Citrus Sinensis ID: 009818

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520----
MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLIGRRIRLTVKADLDSALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVNFLFYC
cccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHcccccccccccccccccccccccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccccHHHcHHHHHHHHHHHcEEccccccccccccHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccEEEccccccccccccHHHHHHHHHHHccccEEEEccccccccccccHHHHHHHccccccccHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHccccccccHHHHHHcccccccccccEEEEEEcccccHHHHHHHHHHccccEEEEEEcccccccccccccEEEccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEc
ccccccccccccccccccccccccccccccccHHccccccccccccccEEEEEHHHHcHHHHHHHcccccccccccccccccccccccccccHHHHHHEccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccEccccccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccEEEEccccccccccccHHHHHHHHHHHccccEEEcccccccccccccHHHHHHHccccccccHHHHHHHHHHcccEEEEccccHHHHHHHHHccHHHHHcccccHHHHHHccccccccccccEEEEEEcccHHHHHHHHHHHccccEEEEEEccccccccccccHHHHEEEccccccccccccccHHHHcccccccHHHHHHEccHHHccccccccccccccEEEEEEc
mntllnpepsfslipsiritkthylthrrlqasrqfsstdgnrliGRRIRLTVKADLDSALIDqlglkesdiinpaisssyrssklpkpnqtLLEAQAkvctgptqtrplredEAFKVLDTILRSAkgdlkdeeEVSKAQLGAFFSAMTIRanafpeatqwsegeRRAMNTFWPLlmralppdvifiadpegsimggggsigphysgndprEMRLVGALREVLagghlgyeeVQGVlrdvlplqvdnkapgvsESLLSAFLIGQRMNRETDRELKAYCLAfddelgpppvadvkslthygepydgntrfFRSTLFVAAVRSCYGescllhgaewmppkggvteEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGlrehikkrppvatsEKVQQFVRAQGREAIVAgfyhegyeEPLLMLMKRRgvhsglvvkgeegaLSMTTRLRsvnaskglpvnycsgfrslnvestfegdgvsrqsfnlevnasnygfeptntpradrsvnflfyc
mntllnpepsfslipSIRITKTHYLthrrlqasrqfsstdgnrligRRIRLTVKADLDSALIdqlglkesdiinpaisssyrssklpkPNQTLLEAQAKvctgptqtrplredeafKVLDTILRSakgdlkdeeeVSKAQLGAFFSAMTIRANAFpeatqwsegeRRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLrehikkrppvatsEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRlrsvnaskglpvnYCSGFRSLNVESTFEGDGVSRQSFNLEVNAsnygfeptntpradrsvNFLFYC
MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLIGRRIRLTVKADLDSALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPDVIFIADPEgsimggggsigPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVNFLFYC
***********SLIPSIRITKTHYLTHRRLQA*******DGNRLIGRRIRLTVKADLDSALIDQLGLKESDII******************************************FKVLDTIL****************QLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGG*I**********EMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKR**VAT*EKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEG*******FNLEV*******************NFLF**
**********************************QFSSTDGNRLIGRRIRLTVKADLDSA*******************************TLLEAQAKVCTGPTQTRPLREDEAFKVLDTILR***************QLGAFFSAMTIRANAFPE***W*EGERRAMNTFWPLLMRALPPDVIFIADPEGSI********************LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSL************RQSFNLEVNASNYGFEPTNTPRADRSVNFLFYC
********PSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLIGRRIRLTVKADLDSALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKG********SKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVNFLFYC
********PSFS*******************A*RQFSSTDGNRLIGRRIRLTVKADLDSALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVNFLFYC
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLIGRRIRLTVKADLDSALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVNFLFYC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query524 2.2.26 [Sep-21-2011]
O66585309 Uncharacterized protein a yes no 0.370 0.627 0.256 7e-06
>sp|O66585|Y209_AQUAE Uncharacterized protein aq_209 OS=Aquifex aeolicus (strain VF5) GN=aq_209 PE=3 SV=1 Back     alignment and function desciption
 Score = 52.8 bits (125), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 94/230 (40%), Gaps = 36/230 (15%)

Query: 228 LGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGP 287
           L  EE   V R +L  ++       S+   +AFL   R+  ET  EL     A  + +  
Sbjct: 21  LSQEEAYEVFRAILEGKL-------SDIKTTAFLTAMRIKGETSEELLGVIKAIKERMNF 73

Query: 288 PPVADVKSLTHYGEPYDGNTRFFRSTLFV--AAVRSC--YGESCLLHGAEWMPPKGGVTE 343
           P   +       G  YDG  R    T+++  +A+  C   G     H A   P K GVT 
Sbjct: 74  PQKKE--DALDLGLNYDGKNR----TIYILPSALWLCSRLGVEFTNHYALGAPTKEGVTL 127

Query: 344 EQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATS 403
            +++K +G   N+S                +V  +   P LY L+ LR  +  R  + T 
Sbjct: 128 YEVVKELGVDMNVS----------------FVDQKNYAPELYKLMPLRRELGFRSLINTV 171

Query: 404 EKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGAL 453
           EK   F+     + IV   +H+ Y +    L++  G+    ++KG EG +
Sbjct: 172 EK---FLNPFQTKKIVVSIFHKPYFDKNAELLELLGIEDYTIIKGLEGGI 218

Aquifex aeolicus (strain VF5) (taxid: 224324)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query524
255573995589 anthranilate phosphoribosyltransferase, 0.980 0.872 0.810 0.0
225470591593 PREDICTED: anthranilate phosphoribosyltr 0.990 0.875 0.787 0.0
297838857596 hypothetical protein ARALYDRAFT_894871 [ 0.990 0.870 0.756 0.0
449434965591 PREDICTED: anthranilate phosphoribosyltr 0.988 0.876 0.756 0.0
18409618595 putative anthranilate phosphoribosyltran 0.990 0.872 0.763 0.0
224110902601 predicted protein [Populus trichocarpa] 0.979 0.853 0.746 0.0
334183810 632 putative anthranilate phosphoribosyltran 0.990 0.821 0.713 0.0
12324765552 hypothetical protein; 95675-92527 [Arabi 0.874 0.829 0.779 0.0
356526769582 PREDICTED: anthranilate phosphoribosyltr 0.973 0.876 0.736 0.0
125537955588 hypothetical protein OsI_05725 [Oryza sa 0.860 0.767 0.741 0.0
>gi|255573995|ref|XP_002527915.1| anthranilate phosphoribosyltransferase, putative [Ricinus communis] gi|223532690|gb|EEF34472.1| anthranilate phosphoribosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/523 (81%), Positives = 466/523 (89%), Gaps = 9/523 (1%)

Query: 1   MNTLLNPEPSFSLIPSIRITKTHYLTHRRLQASRQFSSTDGNRLIGRR-IRLTVKAD-LD 58
           M  L+NPEP FS+  SIRI     LTH RL +S    STD  R IGRR + L VKA  LD
Sbjct: 1   MKALINPEP-FSI--SIRIASPSNLTHSRLHSSCLRFSTD--RCIGRRNLCLIVKAAALD 55

Query: 59  SALIDQLGLKESDIINPAISSSYRSSKLPKPNQTLLEAQAKVCTGPTQTRPLREDEAFKV 118
           SA++DQLG+ ESDI NPA+SSSYR+SKLPKPNQT+L+AQA+VCTGPTQTRPL ED+AFKV
Sbjct: 56  SAILDQLGIPESDIKNPAVSSSYRNSKLPKPNQTVLDAQARVCTGPTQTRPLNEDQAFKV 115

Query: 119 LDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMR 178
           LDTILRSA+G+LKDEE+VSKAQLGAFF+AMTIRANAFPE TQWSEGE+RAMN FWPLL+R
Sbjct: 116 LDTILRSARGELKDEEKVSKAQLGAFFAAMTIRANAFPEETQWSEGEKRAMNNFWPLLVR 175

Query: 179 ALPPDVIFIADPEGSIMGGGGSIGPHYSGNDPREMRLVGALREVLAGGHLGYEEVQGVLR 238
           ALPPD+IFIADPEGSIM  G SIGP Y GN   EMRLVGALRE+LAGGHLGYEEVQGVLR
Sbjct: 176 ALPPDLIFIADPEGSIMSIGSSIGPQYVGNCTSEMRLVGALREILAGGHLGYEEVQGVLR 235

Query: 239 DVLPLQV-DNKAPG-VSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSL 296
           +VLPL V DN+  G VSESLLSAFLIGQRMNRETDRELKAYCLAFDDELG PPVADV+SL
Sbjct: 236 EVLPLNVGDNECSGGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGSPPVADVRSL 295

Query: 297 THYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNL 356
           THYGEPYDGNTRFFRSTLFVAAVRSCYGES LLHG +WMPPKGG+TEEQMLK+MGA+T+L
Sbjct: 296 THYGEPYDGNTRFFRSTLFVAAVRSCYGESSLLHGVDWMPPKGGITEEQMLKYMGANTSL 355

Query: 357 SVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGRE 416
           + LQAKELLEDEE+GFAY+S REA P LYSL GLREHIKKRPP+AT+EKVQQFVRAQG+E
Sbjct: 356 TPLQAKELLEDEEVGFAYISQREACPPLYSLTGLREHIKKRPPLATTEKVQQFVRAQGKE 415

Query: 417 AIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGF 476
           AIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRS NASKGLPVNYCSGF
Sbjct: 416 AIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTTRLRSANASKGLPVNYCSGF 475

Query: 477 RSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRADRSVN 519
           RSL+  S FE DGVSR+SF++EVNA +YGFEPT+TPR DRSV+
Sbjct: 476 RSLSRASAFEVDGVSRESFSMEVNAKDYGFEPTDTPRTDRSVS 518

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225470591|ref|XP_002274188.1| PREDICTED: anthranilate phosphoribosyltransferase [Vitis vinifera] gi|296083417|emb|CBI23370.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297838857|ref|XP_002887310.1| hypothetical protein ARALYDRAFT_894871 [Arabidopsis lyrata subsp. lyrata] gi|297333151|gb|EFH63569.1| hypothetical protein ARALYDRAFT_894871 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449434965|ref|XP_004135266.1| PREDICTED: anthranilate phosphoribosyltransferase-like [Cucumis sativus] gi|449478600|ref|XP_004155365.1| PREDICTED: anthranilate phosphoribosyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|18409618|ref|NP_564991.1| putative anthranilate phosphoribosyltransferase [Arabidopsis thaliana] gi|13430748|gb|AAK25996.1|AF360286_1 unknown protein [Arabidopsis thaliana] gi|15293217|gb|AAK93719.1| unknown protein [Arabidopsis thaliana] gi|332196959|gb|AEE35080.1| putative anthranilate phosphoribosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224110902|ref|XP_002315676.1| predicted protein [Populus trichocarpa] gi|222864716|gb|EEF01847.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|334183810|ref|NP_001185362.1| putative anthranilate phosphoribosyltransferase [Arabidopsis thaliana] gi|332196960|gb|AEE35081.1| putative anthranilate phosphoribosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|12324765|gb|AAG52347.1|AC011663_26 hypothetical protein; 95675-92527 [Arabidopsis thaliana] gi|12325051|gb|AAG52478.1|AC010796_17 hypothetical protein; 58827-61975 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356526769|ref|XP_003531989.1| PREDICTED: anthranilate phosphoribosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|125537955|gb|EAY84350.1| hypothetical protein OsI_05725 [Oryza sativa Indica Group] gi|125580691|gb|EAZ21622.1| hypothetical protein OsJ_05251 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

No hits with e-value below 0.001 by BLAST

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00009480001
SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (593 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query524
PRK07394342 PRK07394, PRK07394, hypothetical protein; Provisio 2e-23
COG0547338 COG0547, TrpD, Anthranilate phosphoribosyltransfer 7e-15
PRK09071323 PRK09071, PRK09071, hypothetical protein; Validate 1e-04
pfam0288566 pfam02885, Glycos_trans_3N, Glycosyl transferase f 4e-04
>gnl|CDD|168934 PRK07394, PRK07394, hypothetical protein; Provisional Back     alignment and domain information 
 Score =  101 bits (253), Expect = 2e-23
 Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 8/196 (4%)

Query: 259 AFLIGQRMNRETDRELKAYCLAFDDELGP--PPVADVKSLTHYGEPYDGNTRFFRSTLFV 316
           AFLI  R+ R T  EL      +D ELGP     ++ +    +G PYDG +R        
Sbjct: 46  AFLIAHRIKRPTPEELAGMLDTYD-ELGPKLQSPSNQRPPIVFGMPYDGRSRTAPIYPLT 104

Query: 317 AAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGAS-TNLSVLQAKELLEDEEIGFAYV 375
           A + +  G+  +LHG + MP K GV   ++ + +G   T LS+ Q +E    E+ G A++
Sbjct: 105 ALILAAAGQPVVLHGGDRMPTKYGVPLVELWQGLGVDLTGLSLEQVQEGF--EQTGLAFI 162

Query: 376 SLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLM 435
              +  P   SLI  R+ I KRPP+AT E +  +   QG   +V+GF H   E      +
Sbjct: 163 YQPDHFPLAESLIPYRDEIGKRPPLATLELI--WTPHQGDHHLVSGFVHPPTEARAWEAL 220

Query: 436 KRRGVHSGLVVKGEEG 451
           + RG  +   VKG EG
Sbjct: 221 ELRGETNFTTVKGLEG 236

Length = 342
>gnl|CDD|223621 COG0547, TrpD, Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|181637 PRK09071, PRK09071, hypothetical protein; Validated Back     alignment and domain information
>gnl|CDD|145834 pfam02885, Glycos_trans_3N, Glycosyl transferase family, helical bundle domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 524
PRK09522531 bifunctional glutamine amidotransferase/anthranila 100.0
PRK14607534 bifunctional glutamine amidotransferase/anthranila 100.0
COG0547338 TrpD Anthranilate phosphoribosyltransferase [Amino 100.0
PRK07394342 hypothetical protein; Provisional 100.0
PLN02641343 anthranilate phosphoribosyltransferase 100.0
PRK08136317 glycosyl transferase family protein; Provisional 100.0
PRK00188339 trpD anthranilate phosphoribosyltransferase; Provi 100.0
PRK09071323 hypothetical protein; Validated 100.0
TIGR01245330 trpD anthranilate phosphoribosyltransferase. In ma 100.0
PF00591252 Glycos_transf_3: Glycosyl transferase family, a/b 100.0
KOG1438373 consensus Anthranilate phosphoribosyltransferase [ 100.0
PRK06078 434 pyrimidine-nucleoside phosphorylase; Reviewed 100.0
TIGR02644405 Y_phosphoryl pyrimidine-nucleoside phosphorylase. 100.0
PRK04350 490 thymidine phosphorylase; Provisional 100.0
PRK05820 440 deoA thymidine phosphorylase; Reviewed 100.0
TIGR02645493 ARCH_P_rylase putative thymidine phosphorylase. Me 100.0
TIGR02643 437 T_phosphoryl thymidine phosphorylase. Thymidine ph 100.0
TIGR03327 500 AMP_phos AMP phosphorylase. This enzyme family is 100.0
COG0213 435 DeoA Thymidine phosphorylase [Nucleotide transport 99.78
PF0288566 Glycos_trans_3N: Glycosyl transferase family, heli 99.7
COG0512191 PabA Anthranilate/para-aminobenzoate synthases com 99.68
KOG0026223 consensus Anthranilate synthase, beta chain [Amino 99.24
PLN02889 918 oxo-acid-lyase/anthranilate synthase 99.08
PRK08007187 para-aminobenzoate synthase component II; Provisio 98.94
PRK07649195 para-aminobenzoate/anthranilate synthase glutamine 98.67
KOG1224 767 consensus Para-aminobenzoate (PABA) synthase ABZ1 98.54
TIGR00566188 trpG_papA glutamine amidotransferase of anthranila 98.46
PLN02335222 anthranilate synthase 98.35
CHL00101190 trpG anthranilate synthase component 2 98.32
PRK06774191 para-aminobenzoate synthase component II; Provisio 98.24
PRK08857193 para-aminobenzoate synthase component II; Provisio 98.2
PLN02771415 carbamoyl-phosphate synthase (glutamine-hydrolyzin 98.2
PRK05670189 anthranilate synthase component II; Provisional 98.19
PRK06895190 putative anthranilate synthase component II; Provi 98.15
TIGR01815717 TrpE-clade3 anthranilate synthase, alpha proteobac 97.99
PRK05637208 anthranilate synthase component II; Provisional 97.94
TIGR01823 742 PabB-fungal aminodeoxychorismate synthase, fungal 97.89
PRK12838354 carbamoyl phosphate synthase small subunit; Review 97.78
PRK07765214 para-aminobenzoate synthase component II; Provisio 97.76
TIGR01368358 CPSaseIIsmall carbamoyl-phosphate synthase, small 97.75
PRK13566720 anthranilate synthase; Provisional 97.71
cd01744178 GATase1_CPSase Small chain of the glutamine-depend 97.66
cd01743184 GATase1_Anthranilate_Synthase Type 1 glutamine ami 97.64
PRK12564360 carbamoyl phosphate synthase small subunit; Review 97.59
CHL00197382 carA carbamoyl-phosphate synthase arginine-specifi 97.47
PRK06490239 glutamine amidotransferase; Provisional 97.15
PRK09065237 glutamine amidotransferase; Provisional 97.08
PF00117192 GATase: Glutamine amidotransferase class-I; InterP 97.06
PRK00758184 GMP synthase subunit A; Validated 96.78
PRK07567242 glutamine amidotransferase; Provisional 96.74
cd01745189 GATase1_2 Subgroup of proteins having the Type 1 g 96.67
cd01742181 GATase1_GMP_Synthase Type 1 glutamine amidotransfe 96.39
PLN02347536 GMP synthetase 96.39
COG0505368 CarA Carbamoylphosphate synthase small subunit [Am 95.94
PRK11366254 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; 95.56
TIGR00888188 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N 95.15
cd01741188 GATase1_1 Subgroup of proteins having the Type 1 g 94.49
PRK05665240 amidotransferase; Provisional 94.12
PRK00074511 guaA GMP synthase; Reviewed 93.55
PRK13527200 glutamine amidotransferase subunit PdxT; Provision 93.09
PRK08136317 glycosyl transferase family protein; Provisional 92.91
PRK08250235 glutamine amidotransferase; Provisional 92.81
PRK09071323 hypothetical protein; Validated 91.75
PRK07053234 glutamine amidotransferase; Provisional 91.43
PRK13141205 hisH imidazole glycerol phosphate synthase subunit 91.07
TIGR01855196 IMP_synth_hisH imidazole glycerol phosphate syntha 90.7
PRK13181199 hisH imidazole glycerol phosphate synthase subunit 90.62
CHL00188210 hisH imidazole glycerol phosphate synthase subunit 89.51
PF0428271 DUF438: Family of unknown function (DUF438); Inter 89.07
PRK13152201 hisH imidazole glycerol phosphate synthase subunit 88.89
cd01747273 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot 88.85
PRK13170196 hisH imidazole glycerol phosphate synthase subunit 88.54
PRK07394342 hypothetical protein; Provisional 88.06
COG0518198 GuaA GMP synthase - Glutamine amidotransferase dom 85.85
cd01748198 GATase1_IGP_Synthase Type 1 glutamine amidotransfe 85.55
PF0288566 Glycos_trans_3N: Glycosyl transferase family, heli 85.05
PRK05703424 flhF flagellar biosynthesis regulator FlhF; Valida 84.65
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.9e-80  Score=669.34  Aligned_cols=366  Identities=16%  Similarity=0.210  Sum_probs=327.8

Q ss_pred             ceeeCCCCCCCCChhhhhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhHhh
Q 009818           99 KVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLM  177 (524)
Q Consensus        99 ~v~~gp~~~~P~~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~~~~~l~  177 (524)
                      .|++||||+.|.   +++...+. ++.+..++|++| |+|||.|+.+||+.+.+. ..+.|++.+.     +.+.+..+|
T Consensus        51 ~IIlSpGPg~p~---d~~~~~~i-~~~~~~~iPILGIClG~QlLa~a~GG~V~~~-~~~~~G~~~~-----i~~~~~~lf  120 (531)
T PRK09522         51 VLMLSPGPGVPS---EAGCMPEL-LTRLRGKLPIIGICLGHQAIVEAYGGYVGQA-GEILHGKASS-----IEHDGQAMF  120 (531)
T ss_pred             EEEEcCCCCChh---hCCCCHHH-HHHHhcCCCEEEEcHHHHHHHHhcCCEEEeC-CceeeeeEEE-----EeecCCccc
Confidence            699999999997   55555444 777788999999 999999999999999997 7788877542     222221122


Q ss_pred             -----------------hhCCCceEEEeCCCCcccccCCCC----CCCCCCCC---------------------CccCcH
Q 009818          178 -----------------RALPPDVIFIADPEGSIMGGGGSI----GPHYSGND---------------------PREMRL  215 (524)
Q Consensus       178 -----------------~~lp~~~~f~a~p~G~iMg~~~~~----g~~~~~~~---------------------~~~m~l  215 (524)
                                       ..+|+.+.++|..||.+|+++|+.    |++|.|..                     .++..|
T Consensus       121 ~~~~~~~~v~~~Hs~~v~~lP~~l~vlA~sd~~v~ai~~~~~~i~GVQFHPEs~~T~~G~~il~NFl~~~~~~~~~~~~~  200 (531)
T PRK09522        121 AGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPTNTL  200 (531)
T ss_pred             cCCCCCcEEEEehheecccCCCCcEEEEecCCCEEEEEECCCCEEEEEecCccccCcchHHHHHHHHHHHhhcCCCCCCH
Confidence                             468999999998899999999965    66776543                     345679


Q ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCCC
Q 009818          216 VGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKS  295 (524)
Q Consensus       216 ~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~~~~~  295 (524)
                      +++|+|+..|++||++||+++|+.||       +|+++|.|+||||++||+||||+|||+||++|||+++.+++.++...
T Consensus       201 ~~~l~~~~~~~~Lt~eea~~~~~~il-------~g~~~~~qi~AfL~alr~kget~eEl~g~~~a~~~~~~~~~~~~~~~  273 (531)
T PRK09522        201 QPILEKLYQAQTLSQQESHQLFSAVV-------RGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLF  273 (531)
T ss_pred             HHHHHHhhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCCCc
Confidence            99999999999999999999999999       99999999999999999999999999999999999998765433347


Q ss_pred             eeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCCcEEEE
Q 009818          296 LTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYV  375 (524)
Q Consensus       296 vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~GfaFL  375 (524)
                      +|+|||||||++|||+||+ +|+|+|++|+||+|||||++|||+|+  +|+||+|||+++++++++.++|++  .||+||
T Consensus       274 iD~~gtGgdg~~t~nist~-aa~v~A~~Gv~V~kHG~r~~ss~~Gs--advlealGi~~~~~~~~~~~~l~~--~g~~fl  348 (531)
T PRK09522        274 ADIVGTGGDGSNSINISTA-SAFVAAACGLKVAKHGNRSVSSKSGS--SDLLAAFGINLDMNADKSRQALDE--LGVCFL  348 (531)
T ss_pred             ccccCCCCCCCCCcccHHH-HHHHHHhCCCcEEEeCCCCCCCCccH--HHHHHHcCCCCCCCHHHHHHHHHH--hCcEEE
Confidence            9999999999999999999 99999999999999999999999999  999999999999999999999999  999999


Q ss_pred             cccccChhhhhHHhhhcccCCCCccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHcCCCEEEEEEcCCCceee
Q 009818          376 SLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSM  455 (524)
Q Consensus       376 fAp~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~lG~~~alVV~G~eG~DEi  455 (524)
                      |||.|||+|++++++|++||+||++|+.+++   +||+++++||+||||++|.++|+++++++|+++++|||| +|+||+
T Consensus       349 ~ap~~hpam~~~~~~R~~Lg~rT~fN~lgpL---~NPa~~~~~v~Gv~~~~~~~~~a~~l~~lG~~~~~vv~G-~G~DEi  424 (531)
T PRK09522        349 FAPKYHTGFRHAMPVRQQLKTRTLFNVLGPL---INPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHS-GGMDEV  424 (531)
T ss_pred             EhhHhCHHHHHHHHHHHHhCCCcHHHHHHHh---cCCCCCCcEEEEeeCHHHHHHHHHHHHHhCCCeEEEEEC-CCcccc
Confidence            9999999999999999999999999999997   999999999999999999999999999999999999999 899999


Q ss_pred             cCCCcccceEeecccccccCcccccccccccCCCceecEEEEEEecCCCCCCCCCCCC
Q 009818          456 TTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPR  513 (524)
Q Consensus       456 S~~~~~~t~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~l~P~dfGl~~~~~~~  513 (524)
                      |++++  |.+.++                 .++    ++++|+|+|+||||+.+++..
T Consensus       425 s~~~~--t~v~~~-----------------~~g----~i~~~~~~P~d~Gl~~~~~~~  459 (531)
T PRK09522        425 SLHAP--TIVAEL-----------------HDG----EIKSYQLTAEDFGLTPYHQEQ  459 (531)
T ss_pred             CCCCc--eEEEEE-----------------cCC----eEEEEEECHHHcCCCCCCHHH
Confidence            99998  556655                 444    599999999999999988754

>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>COG0547 TrpD Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07394 hypothetical protein; Provisional Back     alignment and domain information
>PLN02641 anthranilate phosphoribosyltransferase Back     alignment and domain information
>PRK08136 glycosyl transferase family protein; Provisional Back     alignment and domain information
>PRK00188 trpD anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09071 hypothetical protein; Validated Back     alignment and domain information
>TIGR01245 trpD anthranilate phosphoribosyltransferase Back     alignment and domain information
>PF00591 Glycos_transf_3: Glycosyl transferase family, a/b domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR000312 The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2 Back     alignment and domain information
>KOG1438 consensus Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06078 pyrimidine-nucleoside phosphorylase; Reviewed Back     alignment and domain information
>TIGR02644 Y_phosphoryl pyrimidine-nucleoside phosphorylase Back     alignment and domain information
>PRK04350 thymidine phosphorylase; Provisional Back     alignment and domain information
>PRK05820 deoA thymidine phosphorylase; Reviewed Back     alignment and domain information
>TIGR02645 ARCH_P_rylase putative thymidine phosphorylase Back     alignment and domain information
>TIGR02643 T_phosphoryl thymidine phosphorylase Back     alignment and domain information
>TIGR03327 AMP_phos AMP phosphorylase Back     alignment and domain information
>COG0213 DeoA Thymidine phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>KOG0026 consensus Anthranilate synthase, beta chain [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02889 oxo-acid-lyase/anthranilate synthase Back     alignment and domain information
>PRK08007 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated Back     alignment and domain information
>KOG1224 consensus Para-aminobenzoate (PABA) synthase ABZ1 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase Back     alignment and domain information
>PLN02335 anthranilate synthase Back     alignment and domain information
>CHL00101 trpG anthranilate synthase component 2 Back     alignment and domain information
>PRK06774 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK08857 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PLN02771 carbamoyl-phosphate synthase (glutamine-hydrolyzing) Back     alignment and domain information
>PRK05670 anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK06895 putative anthranilate synthase component II; Provisional Back     alignment and domain information
>TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade Back     alignment and domain information
>PRK05637 anthranilate synthase component II; Provisional Back     alignment and domain information
>TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade Back     alignment and domain information
>PRK12838 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>PRK07765 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit Back     alignment and domain information
>PRK13566 anthranilate synthase; Provisional Back     alignment and domain information
>cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II Back     alignment and domain information
>cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase Back     alignment and domain information
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional Back     alignment and domain information
>PRK06490 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK09065 glutamine amidotransferase; Provisional Back     alignment and domain information
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group [] Back     alignment and domain information
>PRK00758 GMP synthase subunit A; Validated Back     alignment and domain information
>PRK07567 glutamine amidotransferase; Provisional Back     alignment and domain information
>cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional Back     alignment and domain information
>TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit Back     alignment and domain information
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>PRK05665 amidotransferase; Provisional Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>PRK13527 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK08136 glycosyl transferase family protein; Provisional Back     alignment and domain information
>PRK08250 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK09071 hypothetical protein; Validated Back     alignment and domain information
>PRK07053 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Back     alignment and domain information
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional Back     alignment and domain information
>PF04282 DUF438: Family of unknown function (DUF438); InterPro: IPR007380 This is a a group of uncharacterised proteins Back     alignment and domain information
>PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase Back     alignment and domain information
>PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK07394 hypothetical protein; Provisional Back     alignment and domain information
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query524
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 48.7 bits (115), Expect = 4e-06
 Identities = 49/366 (13%), Positives = 98/366 (26%), Gaps = 118/366 (32%)

Query: 227 HLGYE--EVQGVLRDVLPLQVDN-----KAPGVSESLLSAFLIGQRMNRETDRELKAYCL 279
           H+ +E  E Q   +D+L +  D          V +   S           +  E      
Sbjct: 6   HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSIL---------SKEE------ 50

Query: 280 AFDDELG-PPPVADVK----SLTHYGEPYDGNTRFFRSTL-----FVAA----------- 318
             D  +     V+       +L    E  +   +F    L     F+ +           
Sbjct: 51  -IDHIIMSKDAVSGTLRLFWTLLSKQE--EMVQKFVEEVLRINYKFLMSPIKTEQRQPSM 107

Query: 319 VRSCYGESCL--LHGAEWMPPKGGVT-EEQMLKFMGASTNL----------------SVL 359
           +   Y       L+    +  K  V+  +  LK   A   L                + +
Sbjct: 108 MTRMY-IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166

Query: 360 QAKELLEDEEI------GFAYVSLREA-RP--------SLYSLIGL----REHIKKRPPV 400
            A ++    ++         +++L+    P         L   I      R        +
Sbjct: 167 -ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225

Query: 401 ATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALS------ 454
                +Q  +R             + YE  LL+L     V +         A +      
Sbjct: 226 RI-HSIQAELRRL--------LKSKPYENCLLVL---LNVQNAKAWN----AFNLSCKIL 269

Query: 455 MTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVS-RQSFNLEVNASNYGFEPTNTPR 513
           +TTR + V        ++ S   + ++        ++  +     +        P + PR
Sbjct: 270 LTTRFKQV-------TDFLSAATTTHISLDHHSMTLTPDEV--KSLLLKYLDCRPQDLPR 320

Query: 514 ADRSVN 519
              + N
Sbjct: 321 EVLTTN 326
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query524
1khd_A345 Anthranilate phosphoribosyltransferase; type 3 PRT 100.0
4hkm_A346 Anthranilate phosphoribosyltransferase; structural 100.0
1vqu_A374 Anthranilate phosphoribosyltransferase 2; 17130499 100.0
1o17_A345 Anthranilate PRT, anthranilate phosphoribosyltrans 100.0
3r88_A377 Anthranilate phosphoribosyltransferase; anthranili 100.0
2elc_A329 Trp D, anthranilate phosphoribosyltransferase; str 100.0
2dsj_A 423 Pyrimidine-nucleoside (thymidine) phosphorylase; p 100.0
1brw_A 433 PYNP, protein (pyrimidine nucleoside phosphorylase 100.0
1uou_A 474 Thymidine phosphorylase; transferase, glycosyltran 100.0
3h5q_A 436 PYNP, pyrimidine-nucleoside phosphorylase; structu 100.0
2tpt_A 440 Thymidine phosphorylase; transferase, salvage path 100.0
1qdl_B195 Protein (anthranilate synthase (TRPG-SUBUNIT)); tr 97.92
3r75_A645 Anthranilate/para-aminobenzoate synthases compone; 97.78
1i1q_B192 Anthranilate synthase component II; tryptophan bio 97.59
1a9x_B379 Carbamoyl phosphate synthetase (small chain); amid 97.43
1wl8_A189 GMP synthase [glutamine-hydrolyzing] subunit A; tr 96.97
3l7n_A236 Putative uncharacterized protein; glutamine amidot 96.74
2a9v_A212 GMP synthase; structural genomics, joint center fo 96.53
1o1y_A239 Conserved hypothetical protein TM1158; flavodoxin- 96.3
3m3p_A250 Glutamine amido transferase; structural genomics, 96.08
3uow_A556 GMP synthetase; structural genomics consortium, SG 95.06
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 94.94
1gpm_A525 GMP synthetase, XMP aminase; class I glutamine ami 94.41
2ywb_A503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 94.36
2vpi_A218 GMP synthase; guanine monophosphate synthetase, ph 93.79
2v4u_A289 CTP synthase 2; pyrimidine biosynthesis, glutamine 93.39
2w7t_A273 CTP synthetase, putative cytidine triphosphate syn 93.16
1s1m_A545 CTP synthase; CTP synthetase, UTP:ammonia ligase ( 93.06
3tqi_A527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 92.32
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 91.27
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 89.22
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A Back     alignment and structure
Probab=100.00  E-value=6.4e-70  Score=560.55  Aligned_cols=263  Identities=17%  Similarity=0.244  Sum_probs=239.4

Q ss_pred             ccCcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCC
Q 009818          211 REMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPV  290 (524)
Q Consensus       211 ~~m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~  290 (524)
                      .+|+|+++|+|+.+|++||++|++++|+.||       +|+++|.|+||||+|||+||||+|||+||++||++++.+++.
T Consensus         9 ~~~~~~~~i~kl~~g~~Lt~eEa~~~~~~il-------~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~~   81 (345)
T 1khd_A            9 TIFTHQPILEKLFKSQSMTQEESHQLFAAIV-------RGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFPR   81 (345)
T ss_dssp             ---CCHHHHHHHHTTCCCCHHHHHHHHHHHT-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCCCCC
T ss_pred             cccCHHHHHHHHhCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCC
Confidence            4577899999999999999999999999999       999999999999999999999999999999999999998876


Q ss_pred             CCCCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCC-CCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcC
Q 009818          291 ADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP-KGGVTEEQMLKFMGASTNLSVLQAKELLEDEE  369 (524)
Q Consensus       291 ~~~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsS-ksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~  369 (524)
                      +....||+|||||||.+||||||+ +|+|+|++|+||+|||||++|| |+|+  +|+||+||++++++++++.++|++  
T Consensus        82 ~~~~~vD~~gTGGdg~~tfNiSt~-~A~v~Aa~Gv~VakHGnr~~ss~~~Gs--aDvLeaLGv~~~~~~~~~~~~l~~--  156 (345)
T 1khd_A           82 PDYDFADIVGTGGDGTNSINISTA-SAFVAASCGAKVAKHGNRSVCQPLAGS--CDLLQAFGIRLDMSAEDSRQALDD--  156 (345)
T ss_dssp             CSSCCEEEEECCCCSSCBCCCHHH-HHHHHHHHTCCEEEEECC-----------CHHHHHTTCCTTCCHHHHHHHHHH--
T ss_pred             CCCCeeeecCCCCCCCCccchHHH-HHHHHHhCCCcEEEeCCCCCCCCcccH--HHHHHhCCCCCCCCHHHHHHHHHH--
Confidence            433479999999999999999999 9999999999999999999999 9999  999999999999999999999999  


Q ss_pred             CcEEEEcccccChhhhhHHhhhcccCCCCccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHcCCCEEEEEEcC
Q 009818          370 IGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGE  449 (524)
Q Consensus       370 ~GfaFLfAp~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~lG~~~alVV~G~  449 (524)
                      .||||+|||.|||+|++++++|++||+||++|..+++   +||+++++||+||||++|.++|+++|+.+|.++++|||| 
T Consensus       157 ~gi~fl~a~~~hPa~k~l~~~R~~Lg~rTvfn~lgpL---~nPa~~~~~v~GV~~~~~~~~~a~~l~~lG~~~a~vv~G-  232 (345)
T 1khd_A          157 LNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPL---INPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHG-  232 (345)
T ss_dssp             HSEEEEEHHHHCGGGGGGHHHHHHHCSCCTHHHHGGG---CCTTCCSEEEEECSSGGGHHHHHHHHHHTTCSEEEEEEE-
T ss_pred             CCEEEEehhhhCHHHHHHHHHHHHhCCCCHHHHHHHh---cCCcCCCeEEEeecCHHHHHHHHHHHHHhCCCeEEEEeC-
Confidence            9999999999999999999999999999999999997   999999999999999999999999999999999999999 


Q ss_pred             CCceeecCCCcccceEeecccccccCcccccccccccCCCceecEEEEEEecCCCCCCCCCCC
Q 009818          450 EGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTP  512 (524)
Q Consensus       450 eG~DEiS~~~~~~t~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~l~P~dfGl~~~~~~  512 (524)
                      ||+||+|++++  |.+.++                 +++    ++++|+|+|+|||++.++..
T Consensus       233 dG~dEis~~~~--t~v~~~-----------------~~g----~i~~~~i~p~~~G~~~~~~~  272 (345)
T 1khd_A          233 GGMDEVAIHTP--TQVAEL-----------------NNG----EIESYQLSPQDFGLQSYSLN  272 (345)
T ss_dssp             TTBSSCCSSSC--EEEEEE-----------------ETT----EEEEEEECGGGGTCCCBCGG
T ss_pred             CCcceecCCCc--eEEEEE-----------------eCC----EEEEEEECHHHcCCCcCCcc
Confidence            99999999988  556655                 434    59999999999999887764
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV} Back     alignment and structure
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP} Back     alignment and structure
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A* Back     alignment and structure
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A Back     alignment and structure
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A Back     alignment and structure
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus} Back     alignment and structure
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 Back     alignment and structure
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A Back     alignment and structure
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus} Back     alignment and structure
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A Back     alignment and structure
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1 Back     alignment and structure
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A* Back     alignment and structure
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B* Back     alignment and structure
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B* Back     alignment and structure
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A Back     alignment and structure
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} Back     alignment and structure
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1 Back     alignment and structure
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1 Back     alignment and structure
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A* Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens} Back     alignment and structure
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A Back     alignment and structure
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} Back     alignment and structure
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Back     alignment and structure
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 524
d1o17a2273 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltra 8e-09
d1khda2264 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltra 1e-08
d2elca2264 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltra 3e-07
d1o17a170 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltrans 2e-05
d1brwa170 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphoryl 8e-05
d2elca152 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltrans 9e-05
d1khda169 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltran 3e-04
>d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
domain: Anthranilate phosphoribosyltransferase (TrpD)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 54.3 bits (130), Expect = 8e-09
 Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 13/160 (8%)

Query: 300 GEPYDGNTRFFRSTL--FVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLS 357
           G   DG      ST    + ++          HG   +  K G  +  +L+ +G +  + 
Sbjct: 9   GTGGDGLGTVNVSTASAILLSL----VNPVAKHGNRAVSGKSGSAD--VLEALGYNIIVP 62

Query: 358 VLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREA 417
             +AKEL+   +  F ++  +   P++ ++  +R+ +  R        +     A+    
Sbjct: 63  PERAKELVN--KTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAK---Y 117

Query: 418 IVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMTT 457
            + G + + + + L         +  ++V GE G   ++ 
Sbjct: 118 QLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSP 157
>d1khda2 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Length = 264 Back     information, alignment and structure
>d2elca2 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Length = 264 Back     information, alignment and structure
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 70 Back     information, alignment and structure
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 70 Back     information, alignment and structure
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Length = 52 Back     information, alignment and structure
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Length = 69 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query524
d1o17a2273 Anthranilate phosphoribosyltransferase (TrpD) {Arc 100.0
d1khda2264 Anthranilate phosphoribosyltransferase (TrpD) {Pec 100.0
d2elca2264 Anthranilate phosphoribosyltransferase (TrpD) {The 100.0
d1brwa2260 Pyrimidine nucleoside phosphorylase {Bacillus stea 100.0
d1uoua2273 Thymidine phosphorylase {Human (Homo sapiens) [Tax 100.0
d2tpta2265 Thymidine phosphorylase {Escherichia coli [TaxId: 100.0
d1khda169 Anthranilate phosphoribosyltransferase (TrpD) {Pec 99.72
d1o17a170 Anthranilate phosphoribosyltransferase (TrpD) {Arc 99.71
d1brwa170 Pyrimidine nucleoside phosphorylase {Bacillus stea 99.66
d1uoua168 Thymidine phosphorylase {Human (Homo sapiens) [Tax 99.61
d2tpta170 Thymidine phosphorylase {Escherichia coli [TaxId: 99.59
d2elca152 Anthranilate phosphoribosyltransferase (TrpD) {The 99.49
d1a9xb2228 Carbamoyl phosphate synthetase, small subunit C-te 98.82
d1i7qb_192 Anthranilate synthase GAT subunit, TrpG {Serratia 98.24
d1qdlb_195 Anthranilate synthase GAT subunit, TrpG {Archaeon 97.87
d1wl8a1188 GMP synthase subunit A, GuaAA {Archaeon Pyrococcus 97.81
d1gpma2205 GMP synthetase {Escherichia coli [TaxId: 562]} 97.4
d2a9va1196 GMP synthase subunit A, GuaAA {Archaeon Thermoplas 97.08
d1o1ya_230 Hypothetical protein TM1158 {Thermotoga maritima [ 96.25
d2elca152 Anthranilate phosphoribosyltransferase (TrpD) {The 88.03
d2nv0a1195 Hypothetical protein YaaE {Bacillus subtilis [TaxI 83.42
>d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
domain: Anthranilate phosphoribosyltransferase (TrpD)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=100.00  E-value=1.4e-57  Score=453.14  Aligned_cols=189  Identities=16%  Similarity=0.195  Sum_probs=174.9

Q ss_pred             CCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCCcEE
Q 009818          294 KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFA  373 (524)
Q Consensus       294 ~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~Gfa  373 (524)
                      ..||+|||||||++||||||+ +|||+|++| ||+|||||++||||||  +||||+|||++++++++++++|++  .||+
T Consensus         3 ~~~D~~GTGgDg~~t~NiSt~-~a~v~a~~g-~VaKHGnr~~ssk~GS--aDvLe~LGi~~~~~~~~~~~~l~~--~g~~   76 (273)
T d1o17a2           3 NAIDTAGTGGDGLGTVNVSTA-SAILLSLVN-PVAKHGNRAVSGKSGS--ADVLEALGYNIIVPPERAKELVNK--TNFV   76 (273)
T ss_dssp             TCEECCC----CCCBCCHHHH-HHHHHTTTS-CEEEEECCCSSSSCSH--HHHHHHHTBCCCCCHHHHHHHHHH--HSEE
T ss_pred             CccccCcCCCCCCCCcchhHH-HHHHHhcCC-cEEEECCCCCCCCcCH--HHHHHHcCCCCCCCHHHHHHHHHH--cCce
Confidence            379999999999999999999 999999998 9999999999999999  999999999999999999999999  9999


Q ss_pred             EEcccccChhhhhHHhhhcccCCCCccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHcCCCEEEEEEcCCCce
Q 009818          374 YVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGAL  453 (524)
Q Consensus       374 FLfAp~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~lG~~~alVV~G~eG~D  453 (524)
                      |||||.|||+|++++++|++||+||++|+.+++   +||+++++||+||||++|+++|+++|+++|.++++||||.||+|
T Consensus        77 FlfAp~~hPamk~v~~vRk~Lg~rTiFN~lgPL---~NPa~~~~qliGv~~~~~~~~~a~~l~~lg~~~a~vv~G~dG~D  153 (273)
T d1o17a2          77 FLFAQYYHPAMKNVANVRKTLGIRTIFNILGPL---TNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGID  153 (273)
T ss_dssp             EEEHHHHCGGGGGTHHHHHHHCSCCGGGGCGGG---CCTTCCSEEEEECSSHHHHHHHHHHHTTSCCSEEEEEEETTTBS
T ss_pred             EeeccccChHHHHHHHHHHHcCCCchhhhhhhc---cCCcCcceeeeccccHHHHHHHHHHHHhhcccceEEecCCcccc
Confidence            999999999999999999999999999999997   99999999999999999999999999999999999999999999


Q ss_pred             eecCCCcccceEeecccccccCcccccccccccCCCceecEEEEEEecCCCCCCCCCCCCC
Q 009818          454 SMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPRA  514 (524)
Q Consensus       454 EiS~~~~~~t~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~l~P~dfGl~~~~~~~~  514 (524)
                      |+|++++  |.+.++                 +++    ++++|+|+|+||||+.++...+
T Consensus       154 Eis~~g~--t~v~~~-----------------~~g----~i~~~~i~P~d~Gl~~~~~~~l  191 (273)
T d1o17a2         154 EVSPIGN--TFMKIV-----------------SKR----GIEEVKLNVTDFGISPIPIEKL  191 (273)
T ss_dssp             SCCSSSE--EEEEEE-----------------ETT----EEEEEEEEGGGGTCCCCCGGGT
T ss_pred             chhcccc--ceeeec-----------------ccc----cceeeeeehhhhcccccccccc
Confidence            9999988  556655                 444    4899999999999998887544
>d1khda2 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d2elca2 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1brwa2 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1uoua2 c.27.1.1 (A:101-373) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2tpta2 c.27.1.1 (A:71-335) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1uoua1 a.46.2.1 (A:33-100) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure