Citrus Sinensis ID: 009713

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRIKFYTQEIVFFRQDLLYRMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSLHLYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL
ccHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEHHHHHcccccEEEEEEEEEcccccEEEEEcccEEEEEccccccccccccccEEEEEEEEEEEccEEEEEECccccccccHHHHHHcccccccccccccHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHccccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHccccccccCEEEEEccccccccccccccccccHHHHHHHHccccccEEECccCEEEEccEEEEEEcHHHHHHHHHcccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccEEEEcccccccEEEEccEEEEcccccccccEEEEEEcccccEECccc
*****RK**QKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQF*********************V******************SAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRIKFYTQEIVFFRQDLLYRMRRSCLIP*******DPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSLHLYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFS*L
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MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRIKFYTQEIVFFRQDLLYRMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSLHLYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DNA polymerase epsilon subunit 2 Participates in DNA repair and in chromosomal DNA replication.probableA7YWS7
DNA polymerase epsilon subunit 2 Participates in DNA repair and in chromosomal DNA replication.probableQ5ZKQ6
DNA polymerase epsilon subunit 2 Participates in DNA repair and in chromosomal DNA replication.probableP56282

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.7.-Nucleotidyltransferases.probable
2.7.7.7DNA-directed DNA polymerase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3E0J, chain A
Confidence level:very confident
Coverage over the Query: 104-115,133-253,279-525
View the alignment between query and template
View the model in PyMOL
Template: 3FLO, chain A
Confidence level:very confident
Coverage over the Query: 125-155,168-251,267-520
View the alignment between query and template
View the model in PyMOL
Template: 2V6Z, chain M
Confidence level:confident
Coverage over the Query: 1-73
View the alignment between query and template
View the model in PyMOL