoglucanase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388501862|gb|AFK38997.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|359485512|ref|XP_002271094.2| PREDICTED: endoglucanase 11-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357462217|ref|XP_003601390.1| Endoglucanase [Medicago truncatula] gi|355490438|gb|AES71641.1| Endoglucanase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356501281|ref|XP_003519454.1| PREDICTED: endoglucanase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|449481156|ref|XP_004156098.1| PREDICTED: endoglucanase 11-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.948 0.954 0.719 1.1e-204
TAIR|locus:2014205 620 GH9C2 "glycosyl hydrolase 9C2" 0.871 0.741 0.597 4.4e-155
TAIR|locus:2136073 626 GH9C3 "glycosyl hydrolase 9C3" 0.869 0.733 0.592 1.9e-154
TAIR|locus:2028441 627 GH9C1 "glycosyl hydrolase 9C1" 0.910 0.767 0.549 3e-149
TAIR|locus:2042441490 GH9B10 "glycosyl hydrolase 9B1 0.901 0.971 0.493 1.2e-122
TAIR|locus:2042451491 GH9B11 "glycosyl hydrolase 9B1 0.899 0.967 0.487 3.1e-122
TAIR|locus:2042376491 GH9B9 "glycosyl hydrolase 9B9" 0.903 0.971 0.485 1.7e-121
TAIR|locus:2042461492 GH9B12 "glycosyl hydrolase 9B1 0.903 0.969 0.458 9.8e-119
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.856 0.902 0.482 9.4e-114
TAIR|locus:2137824516 GH9B13 "glycosyl hydrolase 9B1 0.852 0.872 0.476 5.2e-113
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1980 (702.1 bits), Expect = 1.1e-204, P = 1.1e-204
 Identities = 366/509 (71%), Positives = 423/509 (83%)

Query:    26 LLILISIFI----NVSXXXXXXXXXXXXXLSKSLLYFEAQRSGRLPYNQRVTWRDHSGLT 81
             LL+LI++F      VS             LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLT
Sbjct:    15 LLLLITVFSAALDGVSSETDVGGFDYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLT 74

Query:    82 DGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 141
             DGLEQGVDLVGGY+DAGD VKFGLPMAFTVTMLSW VIE+ + +A+ GEL HA EAIKWG
Sbjct:    75 DGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWG 134

Query:   142 TDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETXXXX 201
             TDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSR A+KIDENNPGSD+AGET    
Sbjct:   135 TDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDIAGETAAAM 194

Query:   202 XXXSIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWG 261
                SIVF+ TNPHYSHLLLHHAQQLFEFGDK+RGKYDES++ VKSYYASVSGYMDELLWG
Sbjct:   195 AAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSYYASVSGYMDELLWG 254

Query:   262 AMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQY 321
             A WL +ATDN+ Y+ YV++ A   GG+ WA++EFSWDVK+AG+Q++AS LL +E+HK Q+
Sbjct:   255 ATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKFAGVQLLASMLLKEEKHK-QH 313

Query:   322 GYILEQYRLKAEYYICSCLNKN-NGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDL 380
               +L+QY+ KA++Y+CS LNKN NG+NV RT  GLLY+R WNNMQYVSTA+FLLT+YSD 
Sbjct:   314 SKVLQQYKSKADHYLCSILNKNINGTNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDH 373

Query:   381 LLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASI 440
             L  SN  L C+   V   E+L FAKSQ+DYILGSNPM  SYLVGYGPKYP RVHHRGASI
Sbjct:   374 LRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYLVGYGPKYPIRVHHRGASI 433

Query:   441 VSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYN 500
              S++E+KGFIGCTQGYDNWY R + NP+V+VGALVGGPD +D+F D+R NY+QTEACTYN
Sbjct:   434 ASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDHQDDFDDRRGNYVQTEACTYN 493

Query:   501 TAPLVGVFAKLSQLEEQR--NSNPSLVAS 527
             TAPLVGVFA+L +LEEQ+    + SLVA+
Sbjct:   494 TAPLVGVFARLIELEEQKLEEEDVSLVAT 522
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028441 GH9C1 "glycosyl hydrolase 9C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042441 GH9B10 "glycosyl hydrolase 9B10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042451 GH9B11 "glycosyl hydrolase 9B11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042376 GH9B9 "glycosyl hydrolase 9B9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042461 GH9B12 "glycosyl hydrolase 9B12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6Z5P2GUN7_ORYSJ3, ., 2, ., 1, ., 40.68630.91850.9133yesno
O48766GUN11_ARATH3, ., 2, ., 1, ., 40.74090.93180.9371yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
PLN02420525 PLN02420, PLN02420, endoglucanase 0.0
PLN02171 629 PLN02171, PLN02171, endoglucanase 0.0
PLN02340 614 PLN02340, PLN02340, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN00119489 PLN00119, PLN00119, endoglucanase 0.0
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN02345469 PLN02345, PLN02345, endoglucanase 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
PLN02308492 PLN02308, PLN02308, endoglucanase 1e-172
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-172
PLN03009495 PLN03009, PLN03009, cellulase 1e-160
PLN02175484 PLN02175, PLN02175, endoglucanase 1e-145
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information 
 Score =  930 bits (2406), Expect = 0.0
 Identities = 381/520 (73%), Positives = 439/520 (84%), Gaps = 11/520 (2%)

Query: 18  KQQQQQHCLLILISIFINVSAA-------ATATAFDYADALSKSLLYFEAQRSGRLPYNQ 70
            + +  H LL+L+ +    SAA            FDY +ALSKSLLYFEAQRSGRLPYNQ
Sbjct: 6   HRHKPCHFLLLLLLLITVFSAALAGVSSETDVGRFDYGEALSKSLLYFEAQRSGRLPYNQ 65

Query: 71  RVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFREQIAAAGE 130
           RVTWRDHSGLTDGLEQGVDLVGGY+DAGD VKFGLPMAFTVTMLSW VIE+ +Q+A+ GE
Sbjct: 66  RVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDQLASTGE 125

Query: 131 LEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPG 190
           L HA EAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSR A+KIDENNPG
Sbjct: 126 LSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPG 185

Query: 191 SDLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYAS 250
           SD+AGETAAAMAAASIVF+ TNPHYSHLLLHHAQQLFEFGDK+RGKYDES++ VKSYYAS
Sbjct: 186 SDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSYYAS 245

Query: 251 VSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASK 310
           VSGYMDELLWGA WL +ATDN+ Y+ YV++ A   GG+ WA++EFSWDVKYAG+Q++AS 
Sbjct: 246 VSGYMDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKYAGVQLLASM 305

Query: 311 LLAKEQHKKQYGYILEQYRLKAEYYICSCLNKN-NGSNVDRTRGGLLYIRPWNNMQYVST 369
           LL +E+H KQ+  +L+QY+ KA++Y+CS LNKN NG+NV RT  GLLY+R WNNMQYVST
Sbjct: 306 LLKEEKH-KQHSKVLQQYKSKADHYLCSILNKNINGTNVQRTPAGLLYVRQWNNMQYVST 364

Query: 370 AAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKY 429
           A+FLLT+YSD L  SN  L C+   V   E+L FAKSQ+DYILGSNPM  SYLVGYGPKY
Sbjct: 365 ASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYLVGYGPKY 424

Query: 430 PTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRN 489
           PTRVHHRGASI S++E+KGFIGCTQGYDNWY R + NP+V+VGALVGGPD +DNF D+R 
Sbjct: 425 PTRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDCQDNFDDRRG 484

Query: 490 NYMQTEACTYNTAPLVGVFAKLSQLEEQR--NSNPSLVAS 527
           NY+QTEACTYNTAPLVGVFA+L +LEEQ+    + SLVA+
Sbjct: 485 NYVQTEACTYNTAPLVGVFARLIELEEQKLEEEDVSLVAT 524

Length = 525
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 528
PLN02340 614 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN03009495 cellulase 100.0
PLN02345469 endoglucanase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.98
COG1331667 Highly conserved protein containing a thioredoxin 96.3
KOG2787403 consensus Lanthionine synthetase C-like protein 1 95.41
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 94.66
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 94.23
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 92.75
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 87.93
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 81.01
>PLN02340 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=1.5e-124  Score=1021.18  Aligned_cols=486  Identities=61%  Similarity=1.084  Sum_probs=449.9

Q ss_pred             HHHHHHHHHhhcccccchHHHHHHHHHHHHhhHHhcCCCCCCCCCCCCCCCCCCCCCCCCCcccccccccCCCCcccccc
Q 009690           27 LILISIFINVSAAATATAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLP  106 (528)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~f~~~QR~G~lp~~~~~~w~~~s~l~Dg~~~~~dlsGGW~DAGD~~Ky~~~  106 (528)
                      ++++...+++++.++...++|.++|++||+||++||||+||+++|++||++|++.||.+.++||+|||||||||+||++|
T Consensus        11 ~~~~~~~~~~~~~~~~~~~nY~~aL~~Sl~Fy~aQRsG~Lp~~~~~~WR~ds~l~Dg~~~~~DlsGGwyDAGD~vKf~~p   90 (614)
T PLN02340         11 AALLLLVLAAAASAAAEAFNYGGALDKTLLFFEAQRSGKLPANQRVKWRGDSGLKDGFLQGVDLVGGYYDAGDHVKFGLP   90 (614)
T ss_pred             HHHHHHHHHhhhccccCCCcHHHHHHHHHHHHHHhcCcCCCccCCCcccccccCCCcccccCCCCCCceeCCCcceecch
Confidence            44555566778888889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhHHHHHhcCChhHHHHHHHHHHHHHHhccCCCCeEEEEeCCCCCCCCCCCCCCCCCcccceeecCC
Q 009690          107 MAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDE  186 (528)
Q Consensus       107 ~a~s~~~L~~~~~ef~d~~es~~~~pdlLde~kwg~D~llk~~~~~g~~y~qVg~~~~dh~~w~~Pe~~~~~R~~~~~~~  186 (528)
                      +|+|+++|+|+++||++.++++|++||+|||||||+|||||||+.+++||+||||+..||.+|.+||+|+.+|++|.++.
T Consensus        91 ~a~t~t~L~w~~~ef~~~~~~~~~~~~~ldeirw~~Dyllk~~~~~~~~~~qVGdg~~DH~~W~~PE~~~~~R~~y~i~~  170 (614)
T PLN02340         91 MAFAVTMLSWGAVDFRKEITALNQMQRTLWAIRWGTDYFIKAHTQPNVLWGQVGDGDSDHYCWERAEDMTTPRTAYKLDQ  170 (614)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCcccccCCChhhcCCcCceeecCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhHHHHHHHHHHHHchhhccCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccccCCCccccHHHHHHHHHH
Q 009690          187 NNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLS  266 (528)
Q Consensus       187 ~~pgt~~~~~~AAalA~as~vf~~~d~~~A~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~s~~~~~De~~wAAaeLy  266 (528)
                      ++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.++++...++|+| +++.||++|||+|||
T Consensus       171 ~~pgSd~a~e~AAAlAaas~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~s~~~a~~~Y~s-s~~~DEl~WAAawLy  249 (614)
T PLN02340        171 NHPGSDLAGETAAALAAASKAFKPYNSSYSDLLLVHAKQLFSFADKFRGLYDDSIQNAKKFYTS-SGYSDELLWAAAWLY  249 (614)
T ss_pred             CCCccHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCccccCCCC-CCcchHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998776677789999 999999999999999


Q ss_pred             HHcCChHHHHHHHHhhhhcCCCCCCcccccccchhHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 009690          267 KATDNDKYLQYVINNADNFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGS  346 (528)
Q Consensus       267 ~aTg~~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~l~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~  346 (528)
                      ++|||++|++++..+...++...|....|+||++.+|+++|+++++.+.... .....++.+++.+|.|+|.++.+++..
T Consensus       250 ~ATgd~~Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~g~~~lla~~~~~~~~~-~~~~~~~~~~~~ad~~~~~~~~~~~g~  328 (614)
T PLN02340        250 RATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGG-AYTSTLKQYQAKADYFACACLQKNGGY  328 (614)
T ss_pred             HHhCCHHHHHHHHHHHHhcccccccCCcCCccchhhHHHHHHHHHhhcCCcc-hhHHHHHHHHHHHHHHHHhhhccCCCC
Confidence            9999999999998876555555566668999999999999998776543221 122345679999999998777776666


Q ss_pred             ccccCCCCceeecCCCcHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCccCHHHHHHHHHhchhhhcCCCCCCcceEeeeC
Q 009690          347 NVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYG  426 (528)
Q Consensus       347 ~~~~t~~G~~~~~~wgs~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~NP~~~SyVtG~G  426 (528)
                      ++.+||+|++|+..|||+||+++++||+++|++++..+..++.|+....+..+|+++|++|||||||+||+++|||||||
T Consensus       329 ~v~~TpgGl~~~~~Wgn~rya~~aafl~~vyad~l~~~~~~~~c~~~~~~~~~y~~fA~sQidYiLG~NP~~~SYVVGyG  408 (614)
T PLN02340        329 NIQLTPGGLMYVREWNNLQYASSAAFLLAVYSDYLSAANAKLRCPDGLVQPQELLDFARSQADYILGKNPKGMSYMVGYG  408 (614)
T ss_pred             ccccCCCceEEeCCCChHHHHHHHHHHHHHHHHHhhhcccccccCccccCHHHHHHHHHHhhHhhcCCCCCCCceEeccC
Confidence            78999999999999999999999999999999999877777888776778999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccccccccCCCccccCCCCcccccCCCCCCCccccccccCCCCCCCCcccCCccccccccccCcchHHH
Q 009690          427 PKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVG  506 (528)
Q Consensus       427 ~~~p~~pHHR~s~~~~~~~~~~~~~~~~g~~~~~~~~~~n~~~~~GaLVGGPn~~~~y~D~~~~y~~nEvaid~NA~lv~  506 (528)
                      .|+|+|||||.|+|+++..++.+++|.+|+++|++++.+||++|+|+||||||..|+|.|+|++|++||||||||||||+
T Consensus       409 ~n~P~~pHHR~as~~~~~~~~~~v~c~~g~~~~~~~~~~np~vL~GALVGGPd~~D~y~D~r~~y~~nEvAidyNAplvg  488 (614)
T PLN02340        409 PKYPIHVHHRGSSIPSIFALHSTVGCVQGFDSWYRRKEADPNVIYGALVGGPDANDNFSDDRSNYEQTEPTLSGNAPLVG  488 (614)
T ss_pred             CCCCCccccccccCCccccccccccCcccccccccCCCCCCCCCCCceeeCCCCCCCCCccccccccccceeehhHHHHH
Confidence            99999999999999988888888999999989999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhh
Q 009690          507 VFAKLSQL  514 (528)
Q Consensus       507 ~la~l~~~  514 (528)
                      +||+|...
T Consensus       489 ~lA~L~~~  496 (614)
T PLN02340        489 LFAKLQSA  496 (614)
T ss_pred             HHHHHHhc
Confidence            99999984

>PLN02420 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 2e-96
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 4e-84
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 1e-75
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 8e-71
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 4e-66
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 5e-66
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 9e-61
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 4e-49
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 3e-04
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  349 bits (896), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 194/464 (41%), Positives = 270/464 (58%), Gaps = 41/464 (8%)
Query: 51  LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFT 110
           L  SLL++EAQRSGRLP +Q+VTWR  S L D  +QG DL GGY+DAGD VKFG PMA+T
Sbjct: 9   LRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYT 68
Query: 111 VTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQ 170
            T+L+WG+I+F    ++AG L+   +A+KW TDYFIKAHTS N  + +VG GD DH  W 
Sbjct: 69  ATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWG 128
Query: 171 RPEDMTTSRHAYKIDENNPGSDLAGETXXXXXXXSIVFKKTNPHYSHLLLHHAQQLFEFG 230
           RPEDMT +R AYKID + PGSDLAGET       SIVF+  +  YS+ LL HA+QLF+F 
Sbjct: 129 RPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFA 188
Query: 231 DKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNADNFGGIGW 290
           + +RGKY +S+   +++YAS   Y DEL+W A WL +AT+++ YL    +  D FG   W
Sbjct: 189 NNYRGKYSDSITDARNFYASAD-YRDELVWAAAWLYRATNDNTYLNTAESLYDEFGLQNW 247
Query: 291 AITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDR 350
                +WD K +G+QV+ +KL  K+ +K              + Y+   +N     N  +
Sbjct: 248 G-GGLNWDSKVSGVQVLLAKLTNKQAYKD-----------TVQSYVNYLIN-----NQQK 290
Query: 351 TRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDY 410
           T  GLLYI  W  +++ + AAF++   ++L L ++                 FA++Q+DY
Sbjct: 291 TPKGLLYIDMWGTLRHAANAAFIMLEAAELGLSAS-------------SYRQFAQTQIDY 337
Query: 411 ILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVI 470
            LG      S++ G+G   PTR HHR +S         +        N ++  D N +V+
Sbjct: 338 ALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPAPATCDW--------NTFNSPDPNYHVL 387
Query: 471 VGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQL 514
            GALVGGPD  DN++D R++Y+  E  T   A      A L  L
Sbjct: 388 SGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 0.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 0.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-178
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-177
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-174
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-171
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-155
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-149
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-138
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 4e-85
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
 Score =  522 bits (1347), Expect = 0.0
 Identities = 202/471 (42%), Positives = 280/471 (59%), Gaps = 41/471 (8%)

Query: 44  AFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKF 103
           A+DY   L  SLL++EAQRSGRLP +Q+VTWR  S L D  +QG DL GGY+DAGD VKF
Sbjct: 2   AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKF 61

Query: 104 GLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGD 163
           G PMA+T T+L+WG+I+F    ++AG L+   +A+KW TDYFIKAHTS N  + +VG GD
Sbjct: 62  GFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGD 121

Query: 164 TDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHA 223
            DH  W RPEDMT +R AYKID + PGSDLAGETAAA+AAASIVF+  +  YS+ LL HA
Sbjct: 122 ADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHA 181

Query: 224 QQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNAD 283
           +QLF+F + +RGKY +S+   +++YAS + Y DEL+W A WL +AT+++ YL    +  D
Sbjct: 182 RQLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240

Query: 284 NFGGIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKN 343
            FG   W     +WD K +G+QV+ +KL  K           + Y+   + Y+   +N  
Sbjct: 241 EFGLQNWG-GGLNWDSKVSGVQVLLAKLTNK-----------QAYKDTVQSYVNYLIN-- 286

Query: 344 NGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSF 403
              N  +T  GLLYI  W  +++ + AAF++   ++L              +       F
Sbjct: 287 ---NQQKTPKGLLYIDMWGTLRHAANAAFIMLEAAELG-------------LSASSYRQF 330

Query: 404 AKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDNWYSRV 463
           A++Q+DY LG      S++ G+G   PTR HHR +S         +        N ++  
Sbjct: 331 AQTQIDYALGDGG--RSFVCGFGSNPPTRPHHRSSSCPPAPATCDW--------NTFNSP 380

Query: 464 DQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQL 514
           D N +V+ GALVGGPD  DN++D R++Y+  E  T   A      A L  L
Sbjct: 381 DPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 96.94
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.67
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.43
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 96.02
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 93.46
1nc5_A373 Hypothetical protein YTER; structural genomics, he 93.3
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 93.07
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 92.9
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 92.74
1nc5_A373 Hypothetical protein YTER; structural genomics, he 92.52
3pmm_A382 Putative cytoplasmic protein; structural genomics, 90.85
3k11_A445 Putative glycosyl hydrolase; structural genomics, 90.39
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 90.21
3pmm_A382 Putative cytoplasmic protein; structural genomics, 89.04
3k11_A445 Putative glycosyl hydrolase; structural genomics, 88.24
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 85.62
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
Probab=100.00  E-value=1.1e-111  Score=906.47  Aligned_cols=441  Identities=38%  Similarity=0.676  Sum_probs=390.9

Q ss_pred             cccchHHHHHHHHHHHHhhHHhcCCCC-CCCCCCCCCCCCCCCCCCCCCcccccccccCCCCcccccchHHHHHHHHHHH
Q 009690           40 ATATAFDYADALSKSLLYFEAQRSGRL-PYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGV  118 (528)
Q Consensus        40 ~~~~~~~Y~~~l~~sl~f~~~QR~G~l-p~~~~~~w~~~s~l~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~s~~~L~~~~  118 (528)
                      .+.++++|.++|+++|+||++||||++ |+.+|++||++||+.||.+.++||+|||||||||+||++|+++++++|+|++
T Consensus        19 ~~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~   98 (466)
T 2xfg_A           19 PATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAV   98 (466)
T ss_dssp             --CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHHH
Confidence            355679999999999999999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHhcCChhHHHHHHHHHHHHHHhccCCCCeEEEEeCCCCCCCCCCCCCCCCCcccceeecCCCCCchhHHHHHH
Q 009690          119 IEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETA  198 (528)
Q Consensus       119 ~ef~d~~es~~~~pdlLde~kwg~D~llk~~~~~g~~y~qVg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgt~~~~~~A  198 (528)
                      +||++.+++++++||||||||||+|||||||+++|+||+|||++..||.+|++||+++.+|++|.++.++|+|++++++|
T Consensus        99 ~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~A  178 (466)
T 2xfg_A           99 YEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETS  178 (466)
T ss_dssp             HHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHH
T ss_pred             HHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998999999999999


Q ss_pred             HHHHHHchhhccCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccccCCCccccHHHHHHHHHHHHcCChHHHHHH
Q 009690          199 AAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYV  278 (528)
Q Consensus       199 AalA~as~vf~~~d~~~A~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~~  278 (528)
                      ||||+||||||++||+||++||++||++|+||+++|+.|..  +..+++|+|++++.||++|||+|||++||+++|++++
T Consensus       179 AAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~--~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a  256 (466)
T 2xfg_A          179 AALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGY--TAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDKA  256 (466)
T ss_dssp             HHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTC--CTTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred             HHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCC--CccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHHH
Confidence            99999999999999999999999999999999999998743  4567899998889999999999999999999999999


Q ss_pred             HHhhhhcCC----CCC-CcccccccchhHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCccccCCC
Q 009690          279 INNADNFGG----IGW-AITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRG  353 (528)
Q Consensus       279 ~~~~~~~~~----~~~-~~~~~~Wd~~~~g~~~lla~l~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~  353 (528)
                      +++...++.    ..+ ..+.|+||++..|+++||+++..+.  .    ..++.++..++.+++    +.+..++.+||+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~--~----~~~~~~~~~~~~~~~----~~~~~~~~~tp~  326 (466)
T 2xfg_A          257 ESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIKNDN--G----KYKEAIERHLDWWTT----GYNGERITYTPK  326 (466)
T ss_dssp             HHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHHCSS--C----HHHHHHHHHHHHHTT----CBTTBCCCBCTT
T ss_pred             HHHHHHhccccccccccccCcCCcchhHHHHHHHHHHhcCCc--H----HHHHHHHHHHHHHHh----ccCCCccccCCc
Confidence            987655431    111 1357999999999999887654321  0    123445555555443    333456789999


Q ss_pred             CceeecCCCcHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCccCHHHHHHHHHhchhhhcCCCCCCcceEeeeCCCCCCCC
Q 009690          354 GLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRV  433 (528)
Q Consensus       354 G~~~~~~wgs~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~NP~~~SyVtG~G~~~p~~p  433 (528)
                      |++|...|||++|++|.+||+++|++++.       |  ...++++|+++|++|||||||+|  ++|||||||.|+|+||
T Consensus       327 Gl~~~~~Wgs~~~~~n~afl~~~y~~~~~-------~--~~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~p  395 (466)
T 2xfg_A          327 GLAWLDQWGSLRYATTTAFLACVYSDWEN-------G--DKEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRP  395 (466)
T ss_dssp             SCBCCCSSSHHHHHHHHHHHHHHHHTCTT-------S--CHHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCC
T ss_pred             cccccCCCCchHHHHHHHHHHHHHHHhcC-------C--CcccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCC
Confidence            99999999999999999999999988531       2  12348899999999999999999  9999999999999999


Q ss_pred             CCccccccccccCCCccccCCCCcccccCCCCCCCccccccccCCCCCCCCcccCCccccccccccCcchHHHHHHHHhh
Q 009690          434 HHRGASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPDWRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQ  513 (528)
Q Consensus       434 HHR~s~~~~~~~~~~~~~~~~g~~~~~~~~~~n~~~~~GaLVGGPn~~~~y~D~~~~y~~nEvaid~NA~lv~~la~l~~  513 (528)
                      |||+|+|+.              .+.++.|.|||++|+|+||||||..|+|+|+|.+|++|||||||||+||++||+|..
T Consensus       396 HHR~ss~~~--------------~~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~  461 (466)
T 2xfg_A          396 HHRTAHGSW--------------ADSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYK  461 (466)
T ss_dssp             SCHHHHTCS--------------SSCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred             cCchhccCc--------------cccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHH
Confidence            999998761              124567899999999999999999999999999999999999999999999999998


Q ss_pred             hhhh
Q 009690          514 LEEQ  517 (528)
Q Consensus       514 ~~~~  517 (528)
                      ..++
T Consensus       462 ~~g~  465 (466)
T 2xfg_A          462 LYGE  465 (466)
T ss_dssp             HHTC
T ss_pred             HcCC
Confidence            8764
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 528
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-178
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-166
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-165
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-157
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-125
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-121
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  508 bits (1310), Expect = e-178
 Identities = 188/476 (39%), Positives = 260/476 (54%), Gaps = 42/476 (8%)

Query: 44  AFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKF 103
           AF+YA+AL KS+ ++EAQRSG+LP N RV+WR  SGL DG + G+DL GG+YDAGD VKF
Sbjct: 3   AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKF 62

Query: 104 GLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGD 163
           G PMAFT TML+WG IE  E    +G++ +  + ++W  DYFIKAH SPNVL+ +VGDGD
Sbjct: 63  GFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGD 122

Query: 164 TDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHA 223
            DH  W   E M   R ++K+D + PGSD+A ETAAAMAA+SIVF   +P Y+  L+ HA
Sbjct: 123 ADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHA 182

Query: 224 QQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNAD 283
           +QL+ F D +RG Y + V A  ++Y S SGY DEL+WGA WL KAT +D YL       D
Sbjct: 183 KQLYTFADTYRGVYSDCVPA-GAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYD 241

Query: 284 NFG-----GIGWAITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICS 338
                    +       +WD K  G  V+ +K   K+++              A  ++  
Sbjct: 242 FLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETGKQKYID-----------DANRWLDY 290

Query: 339 CLNKNNGSNVDRTRGGLLYIRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQ 398
                NG  V  + GG+  +  W  ++Y +  AF+  +Y+ ++ D  +           Q
Sbjct: 291 WTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPVRK----------Q 340

Query: 399 EILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRGASIVSYRENKGFIGCTQGYDN 458
               FA  Q++Y LG NP N SY+VG+G   P   HHR A                 + +
Sbjct: 341 RYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHG--------------SWTD 386

Query: 459 WYSRVDQNPNVIVGALVGGPDWR-DNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQ 513
             +   +N +V+ GALVGGP    D + D R +Y+  E  T   A      A L +
Sbjct: 387 SIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVE 442
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 92.48
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 90.7
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 87.69
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 83.29
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 80.55
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=1.2e-105  Score=861.16  Aligned_cols=438  Identities=43%  Similarity=0.726  Sum_probs=381.7

Q ss_pred             chHHHHHHHHHHHHhhHHhcCCCCCCCCCCCCCCCCCCCCCCCCCcccccccccCCCCcccccchHHHHHHHHHHHHHhH
Q 009690           43 TAFDYADALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDQVKFGLPMAFTVTMLSWGVIEFR  122 (528)
Q Consensus        43 ~~~~Y~~~l~~sl~f~~~QR~G~lp~~~~~~w~~~s~l~Dg~~~~~dlsGGW~DAGD~~Ky~~~~a~s~~~L~~~~~ef~  122 (528)
                      .+.+|.++|+++|+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++|+
T Consensus         2 ~~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~   81 (460)
T d1tf4a1           2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP   81 (460)
T ss_dssp             CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred             CCCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHCh
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCChhHHHHHHHHHHHHHHhccCCCCeEEEEeCCCCCCCCCCCCCCCCCcccceeecCCCCCchhHHHHHHHHHH
Q 009690          123 EQIAAAGELEHAFEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRHAYKIDENNPGSDLAGETAAAMA  202 (528)
Q Consensus       123 d~~es~~~~pdlLde~kwg~D~llk~~~~~g~~y~qVg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgt~~~~~~AAalA  202 (528)
                      +.++++|++||||||+|||+|||+|||+++|.||+|||++..||.+|++|+.++.+|+.+.++.++|+|++++++||+||
T Consensus        82 ~~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA  161 (460)
T d1tf4a1          82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA  161 (460)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred             HhhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999988888899999999999999


Q ss_pred             HHchhhccCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccccCCCccccHHHHHHHHHHHHcCChHHHHHHHHhh
Q 009690          203 AASIVFKKTNPHYSHLLLHHAQQLFEFGDKFRGKYDESVEAVKSYYASVSGYMDELLWGAMWLSKATDNDKYLQYVINNA  282 (528)
Q Consensus       203 ~as~vf~~~d~~~A~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~~~~~~  282 (528)
                      +|||||+++||+||++||++||++|+||+++|+.|.+..+....+|.+ +++.||++|||+|||++|||++|++++++..
T Consensus       162 ~as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~~~~~-~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~  240 (460)
T d1tf4a1         162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSW-SGYQDELVWGAYWLYKATGDDSYLAKAEYEY  240 (460)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCS-SCSHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred             HHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCcCCCc-cccchHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence            999999999999999999999999999999999887665444445665 8899999999999999999999999998876


Q ss_pred             hhcCCCCC-----CcccccccchhHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCccccCCCCcee
Q 009690          283 DNFGGIGW-----AITEFSWDVKYAGLQVMASKLLAKEQHKKQYGYILEQYRLKAEYYICSCLNKNNGSNVDRTRGGLLY  357 (528)
Q Consensus       283 ~~~~~~~~-----~~~~~~Wd~~~~g~~~lla~l~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~G~~~  357 (528)
                      ..+....+     ....++|+++..++..++++...           ...+++.++.+++.+..........+++.++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (460)
T d1tf4a1         241 DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETG-----------KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAV  309 (460)
T ss_dssp             GGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBC
T ss_pred             hhcccccccccccccccccccchhHHHHHHHHHHhh-----------hhHHHHHHHHHHHHHhhhcccccCCcCCCccee
Confidence            43322111     13458899988777766543221           123344555555544443333456677888888


Q ss_pred             ecCCCcHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCccCHHHHHHHHHhchhhhcCCCCCCcceEeeeCCCCCCCCCCcc
Q 009690          358 IRPWNNMQYVSTAAFLLTIYSDLLLDSNQPLNCNGEIVGHQEILSFAKSQVDYILGSNPMNMSYLVGYGPKYPTRVHHRG  437 (528)
Q Consensus       358 ~~~wgs~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~NP~~~SyVtG~G~~~p~~pHHR~  437 (528)
                      ...|||+++++|.+++++++++++.+          .+++++|+++|++|||||||+||+++|||||+|.|+|+|||||.
T Consensus       310 ~~~WGsn~~~~n~a~~~~~a~~~~~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~  379 (460)
T d1tf4a1         310 LDTWGALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRT  379 (460)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHH
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHhcc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCcc
Confidence            88999999999999999998875432          24678999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCccccCCCCcccccCCCCCCCccccccccCCC-CCCCCcccCCccccccccccCcchHHHHHHHHhhhhh
Q 009690          438 ASIVSYRENKGFIGCTQGYDNWYSRVDQNPNVIVGALVGGPD-WRDNFMDQRNNYMQTEACTYNTAPLVGVFAKLSQLEE  516 (528)
Q Consensus       438 s~~~~~~~~~~~~~~~~g~~~~~~~~~~n~~~~~GaLVGGPn-~~~~y~D~~~~y~~nEvaid~NA~lv~~la~l~~~~~  516 (528)
                      ++|+.              .+....|.||+++++|+|||||| +.+||+|++++|++||||||||||||++||+|++..+
T Consensus       380 s~~~~--------------~~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~  445 (460)
T d1tf4a1         380 AHGSW--------------TDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYG  445 (460)
T ss_dssp             HHTCS--------------SSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHC
T ss_pred             ccCCC--------------ccccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhcC
Confidence            88751              12456788999999999999999 5899999999999999999999999999999999763
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure