Citrus Sinensis ID: 009846

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520----
MGEKSKSKGCFGWFLVLVLLALVVGAIVYTIKKKTSHSDKPAPVPGPPGAVEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVTTSSAVQSFT
cccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHccHHcccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHccccccccccc
cccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEccccEcccccEccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHHccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHcccccccHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccEccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccEcccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHcccccccccccccHHcccccccccEEEEEEEccccccccccccccccccccccHHccHHHHHHHHHHHHccccccccc
mgekskskgcfGWFLVLVLLALVVGAIVYTIKkktshsdkpapvpgppgaVEKKYAEALKVAMQFFdvqksgklvnnkiswrgdsalkdgrdmgldltkgmydagdhmkfgfpmAFTATVLSWAILEygdqmdvvdqlqpaQDSLKWITDYLisahpkenVLIVqvgnpdkdhkcwerpesmaeerpltqvntsfpgtEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNfadnhrgsysvsipqvqnfynstgygdELLWAASWLYHAtgdhsylqyvsgkngkdfanwgspswfswdnklAGTQVLLSRLsffsgkdisgnsglrMYRKTAEAVMcgllpksptattsrtesgLIWVSEWNSLQHPVASAFLAAVYSDYMltsrtaeltcdghsfkpsdlrdFAKDQadyilgnnplkMSFLvgygkkypqyvhhrgasipadattgcrdgfkwldskkpnpnvavgglvggpflnetyidsrnnsmqaepstynGAVIVGLLSSLVTTSSAVQSFT
mgekskskgcfGWFLVLVLLALVVGAIVYTIkkktshsdkpapvpgpPGAVEKKYAEALKVAMQFFdvqksgklvnnkiswrgdsalkdgrDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPesmaeerpltqvnTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVttssavqsft
MGEKSKSKGCFGWFlvlvllalvvGAIVYTIKKKTSHSDKpapvpgppgavEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGtevaaetaaamasasLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIvgllsslvttssavqsFT
********GCFGWFLVLVLLALVVGAIVYTIK**********************YAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGN*********************************************************LLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLP*********TESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYID***********TYNGAVIVGLLSSLV**********
*********CFGWFLVLVLLALVVGAIVYTIKKK**************GAVEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLV**********
MGEKSKSKGCFGWFLVLVLLALVVGAIVYTIKK*************PPGAVEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVT*********
*GEKSKSKGCFGWFLVLVLLALVVGAIVYTIKKKT****************EKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVTTS*******
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGEKSKSKGCFGWFLVLVLLALVVGAIVYTIKKKTSHSDKPAPVPGPPGAVEKKYAEALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVTTSSAVQSFT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query524 2.2.26 [Sep-21-2011]
Q8LCP6525 Endoglucanase 10 OS=Arabi yes no 0.994 0.992 0.722 0.0
Q69SG5528 Endoglucanase 24 OS=Oryza yes no 0.990 0.982 0.662 0.0
Q9FXI9515 Endoglucanase 2 OS=Arabid no no 0.921 0.937 0.715 0.0
Q5Z9P8518 Endoglucanase 18 OS=Oryza no no 0.973 0.984 0.636 0.0
Q8L7I0 626 Endoglucanase 19 OS=Arabi no no 0.879 0.736 0.465 1e-115
A2XYW8 625 Endoglucanase 13 OS=Oryza N/A no 0.877 0.736 0.464 1e-113
Q0J930 625 Endoglucanase 13 OS=Oryza no no 0.877 0.736 0.462 1e-113
Q42059 620 Endoglucanase 6 OS=Arabid no no 0.887 0.75 0.448 1e-112
Q6Z5P2531 Endoglucanase 7 OS=Oryza no no 0.874 0.862 0.453 1e-110
O48766525 Endoglucanase 11 OS=Arabi no no 0.858 0.857 0.451 1e-109
>sp|Q8LCP6|GUN10_ARATH Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75680 PE=2 SV=2 Back     alignment and function desciption
 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/526 (72%), Positives = 447/526 (84%), Gaps = 5/526 (0%)

Query: 1   MGEKSKSKGCFGWFLVLVLLALVVGAIVYTIK---KKTSHSDKPAPVPGPPGAVEKKYAE 57
           M EKSKS+G  GWF+ +++LA V+ A+VYT+K   KK+   D   PVPGPPGA++KKYA+
Sbjct: 1   MEEKSKSRGWCGWFIAIIVLASVILAVVYTVKLRTKKSGDDDGGGPVPGPPGAIDKKYAD 60

Query: 58  ALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFT 117
           ALK+A+QFFD+QKSGKL NNKI WRGDS LKDG +  LDL+KG+YDAGDH+KFGFPMAFT
Sbjct: 61  ALKLALQFFDIQKSGKLENNKIPWRGDSGLKDGSEDNLDLSKGLYDAGDHIKFGFPMAFT 120

Query: 118 ATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWE 177
           ATVLSW+ILEYGDQM+ V+QL PA+DSL+WITDYLI AHP +NVL +QVG+P  DH CWE
Sbjct: 121 ATVLSWSILEYGDQMNAVNQLDPAKDSLRWITDYLIKAHPSDNVLYIQVGDPKVDHPCWE 180

Query: 178 RPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNFA 237
           RPE M E+RPLT+++   PGTEVAAETAAAMASASLVFK SD TYS++LLKHA+QLFNFA
Sbjct: 181 RPEDMKEKRPLTKIDVDTPGTEVAAETAAAMASASLVFKDSDPTYSATLLKHAKQLFNFA 240

Query: 238 DNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGS 297
           D  RGSYSV+IP+VQ FYNSTGYGDELLWAASWLYHAT D +YL YVS  +GK+FA++G+
Sbjct: 241 DTKRGSYSVNIPEVQKFYNSTGYGDELLWAASWLYHATEDKTYLDYVSN-HGKEFASFGN 299

Query: 298 PSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRT 357
           P+WFSWDNKLAGTQVLLSRL FF  KD+SG+ GL  YR TA+AVMCGLLPKSPT+T SRT
Sbjct: 300 PTWFSWDNKLAGTQVLLSRLLFFK-KDLSGSKGLGNYRNTAKAVMCGLLPKSPTSTASRT 358

Query: 358 ESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADY 417
             GLIWVSEWNS+Q  V+SAFLA+++SDYMLTSR  +++CDG  FK ++LRDFAK QADY
Sbjct: 359 NGGLIWVSEWNSMQQSVSSAFLASLFSDYMLTSRIHKISCDGKIFKATELRDFAKSQADY 418

Query: 418 ILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLV 477
           +LG NPL  SF+VGYG KYPQ+VHHRGASIPADATTGC DGFKW +S KPNPN+A G LV
Sbjct: 419 MLGKNPLGTSFVVGYGDKYPQFVHHRGASIPADATTGCLDGFKWFNSTKPNPNIAYGALV 478

Query: 478 GGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVTTSSAVQSF 523
           GGPF NET+ DSR N MQ EP+TYN A++VGLLSSLVTTSS +QS 
Sbjct: 479 GGPFFNETFTDSRENPMQNEPTTYNNALLVGLLSSLVTTSSTLQSL 524

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q69SG5|GUN24_ORYSJ Endoglucanase 24 OS=Oryza sativa subsp. japonica GN=Os09g0533900 PE=2 SV=1 Back     alignment and function description
>sp|Q9FXI9|GUN2_ARATH Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z9P8|GUN18_ORYSJ Endoglucanase 18 OS=Oryza sativa subsp. japonica GN=Os06g0715300 PE=2 SV=1 Back     alignment and function description
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|A2XYW8|GUN13_ORYSI Endoglucanase 13 OS=Oryza sativa subsp. indica GN=GLU6 PE=3 SV=2 Back     alignment and function description
>sp|Q0J930|GUN13_ORYSJ Endoglucanase 13 OS=Oryza sativa subsp. japonica GN=GLU6 PE=2 SV=1 Back     alignment and function description
>sp|Q42059|GUN6_ARATH Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2 Back     alignment and function description
>sp|Q6Z5P2|GUN7_ORYSJ Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1 Back     alignment and function description
>sp|O48766|GUN11_ARATH Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query524
315419011526 EG [Gossypium hirsutum] 1.0 0.996 0.798 0.0
225458016525 PREDICTED: endoglucanase 24 [Vitis vinif 0.998 0.996 0.802 0.0
357466913535 Endoglucanase [Medicago truncatula] gi|3 1.0 0.979 0.773 0.0
255538902523 endo-1,4-beta-glucanase, putative [Ricin 0.996 0.998 0.797 0.0
356509613529 PREDICTED: endoglucanase 24-like [Glycin 1.0 0.990 0.797 0.0
356518028529 PREDICTED: endoglucanase 24-like [Glycin 1.0 0.990 0.795 0.0
429326614523 korrigan [Populus tomentosa] 0.996 0.998 0.777 0.0
224062021523 predicted protein [Populus trichocarpa] 0.996 0.998 0.775 0.0
224085835523 predicted protein [Populus trichocarpa] 0.996 0.998 0.773 0.0
449437218523 PREDICTED: endoglucanase 2-like [Cucumis 0.996 0.998 0.746 0.0
>gi|315419011|gb|ADU15552.1| EG [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  866 bits (2237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/526 (79%), Positives = 474/526 (90%), Gaps = 2/526 (0%)

Query: 1   MGEKSKSKGCFGWFLVLVLLALVVGAIVYTIKKKTSHSD--KPAPVPGPPGAVEKKYAEA 58
           MG++SKS GC GW L +V+LALVVGAIVY +K+K  H++  KP+PVPGPPGA++KKYA+A
Sbjct: 1   MGKESKSGGCLGWLLAIVILALVVGAIVYAVKQKIDHANDNKPSPVPGPPGAIDKKYADA 60

Query: 59  LKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTA 118
           LK+AMQFFD+QKSGKLVNNKISWRGDS LKDG +  LDL+KGMYDAGDHMKFGFPMAFTA
Sbjct: 61  LKIAMQFFDIQKSGKLVNNKISWRGDSGLKDGNEANLDLSKGMYDAGDHMKFGFPMAFTA 120

Query: 119 TVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWER 178
           TVLSWAILEYGDQM  V+QL+PAQ SLKWITD+LI+AHPK+NVL +QVG+PD DHKCWER
Sbjct: 121 TVLSWAILEYGDQMAAVNQLEPAQQSLKWITDFLINAHPKDNVLYIQVGDPDLDHKCWER 180

Query: 179 PESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNFAD 238
           PE+M E+RPLTQVN + PGTEVAAETAAAMASASLVFK S+S YSS+LLKHA+QLFNFAD
Sbjct: 181 PENMKEKRPLTQVNITVPGTEVAAETAAAMASASLVFKTSNSAYSSTLLKHAKQLFNFAD 240

Query: 239 NHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSP 298
            +  SYS +IP+V  +YNSTGYGDELLWAASWLYHATGD SYL Y +G+NGK FA+WGSP
Sbjct: 241 KYPASYSENIPEVATYYNSTGYGDELLWAASWLYHATGDRSYLDYATGENGKLFASWGSP 300

Query: 299 SWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTE 358
           +WFSWDNK AGTQVLLSRLS F  K +SGNSGL  YR +AE VMCGLLPKSP+AT+SRT+
Sbjct: 301 TWFSWDNKNAGTQVLLSRLSLFGAKGVSGNSGLGNYRSSAEGVMCGLLPKSPSATSSRTD 360

Query: 359 SGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYI 418
            GL+W+SEWN+LQHPVASAFLAA+YSDYMLTS+TA++TC  HSFKPSDLR FAK QADY+
Sbjct: 361 GGLVWISEWNALQHPVASAFLAALYSDYMLTSQTAKITCGDHSFKPSDLRKFAKSQADYV 420

Query: 419 LGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVG 478
           LG NPLKMSFLVGYG KYPQYVHHRGASIPADATTGC DGFKWLDS +PNPNVAVGGLVG
Sbjct: 421 LGKNPLKMSFLVGYGDKYPQYVHHRGASIPADATTGCTDGFKWLDSTEPNPNVAVGGLVG 480

Query: 479 GPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVTTSSAVQSFT 524
           GPFLNETYIDSRNNSMQAEP+TYN A+IVGLLSSLVTTSSAV+SFT
Sbjct: 481 GPFLNETYIDSRNNSMQAEPTTYNSALIVGLLSSLVTTSSAVKSFT 526

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225458016|ref|XP_002276739.1| PREDICTED: endoglucanase 24 [Vitis vinifera] gi|302142640|emb|CBI19843.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357466913|ref|XP_003603741.1| Endoglucanase [Medicago truncatula] gi|355492789|gb|AES73992.1| Endoglucanase [Medicago truncatula] Back     alignment and taxonomy information
>gi|255538902|ref|XP_002510516.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223551217|gb|EEF52703.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356509613|ref|XP_003523541.1| PREDICTED: endoglucanase 24-like [Glycine max] Back     alignment and taxonomy information
>gi|356518028|ref|XP_003527686.1| PREDICTED: endoglucanase 24-like [Glycine max] Back     alignment and taxonomy information
>gi|429326614|gb|AFZ78647.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|224062021|ref|XP_002300715.1| predicted protein [Populus trichocarpa] gi|222842441|gb|EEE79988.1| predicted protein [Populus trichocarpa] gi|347466551|gb|AEO97188.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466605|gb|AEO97215.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224085835|ref|XP_002307711.1| predicted protein [Populus trichocarpa] gi|222857160|gb|EEE94707.1| predicted protein [Populus trichocarpa] gi|347466553|gb|AEO97189.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466607|gb|AEO97216.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449437218|ref|XP_004136389.1| PREDICTED: endoglucanase 2-like [Cucumis sativus] gi|449505733|ref|XP_004162553.1| PREDICTED: endoglucanase 2-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query524
TAIR|locus:2005599525 GH9B7 "glycosyl hydrolase 9B7" 0.961 0.96 0.667 2.6e-189
TAIR|locus:2035384515 GH9B5 "glycosyl hydrolase 9B5" 0.900 0.916 0.675 2.8e-185
TAIR|locus:2136073 626 GH9C3 "glycosyl hydrolase 9C3" 0.851 0.712 0.451 2.2e-105
TAIR|locus:2028441 627 GH9C1 "glycosyl hydrolase 9C1" 0.849 0.709 0.458 2.3e-103
TAIR|locus:2014205 620 GH9C2 "glycosyl hydrolase 9C2" 0.851 0.719 0.434 5.4e-102
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.845 0.843 0.431 9.1e-100
TAIR|locus:2042441490 GH9B10 "glycosyl hydrolase 9B1 0.839 0.897 0.437 1.5e-99
TAIR|locus:2042376491 GH9B9 "glycosyl hydrolase 9B9" 0.835 0.892 0.435 1.9e-99
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.837 0.916 0.421 9.4e-98
TAIR|locus:2042461492 GH9B12 "glycosyl hydrolase 9B1 0.832 0.886 0.424 1.5e-97
TAIR|locus:2005599 GH9B7 "glycosyl hydrolase 9B7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1835 (651.0 bits), Expect = 2.6e-189, P = 2.6e-189
 Identities = 340/509 (66%), Positives = 400/509 (78%)

Query:     1 MGEKSKSKGCFGWFXXXXXXXXXXGAIVYTIK---KKTSHSDKXXXXXXXXXXXEKKYAE 57
             M EKSKS+G  GWF           A+VYT+K   KK+   D            +KKYA+
Sbjct:     1 MEEKSKSRGWCGWFIAIIVLASVILAVVYTVKLRTKKSGDDDGGGPVPGPPGAIDKKYAD 60

Query:    58 ALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFT 117
             ALK+A+QFFD+QKSGKL NNKI WRGDS LKDG +  LDL+KG+YDAGDH+KFGFPMAFT
Sbjct:    61 ALKLALQFFDIQKSGKLENNKIPWRGDSGLKDGSEDNLDLSKGLYDAGDHIKFGFPMAFT 120

Query:   118 ATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWE 177
             ATVLSW+ILEYGDQM+ V+QL PA+DSL+WITDYLI AHP +NVL +QVG+P  DH CWE
Sbjct:   121 ATVLSWSILEYGDQMNAVNQLDPAKDSLRWITDYLIKAHPSDNVLYIQVGDPKVDHPCWE 180

Query:   178 RPESMAEERPLTQVNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQLFNFA 237
             RPE M E+RPLT+++   PG               LVFK SD TYS++LLKHA+QLFNFA
Sbjct:   181 RPEDMKEKRPLTKIDVDTPGTEVAAETAAAMASASLVFKDSDPTYSATLLKHAKQLFNFA 240

Query:   238 DNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGS 297
             D  RGSYSV+IP+VQ FYNSTGYGDELLWAASWLYHAT D +YL YVS  +GK+FA++G+
Sbjct:   241 DTKRGSYSVNIPEVQKFYNSTGYGDELLWAASWLYHATEDKTYLDYVSN-HGKEFASFGN 299

Query:   298 PSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRT 357
             P+WFSWDNKLAGTQVLLSRL FF  KD+SG+ GL  YR TA+AVMCGLLPKSPT+T SRT
Sbjct:   300 PTWFSWDNKLAGTQVLLSRLLFFK-KDLSGSKGLGNYRNTAKAVMCGLLPKSPTSTASRT 358

Query:   358 ESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADY 417
               GLIWVSEWNS+Q  V+SAFLA+++SDYMLTSR  +++CDG  FK ++LRDFAK QADY
Sbjct:   359 NGGLIWVSEWNSMQQSVSSAFLASLFSDYMLTSRIHKISCDGKIFKATELRDFAKSQADY 418

Query:   418 ILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLV 477
             +LG NPL  SF+VGYG KYPQ+VHHRGASIPADATTGC DGFKW +S KPNPN+A G LV
Sbjct:   419 MLGKNPLGTSFVVGYGDKYPQFVHHRGASIPADATTGCLDGFKWFNSTKPNPNIAYGALV 478

Query:   478 GGPFLNETYIDSRNNSMQAEPSTYNGAVI 506
             GGPF NET+ DSR N MQ EP+TYN A++
Sbjct:   479 GGPFFNETFTDSRENPMQNEPTTYNNALL 507
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0000271 "polysaccharide biosynthetic process" evidence=RCA
GO:0000272 "polysaccharide catabolic process" evidence=RCA
GO:0005982 "starch metabolic process" evidence=RCA
GO:0006084 "acetyl-CoA metabolic process" evidence=RCA
GO:0007389 "pattern specification process" evidence=RCA
GO:0008361 "regulation of cell size" evidence=RCA
GO:0009664 "plant-type cell wall organization" evidence=RCA
GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA
GO:0009825 "multidimensional cell growth" evidence=RCA
GO:0009832 "plant-type cell wall biogenesis" evidence=RCA
GO:0009926 "auxin polar transport" evidence=RCA
GO:0009932 "cell tip growth" evidence=RCA
GO:0010015 "root morphogenesis" evidence=RCA
GO:0010075 "regulation of meristem growth" evidence=RCA
GO:0010817 "regulation of hormone levels" evidence=RCA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
GO:0040007 "growth" evidence=RCA
GO:0042546 "cell wall biogenesis" evidence=RCA
GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA
GO:0048653 "anther development" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2035384 GH9B5 "glycosyl hydrolase 9B5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028441 GH9C1 "glycosyl hydrolase 9C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042441 GH9B10 "glycosyl hydrolase 9B10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042376 GH9B9 "glycosyl hydrolase 9B9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042461 GH9B12 "glycosyl hydrolase 9B12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q69SG5GUN24_ORYSJ3, ., 2, ., 1, ., 40.66220.99040.9829yesno
Q8LCP6GUN10_ARATH3, ., 2, ., 1, ., 40.72240.99420.9923yesno
Q9FXI9GUN2_ARATH3, ., 2, ., 1, ., 40.71540.92170.9378nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00014445001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (525 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query524
PLN02345469 PLN02345, PLN02345, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 1e-178
PLN02340 614 PLN02340, PLN02340, endoglucanase 1e-170
PLN00119489 PLN00119, PLN00119, endoglucanase 1e-162
PLN02171 629 PLN02171, PLN02171, endoglucanase 1e-159
PLN02266510 PLN02266, PLN02266, endoglucanase 1e-151
PLN02613498 PLN02613, PLN02613, endoglucanase 1e-151
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-149
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-137
PLN02308492 PLN02308, PLN02308, endoglucanase 1e-135
PLN03009495 PLN03009, PLN03009, cellulase 1e-131
PLN02175484 PLN02175, PLN02175, endoglucanase 1e-125
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information 
 Score =  938 bits (2426), Expect = 0.0
 Identities = 368/469 (78%), Positives = 418/469 (89%), Gaps = 2/469 (0%)

Query: 58  ALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFT 117
           ALK+A+QFFD+QKSGKL NN I WRGDSAL DG D GLDL+KGMYDAGDHMKFGFPMAFT
Sbjct: 1   ALKIALQFFDIQKSGKLENNPIPWRGDSALLDGSDAGLDLSKGMYDAGDHMKFGFPMAFT 60

Query: 118 ATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWE 177
           ATVLSW+ILEYGDQM+  +QL  A+DSLKWITDYLI+AHP ENVL +QVG+P  DHKCWE
Sbjct: 61  ATVLSWSILEYGDQMNAANQLDSAKDSLKWITDYLINAHPSENVLYIQVGDPKLDHKCWE 120

Query: 178 RPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQLFNFA 237
           RPE+M E+RPLT++NTS PG+EVAAETAAAMA+ASLVFK SDSTYS +LLKHA+QLFNFA
Sbjct: 121 RPETMDEKRPLTKINTSSPGSEVAAETAAAMAAASLVFKSSDSTYSDTLLKHAKQLFNFA 180

Query: 238 DNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGS 297
           D +RGSYS SIP+VQ++YNSTGYGDELLWAASWLYHATGD +YL YV+GKNGK+FA+WGS
Sbjct: 181 DKYRGSYSESIPEVQDYYNSTGYGDELLWAASWLYHATGDKTYLAYVTGKNGKEFADWGS 240

Query: 298 PSWFSWDNKLAGTQVLLSRLSFFSGKDIS--GNSGLRMYRKTAEAVMCGLLPKSPTATTS 355
           P+WFSWD+KLAGTQVLLSRL+FF  K  S   NSGL+MY+KTAEAVMCGLLP SPTATTS
Sbjct: 241 PTWFSWDDKLAGTQVLLSRLTFFGPKGASNTVNSGLQMYKKTAEAVMCGLLPDSPTATTS 300

Query: 356 RTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQA 415
           RT+ GLIWVSEWN+LQH V SAFLA +YSDYML+S  A+L+C G SFKPSDLR FAK QA
Sbjct: 301 RTDGGLIWVSEWNALQHAVNSAFLAVLYSDYMLSSGIAKLSCSGKSFKPSDLRKFAKSQA 360

Query: 416 DYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGG 475
           DYILG NP+KMS+LVGYG KYPQYVHHRGASIPADA TGC+DGFKWL S +PNPNVA G 
Sbjct: 361 DYILGKNPMKMSYLVGYGDKYPQYVHHRGASIPADAKTGCKDGFKWLHSSEPNPNVATGA 420

Query: 476 LVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVTTSSAVQSFT 524
           LVGGPF N+T++DSR+NSMQ EP+TYN A++VGLLSSLVTTSS +QSFT
Sbjct: 421 LVGGPFQNDTFVDSRDNSMQNEPTTYNSALLVGLLSSLVTTSSVLQSFT 469

Length = 469
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 524
PLN02345469 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN03009495 cellulase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd0285086 Cellulase_N_term Cellulase N-terminus domain. Cell 97.67
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.24
COG1331667 Highly conserved protein containing a thioredoxin 96.99
PF0292791 CelD_N: N-terminal ig-like domain of cellulase; In 96.44
KOG2787403 consensus Lanthionine synthetase C-like protein 1 95.18
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 94.45
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 94.09
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 92.85
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 84.74
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 84.64
>PLN02345 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=2.5e-119  Score=953.81  Aligned_cols=466  Identities=79%  Similarity=1.304  Sum_probs=429.4

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCcccccccccccCCCcccccchHHHHHHHHHHHHHhhhhcccCCC
Q 009846           58 ALKVAMQFFDVQKSGKLVNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQ  137 (524)
Q Consensus        58 ~l~~sl~ff~~QR~G~~~~~~~~w~~~~~l~dg~~~~~Dl~GGW~DAGD~~Ky~~~~a~s~~~L~w~~~ef~~~~~~~~~  137 (524)
                      +|++||+||++||||.+++++++||++||+.||.+.++||+|||||||||+||++|+++++++|+|+++||++.+++.++
T Consensus         1 aL~~sl~Fy~aQrsG~l~~~~~~Wrgds~l~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~t~L~w~~~e~~~~~~~~~~   80 (469)
T PLN02345          1 ALKIALQFFDIQKSGKLENNPIPWRGDSALLDGSDAGLDLSKGMYDAGDHMKFGFPMAFTATVLSWSILEYGDQMNAANQ   80 (469)
T ss_pred             CHHHHHHHHHHhcCCCCccCCCCccccccccccccccCcCCCCceeCCCCceeCchhHHHHHHHHHHHHHhhhhhhcccc
Confidence            48999999999999999888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHhHHHHHHhhccCCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCccHHHHHHHHHHHHHhcccccc
Q 009846          138 LQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKK  217 (524)
Q Consensus       138 ~~dlldE~kwg~D~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~As~v~~~  217 (524)
                      +|+||||||||+|||||||+.+|+||+|||++..||.+|++||+++.+|+++.++.++|||++++++|||||+||||||+
T Consensus        81 ~~~~ldelkw~~Dyllk~~~~~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~~~~~~pgsd~a~~~AAAlA~as~vfk~  160 (469)
T PLN02345         81 LDSAKDSLKWITDYLINAHPSENVLYIQVGDPKLDHKCWERPETMDEKRPLTKINTSSPGSEVAAETAAAMAAASLVFKS  160 (469)
T ss_pred             hHHHHHHHhHHHHHHHHhcCCCCeEEEEecCCCCCcccCCChhhcCCcceEEecCCCCCCcHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999998999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccccCCCCCCcHHHHHHHHHHHHhCChhHHHHHHccCCCCCcCCCC
Q 009846          218 SDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGS  297 (524)
Q Consensus       218 ~d~~~A~~~l~~A~~~~~~a~~~~~~~~~~~~~~~~~Y~~~~~~De~~wAA~eLy~aTg~~~Y~~~~~~~~~~~~~~~~~  297 (524)
                      +||+||++||++||++|+||+++|+.|....+..+++|+++++.||++|||+|||++|||++|+++++......+..+..
T Consensus       161 ~D~~YA~~lL~~Ak~ly~fa~~~~g~y~~~~~~~~~~Y~s~~~~DEl~WAAawLy~ATgd~~Yl~~~~~~~~~~~~~~~~  240 (469)
T PLN02345        161 SDSTYSDTLLKHAKQLFNFADKYRGSYSESIPEVQDYYNSTGYGDELLWAASWLYHATGDKTYLAYVTGKNGKEFADWGS  240 (469)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCccCCCCCCcccccHHHHHHHHHHHHhCCHHHHHHHHhhhhhhhcccCC
Confidence            99999999999999999999999999987767667899999999999999999999999999999996332212333334


Q ss_pred             CCccccchhhHHHHHHhccccccCCCC---CcchhHHHHHHHHHHHHHHhhCCCCCCCccccCCCCceeecCCCcccHHH
Q 009846          298 PSWFSWDNKLAGTQVLLSRLSFFSGKD---ISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQHPV  374 (524)
Q Consensus       298 ~~~~~W~~~~~~~~~lla~~~~~~~~~---~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~wg~~~~~~  374 (524)
                      ...|+||+|.+|+++||+++.+. +.+   ......+..|++.++.++|.+++++++..+.+||+||+|.++|+++||++
T Consensus       241 ~~~~~WD~k~~g~~~lla~~~~~-~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~TpgGl~~~~~wgslrya~  319 (469)
T PLN02345        241 PTWFSWDDKLAGTQVLLSRLTFF-GPKGASNTVNSGLQMYKKTAEAVMCGLLPDSPTATTSRTDGGLIWVSEWNALQHAV  319 (469)
T ss_pred             CceecCcchHHHHHHHHHHHhhc-cCccccchhhHHHHHHHHHHHHHHHHhcCCCCCccccccCCeeEEeCCCchHHHHH
Confidence            56799999999999999887543 211   11234678999999999999998877667899999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcccccccCCCCCChhHHHHHHHhhchhccCCCCCCCeeEEeeCCCCCCCcCCCCCCCCCCCCCC
Q 009846          375 ASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTG  454 (524)
Q Consensus       375 n~a~l~~~ya~~l~~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~~~~~~~  454 (524)
                      +++||+++|++++.+..++.+.|++...+.++|+++|++|||||||+||+++|||||||.|+|++||||+||||.+.+++
T Consensus       320 ~~afla~vya~~l~~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP~~~SYvVGfG~n~P~~pHHR~As~p~~~~~~  399 (469)
T PLN02345        320 NSAFLAVLYSDYMLSSGIAKLSCSGKSFKPSDLRKFAKSQADYILGKNPMKMSYLVGYGDKYPQYVHHRGASIPADAKTG  399 (469)
T ss_pred             HHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHHHHHHHHHHHHhcCCCCCcceEeecCCCCCCCcccccCCCCCCCCcC
Confidence            99999999999884444467899888889999999999999999999999999999999999999999999999877889


Q ss_pred             CCCCCcccCCCCCCCCCcccccccCCCCCCcccccCCccccccccccCccHHHHHHHHhhccCcccCCCC
Q 009846          455 CRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVTTSSAVQSFT  524 (524)
Q Consensus       455 c~~g~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~~~~~nE~aid~NA~lv~~la~l~~~~~~~~~~~  524 (524)
                      |++|++|+++|.||+|||.||||||||..|.|.|+|.+|++|||++++||+||++||+|+...+..||||
T Consensus       400 c~~g~~~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~y~nA~~vg~la~l~~~~~~~~~~~  469 (469)
T PLN02345        400 CKDGFKWLHSSEPNPNVATGALVGGPFQNDTFVDSRDNSMQNEPTTYNSALLVGLLSSLVTTSSVLQSFT  469 (469)
T ss_pred             CCCCcccccCCCCCCceeccceecCCCccCCccccccccccccceeehhhHHHHHHHHHhcCCCcccCCC
Confidence            9999999999999999999999999999999999999999999999888999999999998888888886

>PLN02266 endoglucanase Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02850 Cellulase_N_term Cellulase N-terminus domain Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF02927 CelD_N: N-terminal ig-like domain of cellulase; InterPro: IPR004197 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query524
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 2e-80
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 8e-77
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 2e-68
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 1e-64
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 2e-59
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 2e-59
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 1e-56
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 2e-46
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 2e-09
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  296 bits (758), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 171/448 (38%), Positives = 248/448 (55%), Gaps = 39/448 (8%)
Query: 55  YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFP 113
           Y + L+ ++ F++ Q+SG+L  + K++WR DSAL D  D G DLT G +DAGD +KFGFP
Sbjct: 5   YKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFP 64
Query: 114 MAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDH 173
           MA+TATVL+W ++++         L   + ++KW TDY I AH  +N    QVG  D DH
Sbjct: 65  MAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADH 124
Query: 174 KCWERPESMAEERPLTQVNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQL 233
             W RPE M   RP  +++TS PG               +VF+  D TYS++LL HA+QL
Sbjct: 125 AFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQL 184
Query: 234 FNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGK-DF 292
           F+FA+N+RG YS SI   +NFY S  Y DEL+WAA+WLY AT D++YL        +   
Sbjct: 185 FDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAESLYDEFGL 244
Query: 293 ANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTA 352
            NWG     +WD+K++G QVLL++L           +  + Y+ T ++ +  L+      
Sbjct: 245 QNWGGG--LNWDSKVSGVQVLLAKL-----------TNKQAYKDTVQSYVNYLINNQ--- 288
Query: 353 TTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAK 412
              +T  GL+++  W +L+H   +AF+       ML +  AEL     S+     R FA+
Sbjct: 289 --QKTPKGLLYIDMWGTLRHAANAAFI-------MLEA--AELGLSASSY-----RQFAQ 332
Query: 413 DQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVA 472
            Q DY LG+     SF+ G+G   P   HHR +S P    T   + F   +S  PN +V 
Sbjct: 333 TQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPAPATCDWNTF---NSPDPNYHVL 387
Query: 473 VGGLVGGPFLNETYIDSRNNSMQAEPST 500
            G LVGGP  N+ Y+D R++ +  E +T
Sbjct: 388 SGALVGGPDQNDNYVDDRSDYVHNEVAT 415
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query524
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-169
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-165
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-162
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-162
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-161
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-159
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-144
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-138
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-126
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 4e-73
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-04
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
 Score =  484 bits (1247), Expect = e-169
 Identities = 176/461 (38%), Positives = 260/461 (56%), Gaps = 37/461 (8%)

Query: 55  YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFP 113
           Y + L+ ++ F++ Q+SG+L  + K++WR DSAL D  D G DLT G +DAGD +KFGFP
Sbjct: 5   YKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFP 64

Query: 114 MAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDH 173
           MA+TATVL+W ++++         L   + ++KW TDY I AH  +N    QVG  D DH
Sbjct: 65  MAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADH 124

Query: 174 KCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQL 233
             W RPE M   RP  +++TS PG+++A ETAAA+A+AS+VF+  D TYS++LL HA+QL
Sbjct: 125 AFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQL 184

Query: 234 FNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFA 293
           F+FA+N+RG YS SI   +NFY S  Y DEL+WAA+WLY AT D++YL         +F 
Sbjct: 185 FDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAE-SLYDEFG 243

Query: 294 NWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTAT 353
                   +WD+K++G QVLL++L           +  + Y+ T ++ +  L+       
Sbjct: 244 LQNWGGGLNWDSKVSGVQVLLAKL-----------TNKQAYKDTVQSYVNYLINNQQ--- 289

Query: 354 TSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKD 413
             +T  GL+++  W +L+H   +AF+    ++                   S  R FA+ 
Sbjct: 290 --KTPKGLLYIDMWGTLRHAANAAFIMLEAAELG--------------LSASSYRQFAQT 333

Query: 414 QADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAV 473
           Q DY LG+     SF+ G+G   P   HHR +S P    T     +   +S  PN +V  
Sbjct: 334 QIDYALGDGG--RSFVCGFGSNPPTRPHHRSSSCPPAPATC---DWNTFNSPDPNYHVLS 388

Query: 474 GGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLV 514
           G LVGGP  N+ Y+D R++ +  E +T   A     L++LV
Sbjct: 389 GALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALV 429
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query524
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3k4z_A289 Glycoside hydrolase family 9; cellulase, CBHA, CBM 97.03
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.34
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.11
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 95.43
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 95.3
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 92.45
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 92.12
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 91.01
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 89.78
3k11_A445 Putative glycosyl hydrolase; structural genomics, 89.62
1nc5_A373 Hypothetical protein YTER; structural genomics, he 88.75
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 88.72
3pmm_A382 Putative cytoplasmic protein; structural genomics, 88.7
3k11_A445 Putative glycosyl hydrolase; structural genomics, 83.6
1nc5_A373 Hypothetical protein YTER; structural genomics, he 81.96
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 81.73
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 80.54
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
Probab=100.00  E-value=4.9e-110  Score=886.87  Aligned_cols=428  Identities=42%  Similarity=0.748  Sum_probs=389.8

Q ss_pred             HhHHHHHHHHHHHHHHhhcCCC-CCCCCCCCCCCCCCCCCCCcccccccccccCCCcccccchHHHHHHHHHHHHHhhhh
Q 009846           53 KKYAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQ  131 (524)
Q Consensus        53 ~~y~~~l~~sl~ff~~QR~G~~-~~~~~~w~~~~~l~dg~~~~~Dl~GGW~DAGD~~Ky~~~~a~s~~~L~w~~~ef~~~  131 (524)
                      .+|.++|++||+||++||||.+ ++++++||+++|+.||.+.++||+|||||||||+||++|+++++++|+|+++||++.
T Consensus         3 ~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~   82 (433)
T 1ks8_A            3 YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEAG   82 (433)
T ss_dssp             CCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHHH
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHHh
Confidence            4799999999999999999988 689999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCChhhHHHHHhHHHHHHhhccCCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCccHHHHHHHHHHHHHh
Q 009846          132 MDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASA  211 (524)
Q Consensus       132 ~~~~~~~~dlldE~kwg~D~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~A  211 (524)
                      +++++++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++|.++.++|+|++++++|||||+|
T Consensus        83 ~~~~~~~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~a  162 (433)
T 1ks8_A           83 YSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAA  162 (433)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHH
T ss_pred             hhcCCchHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999899999999999999999999988899999999999999999


Q ss_pred             ccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccccCCCCCCcHHHHHHHHHHHHhCChhHHHHHHccCCCC
Q 009846          212 SLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKD  291 (524)
Q Consensus       212 s~v~~~~d~~~A~~~l~~A~~~~~~a~~~~~~~~~~~~~~~~~Y~~~~~~De~~wAA~eLy~aTg~~~Y~~~~~~~~~~~  291 (524)
                      |||||++||+||++||++||++|+||+++|+.|.++++..+++|+++++.||++|||+|||++|||++|+++++++.. .
T Consensus       163 s~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~-~  241 (433)
T 1ks8_A          163 SIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAESLYD-E  241 (433)
T ss_dssp             HHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-H
T ss_pred             HHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHH-h
Confidence            999999999999999999999999999999998877776789999999999999999999999999999999988653 2


Q ss_pred             CcCCCCCCccccchhhHHHHHHhccccccCCCCCcchhHHHHHHHHHHHHHHhhCCCCCCCccccCCCCceeecCCCccc
Q 009846          292 FANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQ  371 (524)
Q Consensus       292 ~~~~~~~~~~~W~~~~~~~~~lla~~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~wg~~~  371 (524)
                      ++.......|+|+++.++++++|+++  + +.        +.|++.++.+++.++.     .+.+||+|+.|...||+++
T Consensus       242 ~~~~~~~~~~~Wd~~~~g~~~lla~~--~-~~--------~~~~~~~~~~~~~~~~-----~~~~tp~Gl~~~~~WGs~~  305 (433)
T 1ks8_A          242 FGLQNWGGGLNWDSKVSGVQVLLAKL--T-NK--------QAYKDTVQSYVNYLIN-----NQQKTPKGLLYIDMWGTLR  305 (433)
T ss_dssp             TTGGGSCCCCCSSCCHHHHHHHHHHH--H-CC--------HHHHHHHHHHHHHHHH-----TSCBCTTSCBCCCSTTHHH
T ss_pred             cCcCcCcCCcCccchhhHHHHHHhhc--c-Ch--------HHHHHHHHHHHHHHHh-----cCCcCCCCceeecCCchhH
Confidence            32222346799999999999888764  2 21        4566666776666653     3467899999988999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcccccccCCCCCChhHHHHHHHhhchhccCCCCCCCeeEEeeCCCCCCCcCCCCCCCCCCC
Q 009846          372 HPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADA  451 (524)
Q Consensus       372 ~~~n~a~l~~~ya~~l~~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~~~~  451 (524)
                      |++|.+|++++++++.              +++.+|+++|++|||||||+|  ++|||||||+|+|++||||+++||. .
T Consensus       306 ~~~n~a~l~~~~~~~~--------------~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p~~pHHR~s~~~~-~  368 (433)
T 1ks8_A          306 HAANAAFIMLEAAELG--------------LSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPP-A  368 (433)
T ss_dssp             HHHHHHHHHHHHHHTT--------------SSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHCCC-T
T ss_pred             HHHHHHHHHHHHHhcC--------------CCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCCCCCcchhhcCCC-c
Confidence            9999999999998751              367899999999999999998  7899999999999999999999986 3


Q ss_pred             CCCCCCCCcccCCCCCCCCCcccccccCCCCCCcccccCCccccccccccCccHHHHHHHHhhcc
Q 009846          452 TTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVTT  516 (524)
Q Consensus       452 ~~~c~~g~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~~~~~nE~aid~NA~lv~~la~l~~~  516 (524)
                      +.+|+.  ..+++|.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|.+.
T Consensus       369 ~~~c~~--~~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~  431 (433)
T 1ks8_A          369 PATCDW--NTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL  431 (433)
T ss_dssp             TSCCSH--HHHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccccc--cccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHhc
Confidence            568864  458899999999999999999999999999999999999999999999999999865
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3k4z_A Glycoside hydrolase family 9; cellulase, CBHA, CBM4, IG-like, cellulosome, CBM, sugar binding protein; HET: CBI XGP; 2.11A {Clostridium thermocellum dsm 4150} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 524
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-158
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-151
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-151
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-145
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-114
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-112
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  456 bits (1175), Expect = e-158
 Identities = 182/467 (38%), Positives = 253/467 (54%), Gaps = 38/467 (8%)

Query: 55  YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFP 113
           YAEAL+ +M F++ Q+SGKL  NN++SWRGDS L DG D+GLDLT G YDAGDH+KFGFP
Sbjct: 6   YAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFP 65

Query: 114 MAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDH 173
           MAFTAT+L+W  +E  +      Q+   +D+L+W+ DY I AHP  NVL VQVG+ D DH
Sbjct: 66  MAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADH 125

Query: 174 KCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASASLVFKKSDSTYSSSLLKHAQQL 233
           K W   E M  ERP  +V+ S PG++VAAETAAAMA++S+VF   D  Y+++L++HA+QL
Sbjct: 126 KWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQL 185

Query: 234 FNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYV-----SGKN 288
           + FAD +RG YS  +P    + + +GY DEL+W A WLY ATGD SYL            
Sbjct: 186 YTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFLST 245

Query: 289 GKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPK 348
            +           +WD+K  GT VLL++            +G + Y   A   +      
Sbjct: 246 EQQTDLRSYRWTIAWDDKSYGTYVLLAKE-----------TGKQKYIDDANRWLDYWTVG 294

Query: 349 SPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLR 408
                   +  G+  +  W +L++   +AF+A VY+  +               +     
Sbjct: 295 VNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVI-----------DDPVRKQRYH 343

Query: 409 DFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPN 468
           DFA  Q +Y LG+NP   S++VG+G   P+  HHR A                + S   N
Sbjct: 344 DFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWT---------DSIASPAEN 394

Query: 469 PNVAVGGLVGGPF-LNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLV 514
            +V  G LVGGP   N+ Y D R + +  E +T   A     L+ LV
Sbjct: 395 RHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLV 441
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query524
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d1clca2100 CelD cellulase, N-terminal domain {Clostridium the 97.56
d1ut9a298 Cellulose 1,4-beta-cellobiosidase CbhA, precatalyt 97.54
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 92.34
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 90.56
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 86.76
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 82.35
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 81.71
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=7.9e-103  Score=837.75  Aligned_cols=434  Identities=42%  Similarity=0.687  Sum_probs=380.1

Q ss_pred             HhHHHHHHHHHHHHHHhhcCCC-CCCCCCCCCCCCCCCCCCCcccccccccccCCCcccccchHHHHHHHHHHHHHhhhh
Q 009846           53 KKYAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQ  131 (524)
Q Consensus        53 ~~y~~~l~~sl~ff~~QR~G~~-~~~~~~w~~~~~l~dg~~~~~Dl~GGW~DAGD~~Ky~~~~a~s~~~L~w~~~ef~~~  131 (524)
                      .+|.++|+++|+||++||||.+ +.++++||++||+.||.+.++||+|||||||||+||++++++++++|+|++++|++.
T Consensus         4 ~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~~~   83 (460)
T d1tf4a1           4 FNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPEG   83 (460)
T ss_dssp             SCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHHH
T ss_pred             CCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHChHh
Confidence            4799999999999999999988 778999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCChhhHHHHHhHHHHHHhhccCCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceEEcCCCCccHHHHHHHHHHHHHh
Q 009846          132 MDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGTEVAAETAAAMASA  211 (524)
Q Consensus       132 ~~~~~~~~dlldE~kwg~D~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~A  211 (524)
                      ++++|++||||||+|||+|||||||+++|.||+|||++..||+.|++|+.++.+|+.+.+..+.|+|++++.+|||||+|
T Consensus        84 ~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA~a  163 (460)
T d1tf4a1          84 YIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAAS  163 (460)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHH
T ss_pred             hhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988899888877789999999999999999


Q ss_pred             ccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccccCCCCCCcHHHHHHHHHHHHhCChhHHHHHHccCCCC
Q 009846          212 SLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKD  291 (524)
Q Consensus       212 s~v~~~~d~~~A~~~l~~A~~~~~~a~~~~~~~~~~~~~~~~~Y~~~~~~De~~wAA~eLy~aTg~~~Y~~~~~~~~~~~  291 (524)
                      ||||+++||+||++||++|+++|+||+++|+.|.+..+....+|.++++.||++|||+|||++|||++|+++++.... .
T Consensus       164 s~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~~-~  242 (460)
T d1tf4a1         164 SIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYD-F  242 (460)
T ss_dssp             HHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHGG-G
T ss_pred             HHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCcCCCccccchHHHHHHHHHHHHhCCHHHHHHHHHHhh-h
Confidence            999999999999999999999999999999998776655555677788999999999999999999999999987643 1


Q ss_pred             Cc------CCCCCCccccchhhHHHHHHhccccccCCCCCcchhHHHHHHHHHHHHHHhhCCCCCCCccccCCCCceeec
Q 009846          292 FA------NWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVS  365 (524)
Q Consensus       292 ~~------~~~~~~~~~W~~~~~~~~~lla~~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~  365 (524)
                      +.      .......++|+++..+..+++++..   ..        ..++..++.+++.+........++++++++.|..
T Consensus       243 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~---~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (460)
T d1tf4a1         243 LSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET---GK--------QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLD  311 (460)
T ss_dssp             SCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH---CC--------HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCC
T ss_pred             cccccccccccccccccccchhHHHHHHHHHHh---hh--------hHHHHHHHHHHHHHhhhcccccCCcCCCcceecC
Confidence            11      1112346789998888777765431   11        3455566666665554433235678889999999


Q ss_pred             CCCcccHHHHHHHHHHHHHHHHhhhcccccccCCCCCChhHHHHHHHhhchhccCCCCCCCeeEEeeCCCCCCCcCCCCC
Q 009846          366 EWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGA  445 (524)
Q Consensus       366 ~wg~~~~~~n~a~l~~~ya~~l~~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyVtG~G~~~p~~pHHR~s  445 (524)
                      .||++++++|.+|+++++++++ .+          .+++++|+++|++|||||||+||+++|||||+|.|+|++||||.+
T Consensus       312 ~WGsn~~~~n~a~~~~~a~~~~-~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s  380 (460)
T d1tf4a1         312 TWGALRYAANTAFVALVYAKVI-DD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTA  380 (460)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHC-CC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHh-cc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccc
Confidence            9999999999999999998864 10          124579999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCcccCCCCCCCCCcccccccCCC-CCCcccccCCccccccccccCccHHHHHHHHhhccCc
Q 009846          446 SIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPF-LNETYIDSRNNSMQAEPSTYNGAVIVGLLSSLVTTSS  518 (524)
Q Consensus       446 ~~~~~~~~~c~~g~~~~~~~~pn~~~~~GalvGGPn-~~~~y~D~~~~~~~nE~aid~NA~lv~~la~l~~~~~  518 (524)
                      +++.         ..++..|.||+++|||+|||||| ..+||+|++++|++|||||||||+||++||+|++..+
T Consensus       381 ~~~~---------~~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~  445 (460)
T d1tf4a1         381 HGSW---------TDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYG  445 (460)
T ss_dssp             HTCS---------SSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHC
T ss_pred             cCCC---------ccccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhcC
Confidence            7653         13456788999999999999999 5799999999999999999999999999999988744
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1clca2 b.1.18.2 (A:35-134) CelD cellulase, N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a2 b.1.18.2 (A:208-305) Cellulose 1,4-beta-cellobiosidase CbhA, precatalytic domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure